###################################
1962 groups of orthologs
2108 in-paralogs from A.capsulata
2285 in-paralogs from P.pallidum
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 3968 bits
Score difference with first non-orthologous sequence - A.capsulata:3968 P.pallidum:3968

C0NFT4              	100.00%		D3BP40              	100.00%
Bootstrap support for C0NFT4 as seed ortholog is 100%.
Bootstrap support for D3BP40 as seed ortholog is 100%.

Group of orthologs #2. Best score 3082 bits
Score difference with first non-orthologous sequence - A.capsulata:3082 P.pallidum:3082

C0NBJ8              	100.00%		D3BFM8              	100.00%
Bootstrap support for C0NBJ8 as seed ortholog is 100%.
Bootstrap support for D3BFM8 as seed ortholog is 100%.

Group of orthologs #3. Best score 2189 bits
Score difference with first non-orthologous sequence - A.capsulata:2189 P.pallidum:2189

C0NVC4              	100.00%		D3BLH3              	100.00%
Bootstrap support for C0NVC4 as seed ortholog is 100%.
Bootstrap support for D3BLH3 as seed ortholog is 100%.

Group of orthologs #4. Best score 2174 bits
Score difference with first non-orthologous sequence - A.capsulata:2174 P.pallidum:2174

C0NSX2              	100.00%		D3BB35              	100.00%
Bootstrap support for C0NSX2 as seed ortholog is 100%.
Bootstrap support for D3BB35 as seed ortholog is 100%.

Group of orthologs #5. Best score 1953 bits
Score difference with first non-orthologous sequence - A.capsulata:1953 P.pallidum:1953

C0NDA2              	100.00%		D3B0N0              	100.00%
Bootstrap support for C0NDA2 as seed ortholog is 100%.
Bootstrap support for D3B0N0 as seed ortholog is 100%.

Group of orthologs #6. Best score 1833 bits
Score difference with first non-orthologous sequence - A.capsulata:1833 P.pallidum:1833

C0NG17              	100.00%		D3BVM0              	100.00%
Bootstrap support for C0NG17 as seed ortholog is 100%.
Bootstrap support for D3BVM0 as seed ortholog is 100%.

Group of orthologs #7. Best score 1715 bits
Score difference with first non-orthologous sequence - A.capsulata:1715 P.pallidum:1715

C0NM24              	100.00%		D3BI99              	100.00%
Bootstrap support for C0NM24 as seed ortholog is 100%.
Bootstrap support for D3BI99 as seed ortholog is 100%.

Group of orthologs #8. Best score 1542 bits
Score difference with first non-orthologous sequence - A.capsulata:1542 P.pallidum:1542

C0NAF9              	100.00%		D3BNB1              	100.00%
Bootstrap support for C0NAF9 as seed ortholog is 100%.
Bootstrap support for D3BNB1 as seed ortholog is 100%.

Group of orthologs #9. Best score 1540 bits
Score difference with first non-orthologous sequence - A.capsulata:1540 P.pallidum:1540

C0NGR3              	100.00%		D3BMV7              	100.00%
Bootstrap support for C0NGR3 as seed ortholog is 100%.
Bootstrap support for D3BMV7 as seed ortholog is 100%.

Group of orthologs #10. Best score 1539 bits
Score difference with first non-orthologous sequence - A.capsulata:1539 P.pallidum:1539

C0NZ61              	100.00%		D3AVZ6              	100.00%
Bootstrap support for C0NZ61 as seed ortholog is 100%.
Bootstrap support for D3AVZ6 as seed ortholog is 100%.

Group of orthologs #11. Best score 1323 bits
Score difference with first non-orthologous sequence - A.capsulata:1323 P.pallidum:1323

C0P0A1              	100.00%		D3B936              	100.00%
Bootstrap support for C0P0A1 as seed ortholog is 100%.
Bootstrap support for D3B936 as seed ortholog is 100%.

Group of orthologs #12. Best score 1292 bits
Score difference with first non-orthologous sequence - A.capsulata:1000 P.pallidum:1292

C0NGX6              	100.00%		D3BLR5              	100.00%
Bootstrap support for C0NGX6 as seed ortholog is 100%.
Bootstrap support for D3BLR5 as seed ortholog is 100%.

Group of orthologs #13. Best score 1274 bits
Score difference with first non-orthologous sequence - A.capsulata:1274 P.pallidum:1274

C0NZL8              	100.00%		D3BKC8              	100.00%
Bootstrap support for C0NZL8 as seed ortholog is 100%.
Bootstrap support for D3BKC8 as seed ortholog is 100%.

Group of orthologs #14. Best score 1263 bits
Score difference with first non-orthologous sequence - A.capsulata:876 P.pallidum:1263

C0NP73              	100.00%		D3AVT3              	100.00%
Bootstrap support for C0NP73 as seed ortholog is 100%.
Bootstrap support for D3AVT3 as seed ortholog is 100%.

Group of orthologs #15. Best score 1257 bits
Score difference with first non-orthologous sequence - A.capsulata:1257 P.pallidum:1257

C0NB61              	100.00%		D3BHD6              	100.00%
Bootstrap support for C0NB61 as seed ortholog is 100%.
Bootstrap support for D3BHD6 as seed ortholog is 100%.

Group of orthologs #16. Best score 1236 bits
Score difference with first non-orthologous sequence - A.capsulata:1236 P.pallidum:1236

C0NEY2              	100.00%		D3BJK4              	100.00%
Bootstrap support for C0NEY2 as seed ortholog is 100%.
Bootstrap support for D3BJK4 as seed ortholog is 100%.

Group of orthologs #17. Best score 1127 bits
Score difference with first non-orthologous sequence - A.capsulata:979 P.pallidum:324

C0NSN4              	100.00%		D3BU68              	100.00%
Bootstrap support for C0NSN4 as seed ortholog is 100%.
Bootstrap support for D3BU68 as seed ortholog is 100%.

Group of orthologs #18. Best score 1103 bits
Score difference with first non-orthologous sequence - A.capsulata:1103 P.pallidum:1103

C0NBR2              	100.00%		D3BBT9              	100.00%
Bootstrap support for C0NBR2 as seed ortholog is 100%.
Bootstrap support for D3BBT9 as seed ortholog is 100%.

Group of orthologs #19. Best score 1102 bits
Score difference with first non-orthologous sequence - A.capsulata:1102 P.pallidum:1102

C0NJY1              	100.00%		D3BKT1              	100.00%
C0P187              	17.15%		
Bootstrap support for C0NJY1 as seed ortholog is 100%.
Bootstrap support for D3BKT1 as seed ortholog is 100%.

Group of orthologs #20. Best score 1097 bits
Score difference with first non-orthologous sequence - A.capsulata:1097 P.pallidum:1097

C0NUA4              	100.00%		D3AYJ5              	100.00%
Bootstrap support for C0NUA4 as seed ortholog is 100%.
Bootstrap support for D3AYJ5 as seed ortholog is 100%.

Group of orthologs #21. Best score 1089 bits
Score difference with first non-orthologous sequence - A.capsulata:1089 P.pallidum:937

C0NL66              	100.00%		D3BUX1              	100.00%
Bootstrap support for C0NL66 as seed ortholog is 100%.
Bootstrap support for D3BUX1 as seed ortholog is 100%.

Group of orthologs #22. Best score 1069 bits
Score difference with first non-orthologous sequence - A.capsulata:1069 P.pallidum:1069

C0NZ30              	100.00%		D3AWX9              	100.00%
Bootstrap support for C0NZ30 as seed ortholog is 100%.
Bootstrap support for D3AWX9 as seed ortholog is 100%.

Group of orthologs #23. Best score 1053 bits
Score difference with first non-orthologous sequence - A.capsulata:228 P.pallidum:862

C0NH60              	100.00%		D3BTY9              	100.00%
Bootstrap support for C0NH60 as seed ortholog is 99%.
Bootstrap support for D3BTY9 as seed ortholog is 100%.

Group of orthologs #24. Best score 1046 bits
Score difference with first non-orthologous sequence - A.capsulata:1046 P.pallidum:1046

C0NIM9              	100.00%		D3BIF3              	100.00%
Bootstrap support for C0NIM9 as seed ortholog is 100%.
Bootstrap support for D3BIF3 as seed ortholog is 100%.

Group of orthologs #25. Best score 1032 bits
Score difference with first non-orthologous sequence - A.capsulata:1032 P.pallidum:450

C0NBN9              	100.00%		D3BB51              	100.00%
Bootstrap support for C0NBN9 as seed ortholog is 100%.
Bootstrap support for D3BB51 as seed ortholog is 100%.

Group of orthologs #26. Best score 1027 bits
Score difference with first non-orthologous sequence - A.capsulata:1027 P.pallidum:1027

C0NAX2              	100.00%		D3B3V5              	100.00%
Bootstrap support for C0NAX2 as seed ortholog is 100%.
Bootstrap support for D3B3V5 as seed ortholog is 100%.

Group of orthologs #27. Best score 1010 bits
Score difference with first non-orthologous sequence - A.capsulata:1010 P.pallidum:219

C0NX13              	100.00%		D3B7U7              	100.00%
Bootstrap support for C0NX13 as seed ortholog is 100%.
Bootstrap support for D3B7U7 as seed ortholog is 97%.

Group of orthologs #28. Best score 1001 bits
Score difference with first non-orthologous sequence - A.capsulata:1001 P.pallidum:1001

C0NL49              	100.00%		D3BS87              	100.00%
Bootstrap support for C0NL49 as seed ortholog is 100%.
Bootstrap support for D3BS87 as seed ortholog is 100%.

Group of orthologs #29. Best score 994 bits
Score difference with first non-orthologous sequence - A.capsulata:994 P.pallidum:994

C0NMV4              	100.00%		D3B599              	100.00%
Bootstrap support for C0NMV4 as seed ortholog is 100%.
Bootstrap support for D3B599 as seed ortholog is 100%.

Group of orthologs #30. Best score 993 bits
Score difference with first non-orthologous sequence - A.capsulata:80 P.pallidum:483

C0NZT3              	100.00%		D3BFY1              	100.00%
                    	       		D3B9U1              	42.31%
                    	       		D3BCU4              	41.64%
                    	       		D3BLW2              	38.92%
                    	       		D3BNU9              	34.67%
Bootstrap support for C0NZT3 as seed ortholog is 87%.
Bootstrap support for D3BFY1 as seed ortholog is 100%.

Group of orthologs #31. Best score 993 bits
Score difference with first non-orthologous sequence - A.capsulata:427 P.pallidum:410

C0NMC7              	100.00%		D3B6F6              	100.00%
Bootstrap support for C0NMC7 as seed ortholog is 100%.
Bootstrap support for D3B6F6 as seed ortholog is 100%.

Group of orthologs #32. Best score 992 bits
Score difference with first non-orthologous sequence - A.capsulata:284 P.pallidum:200

C0NDY5              	100.00%		D3B5K6              	100.00%
Bootstrap support for C0NDY5 as seed ortholog is 99%.
Bootstrap support for D3B5K6 as seed ortholog is 99%.

Group of orthologs #33. Best score 983 bits
Score difference with first non-orthologous sequence - A.capsulata:983 P.pallidum:983

C0NBD3              	100.00%		D3AWD9              	100.00%
Bootstrap support for C0NBD3 as seed ortholog is 100%.
Bootstrap support for D3AWD9 as seed ortholog is 100%.

Group of orthologs #34. Best score 970 bits
Score difference with first non-orthologous sequence - A.capsulata:970 P.pallidum:371

C0NPC9              	100.00%		D3BPX4              	100.00%
Bootstrap support for C0NPC9 as seed ortholog is 100%.
Bootstrap support for D3BPX4 as seed ortholog is 100%.

Group of orthologs #35. Best score 968 bits
Score difference with first non-orthologous sequence - A.capsulata:870 P.pallidum:500

C0NNR3              	100.00%		D3BFQ2              	100.00%
Bootstrap support for C0NNR3 as seed ortholog is 100%.
Bootstrap support for D3BFQ2 as seed ortholog is 100%.

Group of orthologs #36. Best score 957 bits
Score difference with first non-orthologous sequence - A.capsulata:957 P.pallidum:268

C0NJQ4              	100.00%		D3B6X4              	100.00%
Bootstrap support for C0NJQ4 as seed ortholog is 100%.
Bootstrap support for D3B6X4 as seed ortholog is 99%.

Group of orthologs #37. Best score 956 bits
Score difference with first non-orthologous sequence - A.capsulata:288 P.pallidum:610

C0NYC6              	100.00%		D3B545              	100.00%
                    	       		D3AVQ2              	43.58%
Bootstrap support for C0NYC6 as seed ortholog is 100%.
Bootstrap support for D3B545 as seed ortholog is 100%.

Group of orthologs #38. Best score 955 bits
Score difference with first non-orthologous sequence - A.capsulata:955 P.pallidum:456

C0P0L0              	100.00%		D3B0C6              	100.00%
Bootstrap support for C0P0L0 as seed ortholog is 100%.
Bootstrap support for D3B0C6 as seed ortholog is 100%.

Group of orthologs #39. Best score 953 bits
Score difference with first non-orthologous sequence - A.capsulata:953 P.pallidum:161

C0NMP6              	100.00%		D3BKB9              	100.00%
Bootstrap support for C0NMP6 as seed ortholog is 100%.
Bootstrap support for D3BKB9 as seed ortholog is 99%.

Group of orthologs #40. Best score 943 bits
Score difference with first non-orthologous sequence - A.capsulata:223 P.pallidum:237

C0NM04              	100.00%		D3BVP5              	100.00%
Bootstrap support for C0NM04 as seed ortholog is 99%.
Bootstrap support for D3BVP5 as seed ortholog is 99%.

Group of orthologs #41. Best score 929 bits
Score difference with first non-orthologous sequence - A.capsulata:929 P.pallidum:929

C0NQD3              	100.00%		D3AZS3              	100.00%
Bootstrap support for C0NQD3 as seed ortholog is 100%.
Bootstrap support for D3AZS3 as seed ortholog is 100%.

Group of orthologs #42. Best score 929 bits
Score difference with first non-orthologous sequence - A.capsulata:929 P.pallidum:708

C0NF61              	100.00%		D3BIX9              	100.00%
Bootstrap support for C0NF61 as seed ortholog is 100%.
Bootstrap support for D3BIX9 as seed ortholog is 100%.

Group of orthologs #43. Best score 911 bits
Score difference with first non-orthologous sequence - A.capsulata:911 P.pallidum:911

C0NSE6              	100.00%		D3B127              	100.00%
Bootstrap support for C0NSE6 as seed ortholog is 100%.
Bootstrap support for D3B127 as seed ortholog is 100%.

Group of orthologs #44. Best score 911 bits
Score difference with first non-orthologous sequence - A.capsulata:780 P.pallidum:911

C0NZC9              	100.00%		D3BDE5              	100.00%
Bootstrap support for C0NZC9 as seed ortholog is 100%.
Bootstrap support for D3BDE5 as seed ortholog is 100%.

Group of orthologs #45. Best score 903 bits
Score difference with first non-orthologous sequence - A.capsulata:531 P.pallidum:536

C0NHK8              	100.00%		D3B2A8              	100.00%
Bootstrap support for C0NHK8 as seed ortholog is 100%.
Bootstrap support for D3B2A8 as seed ortholog is 100%.

Group of orthologs #46. Best score 890 bits
Score difference with first non-orthologous sequence - A.capsulata:890 P.pallidum:890

C0NTC0              	100.00%		D3BK67              	100.00%
Bootstrap support for C0NTC0 as seed ortholog is 100%.
Bootstrap support for D3BK67 as seed ortholog is 100%.

Group of orthologs #47. Best score 881 bits
Score difference with first non-orthologous sequence - A.capsulata:881 P.pallidum:881

C0NRD2              	100.00%		D3AYA7              	100.00%
                    	       		D3BVE1              	7.28%
Bootstrap support for C0NRD2 as seed ortholog is 100%.
Bootstrap support for D3AYA7 as seed ortholog is 100%.

Group of orthologs #48. Best score 871 bits
Score difference with first non-orthologous sequence - A.capsulata:871 P.pallidum:871

C0NXC0              	100.00%		D3BD99              	100.00%
Bootstrap support for C0NXC0 as seed ortholog is 100%.
Bootstrap support for D3BD99 as seed ortholog is 100%.

Group of orthologs #49. Best score 869 bits
Score difference with first non-orthologous sequence - A.capsulata:869 P.pallidum:869

C0NC57              	100.00%		D3B5A9              	100.00%
Bootstrap support for C0NC57 as seed ortholog is 100%.
Bootstrap support for D3B5A9 as seed ortholog is 100%.

Group of orthologs #50. Best score 862 bits
Score difference with first non-orthologous sequence - A.capsulata:862 P.pallidum:862

C0NNJ3              	100.00%		D3B244              	100.00%
Bootstrap support for C0NNJ3 as seed ortholog is 100%.
Bootstrap support for D3B244 as seed ortholog is 100%.

Group of orthologs #51. Best score 852 bits
Score difference with first non-orthologous sequence - A.capsulata:424 P.pallidum:852

C0NN96              	100.00%		D3B1P3              	100.00%
Bootstrap support for C0NN96 as seed ortholog is 100%.
Bootstrap support for D3B1P3 as seed ortholog is 100%.

Group of orthologs #52. Best score 849 bits
Score difference with first non-orthologous sequence - A.capsulata:849 P.pallidum:849

C0ND02              	100.00%		D3BID1              	100.00%
Bootstrap support for C0ND02 as seed ortholog is 100%.
Bootstrap support for D3BID1 as seed ortholog is 100%.

Group of orthologs #53. Best score 847 bits
Score difference with first non-orthologous sequence - A.capsulata:847 P.pallidum:169

C0NG27              	100.00%		D3BPX3              	100.00%
Bootstrap support for C0NG27 as seed ortholog is 100%.
Bootstrap support for D3BPX3 as seed ortholog is 99%.

Group of orthologs #54. Best score 846 bits
Score difference with first non-orthologous sequence - A.capsulata:191 P.pallidum:607

C0NE10              	100.00%		D3BQN9              	100.00%
                    	       		D3B2N2              	63.53%
                    	       		D3BQP1              	43.57%
                    	       		D3B9D6              	23.39%
Bootstrap support for C0NE10 as seed ortholog is 99%.
Bootstrap support for D3BQN9 as seed ortholog is 100%.

Group of orthologs #55. Best score 844 bits
Score difference with first non-orthologous sequence - A.capsulata:844 P.pallidum:844

C0NKY1              	100.00%		D3BG38              	100.00%
Bootstrap support for C0NKY1 as seed ortholog is 100%.
Bootstrap support for D3BG38 as seed ortholog is 100%.

Group of orthologs #56. Best score 844 bits
Score difference with first non-orthologous sequence - A.capsulata:739 P.pallidum:844

C0NXJ3              	100.00%		D3BQ59              	100.00%
Bootstrap support for C0NXJ3 as seed ortholog is 100%.
Bootstrap support for D3BQ59 as seed ortholog is 100%.

Group of orthologs #57. Best score 828 bits
Score difference with first non-orthologous sequence - A.capsulata:828 P.pallidum:828

C0NKB7              	100.00%		D3BNJ7              	100.00%
Bootstrap support for C0NKB7 as seed ortholog is 100%.
Bootstrap support for D3BNJ7 as seed ortholog is 100%.

Group of orthologs #58. Best score 822 bits
Score difference with first non-orthologous sequence - A.capsulata:822 P.pallidum:822

C0NMA2              	100.00%		D3B7Q6              	100.00%
Bootstrap support for C0NMA2 as seed ortholog is 100%.
Bootstrap support for D3B7Q6 as seed ortholog is 100%.

Group of orthologs #59. Best score 820 bits
Score difference with first non-orthologous sequence - A.capsulata:214 P.pallidum:453

C0NS16              	100.00%		D3BE43              	100.00%
Bootstrap support for C0NS16 as seed ortholog is 100%.
Bootstrap support for D3BE43 as seed ortholog is 100%.

Group of orthologs #60. Best score 817 bits
Score difference with first non-orthologous sequence - A.capsulata:817 P.pallidum:768

C0NQM3              	100.00%		D3BG39              	100.00%
Bootstrap support for C0NQM3 as seed ortholog is 100%.
Bootstrap support for D3BG39 as seed ortholog is 100%.

Group of orthologs #61. Best score 812 bits
Score difference with first non-orthologous sequence - A.capsulata:812 P.pallidum:812

C0NQY7              	100.00%		D3BSF9              	100.00%
Bootstrap support for C0NQY7 as seed ortholog is 100%.
Bootstrap support for D3BSF9 as seed ortholog is 100%.

Group of orthologs #62. Best score 811 bits
Score difference with first non-orthologous sequence - A.capsulata:811 P.pallidum:741

C0NH95              	100.00%		D3B015              	100.00%
Bootstrap support for C0NH95 as seed ortholog is 100%.
Bootstrap support for D3B015 as seed ortholog is 100%.

Group of orthologs #63. Best score 810 bits
Score difference with first non-orthologous sequence - A.capsulata:810 P.pallidum:208

C0P128              	100.00%		D3B337              	100.00%
C0NFI9              	33.01%		D3B1J7              	23.54%
                    	       		D3AWI5              	22.73%
                    	       		D3B6Y6              	21.70%
                    	       		D3BR90              	20.91%
                    	       		D3B6Z1              	20.89%
                    	       		D3BN60              	20.81%
                    	       		D3B3H8              	19.72%
                    	       		D3BSJ8              	19.62%
                    	       		D3BN37              	19.55%
                    	       		D3BJX3              	17.93%
                    	       		D3B7P7              	17.03%
                    	       		D3B7M8              	9.52%
                    	       		D3B7M6              	9.50%
Bootstrap support for C0P128 as seed ortholog is 100%.
Bootstrap support for D3B337 as seed ortholog is 98%.

Group of orthologs #64. Best score 810 bits
Score difference with first non-orthologous sequence - A.capsulata:810 P.pallidum:810

C0P0C4              	100.00%		D3BPV1              	100.00%
Bootstrap support for C0P0C4 as seed ortholog is 100%.
Bootstrap support for D3BPV1 as seed ortholog is 100%.

Group of orthologs #65. Best score 809 bits
Score difference with first non-orthologous sequence - A.capsulata:809 P.pallidum:809

C0NSN0              	100.00%		D3B350              	100.00%
Bootstrap support for C0NSN0 as seed ortholog is 100%.
Bootstrap support for D3B350 as seed ortholog is 100%.

Group of orthologs #66. Best score 803 bits
Score difference with first non-orthologous sequence - A.capsulata:347 P.pallidum:547

C0NQX1              	100.00%		D3B883              	100.00%
Bootstrap support for C0NQX1 as seed ortholog is 100%.
Bootstrap support for D3B883 as seed ortholog is 100%.

Group of orthologs #67. Best score 792 bits
Score difference with first non-orthologous sequence - A.capsulata:792 P.pallidum:792

C0P016              	100.00%		D3B594              	100.00%
Bootstrap support for C0P016 as seed ortholog is 100%.
Bootstrap support for D3B594 as seed ortholog is 100%.

Group of orthologs #68. Best score 787 bits
Score difference with first non-orthologous sequence - A.capsulata:250 P.pallidum:242

C0NNT8              	100.00%		D3BEE3              	100.00%
Bootstrap support for C0NNT8 as seed ortholog is 100%.
Bootstrap support for D3BEE3 as seed ortholog is 100%.

Group of orthologs #69. Best score 783 bits
Score difference with first non-orthologous sequence - A.capsulata:783 P.pallidum:783

C0NCJ6              	100.00%		D3BT84              	100.00%
Bootstrap support for C0NCJ6 as seed ortholog is 100%.
Bootstrap support for D3BT84 as seed ortholog is 100%.

Group of orthologs #70. Best score 777 bits
Score difference with first non-orthologous sequence - A.capsulata:777 P.pallidum:777

C0NMK5              	100.00%		D3BQY0              	100.00%
Bootstrap support for C0NMK5 as seed ortholog is 100%.
Bootstrap support for D3BQY0 as seed ortholog is 100%.

Group of orthologs #71. Best score 775 bits
Score difference with first non-orthologous sequence - A.capsulata:775 P.pallidum:775

C0NIW4              	100.00%		D3B8U1              	100.00%
Bootstrap support for C0NIW4 as seed ortholog is 100%.
Bootstrap support for D3B8U1 as seed ortholog is 100%.

Group of orthologs #72. Best score 774 bits
Score difference with first non-orthologous sequence - A.capsulata:774 P.pallidum:401

C0NW33              	100.00%		D3BF92              	100.00%
C0NKA9              	28.58%		D3BT92              	66.02%
                    	       		D3BH58              	27.48%
Bootstrap support for C0NW33 as seed ortholog is 100%.
Bootstrap support for D3BF92 as seed ortholog is 100%.

Group of orthologs #73. Best score 772 bits
Score difference with first non-orthologous sequence - A.capsulata:772 P.pallidum:772

C0NFY5              	100.00%		D3BM68              	100.00%
Bootstrap support for C0NFY5 as seed ortholog is 100%.
Bootstrap support for D3BM68 as seed ortholog is 100%.

Group of orthologs #74. Best score 771 bits
Score difference with first non-orthologous sequence - A.capsulata:496 P.pallidum:363

C0NUK7              	100.00%		D3BMN4              	100.00%
Bootstrap support for C0NUK7 as seed ortholog is 100%.
Bootstrap support for D3BMN4 as seed ortholog is 100%.

Group of orthologs #75. Best score 770 bits
Score difference with first non-orthologous sequence - A.capsulata:770 P.pallidum:770

C0NFU2              	100.00%		D3B684              	100.00%
Bootstrap support for C0NFU2 as seed ortholog is 100%.
Bootstrap support for D3B684 as seed ortholog is 100%.

Group of orthologs #76. Best score 754 bits
Score difference with first non-orthologous sequence - A.capsulata:754 P.pallidum:754

C0NQ25              	100.00%		D3B5K4              	100.00%
Bootstrap support for C0NQ25 as seed ortholog is 100%.
Bootstrap support for D3B5K4 as seed ortholog is 100%.

Group of orthologs #77. Best score 748 bits
Score difference with first non-orthologous sequence - A.capsulata:748 P.pallidum:748

C0NJB5              	100.00%		D3AZB7              	100.00%
Bootstrap support for C0NJB5 as seed ortholog is 100%.
Bootstrap support for D3AZB7 as seed ortholog is 100%.

Group of orthologs #78. Best score 747 bits
Score difference with first non-orthologous sequence - A.capsulata:747 P.pallidum:747

C0NAM8              	100.00%		D3BEN7              	100.00%
Bootstrap support for C0NAM8 as seed ortholog is 100%.
Bootstrap support for D3BEN7 as seed ortholog is 100%.

Group of orthologs #79. Best score 739 bits
Score difference with first non-orthologous sequence - A.capsulata:640 P.pallidum:739

C0NT97              	100.00%		D3B700              	100.00%
Bootstrap support for C0NT97 as seed ortholog is 100%.
Bootstrap support for D3B700 as seed ortholog is 100%.

Group of orthologs #80. Best score 735 bits
Score difference with first non-orthologous sequence - A.capsulata:735 P.pallidum:735

C0NCI8              	100.00%		D3B3X9              	100.00%
Bootstrap support for C0NCI8 as seed ortholog is 100%.
Bootstrap support for D3B3X9 as seed ortholog is 100%.

Group of orthologs #81. Best score 733 bits
Score difference with first non-orthologous sequence - A.capsulata:733 P.pallidum:733

C0NKL8              	100.00%		D3B7Q7              	100.00%
Bootstrap support for C0NKL8 as seed ortholog is 100%.
Bootstrap support for D3B7Q7 as seed ortholog is 100%.

Group of orthologs #82. Best score 728 bits
Score difference with first non-orthologous sequence - A.capsulata:728 P.pallidum:669

C0NKD5              	100.00%		D3BC39              	100.00%
Bootstrap support for C0NKD5 as seed ortholog is 100%.
Bootstrap support for D3BC39 as seed ortholog is 100%.

Group of orthologs #83. Best score 728 bits
Score difference with first non-orthologous sequence - A.capsulata:426 P.pallidum:728

C0NTN6              	100.00%		D3BP16              	100.00%
Bootstrap support for C0NTN6 as seed ortholog is 100%.
Bootstrap support for D3BP16 as seed ortholog is 100%.

Group of orthologs #84. Best score 727 bits
Score difference with first non-orthologous sequence - A.capsulata:409 P.pallidum:490

C0NPQ6              	100.00%		D3BMR9              	100.00%
Bootstrap support for C0NPQ6 as seed ortholog is 100%.
Bootstrap support for D3BMR9 as seed ortholog is 100%.

Group of orthologs #85. Best score 726 bits
Score difference with first non-orthologous sequence - A.capsulata:726 P.pallidum:516

C0NL48              	100.00%		D3BKQ8              	100.00%
Bootstrap support for C0NL48 as seed ortholog is 100%.
Bootstrap support for D3BKQ8 as seed ortholog is 100%.

Group of orthologs #86. Best score 726 bits
Score difference with first non-orthologous sequence - A.capsulata:726 P.pallidum:726

C0NV80              	100.00%		D3BH29              	100.00%
Bootstrap support for C0NV80 as seed ortholog is 100%.
Bootstrap support for D3BH29 as seed ortholog is 100%.

Group of orthologs #87. Best score 717 bits
Score difference with first non-orthologous sequence - A.capsulata:717 P.pallidum:666

C0NI99              	100.00%		D3BIJ3              	100.00%
Bootstrap support for C0NI99 as seed ortholog is 100%.
Bootstrap support for D3BIJ3 as seed ortholog is 100%.

Group of orthologs #88. Best score 714 bits
Score difference with first non-orthologous sequence - A.capsulata:714 P.pallidum:86

C0NQZ0              	100.00%		D3AVI9              	100.00%
Bootstrap support for C0NQZ0 as seed ortholog is 100%.
Bootstrap support for D3AVI9 as seed ortholog is 77%.

Group of orthologs #89. Best score 713 bits
Score difference with first non-orthologous sequence - A.capsulata:253 P.pallidum:527

C0P013              	100.00%		D3AY31              	100.00%
Bootstrap support for C0P013 as seed ortholog is 100%.
Bootstrap support for D3AY31 as seed ortholog is 100%.

Group of orthologs #90. Best score 711 bits
Score difference with first non-orthologous sequence - A.capsulata:711 P.pallidum:711

C0NX78              	100.00%		D3BJB3              	100.00%
Bootstrap support for C0NX78 as seed ortholog is 100%.
Bootstrap support for D3BJB3 as seed ortholog is 100%.

Group of orthologs #91. Best score 709 bits
Score difference with first non-orthologous sequence - A.capsulata:586 P.pallidum:709

C0NJX2              	100.00%		D3B6W7              	100.00%
Bootstrap support for C0NJX2 as seed ortholog is 100%.
Bootstrap support for D3B6W7 as seed ortholog is 100%.

Group of orthologs #92. Best score 705 bits
Score difference with first non-orthologous sequence - A.capsulata:705 P.pallidum:705

C0NIT7              	100.00%		D3B2J1              	100.00%
Bootstrap support for C0NIT7 as seed ortholog is 100%.
Bootstrap support for D3B2J1 as seed ortholog is 100%.

Group of orthologs #93. Best score 700 bits
Score difference with first non-orthologous sequence - A.capsulata:700 P.pallidum:700

C0NYN0              	100.00%		D3BUF5              	100.00%
Bootstrap support for C0NYN0 as seed ortholog is 100%.
Bootstrap support for D3BUF5 as seed ortholog is 100%.

Group of orthologs #94. Best score 699 bits
Score difference with first non-orthologous sequence - A.capsulata:699 P.pallidum:699

C0NHY4              	100.00%		D3B5K0              	100.00%
Bootstrap support for C0NHY4 as seed ortholog is 100%.
Bootstrap support for D3B5K0 as seed ortholog is 100%.

Group of orthologs #95. Best score 699 bits
Score difference with first non-orthologous sequence - A.capsulata:699 P.pallidum:484

C0NI75              	100.00%		D3BFC6              	100.00%
Bootstrap support for C0NI75 as seed ortholog is 100%.
Bootstrap support for D3BFC6 as seed ortholog is 100%.

Group of orthologs #96. Best score 696 bits
Score difference with first non-orthologous sequence - A.capsulata:696 P.pallidum:696

C0NJY7              	100.00%		D3B3Y2              	100.00%
Bootstrap support for C0NJY7 as seed ortholog is 100%.
Bootstrap support for D3B3Y2 as seed ortholog is 100%.

Group of orthologs #97. Best score 693 bits
Score difference with first non-orthologous sequence - A.capsulata:693 P.pallidum:295

C0NMS8              	100.00%		D3B6I9              	100.00%
Bootstrap support for C0NMS8 as seed ortholog is 100%.
Bootstrap support for D3B6I9 as seed ortholog is 99%.

Group of orthologs #98. Best score 691 bits
Score difference with first non-orthologous sequence - A.capsulata:691 P.pallidum:691

C0NFR8              	100.00%		D3B3L3              	100.00%
Bootstrap support for C0NFR8 as seed ortholog is 100%.
Bootstrap support for D3B3L3 as seed ortholog is 100%.

Group of orthologs #99. Best score 690 bits
Score difference with first non-orthologous sequence - A.capsulata:690 P.pallidum:690

C0NHG0              	100.00%		D3BN72              	100.00%
Bootstrap support for C0NHG0 as seed ortholog is 100%.
Bootstrap support for D3BN72 as seed ortholog is 100%.

Group of orthologs #100. Best score 689 bits
Score difference with first non-orthologous sequence - A.capsulata:689 P.pallidum:146

P53455              	100.00%		D3B2M1              	100.00%
                    	       		D3BD07              	100.00%
                    	       		D3BM82              	84.29%
                    	       		D3BSX0              	82.86%
                    	       		D3B1V2              	17.14%
Bootstrap support for P53455 as seed ortholog is 100%.
Bootstrap support for D3B2M1 as seed ortholog is 100%.
Bootstrap support for D3BD07 as seed ortholog is 100%.

Group of orthologs #101. Best score 689 bits
Score difference with first non-orthologous sequence - A.capsulata:689 P.pallidum:689

C0NTE1              	100.00%		D3BTI9              	100.00%
Bootstrap support for C0NTE1 as seed ortholog is 100%.
Bootstrap support for D3BTI9 as seed ortholog is 100%.

Group of orthologs #102. Best score 688 bits
Score difference with first non-orthologous sequence - A.capsulata:688 P.pallidum:688

C0NJX0              	100.00%		D3BLC0              	100.00%
Bootstrap support for C0NJX0 as seed ortholog is 100%.
Bootstrap support for D3BLC0 as seed ortholog is 100%.

Group of orthologs #103. Best score 687 bits
Score difference with first non-orthologous sequence - A.capsulata:281 P.pallidum:156

C0NJB6              	100.00%		D3BMZ2              	100.00%
Bootstrap support for C0NJB6 as seed ortholog is 100%.
Bootstrap support for D3BMZ2 as seed ortholog is 99%.

Group of orthologs #104. Best score 682 bits
Score difference with first non-orthologous sequence - A.capsulata:568 P.pallidum:682

C0NSJ0              	100.00%		D3B5K2              	100.00%
Bootstrap support for C0NSJ0 as seed ortholog is 100%.
Bootstrap support for D3B5K2 as seed ortholog is 100%.

Group of orthologs #105. Best score 676 bits
Score difference with first non-orthologous sequence - A.capsulata:449 P.pallidum:468

C0NDN3              	100.00%		D3BFH7              	100.00%
Bootstrap support for C0NDN3 as seed ortholog is 100%.
Bootstrap support for D3BFH7 as seed ortholog is 100%.

Group of orthologs #106. Best score 674 bits
Score difference with first non-orthologous sequence - A.capsulata:303 P.pallidum:190

C0NGZ9              	100.00%		D3BMT5              	100.00%
Bootstrap support for C0NGZ9 as seed ortholog is 100%.
Bootstrap support for D3BMT5 as seed ortholog is 99%.

Group of orthologs #107. Best score 672 bits
Score difference with first non-orthologous sequence - A.capsulata:672 P.pallidum:672

C0NRR2              	100.00%		D3BQ18              	100.00%
Bootstrap support for C0NRR2 as seed ortholog is 100%.
Bootstrap support for D3BQ18 as seed ortholog is 100%.

Group of orthologs #108. Best score 670 bits
Score difference with first non-orthologous sequence - A.capsulata:670 P.pallidum:405

C0NJE7              	100.00%		D3BBD1              	100.00%
Bootstrap support for C0NJE7 as seed ortholog is 100%.
Bootstrap support for D3BBD1 as seed ortholog is 100%.

Group of orthologs #109. Best score 670 bits
Score difference with first non-orthologous sequence - A.capsulata:670 P.pallidum:566

C0NPY7              	100.00%		D3BEG0              	100.00%
Bootstrap support for C0NPY7 as seed ortholog is 100%.
Bootstrap support for D3BEG0 as seed ortholog is 100%.

Group of orthologs #110. Best score 669 bits
Score difference with first non-orthologous sequence - A.capsulata:340 P.pallidum:468

C0NTA9              	100.00%		D3BB39              	100.00%
Bootstrap support for C0NTA9 as seed ortholog is 100%.
Bootstrap support for D3BB39 as seed ortholog is 100%.

Group of orthologs #111. Best score 667 bits
Score difference with first non-orthologous sequence - A.capsulata:667 P.pallidum:667

C0NKB3              	100.00%		D3BQW2              	100.00%
Bootstrap support for C0NKB3 as seed ortholog is 100%.
Bootstrap support for D3BQW2 as seed ortholog is 100%.

Group of orthologs #112. Best score 665 bits
Score difference with first non-orthologous sequence - A.capsulata:665 P.pallidum:464

C0NLW6              	100.00%		D3BCV5              	100.00%
Bootstrap support for C0NLW6 as seed ortholog is 100%.
Bootstrap support for D3BCV5 as seed ortholog is 100%.

Group of orthologs #113. Best score 663 bits
Score difference with first non-orthologous sequence - A.capsulata:663 P.pallidum:663

C0NKM8              	100.00%		D3BRS6              	100.00%
Bootstrap support for C0NKM8 as seed ortholog is 100%.
Bootstrap support for D3BRS6 as seed ortholog is 100%.

Group of orthologs #114. Best score 662 bits
Score difference with first non-orthologous sequence - A.capsulata:662 P.pallidum:457

C0NW13              	100.00%		D3B0K9              	100.00%
Bootstrap support for C0NW13 as seed ortholog is 100%.
Bootstrap support for D3B0K9 as seed ortholog is 100%.

Group of orthologs #115. Best score 657 bits
Score difference with first non-orthologous sequence - A.capsulata:657 P.pallidum:657

C0NYV1              	100.00%		D3BTW9              	100.00%
Bootstrap support for C0NYV1 as seed ortholog is 100%.
Bootstrap support for D3BTW9 as seed ortholog is 100%.

Group of orthologs #116. Best score 654 bits
Score difference with first non-orthologous sequence - A.capsulata:565 P.pallidum:654

C0P0C5              	100.00%		D3B434              	100.00%
Bootstrap support for C0P0C5 as seed ortholog is 100%.
Bootstrap support for D3B434 as seed ortholog is 100%.

Group of orthologs #117. Best score 654 bits
Score difference with first non-orthologous sequence - A.capsulata:654 P.pallidum:654

C0NGA8              	100.00%		D3BTR1              	100.00%
Bootstrap support for C0NGA8 as seed ortholog is 100%.
Bootstrap support for D3BTR1 as seed ortholog is 100%.

Group of orthologs #118. Best score 654 bits
Score difference with first non-orthologous sequence - A.capsulata:654 P.pallidum:223

C0NTY9              	100.00%		D3BJH7              	100.00%
Bootstrap support for C0NTY9 as seed ortholog is 100%.
Bootstrap support for D3BJH7 as seed ortholog is 99%.

Group of orthologs #119. Best score 653 bits
Score difference with first non-orthologous sequence - A.capsulata:653 P.pallidum:653

C0P074              	100.00%		D3AWD2              	100.00%
C0P0S2              	12.18%		D3BGV6              	64.06%
Bootstrap support for C0P074 as seed ortholog is 100%.
Bootstrap support for D3AWD2 as seed ortholog is 100%.

Group of orthologs #120. Best score 653 bits
Score difference with first non-orthologous sequence - A.capsulata:653 P.pallidum:653

C0NGY5              	100.00%		D3BBR7              	100.00%
Bootstrap support for C0NGY5 as seed ortholog is 100%.
Bootstrap support for D3BBR7 as seed ortholog is 100%.

Group of orthologs #121. Best score 651 bits
Score difference with first non-orthologous sequence - A.capsulata:461 P.pallidum:472

C0NN82              	100.00%		D3B6E1              	100.00%
Bootstrap support for C0NN82 as seed ortholog is 100%.
Bootstrap support for D3B6E1 as seed ortholog is 100%.

Group of orthologs #122. Best score 649 bits
Score difference with first non-orthologous sequence - A.capsulata:314 P.pallidum:400

C0NXA1              	100.00%		D3B1M4              	100.00%
Bootstrap support for C0NXA1 as seed ortholog is 100%.
Bootstrap support for D3B1M4 as seed ortholog is 100%.

Group of orthologs #123. Best score 649 bits
Score difference with first non-orthologous sequence - A.capsulata:649 P.pallidum:649

C0NUM6              	100.00%		D3BBF7              	100.00%
Bootstrap support for C0NUM6 as seed ortholog is 100%.
Bootstrap support for D3BBF7 as seed ortholog is 100%.

Group of orthologs #124. Best score 646 bits
Score difference with first non-orthologous sequence - A.capsulata:337 P.pallidum:646

C0NSR0              	100.00%		D3B0M9              	100.00%
Bootstrap support for C0NSR0 as seed ortholog is 100%.
Bootstrap support for D3B0M9 as seed ortholog is 100%.

Group of orthologs #125. Best score 646 bits
Score difference with first non-orthologous sequence - A.capsulata:646 P.pallidum:536

C0NUD2              	100.00%		D3B1H9              	100.00%
Bootstrap support for C0NUD2 as seed ortholog is 100%.
Bootstrap support for D3B1H9 as seed ortholog is 100%.

Group of orthologs #126. Best score 644 bits
Score difference with first non-orthologous sequence - A.capsulata:644 P.pallidum:644

C0NSR5              	100.00%		D3BFQ1              	100.00%
Bootstrap support for C0NSR5 as seed ortholog is 100%.
Bootstrap support for D3BFQ1 as seed ortholog is 100%.

Group of orthologs #127. Best score 642 bits
Score difference with first non-orthologous sequence - A.capsulata:642 P.pallidum:226

C0NAD8              	100.00%		D3B255              	100.00%
Bootstrap support for C0NAD8 as seed ortholog is 100%.
Bootstrap support for D3B255 as seed ortholog is 100%.

Group of orthologs #128. Best score 641 bits
Score difference with first non-orthologous sequence - A.capsulata:519 P.pallidum:400

C0P0H4              	100.00%		D3AW74              	100.00%
Bootstrap support for C0P0H4 as seed ortholog is 100%.
Bootstrap support for D3AW74 as seed ortholog is 100%.

Group of orthologs #129. Best score 641 bits
Score difference with first non-orthologous sequence - A.capsulata:641 P.pallidum:490

C0NGQ9              	100.00%		D3BK16              	100.00%
Bootstrap support for C0NGQ9 as seed ortholog is 100%.
Bootstrap support for D3BK16 as seed ortholog is 100%.

Group of orthologs #130. Best score 637 bits
Score difference with first non-orthologous sequence - A.capsulata:637 P.pallidum:637

C0NTI7              	100.00%		D3BSJ1              	100.00%
Bootstrap support for C0NTI7 as seed ortholog is 100%.
Bootstrap support for D3BSJ1 as seed ortholog is 100%.

Group of orthologs #131. Best score 636 bits
Score difference with first non-orthologous sequence - A.capsulata:317 P.pallidum:636

C0NCM7              	100.00%		D3BRF2              	100.00%
Bootstrap support for C0NCM7 as seed ortholog is 100%.
Bootstrap support for D3BRF2 as seed ortholog is 100%.

Group of orthologs #132. Best score 630 bits
Score difference with first non-orthologous sequence - A.capsulata:630 P.pallidum:630

C0NUR0              	100.00%		D3BIZ6              	100.00%
Bootstrap support for C0NUR0 as seed ortholog is 100%.
Bootstrap support for D3BIZ6 as seed ortholog is 100%.

Group of orthologs #133. Best score 628 bits
Score difference with first non-orthologous sequence - A.capsulata:628 P.pallidum:628

C0NE03              	100.00%		D3B1K5              	100.00%
Bootstrap support for C0NE03 as seed ortholog is 100%.
Bootstrap support for D3B1K5 as seed ortholog is 100%.

Group of orthologs #134. Best score 628 bits
Score difference with first non-orthologous sequence - A.capsulata:628 P.pallidum:443

C0NVX4              	100.00%		D3B8D9              	100.00%
Bootstrap support for C0NVX4 as seed ortholog is 100%.
Bootstrap support for D3B8D9 as seed ortholog is 100%.

Group of orthologs #135. Best score 627 bits
Score difference with first non-orthologous sequence - A.capsulata:627 P.pallidum:424

C0NGE6              	100.00%		D3BPJ6              	100.00%
Bootstrap support for C0NGE6 as seed ortholog is 100%.
Bootstrap support for D3BPJ6 as seed ortholog is 100%.

Group of orthologs #136. Best score 623 bits
Score difference with first non-orthologous sequence - A.capsulata:623 P.pallidum:163

C0NRC1              	100.00%		D3B2W9              	100.00%
Bootstrap support for C0NRC1 as seed ortholog is 100%.
Bootstrap support for D3B2W9 as seed ortholog is 99%.

Group of orthologs #137. Best score 622 bits
Score difference with first non-orthologous sequence - A.capsulata:494 P.pallidum:345

C0NFC9              	100.00%		D3B1G6              	100.00%
Bootstrap support for C0NFC9 as seed ortholog is 100%.
Bootstrap support for D3B1G6 as seed ortholog is 100%.

Group of orthologs #138. Best score 622 bits
Score difference with first non-orthologous sequence - A.capsulata:622 P.pallidum:622

C0NAW3              	100.00%		D3BJL2              	100.00%
Bootstrap support for C0NAW3 as seed ortholog is 100%.
Bootstrap support for D3BJL2 as seed ortholog is 100%.

Group of orthologs #139. Best score 622 bits
Score difference with first non-orthologous sequence - A.capsulata:622 P.pallidum:394

C0NQG6              	100.00%		D3B5E4              	100.00%
Bootstrap support for C0NQG6 as seed ortholog is 100%.
Bootstrap support for D3B5E4 as seed ortholog is 100%.

Group of orthologs #140. Best score 621 bits
Score difference with first non-orthologous sequence - A.capsulata:621 P.pallidum:621

C0NJC3              	100.00%		D3BNY4              	100.00%
Bootstrap support for C0NJC3 as seed ortholog is 100%.
Bootstrap support for D3BNY4 as seed ortholog is 100%.

Group of orthologs #141. Best score 617 bits
Score difference with first non-orthologous sequence - A.capsulata:617 P.pallidum:617

C0NE67              	100.00%		D3AWX0              	100.00%
Bootstrap support for C0NE67 as seed ortholog is 100%.
Bootstrap support for D3AWX0 as seed ortholog is 100%.

Group of orthologs #142. Best score 616 bits
Score difference with first non-orthologous sequence - A.capsulata:616 P.pallidum:616

C0NJZ2              	100.00%		D3BI12              	100.00%
Bootstrap support for C0NJZ2 as seed ortholog is 100%.
Bootstrap support for D3BI12 as seed ortholog is 100%.

Group of orthologs #143. Best score 616 bits
Score difference with first non-orthologous sequence - A.capsulata:616 P.pallidum:616

C0NLK4              	100.00%		D3BPD1              	100.00%
Bootstrap support for C0NLK4 as seed ortholog is 100%.
Bootstrap support for D3BPD1 as seed ortholog is 100%.

Group of orthologs #144. Best score 615 bits
Score difference with first non-orthologous sequence - A.capsulata:615 P.pallidum:86

C0NJR3              	100.00%		D3B105              	100.00%
Bootstrap support for C0NJR3 as seed ortholog is 100%.
Bootstrap support for D3B105 as seed ortholog is 88%.

Group of orthologs #145. Best score 615 bits
Score difference with first non-orthologous sequence - A.capsulata:615 P.pallidum:615

C0NE28              	100.00%		D3B7L4              	100.00%
Bootstrap support for C0NE28 as seed ortholog is 100%.
Bootstrap support for D3B7L4 as seed ortholog is 100%.

Group of orthologs #146. Best score 612 bits
Score difference with first non-orthologous sequence - A.capsulata:612 P.pallidum:612

C0NE71              	100.00%		D3AYV1              	100.00%
Bootstrap support for C0NE71 as seed ortholog is 100%.
Bootstrap support for D3AYV1 as seed ortholog is 100%.

Group of orthologs #147. Best score 612 bits
Score difference with first non-orthologous sequence - A.capsulata:612 P.pallidum:536

C0P0B3              	100.00%		D3B3I9              	100.00%
Bootstrap support for C0P0B3 as seed ortholog is 100%.
Bootstrap support for D3B3I9 as seed ortholog is 100%.

Group of orthologs #148. Best score 611 bits
Score difference with first non-orthologous sequence - A.capsulata:611 P.pallidum:374

C0NUR1              	100.00%		D3B3N8              	100.00%
Bootstrap support for C0NUR1 as seed ortholog is 100%.
Bootstrap support for D3B3N8 as seed ortholog is 100%.

Group of orthologs #149. Best score 609 bits
Score difference with first non-orthologous sequence - A.capsulata:485 P.pallidum:609

C0NRU9              	100.00%		D3AWY9              	100.00%
Bootstrap support for C0NRU9 as seed ortholog is 100%.
Bootstrap support for D3AWY9 as seed ortholog is 100%.

Group of orthologs #150. Best score 607 bits
Score difference with first non-orthologous sequence - A.capsulata:607 P.pallidum:607

C0NL89              	100.00%		D3BDZ2              	100.00%
Bootstrap support for C0NL89 as seed ortholog is 100%.
Bootstrap support for D3BDZ2 as seed ortholog is 100%.

Group of orthologs #151. Best score 606 bits
Score difference with first non-orthologous sequence - A.capsulata:606 P.pallidum:606

C0NRH1              	100.00%		D3BB77              	100.00%
Bootstrap support for C0NRH1 as seed ortholog is 100%.
Bootstrap support for D3BB77 as seed ortholog is 100%.

Group of orthologs #152. Best score 606 bits
Score difference with first non-orthologous sequence - A.capsulata:606 P.pallidum:490

C0NZR4              	100.00%		D3BE62              	100.00%
Bootstrap support for C0NZR4 as seed ortholog is 100%.
Bootstrap support for D3BE62 as seed ortholog is 100%.

Group of orthologs #153. Best score 605 bits
Score difference with first non-orthologous sequence - A.capsulata:605 P.pallidum:412

C0NHQ2              	100.00%		D3BHG0              	100.00%
Bootstrap support for C0NHQ2 as seed ortholog is 100%.
Bootstrap support for D3BHG0 as seed ortholog is 100%.

Group of orthologs #154. Best score 605 bits
Score difference with first non-orthologous sequence - A.capsulata:605 P.pallidum:605

C0NWV4              	100.00%		D3B4I1              	100.00%
Bootstrap support for C0NWV4 as seed ortholog is 100%.
Bootstrap support for D3B4I1 as seed ortholog is 100%.

Group of orthologs #155. Best score 604 bits
Score difference with first non-orthologous sequence - A.capsulata:604 P.pallidum:604

C0NGZ7              	100.00%		D3BDW2              	100.00%
Bootstrap support for C0NGZ7 as seed ortholog is 100%.
Bootstrap support for D3BDW2 as seed ortholog is 100%.

Group of orthologs #156. Best score 599 bits
Score difference with first non-orthologous sequence - A.capsulata:599 P.pallidum:599

C0NC44              	100.00%		D3B474              	100.00%
Bootstrap support for C0NC44 as seed ortholog is 100%.
Bootstrap support for D3B474 as seed ortholog is 100%.

Group of orthologs #157. Best score 599 bits
Score difference with first non-orthologous sequence - A.capsulata:599 P.pallidum:599

C0P057              	100.00%		D3BB83              	100.00%
Bootstrap support for C0P057 as seed ortholog is 100%.
Bootstrap support for D3BB83 as seed ortholog is 100%.

Group of orthologs #158. Best score 596 bits
Score difference with first non-orthologous sequence - A.capsulata:596 P.pallidum:596

C0NGM1              	100.00%		D3AYZ6              	100.00%
Bootstrap support for C0NGM1 as seed ortholog is 100%.
Bootstrap support for D3AYZ6 as seed ortholog is 100%.

Group of orthologs #159. Best score 596 bits
Score difference with first non-orthologous sequence - A.capsulata:253 P.pallidum:179

C0NN06              	100.00%		D3BB49              	100.00%
Bootstrap support for C0NN06 as seed ortholog is 99%.
Bootstrap support for D3BB49 as seed ortholog is 99%.

Group of orthologs #160. Best score 594 bits
Score difference with first non-orthologous sequence - A.capsulata:594 P.pallidum:510

C0NE87              	100.00%		D3BVG6              	100.00%
                    	       		D3AY71              	12.04%
Bootstrap support for C0NE87 as seed ortholog is 100%.
Bootstrap support for D3BVG6 as seed ortholog is 100%.

Group of orthologs #161. Best score 594 bits
Score difference with first non-orthologous sequence - A.capsulata:594 P.pallidum:594

C0NC04              	100.00%		D3B6H8              	100.00%
Bootstrap support for C0NC04 as seed ortholog is 100%.
Bootstrap support for D3B6H8 as seed ortholog is 100%.

Group of orthologs #162. Best score 592 bits
Score difference with first non-orthologous sequence - A.capsulata:592 P.pallidum:468

C0NQQ8              	100.00%		D3BAM8              	100.00%
C0P0P7              	20.03%		
Bootstrap support for C0NQQ8 as seed ortholog is 100%.
Bootstrap support for D3BAM8 as seed ortholog is 100%.

Group of orthologs #163. Best score 591 bits
Score difference with first non-orthologous sequence - A.capsulata:243 P.pallidum:309

C0NP36              	100.00%		D3BV25              	100.00%
Bootstrap support for C0NP36 as seed ortholog is 99%.
Bootstrap support for D3BV25 as seed ortholog is 100%.

Group of orthologs #164. Best score 588 bits
Score difference with first non-orthologous sequence - A.capsulata:588 P.pallidum:588

C0NLF6              	100.00%		D3BMY2              	100.00%
Bootstrap support for C0NLF6 as seed ortholog is 100%.
Bootstrap support for D3BMY2 as seed ortholog is 100%.

Group of orthologs #165. Best score 586 bits
Score difference with first non-orthologous sequence - A.capsulata:586 P.pallidum:586

C0NYN4              	100.00%		D3B0U2              	100.00%
Bootstrap support for C0NYN4 as seed ortholog is 100%.
Bootstrap support for D3B0U2 as seed ortholog is 100%.

Group of orthologs #166. Best score 585 bits
Score difference with first non-orthologous sequence - A.capsulata:363 P.pallidum:445

C0NN27              	100.00%		D3BUA7              	100.00%
Bootstrap support for C0NN27 as seed ortholog is 100%.
Bootstrap support for D3BUA7 as seed ortholog is 100%.

Group of orthologs #167. Best score 583 bits
Score difference with first non-orthologous sequence - A.capsulata:583 P.pallidum:583

C0NDY9              	100.00%		D3B5W3              	100.00%
Bootstrap support for C0NDY9 as seed ortholog is 100%.
Bootstrap support for D3B5W3 as seed ortholog is 100%.

Group of orthologs #168. Best score 581 bits
Score difference with first non-orthologous sequence - A.capsulata:443 P.pallidum:581

C0NTW1              	100.00%		D3BC24              	100.00%
Bootstrap support for C0NTW1 as seed ortholog is 100%.
Bootstrap support for D3BC24 as seed ortholog is 100%.

Group of orthologs #169. Best score 580 bits
Score difference with first non-orthologous sequence - A.capsulata:165 P.pallidum:179

C0P0H6              	100.00%		D3BHW3              	100.00%
Bootstrap support for C0P0H6 as seed ortholog is 99%.
Bootstrap support for D3BHW3 as seed ortholog is 99%.

Group of orthologs #170. Best score 577 bits
Score difference with first non-orthologous sequence - A.capsulata:518 P.pallidum:577

C0ND64              	100.00%		D3AYX0              	100.00%
Bootstrap support for C0ND64 as seed ortholog is 100%.
Bootstrap support for D3AYX0 as seed ortholog is 100%.

Group of orthologs #171. Best score 577 bits
Score difference with first non-orthologous sequence - A.capsulata:577 P.pallidum:577

C0NZU1              	100.00%		D3BAK5              	100.00%
Bootstrap support for C0NZU1 as seed ortholog is 100%.
Bootstrap support for D3BAK5 as seed ortholog is 100%.

Group of orthologs #172. Best score 577 bits
Score difference with first non-orthologous sequence - A.capsulata:577 P.pallidum:577

C0NXA6              	100.00%		D3BMP9              	100.00%
Bootstrap support for C0NXA6 as seed ortholog is 100%.
Bootstrap support for D3BMP9 as seed ortholog is 100%.

Group of orthologs #173. Best score 576 bits
Score difference with first non-orthologous sequence - A.capsulata:576 P.pallidum:576

C0P100              	100.00%		D3B1R9              	100.00%
Bootstrap support for C0P100 as seed ortholog is 100%.
Bootstrap support for D3B1R9 as seed ortholog is 100%.

Group of orthologs #174. Best score 575 bits
Score difference with first non-orthologous sequence - A.capsulata:575 P.pallidum:575

C0NJV7              	100.00%		D3BUD3              	100.00%
                    	       		D3BUC4              	45.52%
Bootstrap support for C0NJV7 as seed ortholog is 100%.
Bootstrap support for D3BUD3 as seed ortholog is 100%.

Group of orthologs #175. Best score 575 bits
Score difference with first non-orthologous sequence - A.capsulata:575 P.pallidum:144

C0NIN5              	100.00%		D3AWM0              	100.00%
Bootstrap support for C0NIN5 as seed ortholog is 100%.
Bootstrap support for D3AWM0 as seed ortholog is 99%.

Group of orthologs #176. Best score 575 bits
Score difference with first non-orthologous sequence - A.capsulata:163 P.pallidum:575

C0NNE8              	100.00%		D3BTZ2              	100.00%
Bootstrap support for C0NNE8 as seed ortholog is 99%.
Bootstrap support for D3BTZ2 as seed ortholog is 100%.

Group of orthologs #177. Best score 574 bits
Score difference with first non-orthologous sequence - A.capsulata:574 P.pallidum:574

C0NYK0              	100.00%		D3B714              	100.00%
Bootstrap support for C0NYK0 as seed ortholog is 100%.
Bootstrap support for D3B714 as seed ortholog is 100%.

Group of orthologs #178. Best score 571 bits
Score difference with first non-orthologous sequence - A.capsulata:571 P.pallidum:571

C0NTH1              	100.00%		D3BQX1              	100.00%
Bootstrap support for C0NTH1 as seed ortholog is 100%.
Bootstrap support for D3BQX1 as seed ortholog is 100%.

Group of orthologs #179. Best score 570 bits
Score difference with first non-orthologous sequence - A.capsulata:457 P.pallidum:487

C0NKB2              	100.00%		D3BP41              	100.00%
C0NSV6              	26.58%		
Bootstrap support for C0NKB2 as seed ortholog is 100%.
Bootstrap support for D3BP41 as seed ortholog is 100%.

Group of orthologs #180. Best score 567 bits
Score difference with first non-orthologous sequence - A.capsulata:567 P.pallidum:567

C0NGU3              	100.00%		D3B3Q9              	100.00%
Bootstrap support for C0NGU3 as seed ortholog is 100%.
Bootstrap support for D3B3Q9 as seed ortholog is 100%.

Group of orthologs #181. Best score 567 bits
Score difference with first non-orthologous sequence - A.capsulata:567 P.pallidum:567

C0NIQ0              	100.00%		D3B3X6              	100.00%
Bootstrap support for C0NIQ0 as seed ortholog is 100%.
Bootstrap support for D3B3X6 as seed ortholog is 100%.

Group of orthologs #182. Best score 567 bits
Score difference with first non-orthologous sequence - A.capsulata:567 P.pallidum:66

C0NE85              	100.00%		D3BG45              	100.00%
Bootstrap support for C0NE85 as seed ortholog is 100%.
Bootstrap support for D3BG45 as seed ortholog is 83%.

Group of orthologs #183. Best score 566 bits
Score difference with first non-orthologous sequence - A.capsulata:566 P.pallidum:566

C0NMY3              	100.00%		D3B8W8              	100.00%
                    	       		D3AYG7              	38.64%
                    	       		D3BFQ9              	8.47%
Bootstrap support for C0NMY3 as seed ortholog is 100%.
Bootstrap support for D3B8W8 as seed ortholog is 100%.

Group of orthologs #184. Best score 566 bits
Score difference with first non-orthologous sequence - A.capsulata:42 P.pallidum:566

C0NPQ1              	100.00%		D3BIK5              	100.00%
                    	       		D3BIK6              	26.31%
                    	       		D3B222              	17.70%
Bootstrap support for C0NPQ1 as seed ortholog is 69%.
Alternative seed ortholog is C0NEI5 (42 bits away from this cluster)
Bootstrap support for D3BIK5 as seed ortholog is 100%.

Group of orthologs #185. Best score 566 bits
Score difference with first non-orthologous sequence - A.capsulata:566 P.pallidum:368

C0NTU7              	100.00%		D3B3K7              	100.00%
Bootstrap support for C0NTU7 as seed ortholog is 100%.
Bootstrap support for D3B3K7 as seed ortholog is 100%.

Group of orthologs #186. Best score 566 bits
Score difference with first non-orthologous sequence - A.capsulata:113 P.pallidum:289

C0NWJ1              	100.00%		D3B4W2              	100.00%
Bootstrap support for C0NWJ1 as seed ortholog is 93%.
Bootstrap support for D3B4W2 as seed ortholog is 99%.

Group of orthologs #187. Best score 565 bits
Score difference with first non-orthologous sequence - A.capsulata:565 P.pallidum:565

C0NV44              	100.00%		D3BPU8              	100.00%
Bootstrap support for C0NV44 as seed ortholog is 100%.
Bootstrap support for D3BPU8 as seed ortholog is 100%.

Group of orthologs #188. Best score 562 bits
Score difference with first non-orthologous sequence - A.capsulata:562 P.pallidum:562

C0NDN0              	100.00%		D3B6W8              	100.00%
Bootstrap support for C0NDN0 as seed ortholog is 100%.
Bootstrap support for D3B6W8 as seed ortholog is 100%.

Group of orthologs #189. Best score 562 bits
Score difference with first non-orthologous sequence - A.capsulata:562 P.pallidum:562

C0NN00              	100.00%		D3AZD2              	100.00%
Bootstrap support for C0NN00 as seed ortholog is 100%.
Bootstrap support for D3AZD2 as seed ortholog is 100%.

Group of orthologs #190. Best score 562 bits
Score difference with first non-orthologous sequence - A.capsulata:562 P.pallidum:562

C0NC53              	100.00%		D3BQM7              	100.00%
Bootstrap support for C0NC53 as seed ortholog is 100%.
Bootstrap support for D3BQM7 as seed ortholog is 100%.

Group of orthologs #191. Best score 561 bits
Score difference with first non-orthologous sequence - A.capsulata:561 P.pallidum:561

C0NYT2              	100.00%		D3BGX5              	100.00%
Bootstrap support for C0NYT2 as seed ortholog is 100%.
Bootstrap support for D3BGX5 as seed ortholog is 100%.

Group of orthologs #192. Best score 559 bits
Score difference with first non-orthologous sequence - A.capsulata:559 P.pallidum:559

C0NUW5              	100.00%		D3BII3              	100.00%
Bootstrap support for C0NUW5 as seed ortholog is 100%.
Bootstrap support for D3BII3 as seed ortholog is 100%.

Group of orthologs #193. Best score 557 bits
Score difference with first non-orthologous sequence - A.capsulata:198 P.pallidum:557

C0NLY7              	100.00%		D3BUQ9              	100.00%
Bootstrap support for C0NLY7 as seed ortholog is 99%.
Bootstrap support for D3BUQ9 as seed ortholog is 100%.

Group of orthologs #194. Best score 556 bits
Score difference with first non-orthologous sequence - A.capsulata:204 P.pallidum:236

C0NHG9              	100.00%		D3BAY0              	100.00%
Bootstrap support for C0NHG9 as seed ortholog is 99%.
Bootstrap support for D3BAY0 as seed ortholog is 96%.

Group of orthologs #195. Best score 556 bits
Score difference with first non-orthologous sequence - A.capsulata:556 P.pallidum:447

C0NL64              	100.00%		D3BP61              	100.00%
Bootstrap support for C0NL64 as seed ortholog is 100%.
Bootstrap support for D3BP61 as seed ortholog is 100%.

Group of orthologs #196. Best score 556 bits
Score difference with first non-orthologous sequence - A.capsulata:556 P.pallidum:475

P40911              	100.00%		D3BP51              	100.00%
Bootstrap support for P40911 as seed ortholog is 100%.
Bootstrap support for D3BP51 as seed ortholog is 100%.

Group of orthologs #197. Best score 555 bits
Score difference with first non-orthologous sequence - A.capsulata:555 P.pallidum:555

C0NT40              	100.00%		D3BRB4              	100.00%
Bootstrap support for C0NT40 as seed ortholog is 100%.
Bootstrap support for D3BRB4 as seed ortholog is 100%.

Group of orthologs #198. Best score 555 bits
Score difference with first non-orthologous sequence - A.capsulata:555 P.pallidum:295

C0P0L3              	100.00%		D3BPC8              	100.00%
Bootstrap support for C0P0L3 as seed ortholog is 100%.
Bootstrap support for D3BPC8 as seed ortholog is 100%.

Group of orthologs #199. Best score 551 bits
Score difference with first non-orthologous sequence - A.capsulata:551 P.pallidum:551

C0NMF2              	100.00%		D3BGE1              	100.00%
Bootstrap support for C0NMF2 as seed ortholog is 100%.
Bootstrap support for D3BGE1 as seed ortholog is 100%.

Group of orthologs #200. Best score 548 bits
Score difference with first non-orthologous sequence - A.capsulata:548 P.pallidum:548

C0NJJ9              	100.00%		D3B718              	100.00%
Bootstrap support for C0NJJ9 as seed ortholog is 100%.
Bootstrap support for D3B718 as seed ortholog is 100%.

Group of orthologs #201. Best score 548 bits
Score difference with first non-orthologous sequence - A.capsulata:548 P.pallidum:548

C0NAI8              	100.00%		D3BQU1              	100.00%
Bootstrap support for C0NAI8 as seed ortholog is 100%.
Bootstrap support for D3BQU1 as seed ortholog is 100%.

Group of orthologs #202. Best score 545 bits
Score difference with first non-orthologous sequence - A.capsulata:545 P.pallidum:545

C0NPX2              	100.00%		D3AY16              	100.00%
Bootstrap support for C0NPX2 as seed ortholog is 100%.
Bootstrap support for D3AY16 as seed ortholog is 100%.

Group of orthologs #203. Best score 545 bits
Score difference with first non-orthologous sequence - A.capsulata:545 P.pallidum:545

C0NV15              	100.00%		D3B5U3              	100.00%
Bootstrap support for C0NV15 as seed ortholog is 100%.
Bootstrap support for D3B5U3 as seed ortholog is 100%.

Group of orthologs #204. Best score 545 bits
Score difference with first non-orthologous sequence - A.capsulata:365 P.pallidum:424

C0NPM1              	100.00%		D3BK57              	100.00%
Bootstrap support for C0NPM1 as seed ortholog is 100%.
Bootstrap support for D3BK57 as seed ortholog is 100%.

Group of orthologs #205. Best score 544 bits
Score difference with first non-orthologous sequence - A.capsulata:544 P.pallidum:544

C0NH09              	100.00%		D3BTG6              	100.00%
Bootstrap support for C0NH09 as seed ortholog is 100%.
Bootstrap support for D3BTG6 as seed ortholog is 100%.

Group of orthologs #206. Best score 542 bits
Score difference with first non-orthologous sequence - A.capsulata:337 P.pallidum:152

C0NWY8              	100.00%		D3B313              	100.00%
Bootstrap support for C0NWY8 as seed ortholog is 98%.
Bootstrap support for D3B313 as seed ortholog is 100%.

Group of orthologs #207. Best score 538 bits
Score difference with first non-orthologous sequence - A.capsulata:538 P.pallidum:538

C0NAW4              	100.00%		D3BEC9              	100.00%
                    	       		D3B1Q4              	8.02%
Bootstrap support for C0NAW4 as seed ortholog is 100%.
Bootstrap support for D3BEC9 as seed ortholog is 100%.

Group of orthologs #208. Best score 538 bits
Score difference with first non-orthologous sequence - A.capsulata:162 P.pallidum:145

C0NRT5              	100.00%		D3BKP8              	100.00%
Bootstrap support for C0NRT5 as seed ortholog is 100%.
Bootstrap support for D3BKP8 as seed ortholog is 100%.

Group of orthologs #209. Best score 537 bits
Score difference with first non-orthologous sequence - A.capsulata:537 P.pallidum:537

C0NJ74              	100.00%		D3B427              	100.00%
Bootstrap support for C0NJ74 as seed ortholog is 100%.
Bootstrap support for D3B427 as seed ortholog is 100%.

Group of orthologs #210. Best score 537 bits
Score difference with first non-orthologous sequence - A.capsulata:537 P.pallidum:384

C0NU66              	100.00%		D3AZW1              	100.00%
Bootstrap support for C0NU66 as seed ortholog is 100%.
Bootstrap support for D3AZW1 as seed ortholog is 100%.

Group of orthologs #211. Best score 537 bits
Score difference with first non-orthologous sequence - A.capsulata:286 P.pallidum:97

C0NI62              	100.00%		D3BRU6              	100.00%
Bootstrap support for C0NI62 as seed ortholog is 100%.
Bootstrap support for D3BRU6 as seed ortholog is 98%.

Group of orthologs #212. Best score 536 bits
Score difference with first non-orthologous sequence - A.capsulata:232 P.pallidum:141

C0NXA8              	100.00%		D3BB29              	100.00%
Bootstrap support for C0NXA8 as seed ortholog is 100%.
Bootstrap support for D3BB29 as seed ortholog is 99%.

Group of orthologs #213. Best score 535 bits
Score difference with first non-orthologous sequence - A.capsulata:535 P.pallidum:535

C0NZ50              	100.00%		D3BFA6              	100.00%
Bootstrap support for C0NZ50 as seed ortholog is 100%.
Bootstrap support for D3BFA6 as seed ortholog is 100%.

Group of orthologs #214. Best score 533 bits
Score difference with first non-orthologous sequence - A.capsulata:533 P.pallidum:533

C0P1C1              	100.00%		D3AWW1              	100.00%
Bootstrap support for C0P1C1 as seed ortholog is 100%.
Bootstrap support for D3AWW1 as seed ortholog is 100%.

Group of orthologs #215. Best score 532 bits
Score difference with first non-orthologous sequence - A.capsulata:323 P.pallidum:532

C0NTY6              	100.00%		D3AXU9              	100.00%
Bootstrap support for C0NTY6 as seed ortholog is 100%.
Bootstrap support for D3AXU9 as seed ortholog is 100%.

Group of orthologs #216. Best score 531 bits
Score difference with first non-orthologous sequence - A.capsulata:323 P.pallidum:264

C0NCA6              	100.00%		D3BBY9              	100.00%
Bootstrap support for C0NCA6 as seed ortholog is 100%.
Bootstrap support for D3BBY9 as seed ortholog is 100%.

Group of orthologs #217. Best score 530 bits
Score difference with first non-orthologous sequence - A.capsulata:530 P.pallidum:315

C0NNU4              	100.00%		D3BDI4              	100.00%
Bootstrap support for C0NNU4 as seed ortholog is 100%.
Bootstrap support for D3BDI4 as seed ortholog is 100%.

Group of orthologs #218. Best score 528 bits
Score difference with first non-orthologous sequence - A.capsulata:528 P.pallidum:276

C0P096              	100.00%		D3AZS5              	100.00%
Bootstrap support for C0P096 as seed ortholog is 100%.
Bootstrap support for D3AZS5 as seed ortholog is 100%.

Group of orthologs #219. Best score 528 bits
Score difference with first non-orthologous sequence - A.capsulata:528 P.pallidum:528

C0NBC7              	100.00%		D3BQJ8              	100.00%
Bootstrap support for C0NBC7 as seed ortholog is 100%.
Bootstrap support for D3BQJ8 as seed ortholog is 100%.

Group of orthologs #220. Best score 526 bits
Score difference with first non-orthologous sequence - A.capsulata:462 P.pallidum:138

C0NWI6              	100.00%		D3AZ87              	100.00%
Bootstrap support for C0NWI6 as seed ortholog is 100%.
Bootstrap support for D3AZ87 as seed ortholog is 99%.

Group of orthologs #221. Best score 524 bits
Score difference with first non-orthologous sequence - A.capsulata:524 P.pallidum:447

C0NBX7              	100.00%		D3BE83              	100.00%
Bootstrap support for C0NBX7 as seed ortholog is 100%.
Bootstrap support for D3BE83 as seed ortholog is 100%.

Group of orthologs #222. Best score 524 bits
Score difference with first non-orthologous sequence - A.capsulata:524 P.pallidum:311

C0NQT6              	100.00%		D3BKM7              	100.00%
Bootstrap support for C0NQT6 as seed ortholog is 100%.
Bootstrap support for D3BKM7 as seed ortholog is 100%.

Group of orthologs #223. Best score 524 bits
Score difference with first non-orthologous sequence - A.capsulata:524 P.pallidum:524

C0NLW7              	100.00%		D3BRI9              	100.00%
Bootstrap support for C0NLW7 as seed ortholog is 100%.
Bootstrap support for D3BRI9 as seed ortholog is 100%.

Group of orthologs #224. Best score 522 bits
Score difference with first non-orthologous sequence - A.capsulata:522 P.pallidum:522

C0NAB1              	100.00%		D3BHQ7              	100.00%
Bootstrap support for C0NAB1 as seed ortholog is 100%.
Bootstrap support for D3BHQ7 as seed ortholog is 100%.

Group of orthologs #225. Best score 522 bits
Score difference with first non-orthologous sequence - A.capsulata:183 P.pallidum:522

C0NVF6              	100.00%		D3B731              	100.00%
Bootstrap support for C0NVF6 as seed ortholog is 99%.
Bootstrap support for D3B731 as seed ortholog is 100%.

Group of orthologs #226. Best score 522 bits
Score difference with first non-orthologous sequence - A.capsulata:522 P.pallidum:522

C0NU30              	100.00%		D3BAM6              	100.00%
Bootstrap support for C0NU30 as seed ortholog is 100%.
Bootstrap support for D3BAM6 as seed ortholog is 100%.

Group of orthologs #227. Best score 520 bits
Score difference with first non-orthologous sequence - A.capsulata:520 P.pallidum:219

C0NRF2              	100.00%		D3B2M6              	100.00%
Bootstrap support for C0NRF2 as seed ortholog is 100%.
Bootstrap support for D3B2M6 as seed ortholog is 100%.

Group of orthologs #228. Best score 519 bits
Score difference with first non-orthologous sequence - A.capsulata:519 P.pallidum:77

C0NDH4              	100.00%		D3B5W1              	100.00%
Bootstrap support for C0NDH4 as seed ortholog is 100%.
Bootstrap support for D3B5W1 as seed ortholog is 70%.
Alternative seed ortholog is D3BIH4 (77 bits away from this cluster)

Group of orthologs #229. Best score 518 bits
Score difference with first non-orthologous sequence - A.capsulata:518 P.pallidum:518

C0NHR7              	100.00%		D3BGC4              	100.00%
Bootstrap support for C0NHR7 as seed ortholog is 100%.
Bootstrap support for D3BGC4 as seed ortholog is 100%.

Group of orthologs #230. Best score 517 bits
Score difference with first non-orthologous sequence - A.capsulata:517 P.pallidum:517

C0NAS1              	100.00%		D3BB07              	100.00%
Bootstrap support for C0NAS1 as seed ortholog is 100%.
Bootstrap support for D3BB07 as seed ortholog is 100%.

Group of orthologs #231. Best score 517 bits
Score difference with first non-orthologous sequence - A.capsulata:517 P.pallidum:517

C0NJB1              	100.00%		D3BGD9              	100.00%
Bootstrap support for C0NJB1 as seed ortholog is 100%.
Bootstrap support for D3BGD9 as seed ortholog is 100%.

Group of orthologs #232. Best score 515 bits
Score difference with first non-orthologous sequence - A.capsulata:515 P.pallidum:515

C0NDC6              	100.00%		D3BK20              	100.00%
Bootstrap support for C0NDC6 as seed ortholog is 100%.
Bootstrap support for D3BK20 as seed ortholog is 100%.

Group of orthologs #233. Best score 513 bits
Score difference with first non-orthologous sequence - A.capsulata:513 P.pallidum:513

C0NIH0              	100.00%		D3BE79              	100.00%
Bootstrap support for C0NIH0 as seed ortholog is 100%.
Bootstrap support for D3BE79 as seed ortholog is 100%.

Group of orthologs #234. Best score 512 bits
Score difference with first non-orthologous sequence - A.capsulata:512 P.pallidum:512

C0NPM8              	100.00%		D3B5X2              	100.00%
Bootstrap support for C0NPM8 as seed ortholog is 100%.
Bootstrap support for D3B5X2 as seed ortholog is 100%.

Group of orthologs #235. Best score 512 bits
Score difference with first non-orthologous sequence - A.capsulata:512 P.pallidum:367

C0NY68              	100.00%		D3B2K0              	100.00%
Bootstrap support for C0NY68 as seed ortholog is 100%.
Bootstrap support for D3B2K0 as seed ortholog is 100%.

Group of orthologs #236. Best score 510 bits
Score difference with first non-orthologous sequence - A.capsulata:74 P.pallidum:510

C0NBF3              	100.00%		D3AZM1              	100.00%
Bootstrap support for C0NBF3 as seed ortholog is 97%.
Bootstrap support for D3AZM1 as seed ortholog is 100%.

Group of orthologs #237. Best score 510 bits
Score difference with first non-orthologous sequence - A.capsulata:256 P.pallidum:233

C0NNC3              	100.00%		D3BEH4              	100.00%
Bootstrap support for C0NNC3 as seed ortholog is 100%.
Bootstrap support for D3BEH4 as seed ortholog is 99%.

Group of orthologs #238. Best score 510 bits
Score difference with first non-orthologous sequence - A.capsulata:436 P.pallidum:411

C0NFM9              	100.00%		D3BQ34              	100.00%
Bootstrap support for C0NFM9 as seed ortholog is 100%.
Bootstrap support for D3BQ34 as seed ortholog is 100%.

Group of orthologs #239. Best score 507 bits
Score difference with first non-orthologous sequence - A.capsulata:507 P.pallidum:507

C0NAB0              	100.00%		D3BP87              	100.00%
                    	       		D3BH75              	42.37%
Bootstrap support for C0NAB0 as seed ortholog is 100%.
Bootstrap support for D3BP87 as seed ortholog is 100%.

Group of orthologs #240. Best score 507 bits
Score difference with first non-orthologous sequence - A.capsulata:507 P.pallidum:507

C0NSB3              	100.00%		D3B6S4              	100.00%
Bootstrap support for C0NSB3 as seed ortholog is 100%.
Bootstrap support for D3B6S4 as seed ortholog is 100%.

Group of orthologs #241. Best score 506 bits
Score difference with first non-orthologous sequence - A.capsulata:264 P.pallidum:260

C0NIG0              	100.00%		D3BQP4              	100.00%
Bootstrap support for C0NIG0 as seed ortholog is 100%.
Bootstrap support for D3BQP4 as seed ortholog is 100%.

Group of orthologs #242. Best score 504 bits
Score difference with first non-orthologous sequence - A.capsulata:504 P.pallidum:504

C0ND66              	100.00%		D3BJG8              	100.00%
C0ND88              	8.48%		
Bootstrap support for C0ND66 as seed ortholog is 100%.
Bootstrap support for D3BJG8 as seed ortholog is 100%.

Group of orthologs #243. Best score 503 bits
Score difference with first non-orthologous sequence - A.capsulata:503 P.pallidum:137

C0NNC2              	100.00%		D3B8Z2              	100.00%
C0P0D5              	10.04%		D3BQ49              	24.22%
                    	       		D3BLZ8              	15.92%
Bootstrap support for C0NNC2 as seed ortholog is 100%.
Bootstrap support for D3B8Z2 as seed ortholog is 98%.

Group of orthologs #244. Best score 503 bits
Score difference with first non-orthologous sequence - A.capsulata:503 P.pallidum:503

C0NNS4              	100.00%		D3BA44              	100.00%
Bootstrap support for C0NNS4 as seed ortholog is 100%.
Bootstrap support for D3BA44 as seed ortholog is 100%.

Group of orthologs #245. Best score 503 bits
Score difference with first non-orthologous sequence - A.capsulata:503 P.pallidum:503

C0NWD1              	100.00%		D3BB96              	100.00%
Bootstrap support for C0NWD1 as seed ortholog is 100%.
Bootstrap support for D3BB96 as seed ortholog is 100%.

Group of orthologs #246. Best score 502 bits
Score difference with first non-orthologous sequence - A.capsulata:502 P.pallidum:502

C0NMD6              	100.00%		D3BRT1              	100.00%
Bootstrap support for C0NMD6 as seed ortholog is 100%.
Bootstrap support for D3BRT1 as seed ortholog is 100%.

Group of orthologs #247. Best score 501 bits
Score difference with first non-orthologous sequence - A.capsulata:501 P.pallidum:501

C0NGS1              	100.00%		D3AZ75              	100.00%
Bootstrap support for C0NGS1 as seed ortholog is 100%.
Bootstrap support for D3AZ75 as seed ortholog is 100%.

Group of orthologs #248. Best score 501 bits
Score difference with first non-orthologous sequence - A.capsulata:501 P.pallidum:501

C0NUD1              	100.00%		D3BMN8              	100.00%
Bootstrap support for C0NUD1 as seed ortholog is 100%.
Bootstrap support for D3BMN8 as seed ortholog is 100%.

Group of orthologs #249. Best score 500 bits
Score difference with first non-orthologous sequence - A.capsulata:500 P.pallidum:500

C0NR17              	100.00%		D3BPC0              	100.00%
Bootstrap support for C0NR17 as seed ortholog is 100%.
Bootstrap support for D3BPC0 as seed ortholog is 100%.

Group of orthologs #250. Best score 498 bits
Score difference with first non-orthologous sequence - A.capsulata:498 P.pallidum:498

C0NT96              	100.00%		D3B0J2              	100.00%
C0NKN2              	9.55%		
Bootstrap support for C0NT96 as seed ortholog is 100%.
Bootstrap support for D3B0J2 as seed ortholog is 100%.

Group of orthologs #251. Best score 497 bits
Score difference with first non-orthologous sequence - A.capsulata:497 P.pallidum:497

C0NDQ6              	100.00%		D3B7H9              	100.00%
Bootstrap support for C0NDQ6 as seed ortholog is 100%.
Bootstrap support for D3B7H9 as seed ortholog is 100%.

Group of orthologs #252. Best score 497 bits
Score difference with first non-orthologous sequence - A.capsulata:408 P.pallidum:435

C0NLK3              	100.00%		D3B4F3              	100.00%
Bootstrap support for C0NLK3 as seed ortholog is 100%.
Bootstrap support for D3B4F3 as seed ortholog is 100%.

Group of orthologs #253. Best score 496 bits
Score difference with first non-orthologous sequence - A.capsulata:496 P.pallidum:394

C0NT68              	100.00%		D3AZP8              	100.00%
Bootstrap support for C0NT68 as seed ortholog is 100%.
Bootstrap support for D3AZP8 as seed ortholog is 100%.

Group of orthologs #254. Best score 493 bits
Score difference with first non-orthologous sequence - A.capsulata:493 P.pallidum:493

C0NHP0              	100.00%		D3B7M5              	100.00%
Bootstrap support for C0NHP0 as seed ortholog is 100%.
Bootstrap support for D3B7M5 as seed ortholog is 100%.

Group of orthologs #255. Best score 493 bits
Score difference with first non-orthologous sequence - A.capsulata:493 P.pallidum:493

C0NQT5              	100.00%		D3BN75              	100.00%
Bootstrap support for C0NQT5 as seed ortholog is 100%.
Bootstrap support for D3BN75 as seed ortholog is 100%.

Group of orthologs #256. Best score 490 bits
Score difference with first non-orthologous sequence - A.capsulata:169 P.pallidum:315

C0NSW3              	100.00%		D3BRC2              	100.00%
C0NMH9              	8.02%		
Bootstrap support for C0NSW3 as seed ortholog is 99%.
Bootstrap support for D3BRC2 as seed ortholog is 100%.

Group of orthologs #257. Best score 490 bits
Score difference with first non-orthologous sequence - A.capsulata:490 P.pallidum:490

C0NDZ7              	100.00%		D3B7I3              	100.00%
Bootstrap support for C0NDZ7 as seed ortholog is 100%.
Bootstrap support for D3B7I3 as seed ortholog is 100%.

Group of orthologs #258. Best score 490 bits
Score difference with first non-orthologous sequence - A.capsulata:490 P.pallidum:226

C0NSD3              	100.00%		D3BHJ6              	100.00%
Bootstrap support for C0NSD3 as seed ortholog is 100%.
Bootstrap support for D3BHJ6 as seed ortholog is 99%.

Group of orthologs #259. Best score 489 bits
Score difference with first non-orthologous sequence - A.capsulata:212 P.pallidum:262

C0NV39              	100.00%		D3BK58              	100.00%
Bootstrap support for C0NV39 as seed ortholog is 100%.
Bootstrap support for D3BK58 as seed ortholog is 100%.

Group of orthologs #260. Best score 486 bits
Score difference with first non-orthologous sequence - A.capsulata:486 P.pallidum:82

C0NB93              	100.00%		D3AYB4              	100.00%
Bootstrap support for C0NB93 as seed ortholog is 100%.
Bootstrap support for D3AYB4 as seed ortholog is 96%.

Group of orthologs #261. Best score 486 bits
Score difference with first non-orthologous sequence - A.capsulata:424 P.pallidum:486

C0NJD4              	100.00%		D3B1F9              	100.00%
Bootstrap support for C0NJD4 as seed ortholog is 100%.
Bootstrap support for D3B1F9 as seed ortholog is 100%.

Group of orthologs #262. Best score 485 bits
Score difference with first non-orthologous sequence - A.capsulata:96 P.pallidum:396

C0P090              	100.00%		D3B4P1              	100.00%
Bootstrap support for C0P090 as seed ortholog is 98%.
Bootstrap support for D3B4P1 as seed ortholog is 100%.

Group of orthologs #263. Best score 484 bits
Score difference with first non-orthologous sequence - A.capsulata:408 P.pallidum:288

C0NDX5              	100.00%		D3BEH8              	100.00%
Bootstrap support for C0NDX5 as seed ortholog is 100%.
Bootstrap support for D3BEH8 as seed ortholog is 100%.

Group of orthologs #264. Best score 483 bits
Score difference with first non-orthologous sequence - A.capsulata:483 P.pallidum:483

C0NGR0              	100.00%		D3BCL2              	100.00%
Bootstrap support for C0NGR0 as seed ortholog is 100%.
Bootstrap support for D3BCL2 as seed ortholog is 100%.

Group of orthologs #265. Best score 483 bits
Score difference with first non-orthologous sequence - A.capsulata:404 P.pallidum:306

C0NXH6              	100.00%		D3B161              	100.00%
Bootstrap support for C0NXH6 as seed ortholog is 100%.
Bootstrap support for D3B161 as seed ortholog is 100%.

Group of orthologs #266. Best score 482 bits
Score difference with first non-orthologous sequence - A.capsulata:482 P.pallidum:482

C0NGS5              	100.00%		D3B2S5              	100.00%
C0NMB4              	100.00%		D3BUR5              	100.00%
Bootstrap support for C0NGS5 as seed ortholog is 100%.
Bootstrap support for C0NMB4 as seed ortholog is 100%.
Bootstrap support for D3B2S5 as seed ortholog is 100%.
Bootstrap support for D3BUR5 as seed ortholog is 100%.

Group of orthologs #267. Best score 482 bits
Score difference with first non-orthologous sequence - A.capsulata:482 P.pallidum:482

C0NUD8              	100.00%		D3BE82              	100.00%
Bootstrap support for C0NUD8 as seed ortholog is 100%.
Bootstrap support for D3BE82 as seed ortholog is 100%.

Group of orthologs #268. Best score 480 bits
Score difference with first non-orthologous sequence - A.capsulata:480 P.pallidum:480

C0NV68              	100.00%		D3B9J3              	100.00%
Bootstrap support for C0NV68 as seed ortholog is 100%.
Bootstrap support for D3B9J3 as seed ortholog is 100%.

Group of orthologs #269. Best score 478 bits
Score difference with first non-orthologous sequence - A.capsulata:478 P.pallidum:478

C0NUW2              	100.00%		D3BUM9              	100.00%
                    	       		D3AXQ3              	9.49%
Bootstrap support for C0NUW2 as seed ortholog is 100%.
Bootstrap support for D3BUM9 as seed ortholog is 100%.

Group of orthologs #270. Best score 478 bits
Score difference with first non-orthologous sequence - A.capsulata:478 P.pallidum:478

C0NKS5              	100.00%		D3B9H8              	100.00%
Bootstrap support for C0NKS5 as seed ortholog is 100%.
Bootstrap support for D3B9H8 as seed ortholog is 100%.

Group of orthologs #271. Best score 477 bits
Score difference with first non-orthologous sequence - A.capsulata:477 P.pallidum:477

C0NQG7              	100.00%		D3AY94              	100.00%
Bootstrap support for C0NQG7 as seed ortholog is 100%.
Bootstrap support for D3AY94 as seed ortholog is 100%.

Group of orthologs #272. Best score 476 bits
Score difference with first non-orthologous sequence - A.capsulata:338 P.pallidum:476

C0NFH8              	100.00%		D3AVT5              	100.00%
Bootstrap support for C0NFH8 as seed ortholog is 100%.
Bootstrap support for D3AVT5 as seed ortholog is 100%.

Group of orthologs #273. Best score 476 bits
Score difference with first non-orthologous sequence - A.capsulata:476 P.pallidum:476

C0NH74              	100.00%		D3BBC2              	100.00%
Bootstrap support for C0NH74 as seed ortholog is 100%.
Bootstrap support for D3BBC2 as seed ortholog is 100%.

Group of orthologs #274. Best score 473 bits
Score difference with first non-orthologous sequence - A.capsulata:473 P.pallidum:473

C0NBU1              	100.00%		D3AXG3              	100.00%
Bootstrap support for C0NBU1 as seed ortholog is 100%.
Bootstrap support for D3AXG3 as seed ortholog is 100%.

Group of orthologs #275. Best score 473 bits
Score difference with first non-orthologous sequence - A.capsulata:261 P.pallidum:473

C0NKY0              	100.00%		D3B2V3              	100.00%
Bootstrap support for C0NKY0 as seed ortholog is 100%.
Bootstrap support for D3B2V3 as seed ortholog is 100%.

Group of orthologs #276. Best score 472 bits
Score difference with first non-orthologous sequence - A.capsulata:187 P.pallidum:259

C0NAN2              	100.00%		D3BMB3              	100.00%
C0NT99              	12.54%		
Bootstrap support for C0NAN2 as seed ortholog is 100%.
Bootstrap support for D3BMB3 as seed ortholog is 100%.

Group of orthologs #277. Best score 472 bits
Score difference with first non-orthologous sequence - A.capsulata:392 P.pallidum:249

C0NYI6              	100.00%		D3BT28              	100.00%
C0NJR5              	29.11%		
Bootstrap support for C0NYI6 as seed ortholog is 100%.
Bootstrap support for D3BT28 as seed ortholog is 100%.

Group of orthologs #278. Best score 472 bits
Score difference with first non-orthologous sequence - A.capsulata:321 P.pallidum:349

C0P0H5              	100.00%		D3BJP0              	100.00%
Bootstrap support for C0P0H5 as seed ortholog is 100%.
Bootstrap support for D3BJP0 as seed ortholog is 100%.

Group of orthologs #279. Best score 471 bits
Score difference with first non-orthologous sequence - A.capsulata:325 P.pallidum:334

C0NG26              	100.00%		D3B471              	100.00%
Bootstrap support for C0NG26 as seed ortholog is 100%.
Bootstrap support for D3B471 as seed ortholog is 100%.

Group of orthologs #280. Best score 471 bits
Score difference with first non-orthologous sequence - A.capsulata:471 P.pallidum:471

C0NRN1              	100.00%		D3BV45              	100.00%
Bootstrap support for C0NRN1 as seed ortholog is 100%.
Bootstrap support for D3BV45 as seed ortholog is 100%.

Group of orthologs #281. Best score 469 bits
Score difference with first non-orthologous sequence - A.capsulata:469 P.pallidum:469

C0NFP7              	100.00%		D3AZ34              	100.00%
Bootstrap support for C0NFP7 as seed ortholog is 100%.
Bootstrap support for D3AZ34 as seed ortholog is 100%.

Group of orthologs #282. Best score 469 bits
Score difference with first non-orthologous sequence - A.capsulata:129 P.pallidum:409

C0NGX8              	100.00%		D3BDA3              	100.00%
Bootstrap support for C0NGX8 as seed ortholog is 99%.
Bootstrap support for D3BDA3 as seed ortholog is 100%.

Group of orthologs #283. Best score 467 bits
Score difference with first non-orthologous sequence - A.capsulata:467 P.pallidum:467

C0NYR4              	100.00%		D3B6H9              	100.00%
Bootstrap support for C0NYR4 as seed ortholog is 100%.
Bootstrap support for D3B6H9 as seed ortholog is 100%.

Group of orthologs #284. Best score 467 bits
Score difference with first non-orthologous sequence - A.capsulata:467 P.pallidum:168

C0NTW5              	100.00%		D3BQM3              	100.00%
Bootstrap support for C0NTW5 as seed ortholog is 100%.
Bootstrap support for D3BQM3 as seed ortholog is 93%.

Group of orthologs #285. Best score 465 bits
Score difference with first non-orthologous sequence - A.capsulata:349 P.pallidum:359

C0NQE1              	100.00%		D3B3C8              	100.00%
Bootstrap support for C0NQE1 as seed ortholog is 100%.
Bootstrap support for D3B3C8 as seed ortholog is 100%.

Group of orthologs #286. Best score 465 bits
Score difference with first non-orthologous sequence - A.capsulata:347 P.pallidum:352

C0P165              	100.00%		D3B1H0              	100.00%
Bootstrap support for C0P165 as seed ortholog is 100%.
Bootstrap support for D3B1H0 as seed ortholog is 100%.

Group of orthologs #287. Best score 465 bits
Score difference with first non-orthologous sequence - A.capsulata:143 P.pallidum:83

C0NMW6              	100.00%		D3BTH8              	100.00%
Bootstrap support for C0NMW6 as seed ortholog is 99%.
Bootstrap support for D3BTH8 as seed ortholog is 99%.

Group of orthologs #288. Best score 464 bits
Score difference with first non-orthologous sequence - A.capsulata:68 P.pallidum:227

C0NJ13              	100.00%		D3B4K1              	100.00%
Bootstrap support for C0NJ13 as seed ortholog is 89%.
Bootstrap support for D3B4K1 as seed ortholog is 100%.

Group of orthologs #289. Best score 464 bits
Score difference with first non-orthologous sequence - A.capsulata:464 P.pallidum:464

C0NI53              	100.00%		D3B6E7              	100.00%
Bootstrap support for C0NI53 as seed ortholog is 100%.
Bootstrap support for D3B6E7 as seed ortholog is 100%.

Group of orthologs #290. Best score 464 bits
Score difference with first non-orthologous sequence - A.capsulata:464 P.pallidum:464

C0NM72              	100.00%		D3B2T4              	100.00%
Bootstrap support for C0NM72 as seed ortholog is 100%.
Bootstrap support for D3B2T4 as seed ortholog is 100%.

Group of orthologs #291. Best score 464 bits
Score difference with first non-orthologous sequence - A.capsulata:464 P.pallidum:464

C0NEB4              	100.00%		D3BF15              	100.00%
Bootstrap support for C0NEB4 as seed ortholog is 100%.
Bootstrap support for D3BF15 as seed ortholog is 100%.

Group of orthologs #292. Best score 463 bits
Score difference with first non-orthologous sequence - A.capsulata:463 P.pallidum:463

C0NGI0              	100.00%		D3BAW3              	100.00%
                    	       		D3B6E9              	55.77%
Bootstrap support for C0NGI0 as seed ortholog is 100%.
Bootstrap support for D3BAW3 as seed ortholog is 100%.

Group of orthologs #293. Best score 462 bits
Score difference with first non-orthologous sequence - A.capsulata:462 P.pallidum:462

C0NGZ5              	100.00%		D3BRX9              	100.00%
Bootstrap support for C0NGZ5 as seed ortholog is 100%.
Bootstrap support for D3BRX9 as seed ortholog is 100%.

Group of orthologs #294. Best score 459 bits
Score difference with first non-orthologous sequence - A.capsulata:459 P.pallidum:459

C0NQK6              	100.00%		D3B298              	100.00%
Bootstrap support for C0NQK6 as seed ortholog is 100%.
Bootstrap support for D3B298 as seed ortholog is 100%.

Group of orthologs #295. Best score 458 bits
Score difference with first non-orthologous sequence - A.capsulata:458 P.pallidum:458

C0NIT5              	100.00%		D3B268              	100.00%
Bootstrap support for C0NIT5 as seed ortholog is 100%.
Bootstrap support for D3B268 as seed ortholog is 100%.

Group of orthologs #296. Best score 458 bits
Score difference with first non-orthologous sequence - A.capsulata:160 P.pallidum:126

C0NAF4              	100.00%		D3BSG3              	100.00%
Bootstrap support for C0NAF4 as seed ortholog is 99%.
Bootstrap support for D3BSG3 as seed ortholog is 99%.

Group of orthologs #297. Best score 457 bits
Score difference with first non-orthologous sequence - A.capsulata:457 P.pallidum:457

C0NTK0              	100.00%		D3B796              	100.00%
Bootstrap support for C0NTK0 as seed ortholog is 100%.
Bootstrap support for D3B796 as seed ortholog is 100%.

Group of orthologs #298. Best score 454 bits
Score difference with first non-orthologous sequence - A.capsulata:73 P.pallidum:381

C0NIQ4              	100.00%		D3BB47              	100.00%
Bootstrap support for C0NIQ4 as seed ortholog is 98%.
Bootstrap support for D3BB47 as seed ortholog is 100%.

Group of orthologs #299. Best score 454 bits
Score difference with first non-orthologous sequence - A.capsulata:454 P.pallidum:369

C0NP94              	100.00%		D3BC91              	100.00%
Bootstrap support for C0NP94 as seed ortholog is 100%.
Bootstrap support for D3BC91 as seed ortholog is 100%.

Group of orthologs #300. Best score 453 bits
Score difference with first non-orthologous sequence - A.capsulata:453 P.pallidum:453

C0NYJ3              	100.00%		D3B8W3              	100.00%
C0NQN2              	33.47%		
Bootstrap support for C0NYJ3 as seed ortholog is 100%.
Bootstrap support for D3B8W3 as seed ortholog is 100%.

Group of orthologs #301. Best score 453 bits
Score difference with first non-orthologous sequence - A.capsulata:453 P.pallidum:453

C0NG18              	100.00%		D3BKR5              	100.00%
Bootstrap support for C0NG18 as seed ortholog is 100%.
Bootstrap support for D3BKR5 as seed ortholog is 100%.

Group of orthologs #302. Best score 453 bits
Score difference with first non-orthologous sequence - A.capsulata:179 P.pallidum:357

C0NJA3              	100.00%		D3BI15              	100.00%
Bootstrap support for C0NJA3 as seed ortholog is 100%.
Bootstrap support for D3BI15 as seed ortholog is 100%.

Group of orthologs #303. Best score 453 bits
Score difference with first non-orthologous sequence - A.capsulata:453 P.pallidum:453

C0NQJ1              	100.00%		D3BPD5              	100.00%
Bootstrap support for C0NQJ1 as seed ortholog is 100%.
Bootstrap support for D3BPD5 as seed ortholog is 100%.

Group of orthologs #304. Best score 451 bits
Score difference with first non-orthologous sequence - A.capsulata:451 P.pallidum:451

C0NFK8              	100.00%		D3BUD7              	100.00%
                    	       		D3BKB8              	21.93%
Bootstrap support for C0NFK8 as seed ortholog is 100%.
Bootstrap support for D3BUD7 as seed ortholog is 100%.

Group of orthologs #305. Best score 451 bits
Score difference with first non-orthologous sequence - A.capsulata:386 P.pallidum:190

C0NSS5              	100.00%		D3AVQ3              	100.00%
Bootstrap support for C0NSS5 as seed ortholog is 100%.
Bootstrap support for D3AVQ3 as seed ortholog is 99%.

Group of orthologs #306. Best score 450 bits
Score difference with first non-orthologous sequence - A.capsulata:214 P.pallidum:238

C0NHT4              	100.00%		D3BNB9              	100.00%
Bootstrap support for C0NHT4 as seed ortholog is 100%.
Bootstrap support for D3BNB9 as seed ortholog is 99%.

Group of orthologs #307. Best score 447 bits
Score difference with first non-orthologous sequence - A.capsulata:447 P.pallidum:447

C0NEE8              	100.00%		D3B1M1              	100.00%
Bootstrap support for C0NEE8 as seed ortholog is 100%.
Bootstrap support for D3B1M1 as seed ortholog is 100%.

Group of orthologs #308. Best score 447 bits
Score difference with first non-orthologous sequence - A.capsulata:299 P.pallidum:447

C0NXY6              	100.00%		D3B5Y1              	100.00%
Bootstrap support for C0NXY6 as seed ortholog is 100%.
Bootstrap support for D3B5Y1 as seed ortholog is 100%.

Group of orthologs #309. Best score 446 bits
Score difference with first non-orthologous sequence - A.capsulata:56 P.pallidum:215

C0NX00              	100.00%		D3BRA7              	100.00%
Bootstrap support for C0NX00 as seed ortholog is 85%.
Bootstrap support for D3BRA7 as seed ortholog is 99%.

Group of orthologs #310. Best score 445 bits
Score difference with first non-orthologous sequence - A.capsulata:445 P.pallidum:445

C0NEL3              	100.00%		D3AY61              	100.00%
Bootstrap support for C0NEL3 as seed ortholog is 100%.
Bootstrap support for D3AY61 as seed ortholog is 100%.

Group of orthologs #311. Best score 445 bits
Score difference with first non-orthologous sequence - A.capsulata:374 P.pallidum:445

C0NZW4              	100.00%		D3AXJ0              	100.00%
Bootstrap support for C0NZW4 as seed ortholog is 100%.
Bootstrap support for D3AXJ0 as seed ortholog is 100%.

Group of orthologs #312. Best score 444 bits
Score difference with first non-orthologous sequence - A.capsulata:365 P.pallidum:332

C0NJ63              	100.00%		D3AVR8              	100.00%
Bootstrap support for C0NJ63 as seed ortholog is 100%.
Bootstrap support for D3AVR8 as seed ortholog is 100%.

Group of orthologs #313. Best score 444 bits
Score difference with first non-orthologous sequence - A.capsulata:444 P.pallidum:330

C0NJ54              	100.00%		D3B7P5              	100.00%
Bootstrap support for C0NJ54 as seed ortholog is 100%.
Bootstrap support for D3B7P5 as seed ortholog is 100%.

Group of orthologs #314. Best score 443 bits
Score difference with first non-orthologous sequence - A.capsulata:242 P.pallidum:249

C0NF35              	100.00%		D3B6C6              	100.00%
Bootstrap support for C0NF35 as seed ortholog is 100%.
Bootstrap support for D3B6C6 as seed ortholog is 100%.

Group of orthologs #315. Best score 442 bits
Score difference with first non-orthologous sequence - A.capsulata:327 P.pallidum:83

C0NN87              	100.00%		D3B962              	100.00%
Bootstrap support for C0NN87 as seed ortholog is 100%.
Bootstrap support for D3B962 as seed ortholog is 98%.

Group of orthologs #316. Best score 441 bits
Score difference with first non-orthologous sequence - A.capsulata:441 P.pallidum:441

C0NXP6              	100.00%		D3B481              	100.00%
Bootstrap support for C0NXP6 as seed ortholog is 100%.
Bootstrap support for D3B481 as seed ortholog is 100%.

Group of orthologs #317. Best score 441 bits
Score difference with first non-orthologous sequence - A.capsulata:441 P.pallidum:441

C0NTR5              	100.00%		D3BBV3              	100.00%
Bootstrap support for C0NTR5 as seed ortholog is 100%.
Bootstrap support for D3BBV3 as seed ortholog is 100%.

Group of orthologs #318. Best score 440 bits
Score difference with first non-orthologous sequence - A.capsulata:440 P.pallidum:440

C0NW18              	100.00%		D3B1P9              	100.00%
Bootstrap support for C0NW18 as seed ortholog is 100%.
Bootstrap support for D3B1P9 as seed ortholog is 100%.

Group of orthologs #319. Best score 440 bits
Score difference with first non-orthologous sequence - A.capsulata:440 P.pallidum:440

C0NTB9              	100.00%		D3BNT9              	100.00%
Bootstrap support for C0NTB9 as seed ortholog is 100%.
Bootstrap support for D3BNT9 as seed ortholog is 100%.

Group of orthologs #320. Best score 438 bits
Score difference with first non-orthologous sequence - A.capsulata:438 P.pallidum:438

C0NF46              	100.00%		D3AY91              	100.00%
Bootstrap support for C0NF46 as seed ortholog is 100%.
Bootstrap support for D3AY91 as seed ortholog is 100%.

Group of orthologs #321. Best score 438 bits
Score difference with first non-orthologous sequence - A.capsulata:438 P.pallidum:215

C0NRD4              	100.00%		D3BCI5              	100.00%
Bootstrap support for C0NRD4 as seed ortholog is 100%.
Bootstrap support for D3BCI5 as seed ortholog is 100%.

Group of orthologs #322. Best score 437 bits
Score difference with first non-orthologous sequence - A.capsulata:363 P.pallidum:353

C0NJR8              	100.00%		D3BCL5              	100.00%
Bootstrap support for C0NJR8 as seed ortholog is 100%.
Bootstrap support for D3BCL5 as seed ortholog is 100%.

Group of orthologs #323. Best score 436 bits
Score difference with first non-orthologous sequence - A.capsulata:337 P.pallidum:283

C0NXJ2              	100.00%		D3AVV8              	100.00%
Bootstrap support for C0NXJ2 as seed ortholog is 100%.
Bootstrap support for D3AVV8 as seed ortholog is 100%.

Group of orthologs #324. Best score 436 bits
Score difference with first non-orthologous sequence - A.capsulata:436 P.pallidum:218

C0NNB4              	100.00%		D3BNT7              	100.00%
Bootstrap support for C0NNB4 as seed ortholog is 100%.
Bootstrap support for D3BNT7 as seed ortholog is 100%.

Group of orthologs #325. Best score 434 bits
Score difference with first non-orthologous sequence - A.capsulata:262 P.pallidum:434

C0NIP7              	100.00%		D3BGV3              	100.00%
Bootstrap support for C0NIP7 as seed ortholog is 100%.
Bootstrap support for D3BGV3 as seed ortholog is 100%.

Group of orthologs #326. Best score 434 bits
Score difference with first non-orthologous sequence - A.capsulata:434 P.pallidum:434

C0NWC5              	100.00%		D3B866              	100.00%
Bootstrap support for C0NWC5 as seed ortholog is 100%.
Bootstrap support for D3B866 as seed ortholog is 100%.

Group of orthologs #327. Best score 433 bits
Score difference with first non-orthologous sequence - A.capsulata:433 P.pallidum:6

C0NH66              	100.00%		D3B4X1              	100.00%
Bootstrap support for C0NH66 as seed ortholog is 100%.
Bootstrap support for D3B4X1 as seed ortholog is 54%.
Alternative seed ortholog is D3AVP3 (6 bits away from this cluster)

Group of orthologs #328. Best score 433 bits
Score difference with first non-orthologous sequence - A.capsulata:433 P.pallidum:433

C0NZT7              	100.00%		D3BQC3              	100.00%
Bootstrap support for C0NZT7 as seed ortholog is 100%.
Bootstrap support for D3BQC3 as seed ortholog is 100%.

Group of orthologs #329. Best score 432 bits
Score difference with first non-orthologous sequence - A.capsulata:432 P.pallidum:347

C0NIA2              	100.00%		D3BE54              	100.00%
                    	       		D3BBB8              	18.99%
Bootstrap support for C0NIA2 as seed ortholog is 100%.
Bootstrap support for D3BE54 as seed ortholog is 100%.

Group of orthologs #330. Best score 431 bits
Score difference with first non-orthologous sequence - A.capsulata:85 P.pallidum:76

C0NNW3              	100.00%		D3B5H0              	100.00%
Bootstrap support for C0NNW3 as seed ortholog is 99%.
Bootstrap support for D3B5H0 as seed ortholog is 99%.

Group of orthologs #331. Best score 431 bits
Score difference with first non-orthologous sequence - A.capsulata:64 P.pallidum:33

C0NFQ6              	100.00%		D3BLI7              	100.00%
Bootstrap support for C0NFQ6 as seed ortholog is 99%.
Bootstrap support for D3BLI7 as seed ortholog is 87%.

Group of orthologs #332. Best score 430 bits
Score difference with first non-orthologous sequence - A.capsulata:131 P.pallidum:166

C0NY00              	100.00%		D3BKA7              	100.00%
Bootstrap support for C0NY00 as seed ortholog is 99%.
Bootstrap support for D3BKA7 as seed ortholog is 99%.

Group of orthologs #333. Best score 428 bits
Score difference with first non-orthologous sequence - A.capsulata:428 P.pallidum:428

C0NE91              	100.00%		D3BEX2              	100.00%
Bootstrap support for C0NE91 as seed ortholog is 100%.
Bootstrap support for D3BEX2 as seed ortholog is 100%.

Group of orthologs #334. Best score 428 bits
Score difference with first non-orthologous sequence - A.capsulata:428 P.pallidum:154

C0NGL5              	100.00%		D3BKZ9              	100.00%
Bootstrap support for C0NGL5 as seed ortholog is 100%.
Bootstrap support for D3BKZ9 as seed ortholog is 99%.

Group of orthologs #335. Best score 427 bits
Score difference with first non-orthologous sequence - A.capsulata:331 P.pallidum:427

C0NMB5              	100.00%		D3B7D2              	100.00%
Bootstrap support for C0NMB5 as seed ortholog is 100%.
Bootstrap support for D3B7D2 as seed ortholog is 100%.

Group of orthologs #336. Best score 426 bits
Score difference with first non-orthologous sequence - A.capsulata:426 P.pallidum:426

C0NBQ1              	100.00%		D3AWC6              	100.00%
Bootstrap support for C0NBQ1 as seed ortholog is 100%.
Bootstrap support for D3AWC6 as seed ortholog is 100%.

Group of orthologs #337. Best score 425 bits
Score difference with first non-orthologous sequence - A.capsulata:335 P.pallidum:425

C0NE90              	100.00%		D3BSP0              	100.00%
Bootstrap support for C0NE90 as seed ortholog is 100%.
Bootstrap support for D3BSP0 as seed ortholog is 100%.

Group of orthologs #338. Best score 424 bits
Score difference with first non-orthologous sequence - A.capsulata:424 P.pallidum:333

C0NN35              	100.00%		D3B6G4              	100.00%
Bootstrap support for C0NN35 as seed ortholog is 100%.
Bootstrap support for D3B6G4 as seed ortholog is 100%.

Group of orthologs #339. Best score 423 bits
Score difference with first non-orthologous sequence - A.capsulata:423 P.pallidum:317

C0NLP1              	100.00%		D3BR29              	100.00%
C0NAY2              	11.40%		
Bootstrap support for C0NLP1 as seed ortholog is 100%.
Bootstrap support for D3BR29 as seed ortholog is 100%.

Group of orthologs #340. Best score 423 bits
Score difference with first non-orthologous sequence - A.capsulata:423 P.pallidum:423

C0NI02              	100.00%		D3BUD8              	100.00%
Bootstrap support for C0NI02 as seed ortholog is 100%.
Bootstrap support for D3BUD8 as seed ortholog is 100%.

Group of orthologs #341. Best score 422 bits
Score difference with first non-orthologous sequence - A.capsulata:422 P.pallidum:422

C0NFB5              	100.00%		D3B1Z3              	100.00%
Bootstrap support for C0NFB5 as seed ortholog is 100%.
Bootstrap support for D3B1Z3 as seed ortholog is 100%.

Group of orthologs #342. Best score 422 bits
Score difference with first non-orthologous sequence - A.capsulata:422 P.pallidum:422

C0NJR6              	100.00%		D3BAR8              	100.00%
Bootstrap support for C0NJR6 as seed ortholog is 100%.
Bootstrap support for D3BAR8 as seed ortholog is 100%.

Group of orthologs #343. Best score 422 bits
Score difference with first non-orthologous sequence - A.capsulata:422 P.pallidum:247

C0NR45              	100.00%		D3BM76              	100.00%
Bootstrap support for C0NR45 as seed ortholog is 100%.
Bootstrap support for D3BM76 as seed ortholog is 100%.

Group of orthologs #344. Best score 421 bits
Score difference with first non-orthologous sequence - A.capsulata:421 P.pallidum:421

C0NA60              	100.00%		D3AVN9              	100.00%
Bootstrap support for C0NA60 as seed ortholog is 100%.
Bootstrap support for D3AVN9 as seed ortholog is 100%.

Group of orthologs #345. Best score 419 bits
Score difference with first non-orthologous sequence - A.capsulata:419 P.pallidum:338

C0NQL4              	100.00%		D3B6R2              	100.00%
Bootstrap support for C0NQL4 as seed ortholog is 100%.
Bootstrap support for D3B6R2 as seed ortholog is 100%.

Group of orthologs #346. Best score 418 bits
Score difference with first non-orthologous sequence - A.capsulata:418 P.pallidum:418

C0NVJ0              	100.00%		D3B6X8              	100.00%
Bootstrap support for C0NVJ0 as seed ortholog is 100%.
Bootstrap support for D3B6X8 as seed ortholog is 100%.

Group of orthologs #347. Best score 418 bits
Score difference with first non-orthologous sequence - A.capsulata:418 P.pallidum:418

C0NIB8              	100.00%		D3BN16              	100.00%
Bootstrap support for C0NIB8 as seed ortholog is 100%.
Bootstrap support for D3BN16 as seed ortholog is 100%.

Group of orthologs #348. Best score 415 bits
Score difference with first non-orthologous sequence - A.capsulata:415 P.pallidum:150

C0NN26              	100.00%		D3BHU2              	100.00%
Bootstrap support for C0NN26 as seed ortholog is 100%.
Bootstrap support for D3BHU2 as seed ortholog is 99%.

Group of orthologs #349. Best score 415 bits
Score difference with first non-orthologous sequence - A.capsulata:415 P.pallidum:415

C0NR50              	100.00%		D3BMS6              	100.00%
Bootstrap support for C0NR50 as seed ortholog is 100%.
Bootstrap support for D3BMS6 as seed ortholog is 100%.

Group of orthologs #350. Best score 412 bits
Score difference with first non-orthologous sequence - A.capsulata:359 P.pallidum:229

C0NVN2              	100.00%		D3AXY2              	100.00%
Bootstrap support for C0NVN2 as seed ortholog is 100%.
Bootstrap support for D3AXY2 as seed ortholog is 100%.

Group of orthologs #351. Best score 412 bits
Score difference with first non-orthologous sequence - A.capsulata:412 P.pallidum:412

C0NZZ0              	100.00%		D3BPW9              	100.00%
Bootstrap support for C0NZZ0 as seed ortholog is 100%.
Bootstrap support for D3BPW9 as seed ortholog is 100%.

Group of orthologs #352. Best score 411 bits
Score difference with first non-orthologous sequence - A.capsulata:341 P.pallidum:335

C0NXM8              	100.00%		D3AYY7              	100.00%
Bootstrap support for C0NXM8 as seed ortholog is 100%.
Bootstrap support for D3AYY7 as seed ortholog is 100%.

Group of orthologs #353. Best score 410 bits
Score difference with first non-orthologous sequence - A.capsulata:410 P.pallidum:410

C0NLE5              	100.00%		D3BJD9              	100.00%
                    	       		D3BU44              	7.28%
Bootstrap support for C0NLE5 as seed ortholog is 100%.
Bootstrap support for D3BJD9 as seed ortholog is 100%.

Group of orthologs #354. Best score 409 bits
Score difference with first non-orthologous sequence - A.capsulata:409 P.pallidum:409

C0P194              	100.00%		D3BKC5              	100.00%
Bootstrap support for C0P194 as seed ortholog is 100%.
Bootstrap support for D3BKC5 as seed ortholog is 100%.

Group of orthologs #355. Best score 407 bits
Score difference with first non-orthologous sequence - A.capsulata:407 P.pallidum:407

C0NZT8              	100.00%		D3B344              	100.00%
Bootstrap support for C0NZT8 as seed ortholog is 100%.
Bootstrap support for D3B344 as seed ortholog is 100%.

Group of orthologs #356. Best score 406 bits
Score difference with first non-orthologous sequence - A.capsulata:406 P.pallidum:406

C0NWU6              	100.00%		D3B6L3              	100.00%
Bootstrap support for C0NWU6 as seed ortholog is 100%.
Bootstrap support for D3B6L3 as seed ortholog is 100%.

Group of orthologs #357. Best score 406 bits
Score difference with first non-orthologous sequence - A.capsulata:406 P.pallidum:406

C0NME4              	100.00%		D3BR30              	100.00%
Bootstrap support for C0NME4 as seed ortholog is 100%.
Bootstrap support for D3BR30 as seed ortholog is 100%.

Group of orthologs #358. Best score 405 bits
Score difference with first non-orthologous sequence - A.capsulata:206 P.pallidum:299

C0NQ23              	100.00%		D3B6H6              	100.00%
Bootstrap support for C0NQ23 as seed ortholog is 100%.
Bootstrap support for D3B6H6 as seed ortholog is 100%.

Group of orthologs #359. Best score 404 bits
Score difference with first non-orthologous sequence - A.capsulata:404 P.pallidum:404

C0NNM5              	100.00%		D3AVW9              	100.00%
Bootstrap support for C0NNM5 as seed ortholog is 100%.
Bootstrap support for D3AVW9 as seed ortholog is 100%.

Group of orthologs #360. Best score 403 bits
Score difference with first non-orthologous sequence - A.capsulata:403 P.pallidum:403

C0NRL6              	100.00%		D3AXR9              	100.00%
C0NX33              	27.04%		
Bootstrap support for C0NRL6 as seed ortholog is 100%.
Bootstrap support for D3AXR9 as seed ortholog is 100%.

Group of orthologs #361. Best score 403 bits
Score difference with first non-orthologous sequence - A.capsulata:18 P.pallidum:133

C0NBX5              	100.00%		D3BEH3              	100.00%
Bootstrap support for C0NBX5 as seed ortholog is 76%.
Bootstrap support for D3BEH3 as seed ortholog is 99%.

Group of orthologs #362. Best score 403 bits
Score difference with first non-orthologous sequence - A.capsulata:128 P.pallidum:403

C0NNC6              	100.00%		D3BH81              	100.00%
Bootstrap support for C0NNC6 as seed ortholog is 98%.
Bootstrap support for D3BH81 as seed ortholog is 100%.

Group of orthologs #363. Best score 402 bits
Score difference with first non-orthologous sequence - A.capsulata:402 P.pallidum:402

C0ND63              	100.00%		D3BFF5              	100.00%
Bootstrap support for C0ND63 as seed ortholog is 100%.
Bootstrap support for D3BFF5 as seed ortholog is 100%.

Group of orthologs #364. Best score 401 bits
Score difference with first non-orthologous sequence - A.capsulata:401 P.pallidum:316

C0NPL3              	100.00%		D3AWP9              	100.00%
Bootstrap support for C0NPL3 as seed ortholog is 100%.
Bootstrap support for D3AWP9 as seed ortholog is 100%.

Group of orthologs #365. Best score 401 bits
Score difference with first non-orthologous sequence - A.capsulata:54 P.pallidum:401

C0NNK4              	100.00%		D3BK71              	100.00%
Bootstrap support for C0NNK4 as seed ortholog is 94%.
Bootstrap support for D3BK71 as seed ortholog is 100%.

Group of orthologs #366. Best score 400 bits
Score difference with first non-orthologous sequence - A.capsulata:245 P.pallidum:137

C0NYA4              	100.00%		D3AVS0              	100.00%
C0NK62              	32.14%		
Bootstrap support for C0NYA4 as seed ortholog is 99%.
Bootstrap support for D3AVS0 as seed ortholog is 99%.

Group of orthologs #367. Best score 399 bits
Score difference with first non-orthologous sequence - A.capsulata:399 P.pallidum:399

C0NRZ7              	100.00%		D3B0C2              	100.00%
                    	       		D3AZN2              	47.03%
Bootstrap support for C0NRZ7 as seed ortholog is 100%.
Bootstrap support for D3B0C2 as seed ortholog is 100%.

Group of orthologs #368. Best score 399 bits
Score difference with first non-orthologous sequence - A.capsulata:399 P.pallidum:399

C0NIW2              	100.00%		D3BNZ1              	100.00%
Bootstrap support for C0NIW2 as seed ortholog is 100%.
Bootstrap support for D3BNZ1 as seed ortholog is 100%.

Group of orthologs #369. Best score 399 bits
Score difference with first non-orthologous sequence - A.capsulata:399 P.pallidum:399

C0NHJ7              	100.00%		D3BRT9              	100.00%
Bootstrap support for C0NHJ7 as seed ortholog is 100%.
Bootstrap support for D3BRT9 as seed ortholog is 100%.

Group of orthologs #370. Best score 398 bits
Score difference with first non-orthologous sequence - A.capsulata:398 P.pallidum:398

C0NGH3              	100.00%		D3AY97              	100.00%
Bootstrap support for C0NGH3 as seed ortholog is 100%.
Bootstrap support for D3AY97 as seed ortholog is 100%.

Group of orthologs #371. Best score 398 bits
Score difference with first non-orthologous sequence - A.capsulata:398 P.pallidum:398

C0NGT8              	100.00%		D3BA88              	100.00%
Bootstrap support for C0NGT8 as seed ortholog is 100%.
Bootstrap support for D3BA88 as seed ortholog is 100%.

Group of orthologs #372. Best score 397 bits
Score difference with first non-orthologous sequence - A.capsulata:397 P.pallidum:397

C0NSB0              	100.00%		D3B072              	100.00%
Bootstrap support for C0NSB0 as seed ortholog is 100%.
Bootstrap support for D3B072 as seed ortholog is 100%.

Group of orthologs #373. Best score 397 bits
Score difference with first non-orthologous sequence - A.capsulata:397 P.pallidum:397

C0NCW5              	100.00%		D3BUT9              	100.00%
Bootstrap support for C0NCW5 as seed ortholog is 100%.
Bootstrap support for D3BUT9 as seed ortholog is 100%.

Group of orthologs #374. Best score 397 bits
Score difference with first non-orthologous sequence - A.capsulata:281 P.pallidum:281

C0NSM0              	100.00%		D3BFF8              	100.00%
Bootstrap support for C0NSM0 as seed ortholog is 100%.
Bootstrap support for D3BFF8 as seed ortholog is 100%.

Group of orthologs #375. Best score 396 bits
Score difference with first non-orthologous sequence - A.capsulata:396 P.pallidum:396

C0NMN3              	100.00%		D3BDL9              	100.00%
                    	       		D3BUG8              	22.68%
                    	       		D3BUG6              	12.48%
Bootstrap support for C0NMN3 as seed ortholog is 100%.
Bootstrap support for D3BDL9 as seed ortholog is 100%.

Group of orthologs #376. Best score 396 bits
Score difference with first non-orthologous sequence - A.capsulata:216 P.pallidum:396

C0NEJ7              	100.00%		D3BD10              	100.00%
Bootstrap support for C0NEJ7 as seed ortholog is 99%.
Bootstrap support for D3BD10 as seed ortholog is 100%.

Group of orthologs #377. Best score 396 bits
Score difference with first non-orthologous sequence - A.capsulata:396 P.pallidum:396

C0NDZ9              	100.00%		D3BPW8              	100.00%
Bootstrap support for C0NDZ9 as seed ortholog is 100%.
Bootstrap support for D3BPW8 as seed ortholog is 100%.

Group of orthologs #378. Best score 396 bits
Score difference with first non-orthologous sequence - A.capsulata:396 P.pallidum:396

C0NS14              	100.00%		D3BDI3              	100.00%
Bootstrap support for C0NS14 as seed ortholog is 100%.
Bootstrap support for D3BDI3 as seed ortholog is 100%.

Group of orthologs #379. Best score 396 bits
Score difference with first non-orthologous sequence - A.capsulata:396 P.pallidum:164

C0NYV3              	100.00%		D3B9Y8              	100.00%
Bootstrap support for C0NYV3 as seed ortholog is 100%.
Bootstrap support for D3B9Y8 as seed ortholog is 99%.

Group of orthologs #380. Best score 395 bits
Score difference with first non-orthologous sequence - A.capsulata:80 P.pallidum:106

C0ND96              	100.00%		D3B9A5              	100.00%
Bootstrap support for C0ND96 as seed ortholog is 88%.
Bootstrap support for D3B9A5 as seed ortholog is 98%.

Group of orthologs #381. Best score 394 bits
Score difference with first non-orthologous sequence - A.capsulata:394 P.pallidum:394

C0NVD3              	100.00%		D3BEF3              	100.00%
Bootstrap support for C0NVD3 as seed ortholog is 100%.
Bootstrap support for D3BEF3 as seed ortholog is 100%.

Group of orthologs #382. Best score 393 bits
Score difference with first non-orthologous sequence - A.capsulata:393 P.pallidum:393

C0NIB6              	100.00%		D3B512              	100.00%
Bootstrap support for C0NIB6 as seed ortholog is 100%.
Bootstrap support for D3B512 as seed ortholog is 100%.

Group of orthologs #383. Best score 393 bits
Score difference with first non-orthologous sequence - A.capsulata:100 P.pallidum:146

C0NFW6              	100.00%		D3BFM3              	100.00%
Bootstrap support for C0NFW6 as seed ortholog is 99%.
Bootstrap support for D3BFM3 as seed ortholog is 100%.

Group of orthologs #384. Best score 393 bits
Score difference with first non-orthologous sequence - A.capsulata:393 P.pallidum:393

C0NLX2              	100.00%		D3BED6              	100.00%
Bootstrap support for C0NLX2 as seed ortholog is 100%.
Bootstrap support for D3BED6 as seed ortholog is 100%.

Group of orthologs #385. Best score 392 bits
Score difference with first non-orthologous sequence - A.capsulata:74 P.pallidum:392

C0NDG1              	100.00%		D3BV36              	100.00%
                    	       		D3B2K8              	7.45%
Bootstrap support for C0NDG1 as seed ortholog is 95%.
Bootstrap support for D3BV36 as seed ortholog is 100%.

Group of orthologs #386. Best score 392 bits
Score difference with first non-orthologous sequence - A.capsulata:392 P.pallidum:392

C0NL18              	100.00%		D3BTQ4              	100.00%
Bootstrap support for C0NL18 as seed ortholog is 100%.
Bootstrap support for D3BTQ4 as seed ortholog is 100%.

Group of orthologs #387. Best score 391 bits
Score difference with first non-orthologous sequence - A.capsulata:391 P.pallidum:391

C0NBD1              	100.00%		D3BCX3              	100.00%
Bootstrap support for C0NBD1 as seed ortholog is 100%.
Bootstrap support for D3BCX3 as seed ortholog is 100%.

Group of orthologs #388. Best score 391 bits
Score difference with first non-orthologous sequence - A.capsulata:391 P.pallidum:161

C0NED0              	100.00%		D3BEC2              	100.00%
Bootstrap support for C0NED0 as seed ortholog is 100%.
Bootstrap support for D3BEC2 as seed ortholog is 99%.

Group of orthologs #389. Best score 390 bits
Score difference with first non-orthologous sequence - A.capsulata:255 P.pallidum:390

C0NRW7              	100.00%		D3AZG6              	100.00%
Bootstrap support for C0NRW7 as seed ortholog is 100%.
Bootstrap support for D3AZG6 as seed ortholog is 100%.

Group of orthologs #390. Best score 390 bits
Score difference with first non-orthologous sequence - A.capsulata:390 P.pallidum:390

C0NRQ1              	100.00%		D3B2S4              	100.00%
Bootstrap support for C0NRQ1 as seed ortholog is 100%.
Bootstrap support for D3B2S4 as seed ortholog is 100%.

Group of orthologs #391. Best score 390 bits
Score difference with first non-orthologous sequence - A.capsulata:390 P.pallidum:390

C0NEP5              	100.00%		D3BQ86              	100.00%
Bootstrap support for C0NEP5 as seed ortholog is 100%.
Bootstrap support for D3BQ86 as seed ortholog is 100%.

Group of orthologs #392. Best score 390 bits
Score difference with first non-orthologous sequence - A.capsulata:390 P.pallidum:390

C0NZD5              	100.00%		D3BFI2              	100.00%
Bootstrap support for C0NZD5 as seed ortholog is 100%.
Bootstrap support for D3BFI2 as seed ortholog is 100%.

Group of orthologs #393. Best score 389 bits
Score difference with first non-orthologous sequence - A.capsulata:167 P.pallidum:51

C0NY44              	100.00%		D3AW75              	100.00%
Bootstrap support for C0NY44 as seed ortholog is 99%.
Bootstrap support for D3AW75 as seed ortholog is 87%.

Group of orthologs #394. Best score 388 bits
Score difference with first non-orthologous sequence - A.capsulata:197 P.pallidum:289

C0NF10              	100.00%		D3BNV2              	100.00%
Bootstrap support for C0NF10 as seed ortholog is 100%.
Bootstrap support for D3BNV2 as seed ortholog is 100%.

Group of orthologs #395. Best score 388 bits
Score difference with first non-orthologous sequence - A.capsulata:200 P.pallidum:388

C0NHH1              	100.00%		D3BMW4              	100.00%
Bootstrap support for C0NHH1 as seed ortholog is 99%.
Bootstrap support for D3BMW4 as seed ortholog is 100%.

Group of orthologs #396. Best score 387 bits
Score difference with first non-orthologous sequence - A.capsulata:195 P.pallidum:258

C0NEW1              	100.00%		D3B6D9              	100.00%
Bootstrap support for C0NEW1 as seed ortholog is 100%.
Bootstrap support for D3B6D9 as seed ortholog is 100%.

Group of orthologs #397. Best score 386 bits
Score difference with first non-orthologous sequence - A.capsulata:386 P.pallidum:386

C0NK86              	100.00%		D3B6W1              	100.00%
Bootstrap support for C0NK86 as seed ortholog is 100%.
Bootstrap support for D3B6W1 as seed ortholog is 100%.

Group of orthologs #398. Best score 386 bits
Score difference with first non-orthologous sequence - A.capsulata:386 P.pallidum:386

C0NP87              	100.00%		D3B6X9              	100.00%
Bootstrap support for C0NP87 as seed ortholog is 100%.
Bootstrap support for D3B6X9 as seed ortholog is 100%.

Group of orthologs #399. Best score 386 bits
Score difference with first non-orthologous sequence - A.capsulata:285 P.pallidum:139

C0NT69              	100.00%		D3BBV0              	100.00%
Bootstrap support for C0NT69 as seed ortholog is 100%.
Bootstrap support for D3BBV0 as seed ortholog is 100%.

Group of orthologs #400. Best score 386 bits
Score difference with first non-orthologous sequence - A.capsulata:386 P.pallidum:386

C0NZ91              	100.00%		D3BV44              	100.00%
Bootstrap support for C0NZ91 as seed ortholog is 100%.
Bootstrap support for D3BV44 as seed ortholog is 100%.

Group of orthologs #401. Best score 385 bits
Score difference with first non-orthologous sequence - A.capsulata:385 P.pallidum:385

C0NSV1              	100.00%		D3AVG7              	100.00%
Bootstrap support for C0NSV1 as seed ortholog is 100%.
Bootstrap support for D3AVG7 as seed ortholog is 100%.

Group of orthologs #402. Best score 385 bits
Score difference with first non-orthologous sequence - A.capsulata:385 P.pallidum:385

C0NDD0              	100.00%		D3BAH3              	100.00%
Bootstrap support for C0NDD0 as seed ortholog is 100%.
Bootstrap support for D3BAH3 as seed ortholog is 100%.

Group of orthologs #403. Best score 383 bits
Score difference with first non-orthologous sequence - A.capsulata:383 P.pallidum:383

C0NYL2              	100.00%		D3AWL5              	100.00%
Bootstrap support for C0NYL2 as seed ortholog is 100%.
Bootstrap support for D3AWL5 as seed ortholog is 100%.

Group of orthologs #404. Best score 383 bits
Score difference with first non-orthologous sequence - A.capsulata:383 P.pallidum:383

C0NJ57              	100.00%		D3BJN3              	100.00%
Bootstrap support for C0NJ57 as seed ortholog is 100%.
Bootstrap support for D3BJN3 as seed ortholog is 100%.

Group of orthologs #405. Best score 381 bits
Score difference with first non-orthologous sequence - A.capsulata:22 P.pallidum:62

C0NAU3              	100.00%		D3BMU7              	100.00%
C0NBV1              	100.00%		
Bootstrap support for C0NAU3 as seed ortholog is 75%.
Bootstrap support for C0NBV1 as seed ortholog is 75%.
Bootstrap support for D3BMU7 as seed ortholog is 98%.

Group of orthologs #406. Best score 381 bits
Score difference with first non-orthologous sequence - A.capsulata:381 P.pallidum:381

C0NRY6              	100.00%		D3B568              	100.00%
Bootstrap support for C0NRY6 as seed ortholog is 100%.
Bootstrap support for D3B568 as seed ortholog is 100%.

Group of orthologs #407. Best score 381 bits
Score difference with first non-orthologous sequence - A.capsulata:381 P.pallidum:381

C0P017              	100.00%		D3BCF9              	100.00%
Bootstrap support for C0P017 as seed ortholog is 100%.
Bootstrap support for D3BCF9 as seed ortholog is 100%.

Group of orthologs #408. Best score 381 bits
Score difference with first non-orthologous sequence - A.capsulata:381 P.pallidum:381

C0NTG5              	100.00%		D3BJC7              	100.00%
Bootstrap support for C0NTG5 as seed ortholog is 100%.
Bootstrap support for D3BJC7 as seed ortholog is 100%.

Group of orthologs #409. Best score 381 bits
Score difference with first non-orthologous sequence - A.capsulata:381 P.pallidum:381

C0NNN6              	100.00%		D3BUK1              	100.00%
Bootstrap support for C0NNN6 as seed ortholog is 100%.
Bootstrap support for D3BUK1 as seed ortholog is 100%.

Group of orthologs #410. Best score 380 bits
Score difference with first non-orthologous sequence - A.capsulata:380 P.pallidum:175

C0NVD2              	100.00%		D3BJF3              	100.00%
C0NAW9              	12.89%		
Bootstrap support for C0NVD2 as seed ortholog is 100%.
Bootstrap support for D3BJF3 as seed ortholog is 100%.

Group of orthologs #411. Best score 380 bits
Score difference with first non-orthologous sequence - A.capsulata:380 P.pallidum:380

C0NR48              	100.00%		D3BSM1              	100.00%
Bootstrap support for C0NR48 as seed ortholog is 100%.
Bootstrap support for D3BSM1 as seed ortholog is 100%.

Group of orthologs #412. Best score 379 bits
Score difference with first non-orthologous sequence - A.capsulata:379 P.pallidum:155

C0NJH1              	100.00%		D3AY64              	100.00%
Bootstrap support for C0NJH1 as seed ortholog is 100%.
Bootstrap support for D3AY64 as seed ortholog is 99%.

Group of orthologs #413. Best score 379 bits
Score difference with first non-orthologous sequence - A.capsulata:379 P.pallidum:379

C0NCP0              	100.00%		D3BVL5              	100.00%
Bootstrap support for C0NCP0 as seed ortholog is 100%.
Bootstrap support for D3BVL5 as seed ortholog is 100%.

Group of orthologs #414. Best score 378 bits
Score difference with first non-orthologous sequence - A.capsulata:317 P.pallidum:321

C0NCJ1              	100.00%		D3AXN9              	100.00%
Bootstrap support for C0NCJ1 as seed ortholog is 100%.
Bootstrap support for D3AXN9 as seed ortholog is 100%.

Group of orthologs #415. Best score 378 bits
Score difference with first non-orthologous sequence - A.capsulata:306 P.pallidum:67

C0NMW5              	100.00%		D3B6F1              	100.00%
Bootstrap support for C0NMW5 as seed ortholog is 100%.
Bootstrap support for D3B6F1 as seed ortholog is 93%.

Group of orthologs #416. Best score 377 bits
Score difference with first non-orthologous sequence - A.capsulata:377 P.pallidum:377

C0NER3              	100.00%		D3BU83              	100.00%
Bootstrap support for C0NER3 as seed ortholog is 100%.
Bootstrap support for D3BU83 as seed ortholog is 100%.

Group of orthologs #417. Best score 376 bits
Score difference with first non-orthologous sequence - A.capsulata:70 P.pallidum:215

C0P0B7              	100.00%		D3B2D6              	100.00%
                    	       		D3AZ71              	8.54%
Bootstrap support for C0P0B7 as seed ortholog is 89%.
Bootstrap support for D3B2D6 as seed ortholog is 99%.

Group of orthologs #418. Best score 375 bits
Score difference with first non-orthologous sequence - A.capsulata:375 P.pallidum:375

C0NXW1              	100.00%		D3BGY5              	100.00%
                    	       		D3B237              	27.30%
                    	       		D3AYH0              	13.78%
Bootstrap support for C0NXW1 as seed ortholog is 100%.
Bootstrap support for D3BGY5 as seed ortholog is 100%.

Group of orthologs #419. Best score 375 bits
Score difference with first non-orthologous sequence - A.capsulata:375 P.pallidum:142

C0NXN7              	100.00%		D3AZS9              	100.00%
Bootstrap support for C0NXN7 as seed ortholog is 100%.
Bootstrap support for D3AZS9 as seed ortholog is 99%.

Group of orthologs #420. Best score 375 bits
Score difference with first non-orthologous sequence - A.capsulata:302 P.pallidum:178

C0NR28              	100.00%		D3BVN2              	100.00%
Bootstrap support for C0NR28 as seed ortholog is 100%.
Bootstrap support for D3BVN2 as seed ortholog is 99%.

Group of orthologs #421. Best score 374 bits
Score difference with first non-orthologous sequence - A.capsulata:374 P.pallidum:374

C0NWB8              	100.00%		D3BMH9              	100.00%
Bootstrap support for C0NWB8 as seed ortholog is 100%.
Bootstrap support for D3BMH9 as seed ortholog is 100%.

Group of orthologs #422. Best score 373 bits
Score difference with first non-orthologous sequence - A.capsulata:373 P.pallidum:225

C0NA43              	100.00%		D3B110              	100.00%
Bootstrap support for C0NA43 as seed ortholog is 100%.
Bootstrap support for D3B110 as seed ortholog is 100%.

Group of orthologs #423. Best score 373 bits
Score difference with first non-orthologous sequence - A.capsulata:373 P.pallidum:373

C0NC88              	100.00%		D3B8H0              	100.00%
Bootstrap support for C0NC88 as seed ortholog is 100%.
Bootstrap support for D3B8H0 as seed ortholog is 100%.

Group of orthologs #424. Best score 372 bits
Score difference with first non-orthologous sequence - A.capsulata:53 P.pallidum:141

C0NJW7              	100.00%		D3BPS6              	100.00%
C0NLB5              	8.41%		
Bootstrap support for C0NJW7 as seed ortholog is 90%.
Bootstrap support for D3BPS6 as seed ortholog is 99%.

Group of orthologs #425. Best score 372 bits
Score difference with first non-orthologous sequence - A.capsulata:372 P.pallidum:372

C0NEA1              	100.00%		D3AYC8              	100.00%
Bootstrap support for C0NEA1 as seed ortholog is 100%.
Bootstrap support for D3AYC8 as seed ortholog is 100%.

Group of orthologs #426. Best score 371 bits
Score difference with first non-orthologous sequence - A.capsulata:1 P.pallidum:200

C0NAK8              	100.00%		D3B3W0              	100.00%
Bootstrap support for C0NAK8 as seed ortholog is 49%.
Alternative seed ortholog is C0NEZ5 (1 bits away from this cluster)
Bootstrap support for D3B3W0 as seed ortholog is 100%.

Group of orthologs #427. Best score 371 bits
Score difference with first non-orthologous sequence - A.capsulata:371 P.pallidum:371

C0NUL9              	100.00%		D3BB01              	100.00%
Bootstrap support for C0NUL9 as seed ortholog is 100%.
Bootstrap support for D3BB01 as seed ortholog is 100%.

Group of orthologs #428. Best score 370 bits
Score difference with first non-orthologous sequence - A.capsulata:370 P.pallidum:370

C0NEZ8              	100.00%		D3BKG1              	100.00%
Bootstrap support for C0NEZ8 as seed ortholog is 100%.
Bootstrap support for D3BKG1 as seed ortholog is 100%.

Group of orthologs #429. Best score 369 bits
Score difference with first non-orthologous sequence - A.capsulata:369 P.pallidum:369

C0NBF2              	100.00%		D3B2H8              	100.00%
Bootstrap support for C0NBF2 as seed ortholog is 100%.
Bootstrap support for D3B2H8 as seed ortholog is 100%.

Group of orthologs #430. Best score 369 bits
Score difference with first non-orthologous sequence - A.capsulata:132 P.pallidum:79

C0NJN4              	100.00%		D3B1I2              	100.00%
Bootstrap support for C0NJN4 as seed ortholog is 99%.
Bootstrap support for D3B1I2 as seed ortholog is 99%.

Group of orthologs #431. Best score 369 bits
Score difference with first non-orthologous sequence - A.capsulata:369 P.pallidum:369

C0NEV9              	100.00%		D3B7T8              	100.00%
Bootstrap support for C0NEV9 as seed ortholog is 100%.
Bootstrap support for D3B7T8 as seed ortholog is 100%.

Group of orthologs #432. Best score 368 bits
Score difference with first non-orthologous sequence - A.capsulata:368 P.pallidum:368

C0NGU1              	100.00%		D3BLP5              	100.00%
Bootstrap support for C0NGU1 as seed ortholog is 100%.
Bootstrap support for D3BLP5 as seed ortholog is 100%.

Group of orthologs #433. Best score 367 bits
Score difference with first non-orthologous sequence - A.capsulata:367 P.pallidum:367

C0NTH0              	100.00%		D3AY53              	100.00%
Bootstrap support for C0NTH0 as seed ortholog is 100%.
Bootstrap support for D3AY53 as seed ortholog is 100%.

Group of orthologs #434. Best score 366 bits
Score difference with first non-orthologous sequence - A.capsulata:307 P.pallidum:272

C0NF53              	100.00%		D3BBG6              	100.00%
Bootstrap support for C0NF53 as seed ortholog is 100%.
Bootstrap support for D3BBG6 as seed ortholog is 100%.

Group of orthologs #435. Best score 365 bits
Score difference with first non-orthologous sequence - A.capsulata:365 P.pallidum:315

C0NJL9              	100.00%		D3B0D6              	100.00%
Bootstrap support for C0NJL9 as seed ortholog is 100%.
Bootstrap support for D3B0D6 as seed ortholog is 100%.

Group of orthologs #436. Best score 365 bits
Score difference with first non-orthologous sequence - A.capsulata:365 P.pallidum:365

C0NM54              	100.00%		D3BM07              	100.00%
Bootstrap support for C0NM54 as seed ortholog is 100%.
Bootstrap support for D3BM07 as seed ortholog is 100%.

Group of orthologs #437. Best score 364 bits
Score difference with first non-orthologous sequence - A.capsulata:317 P.pallidum:364

C0NG67              	100.00%		D3AX55              	100.00%
Bootstrap support for C0NG67 as seed ortholog is 100%.
Bootstrap support for D3AX55 as seed ortholog is 100%.

Group of orthologs #438. Best score 364 bits
Score difference with first non-orthologous sequence - A.capsulata:364 P.pallidum:134

C0NMS4              	100.00%		D3BV78              	100.00%
Bootstrap support for C0NMS4 as seed ortholog is 100%.
Bootstrap support for D3BV78 as seed ortholog is 99%.

Group of orthologs #439. Best score 363 bits
Score difference with first non-orthologous sequence - A.capsulata:363 P.pallidum:363

C0NFU1              	100.00%		D3BDY0              	100.00%
Bootstrap support for C0NFU1 as seed ortholog is 100%.
Bootstrap support for D3BDY0 as seed ortholog is 100%.

Group of orthologs #440. Best score 363 bits
Score difference with first non-orthologous sequence - A.capsulata:238 P.pallidum:246

C0NU41              	100.00%		D3B695              	100.00%
Bootstrap support for C0NU41 as seed ortholog is 100%.
Bootstrap support for D3B695 as seed ortholog is 100%.

Group of orthologs #441. Best score 362 bits
Score difference with first non-orthologous sequence - A.capsulata:362 P.pallidum:362

C0NWL5              	100.00%		D3B6R8              	100.00%
Bootstrap support for C0NWL5 as seed ortholog is 100%.
Bootstrap support for D3B6R8 as seed ortholog is 100%.

Group of orthologs #442. Best score 362 bits
Score difference with first non-orthologous sequence - A.capsulata:239 P.pallidum:362

C0NIH3              	100.00%		D3BSA4              	100.00%
Bootstrap support for C0NIH3 as seed ortholog is 100%.
Bootstrap support for D3BSA4 as seed ortholog is 100%.

Group of orthologs #443. Best score 359 bits
Score difference with first non-orthologous sequence - A.capsulata:359 P.pallidum:179

C0NBG1              	100.00%		D3AVX5              	100.00%
C0NAA6              	10.91%		
Bootstrap support for C0NBG1 as seed ortholog is 100%.
Bootstrap support for D3AVX5 as seed ortholog is 100%.

Group of orthologs #444. Best score 359 bits
Score difference with first non-orthologous sequence - A.capsulata:359 P.pallidum:359

C0NCZ8              	100.00%		D3B4Z6              	100.00%
Bootstrap support for C0NCZ8 as seed ortholog is 100%.
Bootstrap support for D3B4Z6 as seed ortholog is 100%.

Group of orthologs #445. Best score 359 bits
Score difference with first non-orthologous sequence - A.capsulata:359 P.pallidum:359

C0NF45              	100.00%		D3B606              	100.00%
Bootstrap support for C0NF45 as seed ortholog is 100%.
Bootstrap support for D3B606 as seed ortholog is 100%.

Group of orthologs #446. Best score 359 bits
Score difference with first non-orthologous sequence - A.capsulata:359 P.pallidum:283

C0NH41              	100.00%		D3BBS3              	100.00%
Bootstrap support for C0NH41 as seed ortholog is 100%.
Bootstrap support for D3BBS3 as seed ortholog is 100%.

Group of orthologs #447. Best score 359 bits
Score difference with first non-orthologous sequence - A.capsulata:359 P.pallidum:359

C0NJN2              	100.00%		D3BCZ2              	100.00%
Bootstrap support for C0NJN2 as seed ortholog is 100%.
Bootstrap support for D3BCZ2 as seed ortholog is 100%.

Group of orthologs #448. Best score 359 bits
Score difference with first non-orthologous sequence - A.capsulata:359 P.pallidum:359

C0NGN8              	100.00%		D3BJC8              	100.00%
Bootstrap support for C0NGN8 as seed ortholog is 100%.
Bootstrap support for D3BJC8 as seed ortholog is 100%.

Group of orthologs #449. Best score 359 bits
Score difference with first non-orthologous sequence - A.capsulata:359 P.pallidum:158

C0NDH3              	100.00%		D3BR06              	100.00%
Bootstrap support for C0NDH3 as seed ortholog is 100%.
Bootstrap support for D3BR06 as seed ortholog is 99%.

Group of orthologs #450. Best score 358 bits
Score difference with first non-orthologous sequence - A.capsulata:358 P.pallidum:51

C0NAA4              	100.00%		D3BBA2              	100.00%
C0NCL4              	5.49%		D3BNB3              	29.67%
                    	       		D3AW28              	6.64%
Bootstrap support for C0NAA4 as seed ortholog is 100%.
Bootstrap support for D3BBA2 as seed ortholog is 76%.

Group of orthologs #451. Best score 358 bits
Score difference with first non-orthologous sequence - A.capsulata:358 P.pallidum:358

C0NI64              	100.00%		D3AZL0              	100.00%
Bootstrap support for C0NI64 as seed ortholog is 100%.
Bootstrap support for D3AZL0 as seed ortholog is 100%.

Group of orthologs #452. Best score 358 bits
Score difference with first non-orthologous sequence - A.capsulata:103 P.pallidum:358

C0NAK7              	100.00%		D3BEF1              	100.00%
Bootstrap support for C0NAK7 as seed ortholog is 98%.
Bootstrap support for D3BEF1 as seed ortholog is 100%.

Group of orthologs #453. Best score 358 bits
Score difference with first non-orthologous sequence - A.capsulata:175 P.pallidum:145

C0NG02              	100.00%		D3BLI8              	100.00%
Bootstrap support for C0NG02 as seed ortholog is 99%.
Bootstrap support for D3BLI8 as seed ortholog is 99%.

Group of orthologs #454. Best score 358 bits
Score difference with first non-orthologous sequence - A.capsulata:358 P.pallidum:264

C0NT98              	100.00%		D3BD64              	100.00%
Bootstrap support for C0NT98 as seed ortholog is 100%.
Bootstrap support for D3BD64 as seed ortholog is 100%.

Group of orthologs #455. Best score 358 bits
Score difference with first non-orthologous sequence - A.capsulata:186 P.pallidum:358

C0NZ02              	100.00%		D3BCH5              	100.00%
Bootstrap support for C0NZ02 as seed ortholog is 100%.
Bootstrap support for D3BCH5 as seed ortholog is 100%.

Group of orthologs #456. Best score 358 bits
Score difference with first non-orthologous sequence - A.capsulata:358 P.pallidum:266

C0NNW5              	100.00%		D3BUD5              	100.00%
Bootstrap support for C0NNW5 as seed ortholog is 100%.
Bootstrap support for D3BUD5 as seed ortholog is 99%.

Group of orthologs #457. Best score 357 bits
Score difference with first non-orthologous sequence - A.capsulata:80 P.pallidum:58

C0NC93              	100.00%		D3BUD0              	100.00%
Bootstrap support for C0NC93 as seed ortholog is 96%.
Bootstrap support for D3BUD0 as seed ortholog is 84%.

Group of orthologs #458. Best score 355 bits
Score difference with first non-orthologous sequence - A.capsulata:355 P.pallidum:355

C0NGA6              	100.00%		D3B0Z1              	100.00%
Bootstrap support for C0NGA6 as seed ortholog is 100%.
Bootstrap support for D3B0Z1 as seed ortholog is 100%.

Group of orthologs #459. Best score 354 bits
Score difference with first non-orthologous sequence - A.capsulata:287 P.pallidum:150

C0NW05              	100.00%		D3BPU6              	100.00%
Bootstrap support for C0NW05 as seed ortholog is 100%.
Bootstrap support for D3BPU6 as seed ortholog is 99%.

Group of orthologs #460. Best score 353 bits
Score difference with first non-orthologous sequence - A.capsulata:353 P.pallidum:353

C0NL23              	100.00%		D3AVU8              	100.00%
Bootstrap support for C0NL23 as seed ortholog is 100%.
Bootstrap support for D3AVU8 as seed ortholog is 100%.

Group of orthologs #461. Best score 353 bits
Score difference with first non-orthologous sequence - A.capsulata:353 P.pallidum:353

C0NHZ5              	100.00%		D3AZ62              	100.00%
Bootstrap support for C0NHZ5 as seed ortholog is 100%.
Bootstrap support for D3AZ62 as seed ortholog is 100%.

Group of orthologs #462. Best score 353 bits
Score difference with first non-orthologous sequence - A.capsulata:353 P.pallidum:353

C0NQE2              	100.00%		D3BPU0              	100.00%
Bootstrap support for C0NQE2 as seed ortholog is 100%.
Bootstrap support for D3BPU0 as seed ortholog is 100%.

Group of orthologs #463. Best score 352 bits
Score difference with first non-orthologous sequence - A.capsulata:250 P.pallidum:352

C0NB99              	100.00%		D3AWT2              	100.00%
Bootstrap support for C0NB99 as seed ortholog is 100%.
Bootstrap support for D3AWT2 as seed ortholog is 100%.

Group of orthologs #464. Best score 352 bits
Score difference with first non-orthologous sequence - A.capsulata:352 P.pallidum:352

C0NQU6              	100.00%		D3B3U0              	100.00%
Bootstrap support for C0NQU6 as seed ortholog is 100%.
Bootstrap support for D3B3U0 as seed ortholog is 100%.

Group of orthologs #465. Best score 352 bits
Score difference with first non-orthologous sequence - A.capsulata:352 P.pallidum:352

C0NPH6              	100.00%		D3BJV5              	100.00%
Bootstrap support for C0NPH6 as seed ortholog is 100%.
Bootstrap support for D3BJV5 as seed ortholog is 100%.

Group of orthologs #466. Best score 351 bits
Score difference with first non-orthologous sequence - A.capsulata:207 P.pallidum:351

C0NLB4              	100.00%		D3BGP9              	100.00%
Bootstrap support for C0NLB4 as seed ortholog is 99%.
Bootstrap support for D3BGP9 as seed ortholog is 100%.

Group of orthologs #467. Best score 351 bits
Score difference with first non-orthologous sequence - A.capsulata:351 P.pallidum:351

C0NF54              	100.00%		D3BQJ7              	100.00%
Bootstrap support for C0NF54 as seed ortholog is 100%.
Bootstrap support for D3BQJ7 as seed ortholog is 100%.

Group of orthologs #468. Best score 351 bits
Score difference with first non-orthologous sequence - A.capsulata:351 P.pallidum:351

C0NN44              	100.00%		D3BQ30              	100.00%
Bootstrap support for C0NN44 as seed ortholog is 100%.
Bootstrap support for D3BQ30 as seed ortholog is 100%.

Group of orthologs #469. Best score 349 bits
Score difference with first non-orthologous sequence - A.capsulata:349 P.pallidum:302

C0NB30              	100.00%		D3B1Q0              	100.00%
Bootstrap support for C0NB30 as seed ortholog is 100%.
Bootstrap support for D3B1Q0 as seed ortholog is 100%.

Group of orthologs #470. Best score 349 bits
Score difference with first non-orthologous sequence - A.capsulata:349 P.pallidum:349

C0NFU6              	100.00%		D3B4I5              	100.00%
Bootstrap support for C0NFU6 as seed ortholog is 100%.
Bootstrap support for D3B4I5 as seed ortholog is 100%.

Group of orthologs #471. Best score 349 bits
Score difference with first non-orthologous sequence - A.capsulata:11 P.pallidum:56

C0NH76              	100.00%		D3BBN0              	100.00%
Bootstrap support for C0NH76 as seed ortholog is 35%.
Alternative seed ortholog is C0NML9 (11 bits away from this cluster)
Bootstrap support for D3BBN0 as seed ortholog is 94%.

Group of orthologs #472. Best score 349 bits
Score difference with first non-orthologous sequence - A.capsulata:349 P.pallidum:349

C0NI03              	100.00%		D3BHT0              	100.00%
Bootstrap support for C0NI03 as seed ortholog is 100%.
Bootstrap support for D3BHT0 as seed ortholog is 100%.

Group of orthologs #473. Best score 347 bits
Score difference with first non-orthologous sequence - A.capsulata:5 P.pallidum:248

C0NFH7              	100.00%		D3BEA1              	100.00%
Bootstrap support for C0NFH7 as seed ortholog is 46%.
Alternative seed ortholog is C0NHE5 (5 bits away from this cluster)
Bootstrap support for D3BEA1 as seed ortholog is 99%.

Group of orthologs #474. Best score 347 bits
Score difference with first non-orthologous sequence - A.capsulata:102 P.pallidum:143

C0NV42              	100.00%		D3B626              	100.00%
Bootstrap support for C0NV42 as seed ortholog is 99%.
Bootstrap support for D3B626 as seed ortholog is 100%.

Group of orthologs #475. Best score 347 bits
Score difference with first non-orthologous sequence - A.capsulata:347 P.pallidum:347

C0NQ24              	100.00%		D3BBU3              	100.00%
Bootstrap support for C0NQ24 as seed ortholog is 100%.
Bootstrap support for D3BBU3 as seed ortholog is 100%.

Group of orthologs #476. Best score 347 bits
Score difference with first non-orthologous sequence - A.capsulata:347 P.pallidum:347

C0NQE8              	100.00%		D3BQG1              	100.00%
Bootstrap support for C0NQE8 as seed ortholog is 100%.
Bootstrap support for D3BQG1 as seed ortholog is 100%.

Group of orthologs #477. Best score 346 bits
Score difference with first non-orthologous sequence - A.capsulata:122 P.pallidum:166

C0NWZ0              	100.00%		D3BCX1              	100.00%
                    	       		D3BJJ1              	12.13%
Bootstrap support for C0NWZ0 as seed ortholog is 99%.
Bootstrap support for D3BCX1 as seed ortholog is 100%.

Group of orthologs #478. Best score 346 bits
Score difference with first non-orthologous sequence - A.capsulata:346 P.pallidum:346

C0NJ27              	100.00%		D3BVL2              	100.00%
Bootstrap support for C0NJ27 as seed ortholog is 100%.
Bootstrap support for D3BVL2 as seed ortholog is 100%.

Group of orthologs #479. Best score 345 bits
Score difference with first non-orthologous sequence - A.capsulata:274 P.pallidum:345

C0NR03              	100.00%		D3BFD7              	100.00%
Bootstrap support for C0NR03 as seed ortholog is 100%.
Bootstrap support for D3BFD7 as seed ortholog is 100%.

Group of orthologs #480. Best score 345 bits
Score difference with first non-orthologous sequence - A.capsulata:345 P.pallidum:345

C0NXA3              	100.00%		D3BBM5              	100.00%
Bootstrap support for C0NXA3 as seed ortholog is 100%.
Bootstrap support for D3BBM5 as seed ortholog is 100%.

Group of orthologs #481. Best score 344 bits
Score difference with first non-orthologous sequence - A.capsulata:344 P.pallidum:344

C0NM47              	100.00%		D3BM73              	100.00%
Bootstrap support for C0NM47 as seed ortholog is 100%.
Bootstrap support for D3BM73 as seed ortholog is 100%.

Group of orthologs #482. Best score 343 bits
Score difference with first non-orthologous sequence - A.capsulata:343 P.pallidum:343

C0NPR6              	100.00%		D3AWK7              	100.00%
Bootstrap support for C0NPR6 as seed ortholog is 100%.
Bootstrap support for D3AWK7 as seed ortholog is 100%.

Group of orthologs #483. Best score 343 bits
Score difference with first non-orthologous sequence - A.capsulata:343 P.pallidum:343

C0P114              	100.00%		D3B171              	100.00%
Bootstrap support for C0P114 as seed ortholog is 100%.
Bootstrap support for D3B171 as seed ortholog is 100%.

Group of orthologs #484. Best score 343 bits
Score difference with first non-orthologous sequence - A.capsulata:343 P.pallidum:343

C0NJX1              	100.00%		D3BPQ4              	100.00%
Bootstrap support for C0NJX1 as seed ortholog is 100%.
Bootstrap support for D3BPQ4 as seed ortholog is 100%.

Group of orthologs #485. Best score 342 bits
Score difference with first non-orthologous sequence - A.capsulata:342 P.pallidum:342

C0NEX8              	100.00%		D3AXC9              	100.00%
Bootstrap support for C0NEX8 as seed ortholog is 100%.
Bootstrap support for D3AXC9 as seed ortholog is 100%.

Group of orthologs #486. Best score 342 bits
Score difference with first non-orthologous sequence - A.capsulata:342 P.pallidum:166

C0NFQ1              	100.00%		D3B9H0              	100.00%
Bootstrap support for C0NFQ1 as seed ortholog is 100%.
Bootstrap support for D3B9H0 as seed ortholog is 99%.

Group of orthologs #487. Best score 342 bits
Score difference with first non-orthologous sequence - A.capsulata:231 P.pallidum:157

C0NPN5              	100.00%		D3B528              	100.00%
Bootstrap support for C0NPN5 as seed ortholog is 100%.
Bootstrap support for D3B528 as seed ortholog is 99%.

Group of orthologs #488. Best score 342 bits
Score difference with first non-orthologous sequence - A.capsulata:342 P.pallidum:342

C0NV23              	100.00%		D3B3Z0              	100.00%
Bootstrap support for C0NV23 as seed ortholog is 100%.
Bootstrap support for D3B3Z0 as seed ortholog is 100%.

Group of orthologs #489. Best score 342 bits
Score difference with first non-orthologous sequence - A.capsulata:174 P.pallidum:95

C0NW15              	100.00%		D3B9P6              	100.00%
Bootstrap support for C0NW15 as seed ortholog is 99%.
Bootstrap support for D3B9P6 as seed ortholog is 97%.

Group of orthologs #490. Best score 342 bits
Score difference with first non-orthologous sequence - A.capsulata:342 P.pallidum:342

C0NNF3              	100.00%		D3BNF4              	100.00%
Bootstrap support for C0NNF3 as seed ortholog is 100%.
Bootstrap support for D3BNF4 as seed ortholog is 100%.

Group of orthologs #491. Best score 341 bits
Score difference with first non-orthologous sequence - A.capsulata:341 P.pallidum:341

C0NXS3              	100.00%		D3BBL0              	100.00%
Bootstrap support for C0NXS3 as seed ortholog is 100%.
Bootstrap support for D3BBL0 as seed ortholog is 100%.

Group of orthologs #492. Best score 341 bits
Score difference with first non-orthologous sequence - A.capsulata:136 P.pallidum:202

C0NQH7              	100.00%		D3BKN4              	100.00%
Bootstrap support for C0NQH7 as seed ortholog is 99%.
Bootstrap support for D3BKN4 as seed ortholog is 100%.

Group of orthologs #493. Best score 340 bits
Score difference with first non-orthologous sequence - A.capsulata:340 P.pallidum:340

C0NU05              	100.00%		D3BL58              	100.00%
                    	       		D3BL57              	42.00%
Bootstrap support for C0NU05 as seed ortholog is 100%.
Bootstrap support for D3BL58 as seed ortholog is 100%.

Group of orthologs #494. Best score 340 bits
Score difference with first non-orthologous sequence - A.capsulata:226 P.pallidum:217

C0P0W0              	100.00%		D3BQM9              	100.00%
C0P0P3              	7.39%		
Bootstrap support for C0P0W0 as seed ortholog is 99%.
Bootstrap support for D3BQM9 as seed ortholog is 100%.

Group of orthologs #495. Best score 340 bits
Score difference with first non-orthologous sequence - A.capsulata:340 P.pallidum:340

C0NFT9              	100.00%		D3B0I3              	100.00%
Bootstrap support for C0NFT9 as seed ortholog is 100%.
Bootstrap support for D3B0I3 as seed ortholog is 100%.

Group of orthologs #496. Best score 340 bits
Score difference with first non-orthologous sequence - A.capsulata:340 P.pallidum:64

C0NKE4              	100.00%		D3B3H4              	100.00%
Bootstrap support for C0NKE4 as seed ortholog is 100%.
Bootstrap support for D3B3H4 as seed ortholog is 88%.

Group of orthologs #497. Best score 339 bits
Score difference with first non-orthologous sequence - A.capsulata:339 P.pallidum:282

C0NP68              	100.00%		D3BCT5              	100.00%
                    	       		D3BE81              	37.34%
Bootstrap support for C0NP68 as seed ortholog is 100%.
Bootstrap support for D3BCT5 as seed ortholog is 100%.

Group of orthologs #498. Best score 339 bits
Score difference with first non-orthologous sequence - A.capsulata:106 P.pallidum:280

C0NWU3              	100.00%		D3BND6              	100.00%
Bootstrap support for C0NWU3 as seed ortholog is 98%.
Bootstrap support for D3BND6 as seed ortholog is 100%.

Group of orthologs #499. Best score 339 bits
Score difference with first non-orthologous sequence - A.capsulata:339 P.pallidum:339

C0NXU1              	100.00%		D3BN56              	100.00%
Bootstrap support for C0NXU1 as seed ortholog is 100%.
Bootstrap support for D3BN56 as seed ortholog is 100%.

Group of orthologs #500. Best score 338 bits
Score difference with first non-orthologous sequence - A.capsulata:338 P.pallidum:338

C0NCW0              	100.00%		D3BCN3              	100.00%
Bootstrap support for C0NCW0 as seed ortholog is 100%.
Bootstrap support for D3BCN3 as seed ortholog is 100%.

Group of orthologs #501. Best score 336 bits
Score difference with first non-orthologous sequence - A.capsulata:336 P.pallidum:121

C0NK09              	100.00%		D3B485              	100.00%
Bootstrap support for C0NK09 as seed ortholog is 100%.
Bootstrap support for D3B485 as seed ortholog is 100%.

Group of orthologs #502. Best score 336 bits
Score difference with first non-orthologous sequence - A.capsulata:336 P.pallidum:336

C0NXQ4              	100.00%		D3AYA8              	100.00%
Bootstrap support for C0NXQ4 as seed ortholog is 100%.
Bootstrap support for D3AYA8 as seed ortholog is 100%.

Group of orthologs #503. Best score 335 bits
Score difference with first non-orthologous sequence - A.capsulata:335 P.pallidum:335

C0NPP2              	100.00%		D3B8I4              	100.00%
Bootstrap support for C0NPP2 as seed ortholog is 100%.
Bootstrap support for D3B8I4 as seed ortholog is 100%.

Group of orthologs #504. Best score 334 bits
Score difference with first non-orthologous sequence - A.capsulata:334 P.pallidum:105

C0NA44              	100.00%		D3B210              	100.00%
Bootstrap support for C0NA44 as seed ortholog is 100%.
Bootstrap support for D3B210 as seed ortholog is 97%.

Group of orthologs #505. Best score 334 bits
Score difference with first non-orthologous sequence - A.capsulata:334 P.pallidum:334

C0NS33              	100.00%		D3B6P0              	100.00%
Bootstrap support for C0NS33 as seed ortholog is 100%.
Bootstrap support for D3B6P0 as seed ortholog is 100%.

Group of orthologs #506. Best score 334 bits
Score difference with first non-orthologous sequence - A.capsulata:334 P.pallidum:334

C0NP39              	100.00%		D3BDL8              	100.00%
Bootstrap support for C0NP39 as seed ortholog is 100%.
Bootstrap support for D3BDL8 as seed ortholog is 100%.

Group of orthologs #507. Best score 333 bits
Score difference with first non-orthologous sequence - A.capsulata:333 P.pallidum:333

C0NFY8              	100.00%		D3AZM5              	100.00%
Bootstrap support for C0NFY8 as seed ortholog is 100%.
Bootstrap support for D3AZM5 as seed ortholog is 100%.

Group of orthologs #508. Best score 333 bits
Score difference with first non-orthologous sequence - A.capsulata:180 P.pallidum:333

C0NF78              	100.00%		D3B5L4              	100.00%
Bootstrap support for C0NF78 as seed ortholog is 99%.
Bootstrap support for D3B5L4 as seed ortholog is 100%.

Group of orthologs #509. Best score 333 bits
Score difference with first non-orthologous sequence - A.capsulata:333 P.pallidum:333

C0NUK3              	100.00%		D3BQ08              	100.00%
Bootstrap support for C0NUK3 as seed ortholog is 100%.
Bootstrap support for D3BQ08 as seed ortholog is 100%.

Group of orthologs #510. Best score 332 bits
Score difference with first non-orthologous sequence - A.capsulata:332 P.pallidum:332

C0NEQ5              	100.00%		D3B3A9              	100.00%
Bootstrap support for C0NEQ5 as seed ortholog is 100%.
Bootstrap support for D3B3A9 as seed ortholog is 100%.

Group of orthologs #511. Best score 332 bits
Score difference with first non-orthologous sequence - A.capsulata:332 P.pallidum:332

C0P0F2              	100.00%		D3BIF4              	100.00%
Bootstrap support for C0P0F2 as seed ortholog is 100%.
Bootstrap support for D3BIF4 as seed ortholog is 100%.

Group of orthologs #512. Best score 331 bits
Score difference with first non-orthologous sequence - A.capsulata:245 P.pallidum:331

C0P178              	100.00%		D3B0Z8              	100.00%
Bootstrap support for C0P178 as seed ortholog is 100%.
Bootstrap support for D3B0Z8 as seed ortholog is 100%.

Group of orthologs #513. Best score 331 bits
Score difference with first non-orthologous sequence - A.capsulata:64 P.pallidum:197

C0NE30              	100.00%		D3BSW5              	100.00%
Bootstrap support for C0NE30 as seed ortholog is 91%.
Bootstrap support for D3BSW5 as seed ortholog is 100%.

Group of orthologs #514. Best score 330 bits
Score difference with first non-orthologous sequence - A.capsulata:330 P.pallidum:172

C0NH52              	100.00%		D3AZ84              	100.00%
Bootstrap support for C0NH52 as seed ortholog is 100%.
Bootstrap support for D3AZ84 as seed ortholog is 99%.

Group of orthologs #515. Best score 329 bits
Score difference with first non-orthologous sequence - A.capsulata:329 P.pallidum:329

C0NCN3              	100.00%		D3B501              	100.00%
Bootstrap support for C0NCN3 as seed ortholog is 100%.
Bootstrap support for D3B501 as seed ortholog is 100%.

Group of orthologs #516. Best score 329 bits
Score difference with first non-orthologous sequence - A.capsulata:329 P.pallidum:263

C0NUJ2              	100.00%		D3B1Q6              	100.00%
Bootstrap support for C0NUJ2 as seed ortholog is 100%.
Bootstrap support for D3B1Q6 as seed ortholog is 100%.

Group of orthologs #517. Best score 329 bits
Score difference with first non-orthologous sequence - A.capsulata:329 P.pallidum:329

C0P110              	100.00%		D3BUZ4              	100.00%
Bootstrap support for C0P110 as seed ortholog is 100%.
Bootstrap support for D3BUZ4 as seed ortholog is 100%.

Group of orthologs #518. Best score 328 bits
Score difference with first non-orthologous sequence - A.capsulata:328 P.pallidum:328

C0NE02              	100.00%		D3AXF4              	100.00%
Bootstrap support for C0NE02 as seed ortholog is 100%.
Bootstrap support for D3AXF4 as seed ortholog is 100%.

Group of orthologs #519. Best score 328 bits
Score difference with first non-orthologous sequence - A.capsulata:253 P.pallidum:328

C0NH34              	100.00%		D3BJZ6              	100.00%
Bootstrap support for C0NH34 as seed ortholog is 100%.
Bootstrap support for D3BJZ6 as seed ortholog is 100%.

Group of orthologs #520. Best score 328 bits
Score difference with first non-orthologous sequence - A.capsulata:328 P.pallidum:203

C0NJM2              	100.00%		D3BM03              	100.00%
Bootstrap support for C0NJM2 as seed ortholog is 100%.
Bootstrap support for D3BM03 as seed ortholog is 100%.

Group of orthologs #521. Best score 327 bits
Score difference with first non-orthologous sequence - A.capsulata:327 P.pallidum:327

C0NA40              	100.00%		D3B1J5              	100.00%
Bootstrap support for C0NA40 as seed ortholog is 100%.
Bootstrap support for D3B1J5 as seed ortholog is 100%.

Group of orthologs #522. Best score 327 bits
Score difference with first non-orthologous sequence - A.capsulata:327 P.pallidum:327

C0NJX7              	100.00%		D3B6S6              	100.00%
Bootstrap support for C0NJX7 as seed ortholog is 100%.
Bootstrap support for D3B6S6 as seed ortholog is 100%.

Group of orthologs #523. Best score 326 bits
Score difference with first non-orthologous sequence - A.capsulata:149 P.pallidum:326

C0NYT3              	100.00%		D3B2A7              	100.00%
                    	       		D3B205              	46.37%
Bootstrap support for C0NYT3 as seed ortholog is 99%.
Bootstrap support for D3B2A7 as seed ortholog is 100%.

Group of orthologs #524. Best score 326 bits
Score difference with first non-orthologous sequence - A.capsulata:326 P.pallidum:326

C0NZE4              	100.00%		D3B668              	100.00%
Bootstrap support for C0NZE4 as seed ortholog is 100%.
Bootstrap support for D3B668 as seed ortholog is 100%.

Group of orthologs #525. Best score 326 bits
Score difference with first non-orthologous sequence - A.capsulata:326 P.pallidum:326

C0NLY4              	100.00%		D3BKN6              	100.00%
Bootstrap support for C0NLY4 as seed ortholog is 100%.
Bootstrap support for D3BKN6 as seed ortholog is 100%.

Group of orthologs #526. Best score 326 bits
Score difference with first non-orthologous sequence - A.capsulata:326 P.pallidum:326

C0NP72              	100.00%		D3BKM5              	100.00%
Bootstrap support for C0NP72 as seed ortholog is 100%.
Bootstrap support for D3BKM5 as seed ortholog is 100%.

Group of orthologs #527. Best score 324 bits
Score difference with first non-orthologous sequence - A.capsulata:3 P.pallidum:324

C0NVY2              	100.00%		D3BS34              	100.00%
Bootstrap support for C0NVY2 as seed ortholog is 51%.
Alternative seed ortholog is C0NLH4 (3 bits away from this cluster)
Bootstrap support for D3BS34 as seed ortholog is 100%.

Group of orthologs #528. Best score 323 bits
Score difference with first non-orthologous sequence - A.capsulata:323 P.pallidum:323

C0NGE1              	100.00%		D3B7N8              	100.00%
Bootstrap support for C0NGE1 as seed ortholog is 100%.
Bootstrap support for D3B7N8 as seed ortholog is 100%.

Group of orthologs #529. Best score 322 bits
Score difference with first non-orthologous sequence - A.capsulata:322 P.pallidum:322

C0NJP2              	100.00%		D3B3M9              	100.00%
Bootstrap support for C0NJP2 as seed ortholog is 100%.
Bootstrap support for D3B3M9 as seed ortholog is 100%.

Group of orthologs #530. Best score 322 bits
Score difference with first non-orthologous sequence - A.capsulata:322 P.pallidum:322

C0NHS0              	100.00%		D3BM59              	100.00%
Bootstrap support for C0NHS0 as seed ortholog is 100%.
Bootstrap support for D3BM59 as seed ortholog is 100%.

Group of orthologs #531. Best score 321 bits
Score difference with first non-orthologous sequence - A.capsulata:321 P.pallidum:321

C0NLB3              	100.00%		D3BBN6              	100.00%
Bootstrap support for C0NLB3 as seed ortholog is 100%.
Bootstrap support for D3BBN6 as seed ortholog is 100%.

Group of orthologs #532. Best score 321 bits
Score difference with first non-orthologous sequence - A.capsulata:321 P.pallidum:321

C0NZN7              	100.00%		D3BBH0              	100.00%
Bootstrap support for C0NZN7 as seed ortholog is 100%.
Bootstrap support for D3BBH0 as seed ortholog is 100%.

Group of orthologs #533. Best score 320 bits
Score difference with first non-orthologous sequence - A.capsulata:256 P.pallidum:320

C0NXS8              	100.00%		D3BIK1              	100.00%
Bootstrap support for C0NXS8 as seed ortholog is 100%.
Bootstrap support for D3BIK1 as seed ortholog is 100%.

Group of orthologs #534. Best score 319 bits
Score difference with first non-orthologous sequence - A.capsulata:319 P.pallidum:55

C0NAE2              	100.00%		D3B892              	100.00%
Bootstrap support for C0NAE2 as seed ortholog is 100%.
Bootstrap support for D3B892 as seed ortholog is 86%.

Group of orthologs #535. Best score 319 bits
Score difference with first non-orthologous sequence - A.capsulata:59 P.pallidum:40

C0NQ52              	100.00%		D3BKF3              	100.00%
Bootstrap support for C0NQ52 as seed ortholog is 99%.
Bootstrap support for D3BKF3 as seed ortholog is 96%.

Group of orthologs #536. Best score 318 bits
Score difference with first non-orthologous sequence - A.capsulata:318 P.pallidum:318

C0NAL2              	100.00%		D3BHH0              	100.00%
Bootstrap support for C0NAL2 as seed ortholog is 100%.
Bootstrap support for D3BHH0 as seed ortholog is 100%.

Group of orthologs #537. Best score 317 bits
Score difference with first non-orthologous sequence - A.capsulata:317 P.pallidum:317

C0NAP1              	100.00%		D3B3Z7              	100.00%
Bootstrap support for C0NAP1 as seed ortholog is 100%.
Bootstrap support for D3B3Z7 as seed ortholog is 100%.

Group of orthologs #538. Best score 317 bits
Score difference with first non-orthologous sequence - A.capsulata:233 P.pallidum:261

C0NIG5              	100.00%		D3AZ74              	100.00%
Bootstrap support for C0NIG5 as seed ortholog is 100%.
Bootstrap support for D3AZ74 as seed ortholog is 100%.

Group of orthologs #539. Best score 317 bits
Score difference with first non-orthologous sequence - A.capsulata:317 P.pallidum:317

C0NF41              	100.00%		D3B3B2              	100.00%
Bootstrap support for C0NF41 as seed ortholog is 100%.
Bootstrap support for D3B3B2 as seed ortholog is 100%.

Group of orthologs #540. Best score 317 bits
Score difference with first non-orthologous sequence - A.capsulata:317 P.pallidum:111

C0NDJ5              	100.00%		D3BCL7              	100.00%
Bootstrap support for C0NDJ5 as seed ortholog is 100%.
Bootstrap support for D3BCL7 as seed ortholog is 97%.

Group of orthologs #541. Best score 317 bits
Score difference with first non-orthologous sequence - A.capsulata:317 P.pallidum:317

C0NHZ2              	100.00%		D3BII4              	100.00%
Bootstrap support for C0NHZ2 as seed ortholog is 100%.
Bootstrap support for D3BII4 as seed ortholog is 100%.

Group of orthologs #542. Best score 317 bits
Score difference with first non-orthologous sequence - A.capsulata:317 P.pallidum:317

C0NZU8              	100.00%		D3BRX2              	100.00%
Bootstrap support for C0NZU8 as seed ortholog is 100%.
Bootstrap support for D3BRX2 as seed ortholog is 100%.

Group of orthologs #543. Best score 316 bits
Score difference with first non-orthologous sequence - A.capsulata:316 P.pallidum:207

C0NI55              	100.00%		D3BH20              	100.00%
C0NJZ8              	29.44%		
Bootstrap support for C0NI55 as seed ortholog is 100%.
Bootstrap support for D3BH20 as seed ortholog is 100%.

Group of orthologs #544. Best score 316 bits
Score difference with first non-orthologous sequence - A.capsulata:316 P.pallidum:198

C0NCH9              	100.00%		D3BPL3              	100.00%
                    	       		D3BP03              	45.95%
Bootstrap support for C0NCH9 as seed ortholog is 100%.
Bootstrap support for D3BPL3 as seed ortholog is 99%.

Group of orthologs #545. Best score 316 bits
Score difference with first non-orthologous sequence - A.capsulata:235 P.pallidum:316

C0NEF4              	100.00%		D3BDL6              	100.00%
Bootstrap support for C0NEF4 as seed ortholog is 100%.
Bootstrap support for D3BDL6 as seed ortholog is 100%.

Group of orthologs #546. Best score 316 bits
Score difference with first non-orthologous sequence - A.capsulata:316 P.pallidum:316

C0NC78              	100.00%		D3BGC0              	100.00%
Bootstrap support for C0NC78 as seed ortholog is 100%.
Bootstrap support for D3BGC0 as seed ortholog is 100%.

Group of orthologs #547. Best score 316 bits
Score difference with first non-orthologous sequence - A.capsulata:316 P.pallidum:245

C0NCI7              	100.00%		D3BI40              	100.00%
Bootstrap support for C0NCI7 as seed ortholog is 100%.
Bootstrap support for D3BI40 as seed ortholog is 100%.

Group of orthologs #548. Best score 316 bits
Score difference with first non-orthologous sequence - A.capsulata:212 P.pallidum:316

C0NYZ7              	100.00%		D3BAC1              	100.00%
Bootstrap support for C0NYZ7 as seed ortholog is 100%.
Bootstrap support for D3BAC1 as seed ortholog is 100%.

Group of orthologs #549. Best score 315 bits
Score difference with first non-orthologous sequence - A.capsulata:315 P.pallidum:45

C0NXM2              	100.00%		D3BC23              	100.00%
                    	       		D3B1K0              	22.86%
                    	       		D3B8P3              	14.43%
Bootstrap support for C0NXM2 as seed ortholog is 100%.
Bootstrap support for D3BC23 as seed ortholog is 84%.

Group of orthologs #550. Best score 315 bits
Score difference with first non-orthologous sequence - A.capsulata:315 P.pallidum:223

C0NBZ5              	100.00%		D3BRV0              	100.00%
Bootstrap support for C0NBZ5 as seed ortholog is 100%.
Bootstrap support for D3BRV0 as seed ortholog is 99%.

Group of orthologs #551. Best score 314 bits
Score difference with first non-orthologous sequence - A.capsulata:220 P.pallidum:219

C0NMK9              	100.00%		D3B0D7              	100.00%
Bootstrap support for C0NMK9 as seed ortholog is 100%.
Bootstrap support for D3B0D7 as seed ortholog is 100%.

Group of orthologs #552. Best score 314 bits
Score difference with first non-orthologous sequence - A.capsulata:314 P.pallidum:222

C0NAD4              	100.00%		D3BGA4              	100.00%
Bootstrap support for C0NAD4 as seed ortholog is 100%.
Bootstrap support for D3BGA4 as seed ortholog is 99%.

Group of orthologs #553. Best score 314 bits
Score difference with first non-orthologous sequence - A.capsulata:314 P.pallidum:314

C0ND48              	100.00%		D3BP76              	100.00%
Bootstrap support for C0ND48 as seed ortholog is 100%.
Bootstrap support for D3BP76 as seed ortholog is 100%.

Group of orthologs #554. Best score 314 bits
Score difference with first non-orthologous sequence - A.capsulata:314 P.pallidum:314

C0P038              	100.00%		D3B8T4              	100.00%
Bootstrap support for C0P038 as seed ortholog is 100%.
Bootstrap support for D3B8T4 as seed ortholog is 100%.

Group of orthologs #555. Best score 314 bits
Score difference with first non-orthologous sequence - A.capsulata:314 P.pallidum:314

C0NLB7              	100.00%		D3BQ29              	100.00%
Bootstrap support for C0NLB7 as seed ortholog is 100%.
Bootstrap support for D3BQ29 as seed ortholog is 100%.

Group of orthologs #556. Best score 313 bits
Score difference with first non-orthologous sequence - A.capsulata:313 P.pallidum:313

C0NHJ0              	100.00%		D3B6K6              	100.00%
Bootstrap support for C0NHJ0 as seed ortholog is 100%.
Bootstrap support for D3B6K6 as seed ortholog is 100%.

Group of orthologs #557. Best score 313 bits
Score difference with first non-orthologous sequence - A.capsulata:313 P.pallidum:313

C0NVX9              	100.00%		D3B6G8              	100.00%
Bootstrap support for C0NVX9 as seed ortholog is 100%.
Bootstrap support for D3B6G8 as seed ortholog is 100%.

Group of orthologs #558. Best score 312 bits
Score difference with first non-orthologous sequence - A.capsulata:312 P.pallidum:312

C0NL37              	100.00%		D3B2J9              	100.00%
Bootstrap support for C0NL37 as seed ortholog is 100%.
Bootstrap support for D3B2J9 as seed ortholog is 100%.

Group of orthologs #559. Best score 312 bits
Score difference with first non-orthologous sequence - A.capsulata:312 P.pallidum:312

C0NRR7              	100.00%		D3B0B4              	100.00%
Bootstrap support for C0NRR7 as seed ortholog is 100%.
Bootstrap support for D3B0B4 as seed ortholog is 100%.

Group of orthologs #560. Best score 310 bits
Score difference with first non-orthologous sequence - A.capsulata:310 P.pallidum:310

C0NMM3              	100.00%		D3BEZ2              	100.00%
C0NHP7              	22.67%		
Bootstrap support for C0NMM3 as seed ortholog is 100%.
Bootstrap support for D3BEZ2 as seed ortholog is 100%.

Group of orthologs #561. Best score 310 bits
Score difference with first non-orthologous sequence - A.capsulata:93 P.pallidum:152

C0P121              	100.00%		D3AZ82              	100.00%
Bootstrap support for C0P121 as seed ortholog is 97%.
Bootstrap support for D3AZ82 as seed ortholog is 99%.

Group of orthologs #562. Best score 309 bits
Score difference with first non-orthologous sequence - A.capsulata:309 P.pallidum:309

C0NZA3              	100.00%		D3B3Q6              	100.00%
Bootstrap support for C0NZA3 as seed ortholog is 100%.
Bootstrap support for D3B3Q6 as seed ortholog is 100%.

Group of orthologs #563. Best score 309 bits
Score difference with first non-orthologous sequence - A.capsulata:309 P.pallidum:309

C0NDU7              	100.00%		D3BUX7              	100.00%
Bootstrap support for C0NDU7 as seed ortholog is 100%.
Bootstrap support for D3BUX7 as seed ortholog is 100%.

Group of orthologs #564. Best score 309 bits
Score difference with first non-orthologous sequence - A.capsulata:309 P.pallidum:309

C0NWE6              	100.00%		D3BH77              	100.00%
Bootstrap support for C0NWE6 as seed ortholog is 100%.
Bootstrap support for D3BH77 as seed ortholog is 100%.

Group of orthologs #565. Best score 308 bits
Score difference with first non-orthologous sequence - A.capsulata:148 P.pallidum:127

C0NME1              	100.00%		D3B839              	100.00%
Bootstrap support for C0NME1 as seed ortholog is 100%.
Bootstrap support for D3B839 as seed ortholog is 99%.

Group of orthologs #566. Best score 308 bits
Score difference with first non-orthologous sequence - A.capsulata:308 P.pallidum:308

C0NRP3              	100.00%		D3BEA4              	100.00%
Bootstrap support for C0NRP3 as seed ortholog is 100%.
Bootstrap support for D3BEA4 as seed ortholog is 100%.

Group of orthologs #567. Best score 308 bits
Score difference with first non-orthologous sequence - A.capsulata:308 P.pallidum:133

C0P0H0              	100.00%		D3BFI4              	100.00%
Bootstrap support for C0P0H0 as seed ortholog is 100%.
Bootstrap support for D3BFI4 as seed ortholog is 99%.

Group of orthologs #568. Best score 307 bits
Score difference with first non-orthologous sequence - A.capsulata:307 P.pallidum:307

C0NCX6              	100.00%		D3AYN6              	100.00%
Bootstrap support for C0NCX6 as seed ortholog is 100%.
Bootstrap support for D3AYN6 as seed ortholog is 100%.

Group of orthologs #569. Best score 306 bits
Score difference with first non-orthologous sequence - A.capsulata:306 P.pallidum:306

C0NC71              	100.00%		D3BAR7              	100.00%
Bootstrap support for C0NC71 as seed ortholog is 100%.
Bootstrap support for D3BAR7 as seed ortholog is 100%.

Group of orthologs #570. Best score 305 bits
Score difference with first non-orthologous sequence - A.capsulata:51 P.pallidum:75

C0NE89              	100.00%		D3BDH0              	100.00%
Bootstrap support for C0NE89 as seed ortholog is 89%.
Bootstrap support for D3BDH0 as seed ortholog is 94%.

Group of orthologs #571. Best score 305 bits
Score difference with first non-orthologous sequence - A.capsulata:305 P.pallidum:305

C0NDV1              	100.00%		D3BMA3              	100.00%
Bootstrap support for C0NDV1 as seed ortholog is 100%.
Bootstrap support for D3BMA3 as seed ortholog is 100%.

Group of orthologs #572. Best score 305 bits
Score difference with first non-orthologous sequence - A.capsulata:160 P.pallidum:249

C0NV12              	100.00%		D3B9R3              	100.00%
Bootstrap support for C0NV12 as seed ortholog is 99%.
Bootstrap support for D3B9R3 as seed ortholog is 100%.

Group of orthologs #573. Best score 304 bits
Score difference with first non-orthologous sequence - A.capsulata:304 P.pallidum:190

C0NZQ8              	100.00%		D3B650              	100.00%
Bootstrap support for C0NZQ8 as seed ortholog is 100%.
Bootstrap support for D3B650 as seed ortholog is 91%.

Group of orthologs #574. Best score 304 bits
Score difference with first non-orthologous sequence - A.capsulata:205 P.pallidum:179

C0NB15              	100.00%		D3BVR5              	100.00%
Bootstrap support for C0NB15 as seed ortholog is 100%.
Bootstrap support for D3BVR5 as seed ortholog is 100%.

Group of orthologs #575. Best score 303 bits
Score difference with first non-orthologous sequence - A.capsulata:303 P.pallidum:303

C0NSN5              	100.00%		D3AZZ9              	100.00%
Bootstrap support for C0NSN5 as seed ortholog is 100%.
Bootstrap support for D3AZZ9 as seed ortholog is 100%.

Group of orthologs #576. Best score 303 bits
Score difference with first non-orthologous sequence - A.capsulata:303 P.pallidum:156

C0NQQ9              	100.00%		D3BTY6              	100.00%
Bootstrap support for C0NQQ9 as seed ortholog is 100%.
Bootstrap support for D3BTY6 as seed ortholog is 100%.

Group of orthologs #577. Best score 302 bits
Score difference with first non-orthologous sequence - A.capsulata:302 P.pallidum:302

C0NPZ2              	100.00%		D3AZF5              	100.00%
Bootstrap support for C0NPZ2 as seed ortholog is 100%.
Bootstrap support for D3AZF5 as seed ortholog is 100%.

Group of orthologs #578. Best score 302 bits
Score difference with first non-orthologous sequence - A.capsulata:302 P.pallidum:43

C0NFA5              	100.00%		D3BA25              	100.00%
Bootstrap support for C0NFA5 as seed ortholog is 100%.
Bootstrap support for D3BA25 as seed ortholog is 77%.

Group of orthologs #579. Best score 301 bits
Score difference with first non-orthologous sequence - A.capsulata:301 P.pallidum:301

C0NLU7              	100.00%		D3B567              	100.00%
Bootstrap support for C0NLU7 as seed ortholog is 100%.
Bootstrap support for D3B567 as seed ortholog is 100%.

Group of orthologs #580. Best score 301 bits
Score difference with first non-orthologous sequence - A.capsulata:178 P.pallidum:219

C0NN99              	100.00%		D3BSL6              	100.00%
Bootstrap support for C0NN99 as seed ortholog is 100%.
Bootstrap support for D3BSL6 as seed ortholog is 100%.

Group of orthologs #581. Best score 300 bits
Score difference with first non-orthologous sequence - A.capsulata:300 P.pallidum:300

C0NT48              	100.00%		D3BES1              	100.00%
                    	       		D3BGX1              	73.95%
Bootstrap support for C0NT48 as seed ortholog is 100%.
Bootstrap support for D3BES1 as seed ortholog is 100%.

Group of orthologs #582. Best score 300 bits
Score difference with first non-orthologous sequence - A.capsulata:200 P.pallidum:147

C0NJJ8              	100.00%		D3BBA4              	100.00%
Bootstrap support for C0NJJ8 as seed ortholog is 100%.
Bootstrap support for D3BBA4 as seed ortholog is 99%.

Group of orthologs #583. Best score 299 bits
Score difference with first non-orthologous sequence - A.capsulata:299 P.pallidum:59

C0NQK0              	100.00%		D3B217              	100.00%
Bootstrap support for C0NQK0 as seed ortholog is 100%.
Bootstrap support for D3B217 as seed ortholog is 83%.

Group of orthologs #584. Best score 299 bits
Score difference with first non-orthologous sequence - A.capsulata:168 P.pallidum:115

C0NFP2              	100.00%		D3BUX2              	100.00%
Bootstrap support for C0NFP2 as seed ortholog is 100%.
Bootstrap support for D3BUX2 as seed ortholog is 99%.

Group of orthologs #585. Best score 298 bits
Score difference with first non-orthologous sequence - A.capsulata:82 P.pallidum:95

C0NPQ8              	100.00%		D3AYN1              	100.00%
Bootstrap support for C0NPQ8 as seed ortholog is 97%.
Bootstrap support for D3AYN1 as seed ortholog is 98%.

Group of orthologs #586. Best score 298 bits
Score difference with first non-orthologous sequence - A.capsulata:298 P.pallidum:298

C0NZE5              	100.00%		D3BEZ3              	100.00%
Bootstrap support for C0NZE5 as seed ortholog is 100%.
Bootstrap support for D3BEZ3 as seed ortholog is 100%.

Group of orthologs #587. Best score 298 bits
Score difference with first non-orthologous sequence - A.capsulata:298 P.pallidum:298

C0NTZ5              	100.00%		D3BTM3              	100.00%
Bootstrap support for C0NTZ5 as seed ortholog is 100%.
Bootstrap support for D3BTM3 as seed ortholog is 100%.

Group of orthologs #588. Best score 297 bits
Score difference with first non-orthologous sequence - A.capsulata:297 P.pallidum:216

C0ND28              	100.00%		D3BNN4              	100.00%
Bootstrap support for C0ND28 as seed ortholog is 100%.
Bootstrap support for D3BNN4 as seed ortholog is 100%.

Group of orthologs #589. Best score 297 bits
Score difference with first non-orthologous sequence - A.capsulata:297 P.pallidum:297

C0NJU5              	100.00%		D3BLY8              	100.00%
Bootstrap support for C0NJU5 as seed ortholog is 100%.
Bootstrap support for D3BLY8 as seed ortholog is 100%.

Group of orthologs #590. Best score 297 bits
Score difference with first non-orthologous sequence - A.capsulata:79 P.pallidum:297

C0NLF4              	100.00%		D3BLX9              	100.00%
Bootstrap support for C0NLF4 as seed ortholog is 91%.
Bootstrap support for D3BLX9 as seed ortholog is 100%.

Group of orthologs #591. Best score 297 bits
Score difference with first non-orthologous sequence - A.capsulata:297 P.pallidum:297

C0NYP3              	100.00%		D3BGU1              	100.00%
Bootstrap support for C0NYP3 as seed ortholog is 100%.
Bootstrap support for D3BGU1 as seed ortholog is 100%.

Group of orthologs #592. Best score 297 bits
Score difference with first non-orthologous sequence - A.capsulata:297 P.pallidum:297

C0NV36              	100.00%		D3BR41              	100.00%
Bootstrap support for C0NV36 as seed ortholog is 100%.
Bootstrap support for D3BR41 as seed ortholog is 100%.

Group of orthologs #593. Best score 296 bits
Score difference with first non-orthologous sequence - A.capsulata:6 P.pallidum:296

C0NDI7              	100.00%		D3BP86              	100.00%
C0NNN2              	13.33%		
Bootstrap support for C0NDI7 as seed ortholog is 46%.
Alternative seed ortholog is C0NCC1 (6 bits away from this cluster)
Bootstrap support for D3BP86 as seed ortholog is 100%.

Group of orthologs #594. Best score 296 bits
Score difference with first non-orthologous sequence - A.capsulata:296 P.pallidum:296

C0NAK0              	100.00%		D3B3W9              	100.00%
Bootstrap support for C0NAK0 as seed ortholog is 100%.
Bootstrap support for D3B3W9 as seed ortholog is 100%.

Group of orthologs #595. Best score 296 bits
Score difference with first non-orthologous sequence - A.capsulata:296 P.pallidum:296

C0NRR1              	100.00%		D3B2U3              	100.00%
Bootstrap support for C0NRR1 as seed ortholog is 100%.
Bootstrap support for D3B2U3 as seed ortholog is 100%.

Group of orthologs #596. Best score 296 bits
Score difference with first non-orthologous sequence - A.capsulata:296 P.pallidum:296

C0NM29              	100.00%		D3BKF9              	100.00%
Bootstrap support for C0NM29 as seed ortholog is 100%.
Bootstrap support for D3BKF9 as seed ortholog is 100%.

Group of orthologs #597. Best score 296 bits
Score difference with first non-orthologous sequence - A.capsulata:296 P.pallidum:182

C0NYE5              	100.00%		D3BQZ8              	100.00%
Bootstrap support for C0NYE5 as seed ortholog is 100%.
Bootstrap support for D3BQZ8 as seed ortholog is 100%.

Group of orthologs #598. Best score 295 bits
Score difference with first non-orthologous sequence - A.capsulata:127 P.pallidum:137

C0ND75              	100.00%		D3B9E0              	100.00%
Bootstrap support for C0ND75 as seed ortholog is 100%.
Bootstrap support for D3B9E0 as seed ortholog is 100%.

Group of orthologs #599. Best score 295 bits
Score difference with first non-orthologous sequence - A.capsulata:295 P.pallidum:295

C0NQC7              	100.00%		D3B0H6              	100.00%
Bootstrap support for C0NQC7 as seed ortholog is 100%.
Bootstrap support for D3B0H6 as seed ortholog is 100%.

Group of orthologs #600. Best score 295 bits
Score difference with first non-orthologous sequence - A.capsulata:208 P.pallidum:186

C0NUF9              	100.00%		D3B2T1              	100.00%
Bootstrap support for C0NUF9 as seed ortholog is 100%.
Bootstrap support for D3B2T1 as seed ortholog is 100%.

Group of orthologs #601. Best score 294 bits
Score difference with first non-orthologous sequence - A.capsulata:294 P.pallidum:294

C0NAY3              	100.00%		D3AWY5              	100.00%
Bootstrap support for C0NAY3 as seed ortholog is 100%.
Bootstrap support for D3AWY5 as seed ortholog is 100%.

Group of orthologs #602. Best score 294 bits
Score difference with first non-orthologous sequence - A.capsulata:294 P.pallidum:294

C0NQJ7              	100.00%		D3AVU4              	100.00%
Bootstrap support for C0NQJ7 as seed ortholog is 100%.
Bootstrap support for D3AVU4 as seed ortholog is 100%.

Group of orthologs #603. Best score 294 bits
Score difference with first non-orthologous sequence - A.capsulata:294 P.pallidum:294

C0NEE7              	100.00%		D3BAJ3              	100.00%
Bootstrap support for C0NEE7 as seed ortholog is 100%.
Bootstrap support for D3BAJ3 as seed ortholog is 100%.

Group of orthologs #604. Best score 294 bits
Score difference with first non-orthologous sequence - A.capsulata:294 P.pallidum:294

C0NH55              	100.00%		D3BA00              	100.00%
Bootstrap support for C0NH55 as seed ortholog is 100%.
Bootstrap support for D3BA00 as seed ortholog is 100%.

Group of orthologs #605. Best score 294 bits
Score difference with first non-orthologous sequence - A.capsulata:294 P.pallidum:294

C0NDT9              	100.00%		D3BKY4              	100.00%
Bootstrap support for C0NDT9 as seed ortholog is 100%.
Bootstrap support for D3BKY4 as seed ortholog is 100%.

Group of orthologs #606. Best score 294 bits
Score difference with first non-orthologous sequence - A.capsulata:203 P.pallidum:216

C0NZ31              	100.00%		D3B601              	100.00%
Bootstrap support for C0NZ31 as seed ortholog is 100%.
Bootstrap support for D3B601 as seed ortholog is 99%.

Group of orthologs #607. Best score 294 bits
Score difference with first non-orthologous sequence - A.capsulata:294 P.pallidum:294

C0NTR0              	100.00%		D3BV77              	100.00%
Bootstrap support for C0NTR0 as seed ortholog is 100%.
Bootstrap support for D3BV77 as seed ortholog is 100%.

Group of orthologs #608. Best score 293 bits
Score difference with first non-orthologous sequence - A.capsulata:293 P.pallidum:293

C0NNT9              	100.00%		D3AZB0              	100.00%
Bootstrap support for C0NNT9 as seed ortholog is 100%.
Bootstrap support for D3AZB0 as seed ortholog is 100%.

Group of orthologs #609. Best score 293 bits
Score difference with first non-orthologous sequence - A.capsulata:293 P.pallidum:293

C0NSP0              	100.00%		D3AX75              	100.00%
Bootstrap support for C0NSP0 as seed ortholog is 100%.
Bootstrap support for D3AX75 as seed ortholog is 100%.

Group of orthologs #610. Best score 292 bits
Score difference with first non-orthologous sequence - A.capsulata:177 P.pallidum:292

C0NNU0              	100.00%		D3B748              	100.00%
Bootstrap support for C0NNU0 as seed ortholog is 95%.
Bootstrap support for D3B748 as seed ortholog is 100%.

Group of orthologs #611. Best score 292 bits
Score difference with first non-orthologous sequence - A.capsulata:292 P.pallidum:186

C0NRI0              	100.00%		D3B9R2              	100.00%
Bootstrap support for C0NRI0 as seed ortholog is 100%.
Bootstrap support for D3B9R2 as seed ortholog is 99%.

Group of orthologs #612. Best score 291 bits
Score difference with first non-orthologous sequence - A.capsulata:291 P.pallidum:291

C0NIY3              	100.00%		D3B114              	100.00%
Bootstrap support for C0NIY3 as seed ortholog is 100%.
Bootstrap support for D3B114 as seed ortholog is 100%.

Group of orthologs #613. Best score 291 bits
Score difference with first non-orthologous sequence - A.capsulata:291 P.pallidum:291

C0NCP4              	100.00%		D3BLP0              	100.00%
Bootstrap support for C0NCP4 as seed ortholog is 100%.
Bootstrap support for D3BLP0 as seed ortholog is 100%.

Group of orthologs #614. Best score 291 bits
Score difference with first non-orthologous sequence - A.capsulata:291 P.pallidum:291

C0NHM8              	100.00%		D3BP70              	100.00%
Bootstrap support for C0NHM8 as seed ortholog is 100%.
Bootstrap support for D3BP70 as seed ortholog is 100%.

Group of orthologs #615. Best score 290 bits
Score difference with first non-orthologous sequence - A.capsulata:290 P.pallidum:290

C0NR37              	100.00%		D3BCP1              	100.00%
Bootstrap support for C0NR37 as seed ortholog is 100%.
Bootstrap support for D3BCP1 as seed ortholog is 100%.

Group of orthologs #616. Best score 290 bits
Score difference with first non-orthologous sequence - A.capsulata:290 P.pallidum:290

C0NRA4              	100.00%		D3BSN3              	100.00%
Bootstrap support for C0NRA4 as seed ortholog is 100%.
Bootstrap support for D3BSN3 as seed ortholog is 100%.

Group of orthologs #617. Best score 289 bits
Score difference with first non-orthologous sequence - A.capsulata:289 P.pallidum:289

C0NGL7              	100.00%		D3BBG3              	100.00%
Bootstrap support for C0NGL7 as seed ortholog is 100%.
Bootstrap support for D3BBG3 as seed ortholog is 100%.

Group of orthologs #618. Best score 289 bits
Score difference with first non-orthologous sequence - A.capsulata:289 P.pallidum:289

C0NTZ0              	100.00%		D3BL83              	100.00%
Bootstrap support for C0NTZ0 as seed ortholog is 100%.
Bootstrap support for D3BL83 as seed ortholog is 100%.

Group of orthologs #619. Best score 289 bits
Score difference with first non-orthologous sequence - A.capsulata:289 P.pallidum:289

C0NRU2              	100.00%		D3BSE8              	100.00%
Bootstrap support for C0NRU2 as seed ortholog is 100%.
Bootstrap support for D3BSE8 as seed ortholog is 100%.

Group of orthologs #620. Best score 289 bits
Score difference with first non-orthologous sequence - A.capsulata:289 P.pallidum:289

C0NXA5              	100.00%		D3BVG5              	100.00%
Bootstrap support for C0NXA5 as seed ortholog is 100%.
Bootstrap support for D3BVG5 as seed ortholog is 100%.

Group of orthologs #621. Best score 288 bits
Score difference with first non-orthologous sequence - A.capsulata:288 P.pallidum:288

C0NCX5              	100.00%		D3B8K8              	100.00%
Bootstrap support for C0NCX5 as seed ortholog is 100%.
Bootstrap support for D3B8K8 as seed ortholog is 100%.

Group of orthologs #622. Best score 288 bits
Score difference with first non-orthologous sequence - A.capsulata:288 P.pallidum:288

C0NBZ7              	100.00%		D3BLH6              	100.00%
Bootstrap support for C0NBZ7 as seed ortholog is 100%.
Bootstrap support for D3BLH6 as seed ortholog is 100%.

Group of orthologs #623. Best score 288 bits
Score difference with first non-orthologous sequence - A.capsulata:209 P.pallidum:164

C0NDR4              	100.00%		D3BL25              	100.00%
Bootstrap support for C0NDR4 as seed ortholog is 99%.
Bootstrap support for D3BL25 as seed ortholog is 99%.

Group of orthologs #624. Best score 288 bits
Score difference with first non-orthologous sequence - A.capsulata:288 P.pallidum:288

C0NP76              	100.00%		D3BM11              	100.00%
Bootstrap support for C0NP76 as seed ortholog is 100%.
Bootstrap support for D3BM11 as seed ortholog is 100%.

Group of orthologs #625. Best score 287 bits
Score difference with first non-orthologous sequence - A.capsulata:287 P.pallidum:287

C0NB31              	100.00%		D3BEV0              	100.00%
Bootstrap support for C0NB31 as seed ortholog is 100%.
Bootstrap support for D3BEV0 as seed ortholog is 100%.

Group of orthologs #626. Best score 287 bits
Score difference with first non-orthologous sequence - A.capsulata:287 P.pallidum:287

C0NS55              	100.00%		D3B632              	100.00%
Bootstrap support for C0NS55 as seed ortholog is 100%.
Bootstrap support for D3B632 as seed ortholog is 100%.

Group of orthologs #627. Best score 287 bits
Score difference with first non-orthologous sequence - A.capsulata:287 P.pallidum:287

C0ND21              	100.00%		D3BK44              	100.00%
Bootstrap support for C0ND21 as seed ortholog is 100%.
Bootstrap support for D3BK44 as seed ortholog is 100%.

Group of orthologs #628. Best score 287 bits
Score difference with first non-orthologous sequence - A.capsulata:287 P.pallidum:287

C0NXR7              	100.00%		D3B7Y2              	100.00%
Bootstrap support for C0NXR7 as seed ortholog is 100%.
Bootstrap support for D3B7Y2 as seed ortholog is 100%.

Group of orthologs #629. Best score 287 bits
Score difference with first non-orthologous sequence - A.capsulata:287 P.pallidum:287

C0NNS2              	100.00%		D3BH79              	100.00%
Bootstrap support for C0NNS2 as seed ortholog is 100%.
Bootstrap support for D3BH79 as seed ortholog is 100%.

Group of orthologs #630. Best score 287 bits
Score difference with first non-orthologous sequence - A.capsulata:287 P.pallidum:287

C0NZ37              	100.00%		D3B7Y5              	100.00%
Bootstrap support for C0NZ37 as seed ortholog is 100%.
Bootstrap support for D3B7Y5 as seed ortholog is 100%.

Group of orthologs #631. Best score 287 bits
Score difference with first non-orthologous sequence - A.capsulata:287 P.pallidum:287

C0NIT4              	100.00%		D3BVM9              	100.00%
Bootstrap support for C0NIT4 as seed ortholog is 100%.
Bootstrap support for D3BVM9 as seed ortholog is 100%.

Group of orthologs #632. Best score 286 bits
Score difference with first non-orthologous sequence - A.capsulata:286 P.pallidum:286

C0NA68              	100.00%		D3B206              	100.00%
Bootstrap support for C0NA68 as seed ortholog is 100%.
Bootstrap support for D3B206 as seed ortholog is 100%.

Group of orthologs #633. Best score 285 bits
Score difference with first non-orthologous sequence - A.capsulata:25 P.pallidum:16

C0NPB1              	100.00%		D3B280              	100.00%
Bootstrap support for C0NPB1 as seed ortholog is 81%.
Bootstrap support for D3B280 as seed ortholog is 66%.
Alternative seed ortholog is D3BV53 (16 bits away from this cluster)

Group of orthologs #634. Best score 285 bits
Score difference with first non-orthologous sequence - A.capsulata:285 P.pallidum:285

C0NRM3              	100.00%		D3B3A5              	100.00%
Bootstrap support for C0NRM3 as seed ortholog is 100%.
Bootstrap support for D3B3A5 as seed ortholog is 100%.

Group of orthologs #635. Best score 285 bits
Score difference with first non-orthologous sequence - A.capsulata:285 P.pallidum:285

C0NZZ8              	100.00%		D3AZP5              	100.00%
Bootstrap support for C0NZZ8 as seed ortholog is 100%.
Bootstrap support for D3AZP5 as seed ortholog is 100%.

Group of orthologs #636. Best score 285 bits
Score difference with first non-orthologous sequence - A.capsulata:285 P.pallidum:285

C0NY87              	100.00%		D3B5U9              	100.00%
Bootstrap support for C0NY87 as seed ortholog is 100%.
Bootstrap support for D3B5U9 as seed ortholog is 100%.

Group of orthologs #637. Best score 283 bits
Score difference with first non-orthologous sequence - A.capsulata:142 P.pallidum:20

C0P0C9              	100.00%		D3BP55              	100.00%
                    	       		D3BLV3              	6.61%
Bootstrap support for C0P0C9 as seed ortholog is 100%.
Bootstrap support for D3BP55 as seed ortholog is 78%.

Group of orthologs #638. Best score 282 bits
Score difference with first non-orthologous sequence - A.capsulata:196 P.pallidum:178

C0NHE6              	100.00%		D3B7P1              	100.00%
                    	       		D3BSF4              	7.59%
Bootstrap support for C0NHE6 as seed ortholog is 100%.
Bootstrap support for D3B7P1 as seed ortholog is 100%.

Group of orthologs #639. Best score 282 bits
Score difference with first non-orthologous sequence - A.capsulata:282 P.pallidum:282

C0NFB0              	100.00%		D3B4Z7              	100.00%
Bootstrap support for C0NFB0 as seed ortholog is 100%.
Bootstrap support for D3B4Z7 as seed ortholog is 100%.

Group of orthologs #640. Best score 282 bits
Score difference with first non-orthologous sequence - A.capsulata:213 P.pallidum:228

C0NSE7              	100.00%		D3B6G7              	100.00%
Bootstrap support for C0NSE7 as seed ortholog is 100%.
Bootstrap support for D3B6G7 as seed ortholog is 100%.

Group of orthologs #641. Best score 282 bits
Score difference with first non-orthologous sequence - A.capsulata:93 P.pallidum:48

C0NVX3              	100.00%		D3BAU8              	100.00%
Bootstrap support for C0NVX3 as seed ortholog is 98%.
Bootstrap support for D3BAU8 as seed ortholog is 92%.

Group of orthologs #642. Best score 282 bits
Score difference with first non-orthologous sequence - A.capsulata:282 P.pallidum:282

C0NFD8              	100.00%		D3BSV5              	100.00%
Bootstrap support for C0NFD8 as seed ortholog is 100%.
Bootstrap support for D3BSV5 as seed ortholog is 100%.

Group of orthologs #643. Best score 282 bits
Score difference with first non-orthologous sequence - A.capsulata:30 P.pallidum:23

C0NKD2              	100.00%		D3BST6              	100.00%
Bootstrap support for C0NKD2 as seed ortholog is 78%.
Bootstrap support for D3BST6 as seed ortholog is 70%.
Alternative seed ortholog is D3BCK5 (23 bits away from this cluster)

Group of orthologs #644. Best score 282 bits
Score difference with first non-orthologous sequence - A.capsulata:282 P.pallidum:125

C0NZ67              	100.00%		D3BJ95              	100.00%
Bootstrap support for C0NZ67 as seed ortholog is 100%.
Bootstrap support for D3BJ95 as seed ortholog is 99%.

Group of orthologs #645. Best score 282 bits
Score difference with first non-orthologous sequence - A.capsulata:282 P.pallidum:282

C0NUK1              	100.00%		D3BU70              	100.00%
Bootstrap support for C0NUK1 as seed ortholog is 100%.
Bootstrap support for D3BU70 as seed ortholog is 100%.

Group of orthologs #646. Best score 281 bits
Score difference with first non-orthologous sequence - A.capsulata:281 P.pallidum:281

C0NXS2              	100.00%		D3BB15              	100.00%
                    	       		D3BIM9              	25.59%
Bootstrap support for C0NXS2 as seed ortholog is 100%.
Bootstrap support for D3BB15 as seed ortholog is 100%.

Group of orthologs #647. Best score 281 bits
Score difference with first non-orthologous sequence - A.capsulata:202 P.pallidum:281

C0NJX8              	100.00%		D3AWX8              	100.00%
Bootstrap support for C0NJX8 as seed ortholog is 100%.
Bootstrap support for D3AWX8 as seed ortholog is 100%.

Group of orthologs #648. Best score 281 bits
Score difference with first non-orthologous sequence - A.capsulata:281 P.pallidum:281

C0NDD3              	100.00%		D3B4U2              	100.00%
Bootstrap support for C0NDD3 as seed ortholog is 100%.
Bootstrap support for D3B4U2 as seed ortholog is 100%.

Group of orthologs #649. Best score 281 bits
Score difference with first non-orthologous sequence - A.capsulata:281 P.pallidum:281

C0NNK9              	100.00%		D3B6D7              	100.00%
Bootstrap support for C0NNK9 as seed ortholog is 100%.
Bootstrap support for D3B6D7 as seed ortholog is 100%.

Group of orthologs #650. Best score 281 bits
Score difference with first non-orthologous sequence - A.capsulata:131 P.pallidum:58

C0NYV5              	100.00%		D3BL86              	100.00%
Bootstrap support for C0NYV5 as seed ortholog is 100%.
Bootstrap support for D3BL86 as seed ortholog is 99%.

Group of orthologs #651. Best score 281 bits
Score difference with first non-orthologous sequence - A.capsulata:281 P.pallidum:188

C0P156              	100.00%		D3BPL1              	100.00%
Bootstrap support for C0P156 as seed ortholog is 100%.
Bootstrap support for D3BPL1 as seed ortholog is 99%.

Group of orthologs #652. Best score 279 bits
Score difference with first non-orthologous sequence - A.capsulata:279 P.pallidum:279

C0NEA4              	100.00%		D3B6X7              	100.00%
Bootstrap support for C0NEA4 as seed ortholog is 100%.
Bootstrap support for D3B6X7 as seed ortholog is 100%.

Group of orthologs #653. Best score 279 bits
Score difference with first non-orthologous sequence - A.capsulata:279 P.pallidum:279

C0P0X7              	100.00%		D3B418              	100.00%
Bootstrap support for C0P0X7 as seed ortholog is 100%.
Bootstrap support for D3B418 as seed ortholog is 100%.

Group of orthologs #654. Best score 279 bits
Score difference with first non-orthologous sequence - A.capsulata:279 P.pallidum:151

C0NAE1              	100.00%		D3BVF2              	100.00%
Bootstrap support for C0NAE1 as seed ortholog is 100%.
Bootstrap support for D3BVF2 as seed ortholog is 99%.

Group of orthologs #655. Best score 278 bits
Score difference with first non-orthologous sequence - A.capsulata:278 P.pallidum:76

C0NPD0              	100.00%		D3BF32              	100.00%
                    	       		D3BS76              	15.14%
                    	       		D3BS79              	14.36%
Bootstrap support for C0NPD0 as seed ortholog is 100%.
Bootstrap support for D3BF32 as seed ortholog is 97%.

Group of orthologs #656. Best score 278 bits
Score difference with first non-orthologous sequence - A.capsulata:278 P.pallidum:278

C0NLP3              	100.00%		D3BCZ8              	100.00%
Bootstrap support for C0NLP3 as seed ortholog is 100%.
Bootstrap support for D3BCZ8 as seed ortholog is 100%.

Group of orthologs #657. Best score 278 bits
Score difference with first non-orthologous sequence - A.capsulata:278 P.pallidum:278

C0P118              	100.00%		D3B2U8              	100.00%
Bootstrap support for C0P118 as seed ortholog is 100%.
Bootstrap support for D3B2U8 as seed ortholog is 100%.

Group of orthologs #658. Best score 278 bits
Score difference with first non-orthologous sequence - A.capsulata:278 P.pallidum:278

C0NEL8              	100.00%		D3BTM5              	100.00%
Bootstrap support for C0NEL8 as seed ortholog is 100%.
Bootstrap support for D3BTM5 as seed ortholog is 100%.

Group of orthologs #659. Best score 277 bits
Score difference with first non-orthologous sequence - A.capsulata:187 P.pallidum:277

C0NCT8              	100.00%		D3B0N9              	100.00%
Bootstrap support for C0NCT8 as seed ortholog is 100%.
Bootstrap support for D3B0N9 as seed ortholog is 100%.

Group of orthologs #660. Best score 277 bits
Score difference with first non-orthologous sequence - A.capsulata:132 P.pallidum:59

C0NBA3              	100.00%		D3BFF7              	100.00%
Bootstrap support for C0NBA3 as seed ortholog is 99%.
Bootstrap support for D3BFF7 as seed ortholog is 94%.

Group of orthologs #661. Best score 277 bits
Score difference with first non-orthologous sequence - A.capsulata:107 P.pallidum:124

C0NI40              	100.00%		D3B9K7              	100.00%
Bootstrap support for C0NI40 as seed ortholog is 97%.
Bootstrap support for D3B9K7 as seed ortholog is 96%.

Group of orthologs #662. Best score 277 bits
Score difference with first non-orthologous sequence - A.capsulata:277 P.pallidum:277

C0NZS2              	100.00%		D3BJR6              	100.00%
Bootstrap support for C0NZS2 as seed ortholog is 100%.
Bootstrap support for D3BJR6 as seed ortholog is 100%.

Group of orthologs #663. Best score 276 bits
Score difference with first non-orthologous sequence - A.capsulata:276 P.pallidum:276

C0NNH8              	100.00%		D3BPG0              	100.00%
Bootstrap support for C0NNH8 as seed ortholog is 100%.
Bootstrap support for D3BPG0 as seed ortholog is 100%.

Group of orthologs #664. Best score 275 bits
Score difference with first non-orthologous sequence - A.capsulata:275 P.pallidum:275

C0NQI1              	100.00%		D3AXN0              	100.00%
Bootstrap support for C0NQI1 as seed ortholog is 100%.
Bootstrap support for D3AXN0 as seed ortholog is 100%.

Group of orthologs #665. Best score 275 bits
Score difference with first non-orthologous sequence - A.capsulata:275 P.pallidum:275

C0NQ87              	100.00%		D3B761              	100.00%
Bootstrap support for C0NQ87 as seed ortholog is 100%.
Bootstrap support for D3B761 as seed ortholog is 100%.

Group of orthologs #666. Best score 275 bits
Score difference with first non-orthologous sequence - A.capsulata:275 P.pallidum:275

C0NEL5              	100.00%		D3BTS0              	100.00%
Bootstrap support for C0NEL5 as seed ortholog is 100%.
Bootstrap support for D3BTS0 as seed ortholog is 100%.

Group of orthologs #667. Best score 274 bits
Score difference with first non-orthologous sequence - A.capsulata:202 P.pallidum:274

C0NJV1              	100.00%		D3BMX7              	100.00%
C0NBH2              	8.15%		
Bootstrap support for C0NJV1 as seed ortholog is 100%.
Bootstrap support for D3BMX7 as seed ortholog is 100%.

Group of orthologs #668. Best score 274 bits
Score difference with first non-orthologous sequence - A.capsulata:150 P.pallidum:95

C0NU86              	100.00%		D3AYV5              	100.00%
Bootstrap support for C0NU86 as seed ortholog is 99%.
Bootstrap support for D3AYV5 as seed ortholog is 95%.

Group of orthologs #669. Best score 274 bits
Score difference with first non-orthologous sequence - A.capsulata:274 P.pallidum:274

C0NCL1              	100.00%		D3BL62              	100.00%
Bootstrap support for C0NCL1 as seed ortholog is 100%.
Bootstrap support for D3BL62 as seed ortholog is 100%.

Group of orthologs #670. Best score 274 bits
Score difference with first non-orthologous sequence - A.capsulata:274 P.pallidum:274

C0NKR5              	100.00%		D3BP67              	100.00%
Bootstrap support for C0NKR5 as seed ortholog is 100%.
Bootstrap support for D3BP67 as seed ortholog is 100%.

Group of orthologs #671. Best score 273 bits
Score difference with first non-orthologous sequence - A.capsulata:273 P.pallidum:273

C0NI50              	100.00%		D3BGN9              	100.00%
                    	       		D3AW08              	39.82%
                    	       		D3B435              	23.33%
Bootstrap support for C0NI50 as seed ortholog is 100%.
Bootstrap support for D3BGN9 as seed ortholog is 100%.

Group of orthologs #672. Best score 273 bits
Score difference with first non-orthologous sequence - A.capsulata:207 P.pallidum:273

C0NGQ6              	100.00%		D3AYA4              	100.00%
Bootstrap support for C0NGQ6 as seed ortholog is 99%.
Bootstrap support for D3AYA4 as seed ortholog is 100%.

Group of orthologs #673. Best score 272 bits
Score difference with first non-orthologous sequence - A.capsulata:272 P.pallidum:272

C0NK95              	100.00%		D3AVN8              	100.00%
Bootstrap support for C0NK95 as seed ortholog is 100%.
Bootstrap support for D3AVN8 as seed ortholog is 100%.

Group of orthologs #674. Best score 272 bits
Score difference with first non-orthologous sequence - A.capsulata:133 P.pallidum:110

C0NXT7              	100.00%		D3BGI7              	100.00%
Bootstrap support for C0NXT7 as seed ortholog is 100%.
Bootstrap support for D3BGI7 as seed ortholog is 100%.

Group of orthologs #675. Best score 271 bits
Score difference with first non-orthologous sequence - A.capsulata:271 P.pallidum:271

C0NV20              	100.00%		D3AVQ5              	100.00%
Bootstrap support for C0NV20 as seed ortholog is 100%.
Bootstrap support for D3AVQ5 as seed ortholog is 100%.

Group of orthologs #676. Best score 271 bits
Score difference with first non-orthologous sequence - A.capsulata:271 P.pallidum:271

C0NSD5              	100.00%		D3AZB4              	100.00%
Bootstrap support for C0NSD5 as seed ortholog is 100%.
Bootstrap support for D3AZB4 as seed ortholog is 100%.

Group of orthologs #677. Best score 271 bits
Score difference with first non-orthologous sequence - A.capsulata:133 P.pallidum:116

C0NYE4              	100.00%		D3AY59              	100.00%
Bootstrap support for C0NYE4 as seed ortholog is 100%.
Bootstrap support for D3AY59 as seed ortholog is 100%.

Group of orthologs #678. Best score 271 bits
Score difference with first non-orthologous sequence - A.capsulata:271 P.pallidum:271

C0NQV9              	100.00%		D3BQQ9              	100.00%
Bootstrap support for C0NQV9 as seed ortholog is 100%.
Bootstrap support for D3BQQ9 as seed ortholog is 100%.

Group of orthologs #679. Best score 270 bits
Score difference with first non-orthologous sequence - A.capsulata:270 P.pallidum:270

C0NXS9              	100.00%		D3B3C0              	100.00%
Bootstrap support for C0NXS9 as seed ortholog is 100%.
Bootstrap support for D3B3C0 as seed ortholog is 100%.

Group of orthologs #680. Best score 270 bits
Score difference with first non-orthologous sequence - A.capsulata:168 P.pallidum:129

C0NP16              	100.00%		D3BG42              	100.00%
Bootstrap support for C0NP16 as seed ortholog is 99%.
Bootstrap support for D3BG42 as seed ortholog is 99%.

Group of orthologs #681. Best score 270 bits
Score difference with first non-orthologous sequence - A.capsulata:131 P.pallidum:131

C0NMP4              	100.00%		D3BM83              	100.00%
Bootstrap support for C0NMP4 as seed ortholog is 99%.
Bootstrap support for D3BM83 as seed ortholog is 99%.

Group of orthologs #682. Best score 269 bits
Score difference with first non-orthologous sequence - A.capsulata:27 P.pallidum:43

C0NRC3              	100.00%		D3B1J0              	100.00%
                    	       		D3BRV8              	17.62%
                    	       		D3BI33              	6.17%
Bootstrap support for C0NRC3 as seed ortholog is 74%.
Alternative seed ortholog is C0NI11 (27 bits away from this cluster)
Bootstrap support for D3B1J0 as seed ortholog is 89%.

Group of orthologs #683. Best score 269 bits
Score difference with first non-orthologous sequence - A.capsulata:269 P.pallidum:122

C0NHD9              	100.00%		D3BLP1              	100.00%
Bootstrap support for C0NHD9 as seed ortholog is 100%.
Bootstrap support for D3BLP1 as seed ortholog is 99%.

Group of orthologs #684. Best score 268 bits
Score difference with first non-orthologous sequence - A.capsulata:268 P.pallidum:268

C0NJY6              	100.00%		D3BTS5              	100.00%
C0NKX2              	5.23%		
Bootstrap support for C0NJY6 as seed ortholog is 100%.
Bootstrap support for D3BTS5 as seed ortholog is 100%.

Group of orthologs #685. Best score 268 bits
Score difference with first non-orthologous sequence - A.capsulata:268 P.pallidum:268

C0NMY4              	100.00%		D3B886              	100.00%
Bootstrap support for C0NMY4 as seed ortholog is 100%.
Bootstrap support for D3B886 as seed ortholog is 100%.

Group of orthologs #686. Best score 267 bits
Score difference with first non-orthologous sequence - A.capsulata:21 P.pallidum:58

C0P103              	100.00%		D3BAT3              	100.00%
Bootstrap support for C0P103 as seed ortholog is 73%.
Alternative seed ortholog is C0NSA0 (21 bits away from this cluster)
Bootstrap support for D3BAT3 as seed ortholog is 94%.

Group of orthologs #687. Best score 267 bits
Score difference with first non-orthologous sequence - A.capsulata:267 P.pallidum:267

C0NQD0              	100.00%		D3BLV1              	100.00%
Bootstrap support for C0NQD0 as seed ortholog is 100%.
Bootstrap support for D3BLV1 as seed ortholog is 100%.

Group of orthologs #688. Best score 267 bits
Score difference with first non-orthologous sequence - A.capsulata:267 P.pallidum:170

C0NT66              	100.00%		D3BM08              	100.00%
Bootstrap support for C0NT66 as seed ortholog is 100%.
Bootstrap support for D3BM08 as seed ortholog is 100%.

Group of orthologs #689. Best score 267 bits
Score difference with first non-orthologous sequence - A.capsulata:267 P.pallidum:267

C0P131              	100.00%		D3BT14              	100.00%
Bootstrap support for C0P131 as seed ortholog is 100%.
Bootstrap support for D3BT14 as seed ortholog is 100%.

Group of orthologs #690. Best score 266 bits
Score difference with first non-orthologous sequence - A.capsulata:266 P.pallidum:195

C0NEM5              	100.00%		D3BFK6              	100.00%
Bootstrap support for C0NEM5 as seed ortholog is 100%.
Bootstrap support for D3BFK6 as seed ortholog is 100%.

Group of orthologs #691. Best score 265 bits
Score difference with first non-orthologous sequence - A.capsulata:265 P.pallidum:265

C0NFG9              	100.00%		D3AY55              	100.00%
Bootstrap support for C0NFG9 as seed ortholog is 100%.
Bootstrap support for D3AY55 as seed ortholog is 100%.

Group of orthologs #692. Best score 263 bits
Score difference with first non-orthologous sequence - A.capsulata:263 P.pallidum:263

C0NWM0              	100.00%		D3AYA9              	100.00%
Bootstrap support for C0NWM0 as seed ortholog is 100%.
Bootstrap support for D3AYA9 as seed ortholog is 100%.

Group of orthologs #693. Best score 262 bits
Score difference with first non-orthologous sequence - A.capsulata:35 P.pallidum:262

C0NH28              	100.00%		D3B8S4              	100.00%
C0NWD3              	18.72%		
C0NQ44              	16.31%		
C0NGY0              	13.22%		
Bootstrap support for C0NH28 as seed ortholog is 62%.
Alternative seed ortholog is C0NAB2 (35 bits away from this cluster)
Bootstrap support for D3B8S4 as seed ortholog is 100%.

Group of orthologs #694. Best score 262 bits
Score difference with first non-orthologous sequence - A.capsulata:262 P.pallidum:262

C0ND52              	100.00%		D3B571              	100.00%
                    	       		D3BV09              	10.26%
Bootstrap support for C0ND52 as seed ortholog is 100%.
Bootstrap support for D3B571 as seed ortholog is 100%.

Group of orthologs #695. Best score 262 bits
Score difference with first non-orthologous sequence - A.capsulata:71 P.pallidum:146

C0NEE4              	100.00%		D3B2W2              	100.00%
Bootstrap support for C0NEE4 as seed ortholog is 90%.
Bootstrap support for D3B2W2 as seed ortholog is 99%.

Group of orthologs #696. Best score 262 bits
Score difference with first non-orthologous sequence - A.capsulata:164 P.pallidum:262

C0NL04              	100.00%		D3BBE5              	100.00%
Bootstrap support for C0NL04 as seed ortholog is 99%.
Bootstrap support for D3BBE5 as seed ortholog is 100%.

Group of orthologs #697. Best score 262 bits
Score difference with first non-orthologous sequence - A.capsulata:262 P.pallidum:262

C0P138              	100.00%		D3B4H2              	100.00%
Bootstrap support for C0P138 as seed ortholog is 100%.
Bootstrap support for D3B4H2 as seed ortholog is 100%.

Group of orthologs #698. Best score 262 bits
Score difference with first non-orthologous sequence - A.capsulata:82 P.pallidum:102

C0NPF8              	100.00%		D3BH28              	100.00%
Bootstrap support for C0NPF8 as seed ortholog is 96%.
Bootstrap support for D3BH28 as seed ortholog is 99%.

Group of orthologs #699. Best score 260 bits
Score difference with first non-orthologous sequence - A.capsulata:90 P.pallidum:260

C0ND81              	100.00%		D3B4Z8              	100.00%
                    	       		D3BHS8              	18.70%
Bootstrap support for C0ND81 as seed ortholog is 94%.
Bootstrap support for D3B4Z8 as seed ortholog is 100%.

Group of orthologs #700. Best score 260 bits
Score difference with first non-orthologous sequence - A.capsulata:162 P.pallidum:260

C0NBI7              	100.00%		D3B3B5              	100.00%
Bootstrap support for C0NBI7 as seed ortholog is 99%.
Bootstrap support for D3B3B5 as seed ortholog is 100%.

Group of orthologs #701. Best score 260 bits
Score difference with first non-orthologous sequence - A.capsulata:260 P.pallidum:260

C0NGA0              	100.00%		D3B0Y0              	100.00%
Bootstrap support for C0NGA0 as seed ortholog is 100%.
Bootstrap support for D3B0Y0 as seed ortholog is 100%.

Group of orthologs #702. Best score 260 bits
Score difference with first non-orthologous sequence - A.capsulata:260 P.pallidum:260

C0NFC7              	100.00%		D3B725              	100.00%
Bootstrap support for C0NFC7 as seed ortholog is 100%.
Bootstrap support for D3B725 as seed ortholog is 100%.

Group of orthologs #703. Best score 260 bits
Score difference with first non-orthologous sequence - A.capsulata:260 P.pallidum:119

C0NCL3              	100.00%		D3BA92              	100.00%
Bootstrap support for C0NCL3 as seed ortholog is 100%.
Bootstrap support for D3BA92 as seed ortholog is 99%.

Group of orthologs #704. Best score 260 bits
Score difference with first non-orthologous sequence - A.capsulata:260 P.pallidum:260

C0NU20              	100.00%		D3B573              	100.00%
Bootstrap support for C0NU20 as seed ortholog is 100%.
Bootstrap support for D3B573 as seed ortholog is 100%.

Group of orthologs #705. Best score 260 bits
Score difference with first non-orthologous sequence - A.capsulata:140 P.pallidum:94

C0NLF5              	100.00%		D3BEC0              	100.00%
Bootstrap support for C0NLF5 as seed ortholog is 99%.
Bootstrap support for D3BEC0 as seed ortholog is 98%.

Group of orthologs #706. Best score 260 bits
Score difference with first non-orthologous sequence - A.capsulata:260 P.pallidum:260

C0NVD9              	100.00%		D3BGB9              	100.00%
Bootstrap support for C0NVD9 as seed ortholog is 100%.
Bootstrap support for D3BGB9 as seed ortholog is 100%.

Group of orthologs #707. Best score 260 bits
Score difference with first non-orthologous sequence - A.capsulata:260 P.pallidum:260

C0NNJ6              	100.00%		D3BQ91              	100.00%
Bootstrap support for C0NNJ6 as seed ortholog is 100%.
Bootstrap support for D3BQ91 as seed ortholog is 100%.

Group of orthologs #708. Best score 259 bits
Score difference with first non-orthologous sequence - A.capsulata:259 P.pallidum:259

C0NZ78              	100.00%		D3BRV9              	100.00%
C0NYB0              	9.88%		
C0NIS8              	9.76%		
Bootstrap support for C0NZ78 as seed ortholog is 100%.
Bootstrap support for D3BRV9 as seed ortholog is 100%.

Group of orthologs #709. Best score 259 bits
Score difference with first non-orthologous sequence - A.capsulata:259 P.pallidum:259

C0NWZ3              	100.00%		D3BNL4              	100.00%
Bootstrap support for C0NWZ3 as seed ortholog is 100%.
Bootstrap support for D3BNL4 as seed ortholog is 100%.

Group of orthologs #710. Best score 258 bits
Score difference with first non-orthologous sequence - A.capsulata:258 P.pallidum:258

C0NC61              	100.00%		D3AZL5              	100.00%
Bootstrap support for C0NC61 as seed ortholog is 100%.
Bootstrap support for D3AZL5 as seed ortholog is 100%.

Group of orthologs #711. Best score 258 bits
Score difference with first non-orthologous sequence - A.capsulata:258 P.pallidum:258

C0NKL1              	100.00%		D3AWL4              	100.00%
Bootstrap support for C0NKL1 as seed ortholog is 100%.
Bootstrap support for D3AWL4 as seed ortholog is 100%.

Group of orthologs #712. Best score 257 bits
Score difference with first non-orthologous sequence - A.capsulata:257 P.pallidum:257

C0NSU3              	100.00%		D3B002              	100.00%
                    	       		D3BRX3              	6.76%
Bootstrap support for C0NSU3 as seed ortholog is 100%.
Bootstrap support for D3B002 as seed ortholog is 100%.

Group of orthologs #713. Best score 257 bits
Score difference with first non-orthologous sequence - A.capsulata:257 P.pallidum:49

C0NAJ6              	100.00%		D3B3C1              	100.00%
Bootstrap support for C0NAJ6 as seed ortholog is 100%.
Bootstrap support for D3B3C1 as seed ortholog is 95%.

Group of orthologs #714. Best score 257 bits
Score difference with first non-orthologous sequence - A.capsulata:257 P.pallidum:104

C0NM55              	100.00%		D3B130              	100.00%
Bootstrap support for C0NM55 as seed ortholog is 100%.
Bootstrap support for D3B130 as seed ortholog is 98%.

Group of orthologs #715. Best score 257 bits
Score difference with first non-orthologous sequence - A.capsulata:257 P.pallidum:257

C0NV14              	100.00%		D3BD59              	100.00%
Bootstrap support for C0NV14 as seed ortholog is 100%.
Bootstrap support for D3BD59 as seed ortholog is 100%.

Group of orthologs #716. Best score 256 bits
Score difference with first non-orthologous sequence - A.capsulata:64 P.pallidum:39

C0NNY9              	100.00%		D3BC33              	100.00%
                    	       		D3BUL8              	100.00%
                    	       		D3B8J3              	85.37%
                    	       		D3BFS2              	83.06%
                    	       		D3AW67              	57.72%
                    	       		D3B5I9              	19.35%
Bootstrap support for C0NNY9 as seed ortholog is 99%.
Bootstrap support for D3BC33 as seed ortholog is 98%.
Bootstrap support for D3BUL8 as seed ortholog is 98%.

Group of orthologs #717. Best score 256 bits
Score difference with first non-orthologous sequence - A.capsulata:23 P.pallidum:256

C0NA61              	100.00%		D3B224              	100.00%
Bootstrap support for C0NA61 as seed ortholog is 69%.
Alternative seed ortholog is C0NSL2 (23 bits away from this cluster)
Bootstrap support for D3B224 as seed ortholog is 100%.

Group of orthologs #718. Best score 256 bits
Score difference with first non-orthologous sequence - A.capsulata:256 P.pallidum:256

C0NDR5              	100.00%		D3BTL6              	100.00%
Bootstrap support for C0NDR5 as seed ortholog is 100%.
Bootstrap support for D3BTL6 as seed ortholog is 100%.

Group of orthologs #719. Best score 255 bits
Score difference with first non-orthologous sequence - A.capsulata:255 P.pallidum:176

C0NBS3              	100.00%		D3BAW0              	100.00%
Bootstrap support for C0NBS3 as seed ortholog is 100%.
Bootstrap support for D3BAW0 as seed ortholog is 100%.

Group of orthologs #720. Best score 255 bits
Score difference with first non-orthologous sequence - A.capsulata:255 P.pallidum:255

C0NL52              	100.00%		D3B2U7              	100.00%
Bootstrap support for C0NL52 as seed ortholog is 100%.
Bootstrap support for D3B2U7 as seed ortholog is 100%.

Group of orthologs #721. Best score 255 bits
Score difference with first non-orthologous sequence - A.capsulata:255 P.pallidum:255

C0NR31              	100.00%		D3B913              	100.00%
Bootstrap support for C0NR31 as seed ortholog is 100%.
Bootstrap support for D3B913 as seed ortholog is 100%.

Group of orthologs #722. Best score 255 bits
Score difference with first non-orthologous sequence - A.capsulata:255 P.pallidum:164

C0NIZ7              	100.00%		D3BIB6              	100.00%
Bootstrap support for C0NIZ7 as seed ortholog is 100%.
Bootstrap support for D3BIB6 as seed ortholog is 100%.

Group of orthologs #723. Best score 255 bits
Score difference with first non-orthologous sequence - A.capsulata:255 P.pallidum:107

C0NYQ3              	100.00%		D3BFQ8              	100.00%
Bootstrap support for C0NYQ3 as seed ortholog is 100%.
Bootstrap support for D3BFQ8 as seed ortholog is 99%.

Group of orthologs #724. Best score 255 bits
Score difference with first non-orthologous sequence - A.capsulata:255 P.pallidum:255

C0NWL7              	100.00%		D3BU50              	100.00%
Bootstrap support for C0NWL7 as seed ortholog is 100%.
Bootstrap support for D3BU50 as seed ortholog is 100%.

Group of orthologs #725. Best score 254 bits
Score difference with first non-orthologous sequence - A.capsulata:177 P.pallidum:198

C0NG01              	100.00%		D3B0J9              	100.00%
Bootstrap support for C0NG01 as seed ortholog is 99%.
Bootstrap support for D3B0J9 as seed ortholog is 99%.

Group of orthologs #726. Best score 254 bits
Score difference with first non-orthologous sequence - A.capsulata:203 P.pallidum:254

C0NES6              	100.00%		D3BM80              	100.00%
Bootstrap support for C0NES6 as seed ortholog is 100%.
Bootstrap support for D3BM80 as seed ortholog is 100%.

Group of orthologs #727. Best score 253 bits
Score difference with first non-orthologous sequence - A.capsulata:169 P.pallidum:135

C0ND08              	100.00%		D3B5R2              	100.00%
                    	       		D3B4A8              	38.67%
                    	       		D3B5I2              	17.13%
Bootstrap support for C0ND08 as seed ortholog is 100%.
Bootstrap support for D3B5R2 as seed ortholog is 100%.

Group of orthologs #728. Best score 253 bits
Score difference with first non-orthologous sequence - A.capsulata:253 P.pallidum:253

C0NBR5              	100.00%		D3AXH6              	100.00%
Bootstrap support for C0NBR5 as seed ortholog is 100%.
Bootstrap support for D3AXH6 as seed ortholog is 100%.

Group of orthologs #729. Best score 253 bits
Score difference with first non-orthologous sequence - A.capsulata:108 P.pallidum:35

C0P083              	100.00%		D3B0H3              	100.00%
Bootstrap support for C0P083 as seed ortholog is 99%.
Bootstrap support for D3B0H3 as seed ortholog is 91%.

Group of orthologs #730. Best score 253 bits
Score difference with first non-orthologous sequence - A.capsulata:253 P.pallidum:253

C0NBA7              	100.00%		D3BSE5              	100.00%
Bootstrap support for C0NBA7 as seed ortholog is 100%.
Bootstrap support for D3BSE5 as seed ortholog is 100%.

Group of orthologs #731. Best score 253 bits
Score difference with first non-orthologous sequence - A.capsulata:253 P.pallidum:253

C0NHH9              	100.00%		D3BMZ6              	100.00%
Bootstrap support for C0NHH9 as seed ortholog is 100%.
Bootstrap support for D3BMZ6 as seed ortholog is 100%.

Group of orthologs #732. Best score 252 bits
Score difference with first non-orthologous sequence - A.capsulata:252 P.pallidum:252

C0NF40              	100.00%		D3AYQ3              	100.00%
Bootstrap support for C0NF40 as seed ortholog is 100%.
Bootstrap support for D3AYQ3 as seed ortholog is 100%.

Group of orthologs #733. Best score 252 bits
Score difference with first non-orthologous sequence - A.capsulata:252 P.pallidum:252

C0NA27              	100.00%		D3B8D7              	100.00%
Bootstrap support for C0NA27 as seed ortholog is 100%.
Bootstrap support for D3B8D7 as seed ortholog is 100%.

Group of orthologs #734. Best score 252 bits
Score difference with first non-orthologous sequence - A.capsulata:252 P.pallidum:252

C0NTA0              	100.00%		D3BLC2              	100.00%
Bootstrap support for C0NTA0 as seed ortholog is 100%.
Bootstrap support for D3BLC2 as seed ortholog is 100%.

Group of orthologs #735. Best score 251 bits
Score difference with first non-orthologous sequence - A.capsulata:251 P.pallidum:76

C0NAM0              	100.00%		D3B433              	100.00%
C0NAM4              	19.56%		
Bootstrap support for C0NAM0 as seed ortholog is 100%.
Bootstrap support for D3B433 as seed ortholog is 82%.

Group of orthologs #736. Best score 251 bits
Score difference with first non-orthologous sequence - A.capsulata:251 P.pallidum:184

C0NG76              	100.00%		D3BFI3              	100.00%
Bootstrap support for C0NG76 as seed ortholog is 100%.
Bootstrap support for D3BFI3 as seed ortholog is 100%.

Group of orthologs #737. Best score 250 bits
Score difference with first non-orthologous sequence - A.capsulata:131 P.pallidum:112

C0NSF5              	100.00%		D3AWT6              	100.00%
Bootstrap support for C0NSF5 as seed ortholog is 99%.
Bootstrap support for D3AWT6 as seed ortholog is 98%.

Group of orthologs #738. Best score 250 bits
Score difference with first non-orthologous sequence - A.capsulata:250 P.pallidum:250

C0NSX9              	100.00%		D3B6E5              	100.00%
Bootstrap support for C0NSX9 as seed ortholog is 100%.
Bootstrap support for D3B6E5 as seed ortholog is 100%.

Group of orthologs #739. Best score 250 bits
Score difference with first non-orthologous sequence - A.capsulata:250 P.pallidum:250

C0NK94              	100.00%		D3BEV9              	100.00%
Bootstrap support for C0NK94 as seed ortholog is 100%.
Bootstrap support for D3BEV9 as seed ortholog is 100%.

Group of orthologs #740. Best score 250 bits
Score difference with first non-orthologous sequence - A.capsulata:250 P.pallidum:250

C0NUD0              	100.00%		D3BBF0              	100.00%
Bootstrap support for C0NUD0 as seed ortholog is 100%.
Bootstrap support for D3BBF0 as seed ortholog is 100%.

Group of orthologs #741. Best score 250 bits
Score difference with first non-orthologous sequence - A.capsulata:198 P.pallidum:250

C0NKW7              	100.00%		D3BRK4              	100.00%
Bootstrap support for C0NKW7 as seed ortholog is 100%.
Bootstrap support for D3BRK4 as seed ortholog is 100%.

Group of orthologs #742. Best score 249 bits
Score difference with first non-orthologous sequence - A.capsulata:130 P.pallidum:121

C0NQL2              	100.00%		D3BL52              	100.00%
Bootstrap support for C0NQL2 as seed ortholog is 99%.
Bootstrap support for D3BL52 as seed ortholog is 99%.

Group of orthologs #743. Best score 248 bits
Score difference with first non-orthologous sequence - A.capsulata:186 P.pallidum:248

C0NBA9              	100.00%		D3BF70              	100.00%
Bootstrap support for C0NBA9 as seed ortholog is 99%.
Bootstrap support for D3BF70 as seed ortholog is 100%.

Group of orthologs #744. Best score 248 bits
Score difference with first non-orthologous sequence - A.capsulata:138 P.pallidum:100

P60206              	100.00%		D3BBP5              	100.00%
Bootstrap support for P60206 as seed ortholog is 100%.
Bootstrap support for D3BBP5 as seed ortholog is 100%.

Group of orthologs #745. Best score 248 bits
Score difference with first non-orthologous sequence - A.capsulata:248 P.pallidum:248

C0NRR4              	100.00%		D3BNT3              	100.00%
Bootstrap support for C0NRR4 as seed ortholog is 100%.
Bootstrap support for D3BNT3 as seed ortholog is 100%.

Group of orthologs #746. Best score 248 bits
Score difference with first non-orthologous sequence - A.capsulata:248 P.pallidum:248

C0NYX0              	100.00%		D3BIZ7              	100.00%
Bootstrap support for C0NYX0 as seed ortholog is 100%.
Bootstrap support for D3BIZ7 as seed ortholog is 100%.

Group of orthologs #747. Best score 247 bits
Score difference with first non-orthologous sequence - A.capsulata:247 P.pallidum:247

C0NRH3              	100.00%		D3B1M6              	100.00%
Bootstrap support for C0NRH3 as seed ortholog is 100%.
Bootstrap support for D3B1M6 as seed ortholog is 100%.

Group of orthologs #748. Best score 246 bits
Score difference with first non-orthologous sequence - A.capsulata:246 P.pallidum:246

C0NMG3              	100.00%		D3BQU8              	100.00%
C0NA22              	7.11%		
Bootstrap support for C0NMG3 as seed ortholog is 100%.
Bootstrap support for D3BQU8 as seed ortholog is 100%.

Group of orthologs #749. Best score 246 bits
Score difference with first non-orthologous sequence - A.capsulata:246 P.pallidum:246

C0NPZ3              	100.00%		D3BRS8              	100.00%
                    	       		D3BGV0              	6.08%
Bootstrap support for C0NPZ3 as seed ortholog is 100%.
Bootstrap support for D3BRS8 as seed ortholog is 100%.

Group of orthologs #750. Best score 246 bits
Score difference with first non-orthologous sequence - A.capsulata:246 P.pallidum:246

C0NJD3              	100.00%		D3B0C3              	100.00%
Bootstrap support for C0NJD3 as seed ortholog is 100%.
Bootstrap support for D3B0C3 as seed ortholog is 100%.

Group of orthologs #751. Best score 246 bits
Score difference with first non-orthologous sequence - A.capsulata:122 P.pallidum:135

C0NNV7              	100.00%		D3BKR3              	100.00%
Bootstrap support for C0NNV7 as seed ortholog is 99%.
Bootstrap support for D3BKR3 as seed ortholog is 99%.

Group of orthologs #752. Best score 246 bits
Score difference with first non-orthologous sequence - A.capsulata:29 P.pallidum:163

C0NEQ9              	100.00%		D3BVF8              	100.00%
Bootstrap support for C0NEQ9 as seed ortholog is 80%.
Bootstrap support for D3BVF8 as seed ortholog is 100%.

Group of orthologs #753. Best score 246 bits
Score difference with first non-orthologous sequence - A.capsulata:179 P.pallidum:177

C0NMQ9              	100.00%		D3BR68              	100.00%
Bootstrap support for C0NMQ9 as seed ortholog is 100%.
Bootstrap support for D3BR68 as seed ortholog is 100%.

Group of orthologs #754. Best score 245 bits
Score difference with first non-orthologous sequence - A.capsulata:245 P.pallidum:245

C0NRZ8              	100.00%		D3AZM2              	100.00%
Bootstrap support for C0NRZ8 as seed ortholog is 100%.
Bootstrap support for D3AZM2 as seed ortholog is 100%.

Group of orthologs #755. Best score 245 bits
Score difference with first non-orthologous sequence - A.capsulata:188 P.pallidum:245

C0NSR3              	100.00%		D3BGE3              	100.00%
Bootstrap support for C0NSR3 as seed ortholog is 99%.
Bootstrap support for D3BGE3 as seed ortholog is 100%.

Group of orthologs #756. Best score 245 bits
Score difference with first non-orthologous sequence - A.capsulata:245 P.pallidum:245

C0NRE7              	100.00%		D3BRI8              	100.00%
Bootstrap support for C0NRE7 as seed ortholog is 100%.
Bootstrap support for D3BRI8 as seed ortholog is 100%.

Group of orthologs #757. Best score 242 bits
Score difference with first non-orthologous sequence - A.capsulata:87 P.pallidum:185

C0NXY9              	100.00%		D3B8N8              	100.00%
                    	       		D3BG57              	51.92%
                    	       		D3BV73              	39.05%
Bootstrap support for C0NXY9 as seed ortholog is 98%.
Bootstrap support for D3B8N8 as seed ortholog is 100%.

Group of orthologs #758. Best score 242 bits
Score difference with first non-orthologous sequence - A.capsulata:242 P.pallidum:242

C0NGM6              	100.00%		D3AXW1              	100.00%
Bootstrap support for C0NGM6 as seed ortholog is 100%.
Bootstrap support for D3AXW1 as seed ortholog is 100%.

Group of orthologs #759. Best score 242 bits
Score difference with first non-orthologous sequence - A.capsulata:242 P.pallidum:242

C0NSW5              	100.00%		D3AZH8              	100.00%
Bootstrap support for C0NSW5 as seed ortholog is 100%.
Bootstrap support for D3AZH8 as seed ortholog is 100%.

Group of orthologs #760. Best score 242 bits
Score difference with first non-orthologous sequence - A.capsulata:242 P.pallidum:242

C0NJ64              	100.00%		D3BJB8              	100.00%
Bootstrap support for C0NJ64 as seed ortholog is 100%.
Bootstrap support for D3BJB8 as seed ortholog is 100%.

Group of orthologs #761. Best score 242 bits
Score difference with first non-orthologous sequence - A.capsulata:242 P.pallidum:242

C0NV29              	100.00%		D3BIA4              	100.00%
Bootstrap support for C0NV29 as seed ortholog is 100%.
Bootstrap support for D3BIA4 as seed ortholog is 100%.

Group of orthologs #762. Best score 242 bits
Score difference with first non-orthologous sequence - A.capsulata:242 P.pallidum:242

C0NZX6              	100.00%		D3BHC9              	100.00%
Bootstrap support for C0NZX6 as seed ortholog is 100%.
Bootstrap support for D3BHC9 as seed ortholog is 100%.

Group of orthologs #763. Best score 241 bits
Score difference with first non-orthologous sequence - A.capsulata:241 P.pallidum:241

C0NBK9              	100.00%		D3AX31              	100.00%
Bootstrap support for C0NBK9 as seed ortholog is 100%.
Bootstrap support for D3AX31 as seed ortholog is 100%.

Group of orthologs #764. Best score 241 bits
Score difference with first non-orthologous sequence - A.capsulata:65 P.pallidum:11

C0NNU9              	100.00%		D3BJI2              	100.00%
Bootstrap support for C0NNU9 as seed ortholog is 82%.
Bootstrap support for D3BJI2 as seed ortholog is 67%.
Alternative seed ortholog is D3BR78 (11 bits away from this cluster)

Group of orthologs #765. Best score 240 bits
Score difference with first non-orthologous sequence - A.capsulata:240 P.pallidum:240

C0NJ73              	100.00%		D3BV94              	100.00%
                    	       		D3BVB3              	47.60%
                    	       		D3BVB6              	40.42%
Bootstrap support for C0NJ73 as seed ortholog is 100%.
Bootstrap support for D3BV94 as seed ortholog is 100%.

Group of orthologs #766. Best score 240 bits
Score difference with first non-orthologous sequence - A.capsulata:240 P.pallidum:19

C0NB71              	100.00%		D3BDA2              	100.00%
Bootstrap support for C0NB71 as seed ortholog is 100%.
Bootstrap support for D3BDA2 as seed ortholog is 65%.
Alternative seed ortholog is D3BLC1 (19 bits away from this cluster)

Group of orthologs #767. Best score 240 bits
Score difference with first non-orthologous sequence - A.capsulata:25 P.pallidum:36

C0NPQ3              	100.00%		D3B3T9              	100.00%
Bootstrap support for C0NPQ3 as seed ortholog is 88%.
Bootstrap support for D3B3T9 as seed ortholog is 95%.

Group of orthologs #768. Best score 240 bits
Score difference with first non-orthologous sequence - A.capsulata:240 P.pallidum:240

C0NKI2              	100.00%		D3BAC7              	100.00%
Bootstrap support for C0NKI2 as seed ortholog is 100%.
Bootstrap support for D3BAC7 as seed ortholog is 100%.

Group of orthologs #769. Best score 240 bits
Score difference with first non-orthologous sequence - A.capsulata:240 P.pallidum:45

C0NPX3              	100.00%		D3B7W6              	100.00%
Bootstrap support for C0NPX3 as seed ortholog is 100%.
Bootstrap support for D3B7W6 as seed ortholog is 71%.
Alternative seed ortholog is D3B083 (45 bits away from this cluster)

Group of orthologs #770. Best score 240 bits
Score difference with first non-orthologous sequence - A.capsulata:240 P.pallidum:240

C0NED7              	100.00%		D3BIM4              	100.00%
Bootstrap support for C0NED7 as seed ortholog is 100%.
Bootstrap support for D3BIM4 as seed ortholog is 100%.

Group of orthologs #771. Best score 240 bits
Score difference with first non-orthologous sequence - A.capsulata:240 P.pallidum:240

C0NAG5              	100.00%		D3BTV2              	100.00%
Bootstrap support for C0NAG5 as seed ortholog is 100%.
Bootstrap support for D3BTV2 as seed ortholog is 100%.

Group of orthologs #772. Best score 240 bits
Score difference with first non-orthologous sequence - A.capsulata:32 P.pallidum:33

C0NM69              	100.00%		D3BLH2              	100.00%
Bootstrap support for C0NM69 as seed ortholog is 90%.
Bootstrap support for D3BLH2 as seed ortholog is 71%.
Alternative seed ortholog is D3BAN3 (33 bits away from this cluster)

Group of orthologs #773. Best score 240 bits
Score difference with first non-orthologous sequence - A.capsulata:240 P.pallidum:240

C0NLR5              	100.00%		D3BMH8              	100.00%
Bootstrap support for C0NLR5 as seed ortholog is 100%.
Bootstrap support for D3BMH8 as seed ortholog is 100%.

Group of orthologs #774. Best score 240 bits
Score difference with first non-orthologous sequence - A.capsulata:240 P.pallidum:240

C0P0F6              	100.00%		D3BEH6              	100.00%
Bootstrap support for C0P0F6 as seed ortholog is 100%.
Bootstrap support for D3BEH6 as seed ortholog is 100%.

Group of orthologs #775. Best score 239 bits
Score difference with first non-orthologous sequence - A.capsulata:118 P.pallidum:69

C0NGR4              	100.00%		D3BGZ5              	100.00%
                    	       		D3BKT2              	13.40%
Bootstrap support for C0NGR4 as seed ortholog is 99%.
Bootstrap support for D3BGZ5 as seed ortholog is 98%.

Group of orthologs #776. Best score 239 bits
Score difference with first non-orthologous sequence - A.capsulata:239 P.pallidum:239

C0NBM2              	100.00%		D3BF07              	100.00%
Bootstrap support for C0NBM2 as seed ortholog is 100%.
Bootstrap support for D3BF07 as seed ortholog is 100%.

Group of orthologs #777. Best score 239 bits
Score difference with first non-orthologous sequence - A.capsulata:239 P.pallidum:239

C0NR06              	100.00%		D3B9J0              	100.00%
Bootstrap support for C0NR06 as seed ortholog is 100%.
Bootstrap support for D3B9J0 as seed ortholog is 100%.

Group of orthologs #778. Best score 238 bits
Score difference with first non-orthologous sequence - A.capsulata:33 P.pallidum:238

C0NCM5              	100.00%		D3AZF2              	100.00%
C0NP32              	12.31%		
C0NQE5              	9.98%		
Bootstrap support for C0NCM5 as seed ortholog is 88%.
Bootstrap support for D3AZF2 as seed ortholog is 100%.

Group of orthologs #779. Best score 238 bits
Score difference with first non-orthologous sequence - A.capsulata:238 P.pallidum:189

C0NDK7              	100.00%		D3AZG7              	100.00%
Bootstrap support for C0NDK7 as seed ortholog is 100%.
Bootstrap support for D3AZG7 as seed ortholog is 99%.

Group of orthologs #780. Best score 238 bits
Score difference with first non-orthologous sequence - A.capsulata:139 P.pallidum:156

C0NII1              	100.00%		D3AYR4              	100.00%
Bootstrap support for C0NII1 as seed ortholog is 99%.
Bootstrap support for D3AYR4 as seed ortholog is 99%.

Group of orthologs #781. Best score 238 bits
Score difference with first non-orthologous sequence - A.capsulata:238 P.pallidum:238

C0NPN9              	100.00%		D3AXN2              	100.00%
Bootstrap support for C0NPN9 as seed ortholog is 100%.
Bootstrap support for D3AXN2 as seed ortholog is 100%.

Group of orthologs #782. Best score 238 bits
Score difference with first non-orthologous sequence - A.capsulata:157 P.pallidum:117

C0NKW4              	100.00%		D3B5M6              	100.00%
Bootstrap support for C0NKW4 as seed ortholog is 99%.
Bootstrap support for D3B5M6 as seed ortholog is 99%.

Group of orthologs #783. Best score 238 bits
Score difference with first non-orthologous sequence - A.capsulata:238 P.pallidum:238

C0NGG2              	100.00%		D3BDT2              	100.00%
Bootstrap support for C0NGG2 as seed ortholog is 100%.
Bootstrap support for D3BDT2 as seed ortholog is 100%.

Group of orthologs #784. Best score 238 bits
Score difference with first non-orthologous sequence - A.capsulata:238 P.pallidum:238

C0NBJ3              	100.00%		D3BL94              	100.00%
Bootstrap support for C0NBJ3 as seed ortholog is 100%.
Bootstrap support for D3BL94 as seed ortholog is 100%.

Group of orthologs #785. Best score 238 bits
Score difference with first non-orthologous sequence - A.capsulata:238 P.pallidum:238

C0ND37              	100.00%		D3BLR1              	100.00%
Bootstrap support for C0ND37 as seed ortholog is 100%.
Bootstrap support for D3BLR1 as seed ortholog is 100%.

Group of orthologs #786. Best score 238 bits
Score difference with first non-orthologous sequence - A.capsulata:238 P.pallidum:238

C0NHN7              	100.00%		D3BPT5              	100.00%
Bootstrap support for C0NHN7 as seed ortholog is 100%.
Bootstrap support for D3BPT5 as seed ortholog is 100%.

Group of orthologs #787. Best score 238 bits
Score difference with first non-orthologous sequence - A.capsulata:238 P.pallidum:238

C0NVZ9              	100.00%		D3BCX8              	100.00%
Bootstrap support for C0NVZ9 as seed ortholog is 100%.
Bootstrap support for D3BCX8 as seed ortholog is 100%.

Group of orthologs #788. Best score 237 bits
Score difference with first non-orthologous sequence - A.capsulata:141 P.pallidum:237

C0NF14              	100.00%		D3B2R6              	100.00%
Bootstrap support for C0NF14 as seed ortholog is 99%.
Bootstrap support for D3B2R6 as seed ortholog is 100%.

Group of orthologs #789. Best score 237 bits
Score difference with first non-orthologous sequence - A.capsulata:237 P.pallidum:237

C0NG42              	100.00%		D3BIF2              	100.00%
Bootstrap support for C0NG42 as seed ortholog is 100%.
Bootstrap support for D3BIF2 as seed ortholog is 100%.

Group of orthologs #790. Best score 237 bits
Score difference with first non-orthologous sequence - A.capsulata:237 P.pallidum:237

C0NZQ5              	100.00%		D3B544              	100.00%
Bootstrap support for C0NZQ5 as seed ortholog is 100%.
Bootstrap support for D3B544 as seed ortholog is 100%.

Group of orthologs #791. Best score 237 bits
Score difference with first non-orthologous sequence - A.capsulata:237 P.pallidum:237

C0NKX3              	100.00%		D3BQN8              	100.00%
Bootstrap support for C0NKX3 as seed ortholog is 100%.
Bootstrap support for D3BQN8 as seed ortholog is 100%.

Group of orthologs #792. Best score 236 bits
Score difference with first non-orthologous sequence - A.capsulata:236 P.pallidum:236

C0NIE1              	100.00%		D3BEU0              	100.00%
Bootstrap support for C0NIE1 as seed ortholog is 100%.
Bootstrap support for D3BEU0 as seed ortholog is 100%.

Group of orthologs #793. Best score 236 bits
Score difference with first non-orthologous sequence - A.capsulata:236 P.pallidum:236

C0NNT2              	100.00%		D3BI43              	100.00%
Bootstrap support for C0NNT2 as seed ortholog is 100%.
Bootstrap support for D3BI43 as seed ortholog is 100%.

Group of orthologs #794. Best score 236 bits
Score difference with first non-orthologous sequence - A.capsulata:150 P.pallidum:122

C0NXA2              	100.00%		D3BH32              	100.00%
Bootstrap support for C0NXA2 as seed ortholog is 99%.
Bootstrap support for D3BH32 as seed ortholog is 99%.

Group of orthologs #795. Best score 236 bits
Score difference with first non-orthologous sequence - A.capsulata:236 P.pallidum:236

C0NTF1              	100.00%		D3BT21              	100.00%
Bootstrap support for C0NTF1 as seed ortholog is 100%.
Bootstrap support for D3BT21 as seed ortholog is 100%.

Group of orthologs #796. Best score 235 bits
Score difference with first non-orthologous sequence - A.capsulata:235 P.pallidum:53

C0NAE6              	100.00%		D3AYC5              	100.00%
Bootstrap support for C0NAE6 as seed ortholog is 100%.
Bootstrap support for D3AYC5 as seed ortholog is 97%.

Group of orthologs #797. Best score 235 bits
Score difference with first non-orthologous sequence - A.capsulata:133 P.pallidum:140

C0NC86              	100.00%		D3AXX6              	100.00%
Bootstrap support for C0NC86 as seed ortholog is 99%.
Bootstrap support for D3AXX6 as seed ortholog is 99%.

Group of orthologs #798. Best score 235 bits
Score difference with first non-orthologous sequence - A.capsulata:235 P.pallidum:169

C0NCC8              	100.00%		D3B763              	100.00%
Bootstrap support for C0NCC8 as seed ortholog is 100%.
Bootstrap support for D3B763 as seed ortholog is 100%.

Group of orthologs #799. Best score 235 bits
Score difference with first non-orthologous sequence - A.capsulata:113 P.pallidum:160

C0NAN9              	100.00%		D3BHB8              	100.00%
Bootstrap support for C0NAN9 as seed ortholog is 99%.
Bootstrap support for D3BHB8 as seed ortholog is 100%.

Group of orthologs #800. Best score 235 bits
Score difference with first non-orthologous sequence - A.capsulata:235 P.pallidum:235

C0NX47              	100.00%		D3B1K3              	100.00%
Bootstrap support for C0NX47 as seed ortholog is 100%.
Bootstrap support for D3B1K3 as seed ortholog is 100%.

Group of orthologs #801. Best score 235 bits
Score difference with first non-orthologous sequence - A.capsulata:235 P.pallidum:235

C0NYN6              	100.00%		D3B7P9              	100.00%
Bootstrap support for C0NYN6 as seed ortholog is 100%.
Bootstrap support for D3B7P9 as seed ortholog is 100%.

Group of orthologs #802. Best score 235 bits
Score difference with first non-orthologous sequence - A.capsulata:235 P.pallidum:235

C0NNS9              	100.00%		D3BV59              	100.00%
Bootstrap support for C0NNS9 as seed ortholog is 100%.
Bootstrap support for D3BV59 as seed ortholog is 100%.

Group of orthologs #803. Best score 234 bits
Score difference with first non-orthologous sequence - A.capsulata:234 P.pallidum:234

C0NCY2              	100.00%		D3AWD3              	100.00%
Bootstrap support for C0NCY2 as seed ortholog is 100%.
Bootstrap support for D3AWD3 as seed ortholog is 100%.

Group of orthologs #804. Best score 234 bits
Score difference with first non-orthologous sequence - A.capsulata:234 P.pallidum:234

C0NAF8              	100.00%		D3BI88              	100.00%
Bootstrap support for C0NAF8 as seed ortholog is 100%.
Bootstrap support for D3BI88 as seed ortholog is 100%.

Group of orthologs #805. Best score 233 bits
Score difference with first non-orthologous sequence - A.capsulata:233 P.pallidum:233

C0NEA5              	100.00%		D3B0J0              	100.00%
Bootstrap support for C0NEA5 as seed ortholog is 100%.
Bootstrap support for D3B0J0 as seed ortholog is 100%.

Group of orthologs #806. Best score 233 bits
Score difference with first non-orthologous sequence - A.capsulata:233 P.pallidum:233

C0NCQ8              	100.00%		D3BDT3              	100.00%
Bootstrap support for C0NCQ8 as seed ortholog is 100%.
Bootstrap support for D3BDT3 as seed ortholog is 100%.

Group of orthologs #807. Best score 232 bits
Score difference with first non-orthologous sequence - A.capsulata:232 P.pallidum:232

C0NAL6              	100.00%		D3B1R4              	100.00%
Bootstrap support for C0NAL6 as seed ortholog is 100%.
Bootstrap support for D3B1R4 as seed ortholog is 100%.

Group of orthologs #808. Best score 232 bits
Score difference with first non-orthologous sequence - A.capsulata:232 P.pallidum:232

C0NNF5              	100.00%		D3B0K6              	100.00%
Bootstrap support for C0NNF5 as seed ortholog is 100%.
Bootstrap support for D3B0K6 as seed ortholog is 100%.

Group of orthologs #809. Best score 232 bits
Score difference with first non-orthologous sequence - A.capsulata:232 P.pallidum:232

C0NAX9              	100.00%		D3BIT1              	100.00%
Bootstrap support for C0NAX9 as seed ortholog is 100%.
Bootstrap support for D3BIT1 as seed ortholog is 100%.

Group of orthologs #810. Best score 232 bits
Score difference with first non-orthologous sequence - A.capsulata:22 P.pallidum:232

C0NQR5              	100.00%		D3BA97              	100.00%
Bootstrap support for C0NQR5 as seed ortholog is 61%.
Alternative seed ortholog is C0NCA2 (22 bits away from this cluster)
Bootstrap support for D3BA97 as seed ortholog is 100%.

Group of orthologs #811. Best score 231 bits
Score difference with first non-orthologous sequence - A.capsulata:158 P.pallidum:18

C0NFE5              	100.00%		D3B388              	100.00%
Bootstrap support for C0NFE5 as seed ortholog is 100%.
Bootstrap support for D3B388 as seed ortholog is 68%.
Alternative seed ortholog is D3AYB9 (18 bits away from this cluster)

Group of orthologs #812. Best score 230 bits
Score difference with first non-orthologous sequence - A.capsulata:104 P.pallidum:48

C0NWR3              	100.00%		D3B128              	100.00%
Bootstrap support for C0NWR3 as seed ortholog is 99%.
Bootstrap support for D3B128 as seed ortholog is 49%.
Alternative seed ortholog is D3B9N2 (48 bits away from this cluster)

Group of orthologs #813. Best score 230 bits
Score difference with first non-orthologous sequence - A.capsulata:230 P.pallidum:60

C0NGA1              	100.00%		D3BJU2              	100.00%
Bootstrap support for C0NGA1 as seed ortholog is 100%.
Bootstrap support for D3BJU2 as seed ortholog is 85%.

Group of orthologs #814. Best score 229 bits
Score difference with first non-orthologous sequence - A.capsulata:229 P.pallidum:229

C0NDE1              	100.00%		D3B770              	100.00%
Bootstrap support for C0NDE1 as seed ortholog is 100%.
Bootstrap support for D3B770 as seed ortholog is 100%.

Group of orthologs #815. Best score 229 bits
Score difference with first non-orthologous sequence - A.capsulata:91 P.pallidum:64

C0NMF5              	100.00%		D3B3V9              	100.00%
Bootstrap support for C0NMF5 as seed ortholog is 97%.
Bootstrap support for D3B3V9 as seed ortholog is 94%.

Group of orthologs #816. Best score 228 bits
Score difference with first non-orthologous sequence - A.capsulata:25 P.pallidum:51

C0NF83              	100.00%		D3BG32              	100.00%
C0NVF3              	52.41%		
Bootstrap support for C0NF83 as seed ortholog is 67%.
Alternative seed ortholog is C0NXK5 (25 bits away from this cluster)
Bootstrap support for D3BG32 as seed ortholog is 88%.

Group of orthologs #817. Best score 228 bits
Score difference with first non-orthologous sequence - A.capsulata:228 P.pallidum:228

C0NEZ0              	100.00%		D3B9M6              	100.00%
Bootstrap support for C0NEZ0 as seed ortholog is 100%.
Bootstrap support for D3B9M6 as seed ortholog is 100%.

Group of orthologs #818. Best score 228 bits
Score difference with first non-orthologous sequence - A.capsulata:228 P.pallidum:228

C0NDU6              	100.00%		D3BIG5              	100.00%
Bootstrap support for C0NDU6 as seed ortholog is 100%.
Bootstrap support for D3BIG5 as seed ortholog is 100%.

Group of orthologs #819. Best score 228 bits
Score difference with first non-orthologous sequence - A.capsulata:228 P.pallidum:228

C0NPL7              	100.00%		D3BND0              	100.00%
Bootstrap support for C0NPL7 as seed ortholog is 100%.
Bootstrap support for D3BND0 as seed ortholog is 100%.

Group of orthologs #820. Best score 228 bits
Score difference with first non-orthologous sequence - A.capsulata:137 P.pallidum:78

C0NYW6              	100.00%		D3BIK0              	100.00%
Bootstrap support for C0NYW6 as seed ortholog is 99%.
Bootstrap support for D3BIK0 as seed ortholog is 99%.

Group of orthologs #821. Best score 227 bits
Score difference with first non-orthologous sequence - A.capsulata:227 P.pallidum:227

C0NEF9              	100.00%		D3BME1              	100.00%
                    	       		D3BDR3              	20.66%
Bootstrap support for C0NEF9 as seed ortholog is 100%.
Bootstrap support for D3BME1 as seed ortholog is 100%.

Group of orthologs #822. Best score 227 bits
Score difference with first non-orthologous sequence - A.capsulata:227 P.pallidum:227

C0NBU6              	100.00%		D3B6X6              	100.00%
Bootstrap support for C0NBU6 as seed ortholog is 100%.
Bootstrap support for D3B6X6 as seed ortholog is 100%.

Group of orthologs #823. Best score 227 bits
Score difference with first non-orthologous sequence - A.capsulata:227 P.pallidum:227

C0NT74              	100.00%		D3AWK3              	100.00%
Bootstrap support for C0NT74 as seed ortholog is 100%.
Bootstrap support for D3AWK3 as seed ortholog is 100%.

Group of orthologs #824. Best score 227 bits
Score difference with first non-orthologous sequence - A.capsulata:123 P.pallidum:85

C0NPD2              	100.00%		D3BR25              	100.00%
Bootstrap support for C0NPD2 as seed ortholog is 98%.
Bootstrap support for D3BR25 as seed ortholog is 76%.

Group of orthologs #825. Best score 226 bits
Score difference with first non-orthologous sequence - A.capsulata:226 P.pallidum:226

C0NJV8              	100.00%		D3BCD7              	100.00%
Bootstrap support for C0NJV8 as seed ortholog is 100%.
Bootstrap support for D3BCD7 as seed ortholog is 100%.

Group of orthologs #826. Best score 226 bits
Score difference with first non-orthologous sequence - A.capsulata:226 P.pallidum:226

C0NRI1              	100.00%		D3BJ37              	100.00%
Bootstrap support for C0NRI1 as seed ortholog is 100%.
Bootstrap support for D3BJ37 as seed ortholog is 100%.

Group of orthologs #827. Best score 226 bits
Score difference with first non-orthologous sequence - A.capsulata:226 P.pallidum:226

C0NR38              	100.00%		D3BK79              	100.00%
Bootstrap support for C0NR38 as seed ortholog is 100%.
Bootstrap support for D3BK79 as seed ortholog is 100%.

Group of orthologs #828. Best score 226 bits
Score difference with first non-orthologous sequence - A.capsulata:226 P.pallidum:81

C0NZL9              	100.00%		D3BFN8              	100.00%
Bootstrap support for C0NZL9 as seed ortholog is 100%.
Bootstrap support for D3BFN8 as seed ortholog is 98%.

Group of orthologs #829. Best score 225 bits
Score difference with first non-orthologous sequence - A.capsulata:60 P.pallidum:225

C0NSU2              	100.00%		D3B3L6              	100.00%
                    	       		D3BKX9              	38.36%
                    	       		D3B3L7              	35.77%
                    	       		D3B4G1              	14.96%
                    	       		D3BUJ2              	9.22%
Bootstrap support for C0NSU2 as seed ortholog is 89%.
Bootstrap support for D3B3L6 as seed ortholog is 100%.

Group of orthologs #830. Best score 225 bits
Score difference with first non-orthologous sequence - A.capsulata:225 P.pallidum:225

C0NIC6              	100.00%		D3AZH4              	100.00%
Bootstrap support for C0NIC6 as seed ortholog is 100%.
Bootstrap support for D3AZH4 as seed ortholog is 100%.

Group of orthologs #831. Best score 225 bits
Score difference with first non-orthologous sequence - A.capsulata:225 P.pallidum:225

C0NF90              	100.00%		D3B6G3              	100.00%
Bootstrap support for C0NF90 as seed ortholog is 100%.
Bootstrap support for D3B6G3 as seed ortholog is 100%.

Group of orthologs #832. Best score 225 bits
Score difference with first non-orthologous sequence - A.capsulata:225 P.pallidum:225

C0NAV4              	100.00%		D3BEY3              	100.00%
Bootstrap support for C0NAV4 as seed ortholog is 100%.
Bootstrap support for D3BEY3 as seed ortholog is 100%.

Group of orthologs #833. Best score 224 bits
Score difference with first non-orthologous sequence - A.capsulata:224 P.pallidum:224

C0NC52              	100.00%		D3BE39              	100.00%
Bootstrap support for C0NC52 as seed ortholog is 100%.
Bootstrap support for D3BE39 as seed ortholog is 100%.

Group of orthologs #834. Best score 224 bits
Score difference with first non-orthologous sequence - A.capsulata:224 P.pallidum:224

C0NW31              	100.00%		D3AWH8              	100.00%
Bootstrap support for C0NW31 as seed ortholog is 100%.
Bootstrap support for D3AWH8 as seed ortholog is 100%.

Group of orthologs #835. Best score 224 bits
Score difference with first non-orthologous sequence - A.capsulata:224 P.pallidum:224

C0NM26              	100.00%		D3B6Y2              	100.00%
Bootstrap support for C0NM26 as seed ortholog is 100%.
Bootstrap support for D3B6Y2 as seed ortholog is 100%.

Group of orthologs #836. Best score 224 bits
Score difference with first non-orthologous sequence - A.capsulata:224 P.pallidum:224

C0NJN5              	100.00%		D3BSQ9              	100.00%
Bootstrap support for C0NJN5 as seed ortholog is 100%.
Bootstrap support for D3BSQ9 as seed ortholog is 100%.

Group of orthologs #837. Best score 223 bits
Score difference with first non-orthologous sequence - A.capsulata:223 P.pallidum:169

C0NAW2              	100.00%		D3BT42              	100.00%
                    	       		D3BT43              	85.83%
Bootstrap support for C0NAW2 as seed ortholog is 100%.
Bootstrap support for D3BT42 as seed ortholog is 99%.

Group of orthologs #838. Best score 223 bits
Score difference with first non-orthologous sequence - A.capsulata:223 P.pallidum:223

C0NAG0              	100.00%		D3B6T4              	100.00%
Bootstrap support for C0NAG0 as seed ortholog is 100%.
Bootstrap support for D3B6T4 as seed ortholog is 100%.

Group of orthologs #839. Best score 223 bits
Score difference with first non-orthologous sequence - A.capsulata:174 P.pallidum:223

C0NFC4              	100.00%		D3B3S8              	100.00%
Bootstrap support for C0NFC4 as seed ortholog is 100%.
Bootstrap support for D3B3S8 as seed ortholog is 100%.

Group of orthologs #840. Best score 223 bits
Score difference with first non-orthologous sequence - A.capsulata:76 P.pallidum:125

C0NHR9              	100.00%		D3BAQ8              	100.00%
Bootstrap support for C0NHR9 as seed ortholog is 99%.
Bootstrap support for D3BAQ8 as seed ortholog is 99%.

Group of orthologs #841. Best score 223 bits
Score difference with first non-orthologous sequence - A.capsulata:223 P.pallidum:223

C0NH80              	100.00%		D3BBM0              	100.00%
Bootstrap support for C0NH80 as seed ortholog is 100%.
Bootstrap support for D3BBM0 as seed ortholog is 100%.

Group of orthologs #842. Best score 223 bits
Score difference with first non-orthologous sequence - A.capsulata:223 P.pallidum:223

C0NC17              	100.00%		D3BKL1              	100.00%
Bootstrap support for C0NC17 as seed ortholog is 100%.
Bootstrap support for D3BKL1 as seed ortholog is 100%.

Group of orthologs #843. Best score 223 bits
Score difference with first non-orthologous sequence - A.capsulata:223 P.pallidum:223

C0P1A0              	100.00%		D3AY60              	100.00%
Bootstrap support for C0P1A0 as seed ortholog is 100%.
Bootstrap support for D3AY60 as seed ortholog is 100%.

Group of orthologs #844. Best score 223 bits
Score difference with first non-orthologous sequence - A.capsulata:223 P.pallidum:37

C0NKL7              	100.00%		D3BGH1              	100.00%
Bootstrap support for C0NKL7 as seed ortholog is 100%.
Bootstrap support for D3BGH1 as seed ortholog is 92%.

Group of orthologs #845. Best score 222 bits
Score difference with first non-orthologous sequence - A.capsulata:222 P.pallidum:222

C0NAI3              	100.00%		D3B0K1              	100.00%
Bootstrap support for C0NAI3 as seed ortholog is 100%.
Bootstrap support for D3B0K1 as seed ortholog is 100%.

Group of orthologs #846. Best score 222 bits
Score difference with first non-orthologous sequence - A.capsulata:222 P.pallidum:222

C0NEN5              	100.00%		D3AXS4              	100.00%
Bootstrap support for C0NEN5 as seed ortholog is 100%.
Bootstrap support for D3AXS4 as seed ortholog is 100%.

Group of orthologs #847. Best score 222 bits
Score difference with first non-orthologous sequence - A.capsulata:222 P.pallidum:222

C0NNW0              	100.00%		D3B2K3              	100.00%
Bootstrap support for C0NNW0 as seed ortholog is 100%.
Bootstrap support for D3B2K3 as seed ortholog is 100%.

Group of orthologs #848. Best score 222 bits
Score difference with first non-orthologous sequence - A.capsulata:222 P.pallidum:222

C0NFR7              	100.00%		D3BCA4              	100.00%
Bootstrap support for C0NFR7 as seed ortholog is 100%.
Bootstrap support for D3BCA4 as seed ortholog is 100%.

Group of orthologs #849. Best score 221 bits
Score difference with first non-orthologous sequence - A.capsulata:221 P.pallidum:221

C0NXN8              	100.00%		D3B5G1              	100.00%
                    	       		D3BB79              	19.97%
Bootstrap support for C0NXN8 as seed ortholog is 100%.
Bootstrap support for D3B5G1 as seed ortholog is 100%.

Group of orthologs #850. Best score 221 bits
Score difference with first non-orthologous sequence - A.capsulata:48 P.pallidum:50

C0P0H3              	100.00%		D3BH94              	100.00%
Bootstrap support for C0P0H3 as seed ortholog is 99%.
Bootstrap support for D3BH94 as seed ortholog is 99%.

Group of orthologs #851. Best score 220 bits
Score difference with first non-orthologous sequence - A.capsulata:220 P.pallidum:124

C0NFP3              	100.00%		D3B9J8              	100.00%
Bootstrap support for C0NFP3 as seed ortholog is 100%.
Bootstrap support for D3B9J8 as seed ortholog is 99%.

Group of orthologs #852. Best score 220 bits
Score difference with first non-orthologous sequence - A.capsulata:220 P.pallidum:220

C0NJL3              	100.00%		D3BEI1              	100.00%
Bootstrap support for C0NJL3 as seed ortholog is 100%.
Bootstrap support for D3BEI1 as seed ortholog is 100%.

Group of orthologs #853. Best score 220 bits
Score difference with first non-orthologous sequence - A.capsulata:220 P.pallidum:220

C0NVE4              	100.00%		D3B615              	100.00%
Bootstrap support for C0NVE4 as seed ortholog is 100%.
Bootstrap support for D3B615 as seed ortholog is 100%.

Group of orthologs #854. Best score 220 bits
Score difference with first non-orthologous sequence - A.capsulata:220 P.pallidum:220

C0NXB9              	100.00%		D3B6T5              	100.00%
Bootstrap support for C0NXB9 as seed ortholog is 100%.
Bootstrap support for D3B6T5 as seed ortholog is 100%.

Group of orthologs #855. Best score 220 bits
Score difference with first non-orthologous sequence - A.capsulata:65 P.pallidum:75

C0NUK0              	100.00%		D3BBG2              	100.00%
Bootstrap support for C0NUK0 as seed ortholog is 99%.
Bootstrap support for D3BBG2 as seed ortholog is 99%.

Group of orthologs #856. Best score 220 bits
Score difference with first non-orthologous sequence - A.capsulata:220 P.pallidum:220

C0NUW4              	100.00%		D3BEC7              	100.00%
Bootstrap support for C0NUW4 as seed ortholog is 100%.
Bootstrap support for D3BEC7 as seed ortholog is 100%.

Group of orthologs #857. Best score 220 bits
Score difference with first non-orthologous sequence - A.capsulata:220 P.pallidum:8

C0NSF8              	100.00%		D3BPW2              	100.00%
Bootstrap support for C0NSF8 as seed ortholog is 100%.
Bootstrap support for D3BPW2 as seed ortholog is 57%.
Alternative seed ortholog is D3BQ83 (8 bits away from this cluster)

Group of orthologs #858. Best score 219 bits
Score difference with first non-orthologous sequence - A.capsulata:219 P.pallidum:219

C0NIF0              	100.00%		D3BP59              	100.00%
C0NF18              	13.91%		
Bootstrap support for C0NIF0 as seed ortholog is 100%.
Bootstrap support for D3BP59 as seed ortholog is 100%.

Group of orthologs #859. Best score 219 bits
Score difference with first non-orthologous sequence - A.capsulata:219 P.pallidum:219

C0NP71              	100.00%		D3B367              	100.00%
Bootstrap support for C0NP71 as seed ortholog is 100%.
Bootstrap support for D3B367 as seed ortholog is 100%.

Group of orthologs #860. Best score 219 bits
Score difference with first non-orthologous sequence - A.capsulata:219 P.pallidum:219

C0NG66              	100.00%		D3BPI1              	100.00%
Bootstrap support for C0NG66 as seed ortholog is 100%.
Bootstrap support for D3BPI1 as seed ortholog is 100%.

Group of orthologs #861. Best score 219 bits
Score difference with first non-orthologous sequence - A.capsulata:36 P.pallidum:51

C0NV46              	100.00%		D3BAM4              	100.00%
Bootstrap support for C0NV46 as seed ortholog is 75%.
Bootstrap support for D3BAM4 as seed ortholog is 83%.

Group of orthologs #862. Best score 219 bits
Score difference with first non-orthologous sequence - A.capsulata:47 P.pallidum:79

C0NJR1              	100.00%		D3BU03              	100.00%
Bootstrap support for C0NJR1 as seed ortholog is 93%.
Bootstrap support for D3BU03 as seed ortholog is 99%.

Group of orthologs #863. Best score 218 bits
Score difference with first non-orthologous sequence - A.capsulata:218 P.pallidum:218

C0NBU7              	100.00%		D3B6B2              	100.00%
Bootstrap support for C0NBU7 as seed ortholog is 100%.
Bootstrap support for D3B6B2 as seed ortholog is 100%.

Group of orthologs #864. Best score 218 bits
Score difference with first non-orthologous sequence - A.capsulata:110 P.pallidum:41

C0NWY7              	100.00%		D3B0N1              	100.00%
Bootstrap support for C0NWY7 as seed ortholog is 100%.
Bootstrap support for D3B0N1 as seed ortholog is 98%.

Group of orthologs #865. Best score 218 bits
Score difference with first non-orthologous sequence - A.capsulata:218 P.pallidum:218

C0NLD2              	100.00%		D3BF12              	100.00%
Bootstrap support for C0NLD2 as seed ortholog is 100%.
Bootstrap support for D3BF12 as seed ortholog is 100%.

Group of orthologs #866. Best score 217 bits
Score difference with first non-orthologous sequence - A.capsulata:217 P.pallidum:98

C0NIS9              	100.00%		D3B972              	100.00%
Bootstrap support for C0NIS9 as seed ortholog is 100%.
Bootstrap support for D3B972 as seed ortholog is 99%.

Group of orthologs #867. Best score 217 bits
Score difference with first non-orthologous sequence - A.capsulata:217 P.pallidum:217

C0NHK6              	100.00%		D3BHV4              	100.00%
Bootstrap support for C0NHK6 as seed ortholog is 100%.
Bootstrap support for D3BHV4 as seed ortholog is 100%.

Group of orthologs #868. Best score 217 bits
Score difference with first non-orthologous sequence - A.capsulata:217 P.pallidum:51

C0NBB3              	100.00%		D3BQE6              	100.00%
Bootstrap support for C0NBB3 as seed ortholog is 100%.
Bootstrap support for D3BQE6 as seed ortholog is 95%.

Group of orthologs #869. Best score 217 bits
Score difference with first non-orthologous sequence - A.capsulata:217 P.pallidum:217

C0NCN6              	100.00%		D3BVI2              	100.00%
Bootstrap support for C0NCN6 as seed ortholog is 100%.
Bootstrap support for D3BVI2 as seed ortholog is 100%.

Group of orthologs #870. Best score 217 bits
Score difference with first non-orthologous sequence - A.capsulata:217 P.pallidum:217

C0NL99              	100.00%		D3BMQ0              	100.00%
Bootstrap support for C0NL99 as seed ortholog is 100%.
Bootstrap support for D3BMQ0 as seed ortholog is 100%.

Group of orthologs #871. Best score 217 bits
Score difference with first non-orthologous sequence - A.capsulata:217 P.pallidum:217

C0NST9              	100.00%		D3BK61              	100.00%
Bootstrap support for C0NST9 as seed ortholog is 100%.
Bootstrap support for D3BK61 as seed ortholog is 100%.

Group of orthologs #872. Best score 216 bits
Score difference with first non-orthologous sequence - A.capsulata:132 P.pallidum:216

C0NJK6              	100.00%		D3AX20              	100.00%
Bootstrap support for C0NJK6 as seed ortholog is 99%.
Bootstrap support for D3AX20 as seed ortholog is 100%.

Group of orthologs #873. Best score 216 bits
Score difference with first non-orthologous sequence - A.capsulata:216 P.pallidum:216

C0NIA1              	100.00%		D3B5T9              	100.00%
Bootstrap support for C0NIA1 as seed ortholog is 100%.
Bootstrap support for D3B5T9 as seed ortholog is 100%.

Group of orthologs #874. Best score 216 bits
Score difference with first non-orthologous sequence - A.capsulata:216 P.pallidum:216

C0P1B9              	100.00%		D3AWL9              	100.00%
Bootstrap support for C0P1B9 as seed ortholog is 100%.
Bootstrap support for D3AWL9 as seed ortholog is 100%.

Group of orthologs #875. Best score 216 bits
Score difference with first non-orthologous sequence - A.capsulata:216 P.pallidum:216

C0NFT8              	100.00%		D3BM56              	100.00%
Bootstrap support for C0NFT8 as seed ortholog is 100%.
Bootstrap support for D3BM56 as seed ortholog is 100%.

Group of orthologs #876. Best score 216 bits
Score difference with first non-orthologous sequence - A.capsulata:216 P.pallidum:216

C0NH79              	100.00%		D3BP95              	100.00%
Bootstrap support for C0NH79 as seed ortholog is 100%.
Bootstrap support for D3BP95 as seed ortholog is 100%.

Group of orthologs #877. Best score 215 bits
Score difference with first non-orthologous sequence - A.capsulata:215 P.pallidum:215

C0NNS1              	100.00%		D3AWV5              	100.00%
Bootstrap support for C0NNS1 as seed ortholog is 100%.
Bootstrap support for D3AWV5 as seed ortholog is 100%.

Group of orthologs #878. Best score 215 bits
Score difference with first non-orthologous sequence - A.capsulata:215 P.pallidum:215

C0NDW5              	100.00%		D3BAQ9              	100.00%
Bootstrap support for C0NDW5 as seed ortholog is 100%.
Bootstrap support for D3BAQ9 as seed ortholog is 100%.

Group of orthologs #879. Best score 215 bits
Score difference with first non-orthologous sequence - A.capsulata:215 P.pallidum:215

C0NWK5              	100.00%		D3B2R8              	100.00%
Bootstrap support for C0NWK5 as seed ortholog is 100%.
Bootstrap support for D3B2R8 as seed ortholog is 100%.

Group of orthologs #880. Best score 215 bits
Score difference with first non-orthologous sequence - A.capsulata:215 P.pallidum:215

C0NUV9              	100.00%		D3BMU1              	100.00%
Bootstrap support for C0NUV9 as seed ortholog is 100%.
Bootstrap support for D3BMU1 as seed ortholog is 100%.

Group of orthologs #881. Best score 214 bits
Score difference with first non-orthologous sequence - A.capsulata:214 P.pallidum:214

C0NBX6              	100.00%		D3BN12              	100.00%
Bootstrap support for C0NBX6 as seed ortholog is 100%.
Bootstrap support for D3BN12 as seed ortholog is 100%.

Group of orthologs #882. Best score 214 bits
Score difference with first non-orthologous sequence - A.capsulata:214 P.pallidum:214

C0NCX8              	100.00%		D3BNG5              	100.00%
Bootstrap support for C0NCX8 as seed ortholog is 100%.
Bootstrap support for D3BNG5 as seed ortholog is 100%.

Group of orthologs #883. Best score 214 bits
Score difference with first non-orthologous sequence - A.capsulata:214 P.pallidum:214

C0NP12              	100.00%		D3BUA6              	100.00%
Bootstrap support for C0NP12 as seed ortholog is 100%.
Bootstrap support for D3BUA6 as seed ortholog is 100%.

Group of orthologs #884. Best score 213 bits
Score difference with first non-orthologous sequence - A.capsulata:213 P.pallidum:213

C0NDK3              	100.00%		D3BIR3              	100.00%
Bootstrap support for C0NDK3 as seed ortholog is 100%.
Bootstrap support for D3BIR3 as seed ortholog is 100%.

Group of orthologs #885. Best score 213 bits
Score difference with first non-orthologous sequence - A.capsulata:38 P.pallidum:101

C0NG49              	100.00%		D3BHG8              	100.00%
Bootstrap support for C0NG49 as seed ortholog is 82%.
Bootstrap support for D3BHG8 as seed ortholog is 99%.

Group of orthologs #886. Best score 213 bits
Score difference with first non-orthologous sequence - A.capsulata:213 P.pallidum:120

C0NM44              	100.00%		D3BRD6              	100.00%
Bootstrap support for C0NM44 as seed ortholog is 100%.
Bootstrap support for D3BRD6 as seed ortholog is 99%.

Group of orthologs #887. Best score 212 bits
Score difference with first non-orthologous sequence - A.capsulata:212 P.pallidum:212

C0NN25              	100.00%		D3AYM5              	100.00%
Bootstrap support for C0NN25 as seed ortholog is 100%.
Bootstrap support for D3AYM5 as seed ortholog is 100%.

Group of orthologs #888. Best score 212 bits
Score difference with first non-orthologous sequence - A.capsulata:212 P.pallidum:212

C0NGJ1              	100.00%		D3BUZ2              	100.00%
Bootstrap support for C0NGJ1 as seed ortholog is 100%.
Bootstrap support for D3BUZ2 as seed ortholog is 100%.

Group of orthologs #889. Best score 212 bits
Score difference with first non-orthologous sequence - A.capsulata:212 P.pallidum:212

C0NZV5              	100.00%		D3BFU2              	100.00%
Bootstrap support for C0NZV5 as seed ortholog is 100%.
Bootstrap support for D3BFU2 as seed ortholog is 100%.

Group of orthologs #890. Best score 212 bits
Score difference with first non-orthologous sequence - A.capsulata:78 P.pallidum:7

C0NL60              	100.00%		D3BUT3              	100.00%
Bootstrap support for C0NL60 as seed ortholog is 99%.
Bootstrap support for D3BUT3 as seed ortholog is 67%.
Alternative seed ortholog is D3B633 (7 bits away from this cluster)

Group of orthologs #891. Best score 211 bits
Score difference with first non-orthologous sequence - A.capsulata:211 P.pallidum:211

C0NLZ5              	100.00%		D3AZC2              	100.00%
C0NDA3              	100.00%		D3BBK0              	100.00%
C0NP54              	12.95%		D3BAX3              	20.00%
                    	       		D3B6W9              	17.13%
                    	       		D3BP98              	16.52%
Bootstrap support for C0NLZ5 as seed ortholog is 100%.
Bootstrap support for C0NDA3 as seed ortholog is 100%.
Bootstrap support for D3AZC2 as seed ortholog is 100%.
Bootstrap support for D3BBK0 as seed ortholog is 100%.

Group of orthologs #892. Best score 211 bits
Score difference with first non-orthologous sequence - A.capsulata:211 P.pallidum:211

C0NGB8              	100.00%		D3B3N7              	100.00%
                    	       		D3B7G1              	20.91%
Bootstrap support for C0NGB8 as seed ortholog is 100%.
Bootstrap support for D3B3N7 as seed ortholog is 100%.

Group of orthologs #893. Best score 211 bits
Score difference with first non-orthologous sequence - A.capsulata:211 P.pallidum:211

C0NBT1              	100.00%		D3BBQ0              	100.00%
Bootstrap support for C0NBT1 as seed ortholog is 100%.
Bootstrap support for D3BBQ0 as seed ortholog is 100%.

Group of orthologs #894. Best score 211 bits
Score difference with first non-orthologous sequence - A.capsulata:211 P.pallidum:211

C0NFS7              	100.00%		D3BJU0              	100.00%
Bootstrap support for C0NFS7 as seed ortholog is 100%.
Bootstrap support for D3BJU0 as seed ortholog is 100%.

Group of orthologs #895. Best score 211 bits
Score difference with first non-orthologous sequence - A.capsulata:211 P.pallidum:211

C0NM58              	100.00%		D3BE93              	100.00%
Bootstrap support for C0NM58 as seed ortholog is 100%.
Bootstrap support for D3BE93 as seed ortholog is 100%.

Group of orthologs #896. Best score 211 bits
Score difference with first non-orthologous sequence - A.capsulata:115 P.pallidum:126

C0NS69              	100.00%		D3BAG5              	100.00%
Bootstrap support for C0NS69 as seed ortholog is 99%.
Bootstrap support for D3BAG5 as seed ortholog is 100%.

Group of orthologs #897. Best score 210 bits
Score difference with first non-orthologous sequence - A.capsulata:210 P.pallidum:210

C0NC95              	100.00%		D3BR11              	100.00%
                    	       		D3BHF8              	9.91%
                    	       		D3B0M3              	7.01%
Bootstrap support for C0NC95 as seed ortholog is 100%.
Bootstrap support for D3BR11 as seed ortholog is 100%.

Group of orthologs #898. Best score 210 bits
Score difference with first non-orthologous sequence - A.capsulata:82 P.pallidum:84

C0NLR3              	100.00%		D3B436              	100.00%
Bootstrap support for C0NLR3 as seed ortholog is 96%.
Bootstrap support for D3B436 as seed ortholog is 98%.

Group of orthologs #899. Best score 210 bits
Score difference with first non-orthologous sequence - A.capsulata:210 P.pallidum:210

C0NG13              	100.00%		D3BA80              	100.00%
Bootstrap support for C0NG13 as seed ortholog is 100%.
Bootstrap support for D3BA80 as seed ortholog is 100%.

Group of orthologs #900. Best score 210 bits
Score difference with first non-orthologous sequence - A.capsulata:210 P.pallidum:210

C0NE84              	100.00%		D3BEM8              	100.00%
Bootstrap support for C0NE84 as seed ortholog is 100%.
Bootstrap support for D3BEM8 as seed ortholog is 100%.

Group of orthologs #901. Best score 210 bits
Score difference with first non-orthologous sequence - A.capsulata:210 P.pallidum:210

C0NSH3              	100.00%		D3B381              	100.00%
Bootstrap support for C0NSH3 as seed ortholog is 100%.
Bootstrap support for D3B381 as seed ortholog is 100%.

Group of orthologs #902. Best score 210 bits
Score difference with first non-orthologous sequence - A.capsulata:210 P.pallidum:210

C0NYW7              	100.00%		D3AXB8              	100.00%
Bootstrap support for C0NYW7 as seed ortholog is 100%.
Bootstrap support for D3AXB8 as seed ortholog is 100%.

Group of orthologs #903. Best score 210 bits
Score difference with first non-orthologous sequence - A.capsulata:210 P.pallidum:210

C0NF13              	100.00%		D3BRK8              	100.00%
Bootstrap support for C0NF13 as seed ortholog is 100%.
Bootstrap support for D3BRK8 as seed ortholog is 100%.

Group of orthologs #904. Best score 210 bits
Score difference with first non-orthologous sequence - A.capsulata:58 P.pallidum:210

C0NEK7              	100.00%		D3BS99              	100.00%
Bootstrap support for C0NEK7 as seed ortholog is 94%.
Bootstrap support for D3BS99 as seed ortholog is 100%.

Group of orthologs #905. Best score 210 bits
Score difference with first non-orthologous sequence - A.capsulata:210 P.pallidum:72

C0NW74              	100.00%		D3BB06              	100.00%
Bootstrap support for C0NW74 as seed ortholog is 100%.
Bootstrap support for D3BB06 as seed ortholog is 99%.

Group of orthologs #906. Best score 210 bits
Score difference with first non-orthologous sequence - A.capsulata:210 P.pallidum:210

C0NV64              	100.00%		D3BM88              	100.00%
Bootstrap support for C0NV64 as seed ortholog is 100%.
Bootstrap support for D3BM88 as seed ortholog is 100%.

Group of orthologs #907. Best score 209 bits
Score difference with first non-orthologous sequence - A.capsulata:209 P.pallidum:209

C0NC43              	100.00%		D3BPW6              	100.00%
Bootstrap support for C0NC43 as seed ortholog is 100%.
Bootstrap support for D3BPW6 as seed ortholog is 100%.

Group of orthologs #908. Best score 209 bits
Score difference with first non-orthologous sequence - A.capsulata:209 P.pallidum:209

C0NZ34              	100.00%		D3B6L9              	100.00%
Bootstrap support for C0NZ34 as seed ortholog is 100%.
Bootstrap support for D3B6L9 as seed ortholog is 100%.

Group of orthologs #909. Best score 208 bits
Score difference with first non-orthologous sequence - A.capsulata:208 P.pallidum:208

C0NBQ0              	100.00%		D3B3A4              	100.00%
Bootstrap support for C0NBQ0 as seed ortholog is 100%.
Bootstrap support for D3B3A4 as seed ortholog is 100%.

Group of orthologs #910. Best score 208 bits
Score difference with first non-orthologous sequence - A.capsulata:208 P.pallidum:208

C0NHL3              	100.00%		D3AXP5              	100.00%
Bootstrap support for C0NHL3 as seed ortholog is 100%.
Bootstrap support for D3AXP5 as seed ortholog is 100%.

Group of orthologs #911. Best score 208 bits
Score difference with first non-orthologous sequence - A.capsulata:208 P.pallidum:208

C0NJ96              	100.00%		D3B734              	100.00%
Bootstrap support for C0NJ96 as seed ortholog is 100%.
Bootstrap support for D3B734 as seed ortholog is 100%.

Group of orthologs #912. Best score 208 bits
Score difference with first non-orthologous sequence - A.capsulata:208 P.pallidum:208

C0NGC9              	100.00%		D3BQB0              	100.00%
Bootstrap support for C0NGC9 as seed ortholog is 100%.
Bootstrap support for D3BQB0 as seed ortholog is 100%.

Group of orthologs #913. Best score 208 bits
Score difference with first non-orthologous sequence - A.capsulata:57 P.pallidum:208

C0NZL1              	100.00%		D3B961              	100.00%
Bootstrap support for C0NZL1 as seed ortholog is 93%.
Bootstrap support for D3B961 as seed ortholog is 100%.

Group of orthologs #914. Best score 208 bits
Score difference with first non-orthologous sequence - A.capsulata:208 P.pallidum:208

C0NQV8              	100.00%		D3BV90              	100.00%
Bootstrap support for C0NQV8 as seed ortholog is 100%.
Bootstrap support for D3BV90 as seed ortholog is 100%.

Group of orthologs #915. Best score 208 bits
Score difference with first non-orthologous sequence - A.capsulata:144 P.pallidum:70

C0P161              	100.00%		D3BJX9              	100.00%
Bootstrap support for C0P161 as seed ortholog is 100%.
Bootstrap support for D3BJX9 as seed ortholog is 99%.

Group of orthologs #916. Best score 207 bits
Score difference with first non-orthologous sequence - A.capsulata:207 P.pallidum:207

C0NBF9              	100.00%		D3AWB0              	100.00%
Bootstrap support for C0NBF9 as seed ortholog is 100%.
Bootstrap support for D3AWB0 as seed ortholog is 100%.

Group of orthologs #917. Best score 207 bits
Score difference with first non-orthologous sequence - A.capsulata:207 P.pallidum:207

C0NL12              	100.00%		D3B0P9              	100.00%
Bootstrap support for C0NL12 as seed ortholog is 100%.
Bootstrap support for D3B0P9 as seed ortholog is 100%.

Group of orthologs #918. Best score 207 bits
Score difference with first non-orthologous sequence - A.capsulata:207 P.pallidum:207

C0NRR5              	100.00%		D3B2L6              	100.00%
Bootstrap support for C0NRR5 as seed ortholog is 100%.
Bootstrap support for D3B2L6 as seed ortholog is 100%.

Group of orthologs #919. Best score 207 bits
Score difference with first non-orthologous sequence - A.capsulata:110 P.pallidum:207

C0NHC5              	100.00%		D3BE74              	100.00%
Bootstrap support for C0NHC5 as seed ortholog is 99%.
Bootstrap support for D3BE74 as seed ortholog is 100%.

Group of orthologs #920. Best score 207 bits
Score difference with first non-orthologous sequence - A.capsulata:207 P.pallidum:207

C0NXK1              	100.00%		D3B7L1              	100.00%
Bootstrap support for C0NXK1 as seed ortholog is 100%.
Bootstrap support for D3B7L1 as seed ortholog is 100%.

Group of orthologs #921. Best score 207 bits
Score difference with first non-orthologous sequence - A.capsulata:207 P.pallidum:207

C0NNE1              	100.00%		D3BK06              	100.00%
Bootstrap support for C0NNE1 as seed ortholog is 100%.
Bootstrap support for D3BK06 as seed ortholog is 100%.

Group of orthologs #922. Best score 207 bits
Score difference with first non-orthologous sequence - A.capsulata:207 P.pallidum:207

C0NP60              	100.00%		D3BPM7              	100.00%
Bootstrap support for C0NP60 as seed ortholog is 100%.
Bootstrap support for D3BPM7 as seed ortholog is 100%.

Group of orthologs #923. Best score 207 bits
Score difference with first non-orthologous sequence - A.capsulata:207 P.pallidum:207

C0NVL0              	100.00%		D3BJ18              	100.00%
Bootstrap support for C0NVL0 as seed ortholog is 100%.
Bootstrap support for D3BJ18 as seed ortholog is 100%.

Group of orthologs #924. Best score 207 bits
Score difference with first non-orthologous sequence - A.capsulata:207 P.pallidum:207

C0NVJ2              	100.00%		D3BLY0              	100.00%
Bootstrap support for C0NVJ2 as seed ortholog is 100%.
Bootstrap support for D3BLY0 as seed ortholog is 100%.

Group of orthologs #925. Best score 206 bits
Score difference with first non-orthologous sequence - A.capsulata:206 P.pallidum:206

C0P0D9              	100.00%		D3BM63              	100.00%
                    	       		D3B9W4              	17.97%
Bootstrap support for C0P0D9 as seed ortholog is 100%.
Bootstrap support for D3BM63 as seed ortholog is 100%.

Group of orthologs #926. Best score 206 bits
Score difference with first non-orthologous sequence - A.capsulata:54 P.pallidum:206

C0NCU0              	100.00%		D3B895              	100.00%
Bootstrap support for C0NCU0 as seed ortholog is 86%.
Bootstrap support for D3B895 as seed ortholog is 100%.

Group of orthologs #927. Best score 206 bits
Score difference with first non-orthologous sequence - A.capsulata:206 P.pallidum:206

C0NQ86              	100.00%		D3B6S2              	100.00%
Bootstrap support for C0NQ86 as seed ortholog is 100%.
Bootstrap support for D3B6S2 as seed ortholog is 100%.

Group of orthologs #928. Best score 206 bits
Score difference with first non-orthologous sequence - A.capsulata:36 P.pallidum:122

C0NMM6              	100.00%		D3BH67              	100.00%
Bootstrap support for C0NMM6 as seed ortholog is 88%.
Bootstrap support for D3BH67 as seed ortholog is 99%.

Group of orthologs #929. Best score 206 bits
Score difference with first non-orthologous sequence - A.capsulata:114 P.pallidum:206

C0NZA8              	100.00%		D3B5U7              	100.00%
Bootstrap support for C0NZA8 as seed ortholog is 100%.
Bootstrap support for D3B5U7 as seed ortholog is 100%.

Group of orthologs #930. Best score 205 bits
Score difference with first non-orthologous sequence - A.capsulata:205 P.pallidum:205

C0NGE8              	100.00%		D3AW49              	100.00%
Bootstrap support for C0NGE8 as seed ortholog is 100%.
Bootstrap support for D3AW49 as seed ortholog is 100%.

Group of orthologs #931. Best score 205 bits
Score difference with first non-orthologous sequence - A.capsulata:205 P.pallidum:205

C0NCN0              	100.00%		D3B6J5              	100.00%
Bootstrap support for C0NCN0 as seed ortholog is 100%.
Bootstrap support for D3B6J5 as seed ortholog is 100%.

Group of orthologs #932. Best score 205 bits
Score difference with first non-orthologous sequence - A.capsulata:205 P.pallidum:118

C0P0E9              	100.00%		D3AZ65              	100.00%
Bootstrap support for C0P0E9 as seed ortholog is 100%.
Bootstrap support for D3AZ65 as seed ortholog is 99%.

Group of orthologs #933. Best score 205 bits
Score difference with first non-orthologous sequence - A.capsulata:205 P.pallidum:205

C0NJY5              	100.00%		D3BFQ0              	100.00%
Bootstrap support for C0NJY5 as seed ortholog is 100%.
Bootstrap support for D3BFQ0 as seed ortholog is 100%.

Group of orthologs #934. Best score 205 bits
Score difference with first non-orthologous sequence - A.capsulata:112 P.pallidum:122

C0NZ97              	100.00%		D3BAT4              	100.00%
Bootstrap support for C0NZ97 as seed ortholog is 99%.
Bootstrap support for D3BAT4 as seed ortholog is 99%.

Group of orthologs #935. Best score 205 bits
Score difference with first non-orthologous sequence - A.capsulata:99 P.pallidum:84

C0NRH4              	100.00%		D3BR84              	100.00%
Bootstrap support for C0NRH4 as seed ortholog is 99%.
Bootstrap support for D3BR84 as seed ortholog is 99%.

Group of orthologs #936. Best score 205 bits
Score difference with first non-orthologous sequence - A.capsulata:100 P.pallidum:205

C0NZ57              	100.00%		D3BJJ6              	100.00%
Bootstrap support for C0NZ57 as seed ortholog is 99%.
Bootstrap support for D3BJJ6 as seed ortholog is 100%.

Group of orthologs #937. Best score 204 bits
Score difference with first non-orthologous sequence - A.capsulata:204 P.pallidum:204

C0NV09              	100.00%		D3B508              	100.00%
Bootstrap support for C0NV09 as seed ortholog is 100%.
Bootstrap support for D3B508 as seed ortholog is 100%.

Group of orthologs #938. Best score 204 bits
Score difference with first non-orthologous sequence - A.capsulata:204 P.pallidum:204

C0NMT1              	100.00%		D3BLE5              	100.00%
Bootstrap support for C0NMT1 as seed ortholog is 100%.
Bootstrap support for D3BLE5 as seed ortholog is 100%.

Group of orthologs #939. Best score 204 bits
Score difference with first non-orthologous sequence - A.capsulata:65 P.pallidum:204

C0NX46              	100.00%		D3BCD0              	100.00%
Bootstrap support for C0NX46 as seed ortholog is 95%.
Bootstrap support for D3BCD0 as seed ortholog is 100%.

Group of orthologs #940. Best score 204 bits
Score difference with first non-orthologous sequence - A.capsulata:204 P.pallidum:204

C0NQQ6              	100.00%		D3BQU0              	100.00%
Bootstrap support for C0NQQ6 as seed ortholog is 100%.
Bootstrap support for D3BQU0 as seed ortholog is 100%.

Group of orthologs #941. Best score 204 bits
Score difference with first non-orthologous sequence - A.capsulata:61 P.pallidum:69

C0NTV9              	100.00%		D3BQ39              	100.00%
Bootstrap support for C0NTV9 as seed ortholog is 95%.
Bootstrap support for D3BQ39 as seed ortholog is 98%.

Group of orthologs #942. Best score 203 bits
Score difference with first non-orthologous sequence - A.capsulata:121 P.pallidum:79

C0NIP9              	100.00%		D3B850              	100.00%
                    	       		D3AXD1              	20.00%
Bootstrap support for C0NIP9 as seed ortholog is 100%.
Bootstrap support for D3B850 as seed ortholog is 99%.

Group of orthologs #943. Best score 203 bits
Score difference with first non-orthologous sequence - A.capsulata:203 P.pallidum:98

C0NFA2              	100.00%		D3AX98              	100.00%
Bootstrap support for C0NFA2 as seed ortholog is 100%.
Bootstrap support for D3AX98 as seed ortholog is 100%.

Group of orthologs #944. Best score 203 bits
Score difference with first non-orthologous sequence - A.capsulata:203 P.pallidum:203

C0NCD6              	100.00%		D3BCK9              	100.00%
Bootstrap support for C0NCD6 as seed ortholog is 100%.
Bootstrap support for D3BCK9 as seed ortholog is 100%.

Group of orthologs #945. Best score 203 bits
Score difference with first non-orthologous sequence - A.capsulata:203 P.pallidum:203

C0NAM7              	100.00%		D3BJX1              	100.00%
Bootstrap support for C0NAM7 as seed ortholog is 100%.
Bootstrap support for D3BJX1 as seed ortholog is 100%.

Group of orthologs #946. Best score 203 bits
Score difference with first non-orthologous sequence - A.capsulata:203 P.pallidum:203

C0NVZ4              	100.00%		D3B2U9              	100.00%
Bootstrap support for C0NVZ4 as seed ortholog is 100%.
Bootstrap support for D3B2U9 as seed ortholog is 100%.

Group of orthologs #947. Best score 203 bits
Score difference with first non-orthologous sequence - A.capsulata:23 P.pallidum:203

C0NJG0              	100.00%		D3BI96              	100.00%
Bootstrap support for C0NJG0 as seed ortholog is 77%.
Bootstrap support for D3BI96 as seed ortholog is 100%.

Group of orthologs #948. Best score 203 bits
Score difference with first non-orthologous sequence - A.capsulata:203 P.pallidum:203

C0P041              	100.00%		D3B4M5              	100.00%
Bootstrap support for C0P041 as seed ortholog is 100%.
Bootstrap support for D3B4M5 as seed ortholog is 100%.

Group of orthologs #949. Best score 202 bits
Score difference with first non-orthologous sequence - A.capsulata:202 P.pallidum:202

C0NEC5              	100.00%		D3BJ85              	100.00%
Bootstrap support for C0NEC5 as seed ortholog is 100%.
Bootstrap support for D3BJ85 as seed ortholog is 100%.

Group of orthologs #950. Best score 202 bits
Score difference with first non-orthologous sequence - A.capsulata:202 P.pallidum:152

C0NNH9              	100.00%		D3BG93              	100.00%
Bootstrap support for C0NNH9 as seed ortholog is 100%.
Bootstrap support for D3BG93 as seed ortholog is 99%.

Group of orthologs #951. Best score 202 bits
Score difference with first non-orthologous sequence - A.capsulata:202 P.pallidum:202

C0NNP2              	100.00%		D3BKF4              	100.00%
Bootstrap support for C0NNP2 as seed ortholog is 100%.
Bootstrap support for D3BKF4 as seed ortholog is 100%.

Group of orthologs #952. Best score 201 bits
Score difference with first non-orthologous sequence - A.capsulata:157 P.pallidum:201

C0NDE3              	100.00%		D3B611              	100.00%
Bootstrap support for C0NDE3 as seed ortholog is 99%.
Bootstrap support for D3B611 as seed ortholog is 100%.

Group of orthologs #953. Best score 201 bits
Score difference with first non-orthologous sequence - A.capsulata:201 P.pallidum:27

C0NAP7              	100.00%		D3BGD2              	100.00%
Bootstrap support for C0NAP7 as seed ortholog is 100%.
Bootstrap support for D3BGD2 as seed ortholog is 95%.

Group of orthologs #954. Best score 201 bits
Score difference with first non-orthologous sequence - A.capsulata:201 P.pallidum:201

C0NW49              	100.00%		D3BE20              	100.00%
Bootstrap support for C0NW49 as seed ortholog is 100%.
Bootstrap support for D3BE20 as seed ortholog is 100%.

Group of orthologs #955. Best score 201 bits
Score difference with first non-orthologous sequence - A.capsulata:19 P.pallidum:201

C0NG61              	100.00%		D3BV85              	100.00%
Bootstrap support for C0NG61 as seed ortholog is 68%.
Alternative seed ortholog is C0NT80 (19 bits away from this cluster)
Bootstrap support for D3BV85 as seed ortholog is 100%.

Group of orthologs #956. Best score 201 bits
Score difference with first non-orthologous sequence - A.capsulata:201 P.pallidum:201

C0NV38              	100.00%		D3BS90              	100.00%
Bootstrap support for C0NV38 as seed ortholog is 100%.
Bootstrap support for D3BS90 as seed ortholog is 100%.

Group of orthologs #957. Best score 200 bits
Score difference with first non-orthologous sequence - A.capsulata:41 P.pallidum:200

C0NBR7              	100.00%		D3B3L9              	100.00%
Bootstrap support for C0NBR7 as seed ortholog is 93%.
Bootstrap support for D3B3L9 as seed ortholog is 100%.

Group of orthologs #958. Best score 200 bits
Score difference with first non-orthologous sequence - A.capsulata:200 P.pallidum:200

C0NI39              	100.00%		D3B8K6              	100.00%
Bootstrap support for C0NI39 as seed ortholog is 100%.
Bootstrap support for D3B8K6 as seed ortholog is 100%.

Group of orthologs #959. Best score 200 bits
Score difference with first non-orthologous sequence - A.capsulata:200 P.pallidum:200

C0NKA1              	100.00%		D3BB37              	100.00%
Bootstrap support for C0NKA1 as seed ortholog is 100%.
Bootstrap support for D3BB37 as seed ortholog is 100%.

Group of orthologs #960. Best score 200 bits
Score difference with first non-orthologous sequence - A.capsulata:200 P.pallidum:200

C0NHK2              	100.00%		D3BSY9              	100.00%
Bootstrap support for C0NHK2 as seed ortholog is 100%.
Bootstrap support for D3BSY9 as seed ortholog is 100%.

Group of orthologs #961. Best score 200 bits
Score difference with first non-orthologous sequence - A.capsulata:64 P.pallidum:200

C0NYA2              	100.00%		D3BDL0              	100.00%
Bootstrap support for C0NYA2 as seed ortholog is 94%.
Bootstrap support for D3BDL0 as seed ortholog is 100%.

Group of orthologs #962. Best score 199 bits
Score difference with first non-orthologous sequence - A.capsulata:199 P.pallidum:199

C0NFD3              	100.00%		D3B782              	100.00%
                    	       		D3AX99              	62.01%
Bootstrap support for C0NFD3 as seed ortholog is 100%.
Bootstrap support for D3B782 as seed ortholog is 100%.

Group of orthologs #963. Best score 199 bits
Score difference with first non-orthologous sequence - A.capsulata:24 P.pallidum:110

C0NLN1              	100.00%		D3BFJ2              	100.00%
                    	       		D3B5I3              	5.68%
Bootstrap support for C0NLN1 as seed ortholog is 73%.
Alternative seed ortholog is C0NGH2 (24 bits away from this cluster)
Bootstrap support for D3BFJ2 as seed ortholog is 99%.

Group of orthologs #964. Best score 199 bits
Score difference with first non-orthologous sequence - A.capsulata:199 P.pallidum:199

C0P0N0              	100.00%		D3B1H3              	100.00%
Bootstrap support for C0P0N0 as seed ortholog is 100%.
Bootstrap support for D3B1H3 as seed ortholog is 100%.

Group of orthologs #965. Best score 199 bits
Score difference with first non-orthologous sequence - A.capsulata:199 P.pallidum:140

C0NCE5              	100.00%		D3BR16              	100.00%
Bootstrap support for C0NCE5 as seed ortholog is 100%.
Bootstrap support for D3BR16 as seed ortholog is 99%.

Group of orthologs #966. Best score 198 bits
Score difference with first non-orthologous sequence - A.capsulata:198 P.pallidum:198

C0NPL9              	100.00%		D3BIJ6              	100.00%
                    	       		D3BAX5              	25.00%
Bootstrap support for C0NPL9 as seed ortholog is 100%.
Bootstrap support for D3BIJ6 as seed ortholog is 100%.

Group of orthologs #967. Best score 198 bits
Score difference with first non-orthologous sequence - A.capsulata:198 P.pallidum:198

C0NNH7              	100.00%		D3B7C4              	100.00%
Bootstrap support for C0NNH7 as seed ortholog is 100%.
Bootstrap support for D3B7C4 as seed ortholog is 100%.

Group of orthologs #968. Best score 198 bits
Score difference with first non-orthologous sequence - A.capsulata:69 P.pallidum:103

C0NFK4              	100.00%		D3BUR4              	100.00%
Bootstrap support for C0NFK4 as seed ortholog is 97%.
Bootstrap support for D3BUR4 as seed ortholog is 99%.

Group of orthologs #969. Best score 198 bits
Score difference with first non-orthologous sequence - A.capsulata:69 P.pallidum:198

C0NPP1              	100.00%		D3BQ12              	100.00%
Bootstrap support for C0NPP1 as seed ortholog is 98%.
Bootstrap support for D3BQ12 as seed ortholog is 100%.

Group of orthologs #970. Best score 197 bits
Score difference with first non-orthologous sequence - A.capsulata:197 P.pallidum:197

C0NX65              	100.00%		D3B675              	100.00%
Bootstrap support for C0NX65 as seed ortholog is 100%.
Bootstrap support for D3B675 as seed ortholog is 100%.

Group of orthologs #971. Best score 197 bits
Score difference with first non-orthologous sequence - A.capsulata:197 P.pallidum:197

C0NB62              	100.00%		D3BT25              	100.00%
Bootstrap support for C0NB62 as seed ortholog is 100%.
Bootstrap support for D3BT25 as seed ortholog is 100%.

Group of orthologs #972. Best score 197 bits
Score difference with first non-orthologous sequence - A.capsulata:197 P.pallidum:197

C0NLZ2              	100.00%		D3BMJ9              	100.00%
Bootstrap support for C0NLZ2 as seed ortholog is 100%.
Bootstrap support for D3BMJ9 as seed ortholog is 100%.

Group of orthologs #973. Best score 197 bits
Score difference with first non-orthologous sequence - A.capsulata:197 P.pallidum:197

C0NW02              	100.00%		D3BMF6              	100.00%
Bootstrap support for C0NW02 as seed ortholog is 100%.
Bootstrap support for D3BMF6 as seed ortholog is 100%.

Group of orthologs #974. Best score 196 bits
Score difference with first non-orthologous sequence - A.capsulata:119 P.pallidum:89

C0NCA7              	100.00%		D3B2M5              	100.00%
Bootstrap support for C0NCA7 as seed ortholog is 99%.
Bootstrap support for D3B2M5 as seed ortholog is 99%.

Group of orthologs #975. Best score 196 bits
Score difference with first non-orthologous sequence - A.capsulata:196 P.pallidum:196

C0NLV2              	100.00%		D3B2G1              	100.00%
Bootstrap support for C0NLV2 as seed ortholog is 100%.
Bootstrap support for D3B2G1 as seed ortholog is 100%.

Group of orthologs #976. Best score 196 bits
Score difference with first non-orthologous sequence - A.capsulata:196 P.pallidum:57

C0NIX9              	100.00%		D3B5G2              	100.00%
Bootstrap support for C0NIX9 as seed ortholog is 100%.
Bootstrap support for D3B5G2 as seed ortholog is 94%.

Group of orthologs #977. Best score 196 bits
Score difference with first non-orthologous sequence - A.capsulata:196 P.pallidum:196

C0NSC5              	100.00%		D3AZV9              	100.00%
Bootstrap support for C0NSC5 as seed ortholog is 100%.
Bootstrap support for D3AZV9 as seed ortholog is 100%.

Group of orthologs #978. Best score 196 bits
Score difference with first non-orthologous sequence - A.capsulata:196 P.pallidum:196

C0NYM4              	100.00%		D3AW89              	100.00%
Bootstrap support for C0NYM4 as seed ortholog is 100%.
Bootstrap support for D3AW89 as seed ortholog is 100%.

Group of orthologs #979. Best score 196 bits
Score difference with first non-orthologous sequence - A.capsulata:98 P.pallidum:196

C0NFW3              	100.00%		D3BGG3              	100.00%
Bootstrap support for C0NFW3 as seed ortholog is 97%.
Bootstrap support for D3BGG3 as seed ortholog is 100%.

Group of orthologs #980. Best score 196 bits
Score difference with first non-orthologous sequence - A.capsulata:196 P.pallidum:196

C0NZM0              	100.00%		D3B5F9              	100.00%
Bootstrap support for C0NZM0 as seed ortholog is 100%.
Bootstrap support for D3B5F9 as seed ortholog is 100%.

Group of orthologs #981. Best score 196 bits
Score difference with first non-orthologous sequence - A.capsulata:196 P.pallidum:196

C0NVA3              	100.00%		D3BG08              	100.00%
Bootstrap support for C0NVA3 as seed ortholog is 100%.
Bootstrap support for D3BG08 as seed ortholog is 100%.

Group of orthologs #982. Best score 196 bits
Score difference with first non-orthologous sequence - A.capsulata:196 P.pallidum:196

C0NHA4              	100.00%		D3BV19              	100.00%
Bootstrap support for C0NHA4 as seed ortholog is 100%.
Bootstrap support for D3BV19 as seed ortholog is 100%.

Group of orthologs #983. Best score 196 bits
Score difference with first non-orthologous sequence - A.capsulata:151 P.pallidum:196

C0NM33              	100.00%		D3BUN5              	100.00%
Bootstrap support for C0NM33 as seed ortholog is 100%.
Bootstrap support for D3BUN5 as seed ortholog is 100%.

Group of orthologs #984. Best score 195 bits
Score difference with first non-orthologous sequence - A.capsulata:75 P.pallidum:195

C0NLJ3              	100.00%		D3B0H8              	100.00%
                    	       		D3BN01              	35.68%
Bootstrap support for C0NLJ3 as seed ortholog is 97%.
Bootstrap support for D3B0H8 as seed ortholog is 100%.

Group of orthologs #985. Best score 195 bits
Score difference with first non-orthologous sequence - A.capsulata:195 P.pallidum:195

C0NC27              	100.00%		D3AW43              	100.00%
Bootstrap support for C0NC27 as seed ortholog is 100%.
Bootstrap support for D3AW43 as seed ortholog is 100%.

Group of orthologs #986. Best score 195 bits
Score difference with first non-orthologous sequence - A.capsulata:195 P.pallidum:195

C0NKG5              	100.00%		D3B1C2              	100.00%
Bootstrap support for C0NKG5 as seed ortholog is 100%.
Bootstrap support for D3B1C2 as seed ortholog is 100%.

Group of orthologs #987. Best score 195 bits
Score difference with first non-orthologous sequence - A.capsulata:195 P.pallidum:195

C0NNI1              	100.00%		D3B849              	100.00%
Bootstrap support for C0NNI1 as seed ortholog is 100%.
Bootstrap support for D3B849 as seed ortholog is 100%.

Group of orthologs #988. Best score 195 bits
Score difference with first non-orthologous sequence - A.capsulata:98 P.pallidum:95

C0NNY6              	100.00%		D3BHG1              	100.00%
Bootstrap support for C0NNY6 as seed ortholog is 99%.
Bootstrap support for D3BHG1 as seed ortholog is 99%.

Group of orthologs #989. Best score 195 bits
Score difference with first non-orthologous sequence - A.capsulata:195 P.pallidum:85

C0NRL0              	100.00%		D3BH42              	100.00%
Bootstrap support for C0NRL0 as seed ortholog is 100%.
Bootstrap support for D3BH42 as seed ortholog is 99%.

Group of orthologs #990. Best score 195 bits
Score difference with first non-orthologous sequence - A.capsulata:195 P.pallidum:195

C0P145              	100.00%		D3B9C7              	100.00%
Bootstrap support for C0P145 as seed ortholog is 100%.
Bootstrap support for D3B9C7 as seed ortholog is 100%.

Group of orthologs #991. Best score 194 bits
Score difference with first non-orthologous sequence - A.capsulata:194 P.pallidum:61

C0NLU4              	100.00%		D3B9X8              	100.00%
                    	       		D3BNC1              	30.29%
                    	       		D3AVP2              	19.26%
Bootstrap support for C0NLU4 as seed ortholog is 100%.
Bootstrap support for D3B9X8 as seed ortholog is 72%.
Alternative seed ortholog is D3BKG0 (61 bits away from this cluster)

Group of orthologs #992. Best score 194 bits
Score difference with first non-orthologous sequence - A.capsulata:194 P.pallidum:194

C0NN36              	100.00%		D3B5F4              	100.00%
Bootstrap support for C0NN36 as seed ortholog is 100%.
Bootstrap support for D3B5F4 as seed ortholog is 100%.

Group of orthologs #993. Best score 194 bits
Score difference with first non-orthologous sequence - A.capsulata:194 P.pallidum:135

C0NEW2              	100.00%		D3BFY9              	100.00%
Bootstrap support for C0NEW2 as seed ortholog is 100%.
Bootstrap support for D3BFY9 as seed ortholog is 99%.

Group of orthologs #994. Best score 194 bits
Score difference with first non-orthologous sequence - A.capsulata:194 P.pallidum:194

C0NJ23              	100.00%		D3BDG0              	100.00%
Bootstrap support for C0NJ23 as seed ortholog is 100%.
Bootstrap support for D3BDG0 as seed ortholog is 100%.

Group of orthologs #995. Best score 194 bits
Score difference with first non-orthologous sequence - A.capsulata:194 P.pallidum:194

C0NP52              	100.00%		D3BHJ9              	100.00%
Bootstrap support for C0NP52 as seed ortholog is 100%.
Bootstrap support for D3BHJ9 as seed ortholog is 100%.

Group of orthologs #996. Best score 194 bits
Score difference with first non-orthologous sequence - A.capsulata:194 P.pallidum:105

C0NL40              	100.00%		D3BPE3              	100.00%
Bootstrap support for C0NL40 as seed ortholog is 100%.
Bootstrap support for D3BPE3 as seed ortholog is 99%.

Group of orthologs #997. Best score 193 bits
Score difference with first non-orthologous sequence - A.capsulata:76 P.pallidum:193

C0NUK2              	100.00%		D3B885              	100.00%
C0NVG3              	9.92%		
Bootstrap support for C0NUK2 as seed ortholog is 98%.
Bootstrap support for D3B885 as seed ortholog is 100%.

Group of orthologs #998. Best score 193 bits
Score difference with first non-orthologous sequence - A.capsulata:81 P.pallidum:193

C0NBL0              	100.00%		D3BR73              	100.00%
Bootstrap support for C0NBL0 as seed ortholog is 98%.
Bootstrap support for D3BR73 as seed ortholog is 100%.

Group of orthologs #999. Best score 193 bits
Score difference with first non-orthologous sequence - A.capsulata:193 P.pallidum:117

C0NMI3              	100.00%		D3BFU9              	100.00%
Bootstrap support for C0NMI3 as seed ortholog is 100%.
Bootstrap support for D3BFU9 as seed ortholog is 99%.

Group of orthologs #1000. Best score 193 bits
Score difference with first non-orthologous sequence - A.capsulata:193 P.pallidum:193

C0NWA3              	100.00%		D3BTZ3              	100.00%
Bootstrap support for C0NWA3 as seed ortholog is 100%.
Bootstrap support for D3BTZ3 as seed ortholog is 100%.

Group of orthologs #1001. Best score 192 bits
Score difference with first non-orthologous sequence - A.capsulata:192 P.pallidum:192

C0NR49              	100.00%		D3AYH7              	100.00%
Bootstrap support for C0NR49 as seed ortholog is 100%.
Bootstrap support for D3AYH7 as seed ortholog is 100%.

Group of orthologs #1002. Best score 192 bits
Score difference with first non-orthologous sequence - A.capsulata:139 P.pallidum:192

C0NUE4              	100.00%		D3B2U1              	100.00%
Bootstrap support for C0NUE4 as seed ortholog is 100%.
Bootstrap support for D3B2U1 as seed ortholog is 100%.

Group of orthologs #1003. Best score 191 bits
Score difference with first non-orthologous sequence - A.capsulata:137 P.pallidum:191

C0NIH2              	100.00%		D3BCE7              	100.00%
Bootstrap support for C0NIH2 as seed ortholog is 97%.
Bootstrap support for D3BCE7 as seed ortholog is 100%.

Group of orthologs #1004. Best score 191 bits
Score difference with first non-orthologous sequence - A.capsulata:107 P.pallidum:191

C0NAD1              	100.00%		D3BKV9              	100.00%
Bootstrap support for C0NAD1 as seed ortholog is 99%.
Bootstrap support for D3BKV9 as seed ortholog is 100%.

Group of orthologs #1005. Best score 191 bits
Score difference with first non-orthologous sequence - A.capsulata:23 P.pallidum:191

C0NZD9              	100.00%		D3AX40              	100.00%
Bootstrap support for C0NZD9 as seed ortholog is 57%.
Alternative seed ortholog is C0NLI0 (23 bits away from this cluster)
Bootstrap support for D3AX40 as seed ortholog is 100%.

Group of orthologs #1006. Best score 191 bits
Score difference with first non-orthologous sequence - A.capsulata:191 P.pallidum:102

C0NM03              	100.00%		D3BAF1              	100.00%
Bootstrap support for C0NM03 as seed ortholog is 100%.
Bootstrap support for D3BAF1 as seed ortholog is 99%.

Group of orthologs #1007. Best score 191 bits
Score difference with first non-orthologous sequence - A.capsulata:191 P.pallidum:191

C0NTA4              	100.00%		D3BCC1              	100.00%
Bootstrap support for C0NTA4 as seed ortholog is 100%.
Bootstrap support for D3BCC1 as seed ortholog is 100%.

Group of orthologs #1008. Best score 191 bits
Score difference with first non-orthologous sequence - A.capsulata:191 P.pallidum:191

C0NID1              	100.00%		D3BSZ4              	100.00%
Bootstrap support for C0NID1 as seed ortholog is 100%.
Bootstrap support for D3BSZ4 as seed ortholog is 100%.

Group of orthologs #1009. Best score 191 bits
Score difference with first non-orthologous sequence - A.capsulata:191 P.pallidum:191

C0NL98              	100.00%		D3BQ67              	100.00%
Bootstrap support for C0NL98 as seed ortholog is 100%.
Bootstrap support for D3BQ67 as seed ortholog is 100%.

Group of orthologs #1010. Best score 190 bits
Score difference with first non-orthologous sequence - A.capsulata:190 P.pallidum:190

C0NMI8              	100.00%		D3AWA6              	100.00%
Bootstrap support for C0NMI8 as seed ortholog is 100%.
Bootstrap support for D3AWA6 as seed ortholog is 100%.

Group of orthologs #1011. Best score 190 bits
Score difference with first non-orthologous sequence - A.capsulata:190 P.pallidum:190

C0NZG0              	100.00%		D3BRL6              	100.00%
Bootstrap support for C0NZG0 as seed ortholog is 100%.
Bootstrap support for D3BRL6 as seed ortholog is 100%.

Group of orthologs #1012. Best score 189 bits
Score difference with first non-orthologous sequence - A.capsulata:88 P.pallidum:54

C0NHC4              	100.00%		D3AYS3              	100.00%
Bootstrap support for C0NHC4 as seed ortholog is 99%.
Bootstrap support for D3AYS3 as seed ortholog is 98%.

Group of orthologs #1013. Best score 189 bits
Score difference with first non-orthologous sequence - A.capsulata:189 P.pallidum:189

C0NLB0              	100.00%		D3AW31              	100.00%
Bootstrap support for C0NLB0 as seed ortholog is 100%.
Bootstrap support for D3AW31 as seed ortholog is 100%.

Group of orthologs #1014. Best score 189 bits
Score difference with first non-orthologous sequence - A.capsulata:189 P.pallidum:189

C0NCE3              	100.00%		D3B5J6              	100.00%
Bootstrap support for C0NCE3 as seed ortholog is 100%.
Bootstrap support for D3B5J6 as seed ortholog is 100%.

Group of orthologs #1015. Best score 189 bits
Score difference with first non-orthologous sequence - A.capsulata:189 P.pallidum:189

C0NB16              	100.00%		D3BKU3              	100.00%
Bootstrap support for C0NB16 as seed ortholog is 100%.
Bootstrap support for D3BKU3 as seed ortholog is 100%.

Group of orthologs #1016. Best score 189 bits
Score difference with first non-orthologous sequence - A.capsulata:121 P.pallidum:189

C0NXH7              	100.00%		D3BM61              	100.00%
Bootstrap support for C0NXH7 as seed ortholog is 98%.
Bootstrap support for D3BM61 as seed ortholog is 100%.

Group of orthologs #1017. Best score 189 bits
Score difference with first non-orthologous sequence - A.capsulata:189 P.pallidum:189

C0NUM5              	100.00%		D3BT29              	100.00%
Bootstrap support for C0NUM5 as seed ortholog is 100%.
Bootstrap support for D3BT29 as seed ortholog is 100%.

Group of orthologs #1018. Best score 188 bits
Score difference with first non-orthologous sequence - A.capsulata:54 P.pallidum:188

C0NA63              	100.00%		D3BRF5              	100.00%
                    	       		D3BMM2              	26.28%
                    	       		D3BQG0              	17.04%
                    	       		D3BAN4              	5.79%
Bootstrap support for C0NA63 as seed ortholog is 88%.
Bootstrap support for D3BRF5 as seed ortholog is 100%.

Group of orthologs #1019. Best score 188 bits
Score difference with first non-orthologous sequence - A.capsulata:188 P.pallidum:25

C0NE31              	100.00%		D3BQF5              	100.00%
Bootstrap support for C0NE31 as seed ortholog is 100%.
Bootstrap support for D3BQF5 as seed ortholog is 52%.
Alternative seed ortholog is D3BED2 (25 bits away from this cluster)

Group of orthologs #1020. Best score 188 bits
Score difference with first non-orthologous sequence - A.capsulata:188 P.pallidum:188

C0NWN9              	100.00%		D3BE66              	100.00%
Bootstrap support for C0NWN9 as seed ortholog is 100%.
Bootstrap support for D3BE66 as seed ortholog is 100%.

Group of orthologs #1021. Best score 188 bits
Score difference with first non-orthologous sequence - A.capsulata:188 P.pallidum:188

C0NQE3              	100.00%		D3BNL3              	100.00%
Bootstrap support for C0NQE3 as seed ortholog is 100%.
Bootstrap support for D3BNL3 as seed ortholog is 100%.

Group of orthologs #1022. Best score 188 bits
Score difference with first non-orthologous sequence - A.capsulata:188 P.pallidum:188

C0P0N1              	100.00%		D3BP64              	100.00%
Bootstrap support for C0P0N1 as seed ortholog is 100%.
Bootstrap support for D3BP64 as seed ortholog is 100%.

Group of orthologs #1023. Best score 187 bits
Score difference with first non-orthologous sequence - A.capsulata:187 P.pallidum:187

C0NW85              	100.00%		D3BH65              	100.00%
Bootstrap support for C0NW85 as seed ortholog is 100%.
Bootstrap support for D3BH65 as seed ortholog is 100%.

Group of orthologs #1024. Best score 186 bits
Score difference with first non-orthologous sequence - A.capsulata:186 P.pallidum:186

C0NGP0              	100.00%		D3B6W0              	100.00%
Bootstrap support for C0NGP0 as seed ortholog is 100%.
Bootstrap support for D3B6W0 as seed ortholog is 100%.

Group of orthologs #1025. Best score 186 bits
Score difference with first non-orthologous sequence - A.capsulata:186 P.pallidum:186

C0NRV0              	100.00%		D3B7N6              	100.00%
Bootstrap support for C0NRV0 as seed ortholog is 100%.
Bootstrap support for D3B7N6 as seed ortholog is 100%.

Group of orthologs #1026. Best score 186 bits
Score difference with first non-orthologous sequence - A.capsulata:186 P.pallidum:186

C0NEQ4              	100.00%		D3BKP9              	100.00%
Bootstrap support for C0NEQ4 as seed ortholog is 100%.
Bootstrap support for D3BKP9 as seed ortholog is 100%.

Group of orthologs #1027. Best score 186 bits
Score difference with first non-orthologous sequence - A.capsulata:134 P.pallidum:186

C0P150              	100.00%		D3AZF9              	100.00%
Bootstrap support for C0P150 as seed ortholog is 100%.
Bootstrap support for D3AZF9 as seed ortholog is 100%.

Group of orthologs #1028. Best score 186 bits
Score difference with first non-orthologous sequence - A.capsulata:186 P.pallidum:112

C0NQR3              	100.00%		D3BN57              	100.00%
Bootstrap support for C0NQR3 as seed ortholog is 100%.
Bootstrap support for D3BN57 as seed ortholog is 99%.

Group of orthologs #1029. Best score 186 bits
Score difference with first non-orthologous sequence - A.capsulata:186 P.pallidum:186

C0P108              	100.00%		D3BL61              	100.00%
Bootstrap support for C0P108 as seed ortholog is 100%.
Bootstrap support for D3BL61 as seed ortholog is 100%.

Group of orthologs #1030. Best score 185 bits
Score difference with first non-orthologous sequence - A.capsulata:66 P.pallidum:185

C0NFA0              	100.00%		D3B4Y1              	100.00%
Bootstrap support for C0NFA0 as seed ortholog is 86%.
Bootstrap support for D3B4Y1 as seed ortholog is 100%.

Group of orthologs #1031. Best score 185 bits
Score difference with first non-orthologous sequence - A.capsulata:185 P.pallidum:185

C0NDH9              	100.00%		D3BAX9              	100.00%
Bootstrap support for C0NDH9 as seed ortholog is 100%.
Bootstrap support for D3BAX9 as seed ortholog is 100%.

Group of orthologs #1032. Best score 185 bits
Score difference with first non-orthologous sequence - A.capsulata:185 P.pallidum:185

C0NTP9              	100.00%		D3AYZ5              	100.00%
Bootstrap support for C0NTP9 as seed ortholog is 100%.
Bootstrap support for D3AYZ5 as seed ortholog is 100%.

Group of orthologs #1033. Best score 185 bits
Score difference with first non-orthologous sequence - A.capsulata:45 P.pallidum:185

C0NV05              	100.00%		D3AYY9              	100.00%
Bootstrap support for C0NV05 as seed ortholog is 93%.
Bootstrap support for D3AYY9 as seed ortholog is 100%.

Group of orthologs #1034. Best score 185 bits
Score difference with first non-orthologous sequence - A.capsulata:185 P.pallidum:185

C0NR70              	100.00%		D3B5S9              	100.00%
Bootstrap support for C0NR70 as seed ortholog is 100%.
Bootstrap support for D3B5S9 as seed ortholog is 100%.

Group of orthologs #1035. Best score 185 bits
Score difference with first non-orthologous sequence - A.capsulata:185 P.pallidum:185

C0NYZ4              	100.00%		D3AY95              	100.00%
Bootstrap support for C0NYZ4 as seed ortholog is 100%.
Bootstrap support for D3AY95 as seed ortholog is 100%.

Group of orthologs #1036. Best score 185 bits
Score difference with first non-orthologous sequence - A.capsulata:185 P.pallidum:185

C0NBF4              	100.00%		D3BMX5              	100.00%
Bootstrap support for C0NBF4 as seed ortholog is 100%.
Bootstrap support for D3BMX5 as seed ortholog is 100%.

Group of orthologs #1037. Best score 185 bits
Score difference with first non-orthologous sequence - A.capsulata:185 P.pallidum:185

C0NLU6              	100.00%		D3BEN2              	100.00%
Bootstrap support for C0NLU6 as seed ortholog is 100%.
Bootstrap support for D3BEN2 as seed ortholog is 100%.

Group of orthologs #1038. Best score 185 bits
Score difference with first non-orthologous sequence - A.capsulata:185 P.pallidum:185

C0NG68              	100.00%		D3BNY1              	100.00%
Bootstrap support for C0NG68 as seed ortholog is 100%.
Bootstrap support for D3BNY1 as seed ortholog is 100%.

Group of orthologs #1039. Best score 185 bits
Score difference with first non-orthologous sequence - A.capsulata:185 P.pallidum:185

C0NI42              	100.00%		D3BS22              	100.00%
Bootstrap support for C0NI42 as seed ortholog is 100%.
Bootstrap support for D3BS22 as seed ortholog is 100%.

Group of orthologs #1040. Best score 185 bits
Score difference with first non-orthologous sequence - A.capsulata:185 P.pallidum:185

C0NVQ4              	100.00%		D3BKA5              	100.00%
Bootstrap support for C0NVQ4 as seed ortholog is 100%.
Bootstrap support for D3BKA5 as seed ortholog is 100%.

Group of orthologs #1041. Best score 185 bits
Score difference with first non-orthologous sequence - A.capsulata:185 P.pallidum:185

C0NYD8              	100.00%		D3BUX6              	100.00%
Bootstrap support for C0NYD8 as seed ortholog is 100%.
Bootstrap support for D3BUX6 as seed ortholog is 100%.

Group of orthologs #1042. Best score 184 bits
Score difference with first non-orthologous sequence - A.capsulata:184 P.pallidum:184

C0NCG7              	100.00%		D3B864              	100.00%
Bootstrap support for C0NCG7 as seed ortholog is 100%.
Bootstrap support for D3B864 as seed ortholog is 100%.

Group of orthologs #1043. Best score 183 bits
Score difference with first non-orthologous sequence - A.capsulata:183 P.pallidum:183

C0NKP8              	100.00%		D3BI16              	100.00%
                    	       		D3BS67              	26.89%
Bootstrap support for C0NKP8 as seed ortholog is 100%.
Bootstrap support for D3BI16 as seed ortholog is 100%.

Group of orthologs #1044. Best score 183 bits
Score difference with first non-orthologous sequence - A.capsulata:183 P.pallidum:183

C0NG33              	100.00%		D3B8I8              	100.00%
Bootstrap support for C0NG33 as seed ortholog is 100%.
Bootstrap support for D3B8I8 as seed ortholog is 100%.

Group of orthologs #1045. Best score 183 bits
Score difference with first non-orthologous sequence - A.capsulata:70 P.pallidum:50

C0NE92              	100.00%		D3BEU9              	100.00%
Bootstrap support for C0NE92 as seed ortholog is 99%.
Bootstrap support for D3BEU9 as seed ortholog is 98%.

Group of orthologs #1046. Best score 183 bits
Score difference with first non-orthologous sequence - A.capsulata:183 P.pallidum:183

C0NE46              	100.00%		D3BNE3              	100.00%
Bootstrap support for C0NE46 as seed ortholog is 100%.
Bootstrap support for D3BNE3 as seed ortholog is 100%.

Group of orthologs #1047. Best score 183 bits
Score difference with first non-orthologous sequence - A.capsulata:183 P.pallidum:183

C0NUG3              	100.00%		D3B8L6              	100.00%
Bootstrap support for C0NUG3 as seed ortholog is 100%.
Bootstrap support for D3B8L6 as seed ortholog is 100%.

Group of orthologs #1048. Best score 182 bits
Score difference with first non-orthologous sequence - A.capsulata:182 P.pallidum:182

C0NAN4              	100.00%		D3B8B3              	100.00%
Bootstrap support for C0NAN4 as seed ortholog is 100%.
Bootstrap support for D3B8B3 as seed ortholog is 100%.

Group of orthologs #1049. Best score 182 bits
Score difference with first non-orthologous sequence - A.capsulata:182 P.pallidum:182

C0NYC0              	100.00%		D3BCA0              	100.00%
Bootstrap support for C0NYC0 as seed ortholog is 100%.
Bootstrap support for D3BCA0 as seed ortholog is 100%.

Group of orthologs #1050. Best score 182 bits
Score difference with first non-orthologous sequence - A.capsulata:182 P.pallidum:182

C0P1C6              	100.00%		D3BA93              	100.00%
Bootstrap support for C0P1C6 as seed ortholog is 100%.
Bootstrap support for D3BA93 as seed ortholog is 100%.

Group of orthologs #1051. Best score 182 bits
Score difference with first non-orthologous sequence - A.capsulata:182 P.pallidum:1

C0NTN5              	100.00%		D3BL27              	100.00%
Bootstrap support for C0NTN5 as seed ortholog is 100%.
Bootstrap support for D3BL27 as seed ortholog is 45%.
Alternative seed ortholog is D3BJU6 (1 bits away from this cluster)

Group of orthologs #1052. Best score 181 bits
Score difference with first non-orthologous sequence - A.capsulata:181 P.pallidum:181

C0NW76              	100.00%		D3BCZ6              	100.00%
C0NEI4              	100.00%		D3B3R0              	100.00%
C0NTF7              	40.93%		D3BD24              	38.85%
Bootstrap support for C0NW76 as seed ortholog is 100%.
Bootstrap support for C0NEI4 as seed ortholog is 100%.
Bootstrap support for D3BCZ6 as seed ortholog is 100%.
Bootstrap support for D3B3R0 as seed ortholog is 100%.

Group of orthologs #1053. Best score 181 bits
Score difference with first non-orthologous sequence - A.capsulata:3 P.pallidum:117

C0NAY5              	100.00%		D3B3M6              	100.00%
                    	       		D3BGU2              	16.94%
                    	       		D3B2P9              	5.37%
Bootstrap support for C0NAY5 as seed ortholog is 54%.
Alternative seed ortholog is C0NYG4 (3 bits away from this cluster)
Bootstrap support for D3B3M6 as seed ortholog is 99%.

Group of orthologs #1054. Best score 181 bits
Score difference with first non-orthologous sequence - A.capsulata:43 P.pallidum:33

C0NF31              	100.00%		D3B2T9              	100.00%
Bootstrap support for C0NF31 as seed ortholog is 97%.
Bootstrap support for D3B2T9 as seed ortholog is 93%.

Group of orthologs #1055. Best score 181 bits
Score difference with first non-orthologous sequence - A.capsulata:181 P.pallidum:181

C0NCF2              	100.00%		D3BHR5              	100.00%
Bootstrap support for C0NCF2 as seed ortholog is 100%.
Bootstrap support for D3BHR5 as seed ortholog is 100%.

Group of orthologs #1056. Best score 181 bits
Score difference with first non-orthologous sequence - A.capsulata:181 P.pallidum:181

C0P0D6              	100.00%		D3AXK7              	100.00%
Bootstrap support for C0P0D6 as seed ortholog is 100%.
Bootstrap support for D3AXK7 as seed ortholog is 100%.

Group of orthologs #1057. Best score 181 bits
Score difference with first non-orthologous sequence - A.capsulata:181 P.pallidum:94

C0NAJ4              	100.00%		D3BTW3              	100.00%
Bootstrap support for C0NAJ4 as seed ortholog is 100%.
Bootstrap support for D3BTW3 as seed ortholog is 99%.

Group of orthologs #1058. Best score 181 bits
Score difference with first non-orthologous sequence - A.capsulata:181 P.pallidum:181

C0NSS1              	100.00%		D3BPP6              	100.00%
Bootstrap support for C0NSS1 as seed ortholog is 100%.
Bootstrap support for D3BPP6 as seed ortholog is 100%.

Group of orthologs #1059. Best score 181 bits
Score difference with first non-orthologous sequence - A.capsulata:181 P.pallidum:181

C0NTC1              	100.00%		D3BTV0              	100.00%
Bootstrap support for C0NTC1 as seed ortholog is 100%.
Bootstrap support for D3BTV0 as seed ortholog is 100%.

Group of orthologs #1060. Best score 180 bits
Score difference with first non-orthologous sequence - A.capsulata:65 P.pallidum:16

C0NIF9              	100.00%		D3B4H8              	100.00%
                    	       		D3BHC7              	26.87%
                    	       		D3BVF7              	14.51%
Bootstrap support for C0NIF9 as seed ortholog is 90%.
Bootstrap support for D3B4H8 as seed ortholog is 62%.
Alternative seed ortholog is D3BQB6 (16 bits away from this cluster)

Group of orthologs #1061. Best score 180 bits
Score difference with first non-orthologous sequence - A.capsulata:180 P.pallidum:180

C0NE77              	100.00%		D3BN47              	100.00%
Bootstrap support for C0NE77 as seed ortholog is 100%.
Bootstrap support for D3BN47 as seed ortholog is 100%.

Group of orthologs #1062. Best score 180 bits
Score difference with first non-orthologous sequence - A.capsulata:180 P.pallidum:180

C0NB46              	100.00%		D3BT27              	100.00%
Bootstrap support for C0NB46 as seed ortholog is 100%.
Bootstrap support for D3BT27 as seed ortholog is 100%.

Group of orthologs #1063. Best score 180 bits
Score difference with first non-orthologous sequence - A.capsulata:180 P.pallidum:180

C0NID8              	100.00%		D3BQE1              	100.00%
Bootstrap support for C0NID8 as seed ortholog is 100%.
Bootstrap support for D3BQE1 as seed ortholog is 100%.

Group of orthologs #1064. Best score 180 bits
Score difference with first non-orthologous sequence - A.capsulata:180 P.pallidum:180

C0NP77              	100.00%		D3BNE7              	100.00%
Bootstrap support for C0NP77 as seed ortholog is 100%.
Bootstrap support for D3BNE7 as seed ortholog is 100%.

Group of orthologs #1065. Best score 180 bits
Score difference with first non-orthologous sequence - A.capsulata:180 P.pallidum:180

C0NZY6              	100.00%		D3BG97              	100.00%
Bootstrap support for C0NZY6 as seed ortholog is 100%.
Bootstrap support for D3BG97 as seed ortholog is 100%.

Group of orthologs #1066. Best score 179 bits
Score difference with first non-orthologous sequence - A.capsulata:179 P.pallidum:179

C0NY91              	100.00%		D3BGC3              	100.00%
Bootstrap support for C0NY91 as seed ortholog is 100%.
Bootstrap support for D3BGC3 as seed ortholog is 100%.

Group of orthologs #1067. Best score 178 bits
Score difference with first non-orthologous sequence - A.capsulata:34 P.pallidum:82

C0NU03              	100.00%		D3BJU4              	100.00%
                    	       		D3BAU0              	28.25%
Bootstrap support for C0NU03 as seed ortholog is 73%.
Alternative seed ortholog is C0NWZ8 (34 bits away from this cluster)
Bootstrap support for D3BJU4 as seed ortholog is 99%.

Group of orthologs #1068. Best score 178 bits
Score difference with first non-orthologous sequence - A.capsulata:178 P.pallidum:178

C0NC15              	100.00%		D3B513              	100.00%
Bootstrap support for C0NC15 as seed ortholog is 100%.
Bootstrap support for D3B513 as seed ortholog is 100%.

Group of orthologs #1069. Best score 178 bits
Score difference with first non-orthologous sequence - A.capsulata:75 P.pallidum:178

C0NE27              	100.00%		D3BCJ7              	100.00%
Bootstrap support for C0NE27 as seed ortholog is 93%.
Bootstrap support for D3BCJ7 as seed ortholog is 100%.

Group of orthologs #1070. Best score 178 bits
Score difference with first non-orthologous sequence - A.capsulata:79 P.pallidum:178

C0NTB2              	100.00%		D3BC96              	100.00%
Bootstrap support for C0NTB2 as seed ortholog is 99%.
Bootstrap support for D3BC96 as seed ortholog is 100%.

Group of orthologs #1071. Best score 178 bits
Score difference with first non-orthologous sequence - A.capsulata:178 P.pallidum:178

C0NQJ2              	100.00%		D3BGD8              	100.00%
Bootstrap support for C0NQJ2 as seed ortholog is 100%.
Bootstrap support for D3BGD8 as seed ortholog is 100%.

Group of orthologs #1072. Best score 178 bits
Score difference with first non-orthologous sequence - A.capsulata:178 P.pallidum:178

C0NTS7              	100.00%		D3BIY8              	100.00%
Bootstrap support for C0NTS7 as seed ortholog is 100%.
Bootstrap support for D3BIY8 as seed ortholog is 100%.

Group of orthologs #1073. Best score 178 bits
Score difference with first non-orthologous sequence - A.capsulata:178 P.pallidum:178

C0NP80              	100.00%		D3BQJ3              	100.00%
Bootstrap support for C0NP80 as seed ortholog is 100%.
Bootstrap support for D3BQJ3 as seed ortholog is 100%.

Group of orthologs #1074. Best score 178 bits
Score difference with first non-orthologous sequence - A.capsulata:178 P.pallidum:178

C0P069              	100.00%		D3BJY4              	100.00%
Bootstrap support for C0P069 as seed ortholog is 100%.
Bootstrap support for D3BJY4 as seed ortholog is 100%.

Group of orthologs #1075. Best score 178 bits
Score difference with first non-orthologous sequence - A.capsulata:178 P.pallidum:178

C0P0Z6              	100.00%		D3BJR7              	100.00%
Bootstrap support for C0P0Z6 as seed ortholog is 100%.
Bootstrap support for D3BJR7 as seed ortholog is 100%.

Group of orthologs #1076. Best score 177 bits
Score difference with first non-orthologous sequence - A.capsulata:177 P.pallidum:177

C0NH00              	100.00%		D3B010              	100.00%
Bootstrap support for C0NH00 as seed ortholog is 100%.
Bootstrap support for D3B010 as seed ortholog is 100%.

Group of orthologs #1077. Best score 177 bits
Score difference with first non-orthologous sequence - A.capsulata:177 P.pallidum:177

C0NW86              	100.00%		D3AXC6              	100.00%
Bootstrap support for C0NW86 as seed ortholog is 100%.
Bootstrap support for D3AXC6 as seed ortholog is 100%.

Group of orthologs #1078. Best score 177 bits
Score difference with first non-orthologous sequence - A.capsulata:177 P.pallidum:177

C0NZB7              	100.00%		D3BAC6              	100.00%
Bootstrap support for C0NZB7 as seed ortholog is 100%.
Bootstrap support for D3BAC6 as seed ortholog is 100%.

Group of orthologs #1079. Best score 177 bits
Score difference with first non-orthologous sequence - A.capsulata:177 P.pallidum:177

C0NVE6              	100.00%		D3BHJ3              	100.00%
Bootstrap support for C0NVE6 as seed ortholog is 100%.
Bootstrap support for D3BHJ3 as seed ortholog is 100%.

Group of orthologs #1080. Best score 176 bits
Score difference with first non-orthologous sequence - A.capsulata:176 P.pallidum:17

C0NZ06              	100.00%		D3AWS1              	100.00%
C0NG89              	8.95%		D3BNZ9              	36.26%
                    	       		D3BP12              	35.86%
                    	       		D3B9W6              	25.25%
                    	       		D3B3L5              	22.87%
Bootstrap support for C0NZ06 as seed ortholog is 100%.
Bootstrap support for D3AWS1 as seed ortholog is 85%.

Group of orthologs #1081. Best score 176 bits
Score difference with first non-orthologous sequence - A.capsulata:103 P.pallidum:176

C0NRX5              	100.00%		D3B5V0              	100.00%
C0NHQ1              	32.10%		D3BT95              	50.70%
C0NUB2              	25.49%		D3B0Y5              	40.82%
Bootstrap support for C0NRX5 as seed ortholog is 96%.
Bootstrap support for D3B5V0 as seed ortholog is 100%.

Group of orthologs #1082. Best score 176 bits
Score difference with first non-orthologous sequence - A.capsulata:43 P.pallidum:21

C0NBE1              	100.00%		D3B6H5              	100.00%
                    	       		D3B8N7              	14.68%
                    	       		D3B373              	5.32%
Bootstrap support for C0NBE1 as seed ortholog is 84%.
Bootstrap support for D3B6H5 as seed ortholog is 67%.
Alternative seed ortholog is D3B5B2 (21 bits away from this cluster)

Group of orthologs #1083. Best score 176 bits
Score difference with first non-orthologous sequence - A.capsulata:176 P.pallidum:176

C0NCD4              	100.00%		D3B7W1              	100.00%
Bootstrap support for C0NCD4 as seed ortholog is 100%.
Bootstrap support for D3B7W1 as seed ortholog is 100%.

Group of orthologs #1084. Best score 176 bits
Score difference with first non-orthologous sequence - A.capsulata:176 P.pallidum:95

C0NE54              	100.00%		D3BGC7              	100.00%
Bootstrap support for C0NE54 as seed ortholog is 100%.
Bootstrap support for D3BGC7 as seed ortholog is 99%.

Group of orthologs #1085. Best score 176 bits
Score difference with first non-orthologous sequence - A.capsulata:176 P.pallidum:176

C0NPH5              	100.00%		D3B6L2              	100.00%
Bootstrap support for C0NPH5 as seed ortholog is 100%.
Bootstrap support for D3B6L2 as seed ortholog is 100%.

Group of orthologs #1086. Best score 176 bits
Score difference with first non-orthologous sequence - A.capsulata:176 P.pallidum:176

C0NVF9              	100.00%		D3BCE9              	100.00%
Bootstrap support for C0NVF9 as seed ortholog is 100%.
Bootstrap support for D3BCE9 as seed ortholog is 100%.

Group of orthologs #1087. Best score 176 bits
Score difference with first non-orthologous sequence - A.capsulata:176 P.pallidum:176

C0NZ36              	100.00%		D3BNC9              	100.00%
Bootstrap support for C0NZ36 as seed ortholog is 100%.
Bootstrap support for D3BNC9 as seed ortholog is 100%.

Group of orthologs #1088. Best score 175 bits
Score difference with first non-orthologous sequence - A.capsulata:175 P.pallidum:175

C0NFZ2              	100.00%		D3BM71              	100.00%
                    	       		D3B665              	37.80%
                    	       		D3BT74              	35.61%
                    	       		D3BT94              	35.12%
                    	       		D3AY26              	22.93%
Bootstrap support for C0NFZ2 as seed ortholog is 100%.
Bootstrap support for D3BM71 as seed ortholog is 100%.

Group of orthologs #1089. Best score 175 bits
Score difference with first non-orthologous sequence - A.capsulata:175 P.pallidum:175

C0NVG2              	100.00%		D3B0P4              	100.00%
C0NHC6              	33.60%		D3B0S8              	78.55%
C0NTK2              	5.71%		
Bootstrap support for C0NVG2 as seed ortholog is 100%.
Bootstrap support for D3B0P4 as seed ortholog is 100%.

Group of orthologs #1090. Best score 175 bits
Score difference with first non-orthologous sequence - A.capsulata:175 P.pallidum:175

C0NAH4              	100.00%		D3B2F2              	100.00%
Bootstrap support for C0NAH4 as seed ortholog is 100%.
Bootstrap support for D3B2F2 as seed ortholog is 100%.

Group of orthologs #1091. Best score 175 bits
Score difference with first non-orthologous sequence - A.capsulata:119 P.pallidum:175

C0NE95              	100.00%		D3B1H2              	100.00%
Bootstrap support for C0NE95 as seed ortholog is 100%.
Bootstrap support for D3B1H2 as seed ortholog is 100%.

Group of orthologs #1092. Best score 175 bits
Score difference with first non-orthologous sequence - A.capsulata:175 P.pallidum:175

C0NHF6              	100.00%		D3BGG2              	100.00%
Bootstrap support for C0NHF6 as seed ortholog is 100%.
Bootstrap support for D3BGG2 as seed ortholog is 100%.

Group of orthologs #1093. Best score 175 bits
Score difference with first non-orthologous sequence - A.capsulata:175 P.pallidum:175

C0NFM3              	100.00%		D3BJY9              	100.00%
Bootstrap support for C0NFM3 as seed ortholog is 100%.
Bootstrap support for D3BJY9 as seed ortholog is 100%.

Group of orthologs #1094. Best score 175 bits
Score difference with first non-orthologous sequence - A.capsulata:53 P.pallidum:36

C0NW21              	100.00%		D3B840              	100.00%
Bootstrap support for C0NW21 as seed ortholog is 73%.
Alternative seed ortholog is C0NPH4 (53 bits away from this cluster)
Bootstrap support for D3B840 as seed ortholog is 93%.

Group of orthologs #1095. Best score 175 bits
Score difference with first non-orthologous sequence - A.capsulata:175 P.pallidum:175

C0NMC5              	100.00%		D3BL93              	100.00%
Bootstrap support for C0NMC5 as seed ortholog is 100%.
Bootstrap support for D3BL93 as seed ortholog is 100%.

Group of orthologs #1096. Best score 174 bits
Score difference with first non-orthologous sequence - A.capsulata:174 P.pallidum:174

C0NG91              	100.00%		D3B6U0              	100.00%
Bootstrap support for C0NG91 as seed ortholog is 100%.
Bootstrap support for D3B6U0 as seed ortholog is 100%.

Group of orthologs #1097. Best score 174 bits
Score difference with first non-orthologous sequence - A.capsulata:81 P.pallidum:174

C0NWB4              	100.00%		D3B264              	100.00%
Bootstrap support for C0NWB4 as seed ortholog is 97%.
Bootstrap support for D3B264 as seed ortholog is 100%.

Group of orthologs #1098. Best score 174 bits
Score difference with first non-orthologous sequence - A.capsulata:174 P.pallidum:174

C0NIS3              	100.00%		D3BKT0              	100.00%
Bootstrap support for C0NIS3 as seed ortholog is 100%.
Bootstrap support for D3BKT0 as seed ortholog is 100%.

Group of orthologs #1099. Best score 173 bits
Score difference with first non-orthologous sequence - A.capsulata:173 P.pallidum:173

C0NBP4              	100.00%		D3AWU6              	100.00%
                    	       		D3AWU5              	34.26%
Bootstrap support for C0NBP4 as seed ortholog is 100%.
Bootstrap support for D3AWU6 as seed ortholog is 100%.

Group of orthologs #1100. Best score 173 bits
Score difference with first non-orthologous sequence - A.capsulata:60 P.pallidum:33

C0ND61              	100.00%		D3BBP7              	100.00%
Bootstrap support for C0ND61 as seed ortholog is 90%.
Bootstrap support for D3BBP7 as seed ortholog is 98%.

Group of orthologs #1101. Best score 173 bits
Score difference with first non-orthologous sequence - A.capsulata:173 P.pallidum:173

C0NJF2              	100.00%		D3BJY8              	100.00%
Bootstrap support for C0NJF2 as seed ortholog is 100%.
Bootstrap support for D3BJY8 as seed ortholog is 100%.

Group of orthologs #1102. Best score 173 bits
Score difference with first non-orthologous sequence - A.capsulata:173 P.pallidum:173

C0NMW7              	100.00%		D3BQA1              	100.00%
Bootstrap support for C0NMW7 as seed ortholog is 100%.
Bootstrap support for D3BQA1 as seed ortholog is 100%.

Group of orthologs #1103. Best score 173 bits
Score difference with first non-orthologous sequence - A.capsulata:173 P.pallidum:47

C0NZZ9              	100.00%		D3BK33              	100.00%
Bootstrap support for C0NZZ9 as seed ortholog is 100%.
Bootstrap support for D3BK33 as seed ortholog is 91%.

Group of orthologs #1104. Best score 173 bits
Score difference with first non-orthologous sequence - A.capsulata:173 P.pallidum:173

C0NXT6              	100.00%		D3BNZ2              	100.00%
Bootstrap support for C0NXT6 as seed ortholog is 100%.
Bootstrap support for D3BNZ2 as seed ortholog is 100%.

Group of orthologs #1105. Best score 172 bits
Score difference with first non-orthologous sequence - A.capsulata:172 P.pallidum:172

C0NAT3              	100.00%		D3AVU9              	100.00%
Bootstrap support for C0NAT3 as seed ortholog is 100%.
Bootstrap support for D3AVU9 as seed ortholog is 100%.

Group of orthologs #1106. Best score 172 bits
Score difference with first non-orthologous sequence - A.capsulata:172 P.pallidum:172

C0NL50              	100.00%		D3AVH8              	100.00%
Bootstrap support for C0NL50 as seed ortholog is 100%.
Bootstrap support for D3AVH8 as seed ortholog is 100%.

Group of orthologs #1107. Best score 172 bits
Score difference with first non-orthologous sequence - A.capsulata:172 P.pallidum:172

C0NG14              	100.00%		D3B432              	100.00%
Bootstrap support for C0NG14 as seed ortholog is 100%.
Bootstrap support for D3B432 as seed ortholog is 100%.

Group of orthologs #1108. Best score 172 bits
Score difference with first non-orthologous sequence - A.capsulata:172 P.pallidum:172

C0NBT2              	100.00%		D3BKG2              	100.00%
Bootstrap support for C0NBT2 as seed ortholog is 100%.
Bootstrap support for D3BKG2 as seed ortholog is 100%.

Group of orthologs #1109. Best score 172 bits
Score difference with first non-orthologous sequence - A.capsulata:172 P.pallidum:172

C0NJL8              	100.00%		D3BHU1              	100.00%
Bootstrap support for C0NJL8 as seed ortholog is 100%.
Bootstrap support for D3BHU1 as seed ortholog is 100%.

Group of orthologs #1110. Best score 172 bits
Score difference with first non-orthologous sequence - A.capsulata:172 P.pallidum:172

C0NME2              	100.00%		D3BIE2              	100.00%
Bootstrap support for C0NME2 as seed ortholog is 100%.
Bootstrap support for D3BIE2 as seed ortholog is 100%.

Group of orthologs #1111. Best score 172 bits
Score difference with first non-orthologous sequence - A.capsulata:102 P.pallidum:172

C0NR72              	100.00%		D3BEQ8              	100.00%
Bootstrap support for C0NR72 as seed ortholog is 99%.
Bootstrap support for D3BEQ8 as seed ortholog is 100%.

Group of orthologs #1112. Best score 171 bits
Score difference with first non-orthologous sequence - A.capsulata:171 P.pallidum:171

C0NMD1              	100.00%		D3B8C9              	100.00%
                    	       		D3BSZ1              	11.43%
                    	       		D3BGI1              	10.69%
Bootstrap support for C0NMD1 as seed ortholog is 100%.
Bootstrap support for D3B8C9 as seed ortholog is 100%.

Group of orthologs #1113. Best score 171 bits
Score difference with first non-orthologous sequence - A.capsulata:57 P.pallidum:5

C0P162              	100.00%		D3AVN2              	100.00%
Bootstrap support for C0P162 as seed ortholog is 90%.
Bootstrap support for D3AVN2 as seed ortholog is 53%.
Alternative seed ortholog is D3BHL0 (5 bits away from this cluster)

Group of orthologs #1114. Best score 171 bits
Score difference with first non-orthologous sequence - A.capsulata:171 P.pallidum:171

C0NR82              	100.00%		D3B5T8              	100.00%
Bootstrap support for C0NR82 as seed ortholog is 100%.
Bootstrap support for D3B5T8 as seed ortholog is 100%.

Group of orthologs #1115. Best score 171 bits
Score difference with first non-orthologous sequence - A.capsulata:171 P.pallidum:89

C0NVF1              	100.00%		D3B352              	100.00%
Bootstrap support for C0NVF1 as seed ortholog is 100%.
Bootstrap support for D3B352 as seed ortholog is 99%.

Group of orthologs #1116. Best score 171 bits
Score difference with first non-orthologous sequence - A.capsulata:23 P.pallidum:49

C0P0C8              	100.00%		D3B5D6              	100.00%
Bootstrap support for C0P0C8 as seed ortholog is 66%.
Alternative seed ortholog is C0NC48 (23 bits away from this cluster)
Bootstrap support for D3B5D6 as seed ortholog is 89%.

Group of orthologs #1117. Best score 171 bits
Score difference with first non-orthologous sequence - A.capsulata:5 P.pallidum:68

C0NM42              	100.00%		D3BPQ9              	100.00%
Bootstrap support for C0NM42 as seed ortholog is 46%.
Alternative seed ortholog is C0NKS9 (5 bits away from this cluster)
Bootstrap support for D3BPQ9 as seed ortholog is 88%.

Group of orthologs #1118. Best score 171 bits
Score difference with first non-orthologous sequence - A.capsulata:67 P.pallidum:171

C0NW48              	100.00%		D3BVD2              	100.00%
Bootstrap support for C0NW48 as seed ortholog is 93%.
Bootstrap support for D3BVD2 as seed ortholog is 100%.

Group of orthologs #1119. Best score 170 bits
Score difference with first non-orthologous sequence - A.capsulata:170 P.pallidum:109

C0NH53              	100.00%		D3BEA5              	100.00%
C0P0X9              	6.20%		
Bootstrap support for C0NH53 as seed ortholog is 100%.
Bootstrap support for D3BEA5 as seed ortholog is 99%.

Group of orthologs #1120. Best score 170 bits
Score difference with first non-orthologous sequence - A.capsulata:170 P.pallidum:170

C0NCS0              	100.00%		D3AXV6              	100.00%
Bootstrap support for C0NCS0 as seed ortholog is 100%.
Bootstrap support for D3AXV6 as seed ortholog is 100%.

Group of orthologs #1121. Best score 170 bits
Score difference with first non-orthologous sequence - A.capsulata:107 P.pallidum:170

C0NFK3              	100.00%		D3B5D0              	100.00%
Bootstrap support for C0NFK3 as seed ortholog is 99%.
Bootstrap support for D3B5D0 as seed ortholog is 100%.

Group of orthologs #1122. Best score 170 bits
Score difference with first non-orthologous sequence - A.capsulata:170 P.pallidum:170

C0NK89              	100.00%		D3BC80              	100.00%
Bootstrap support for C0NK89 as seed ortholog is 100%.
Bootstrap support for D3BC80 as seed ortholog is 100%.

Group of orthologs #1123. Best score 170 bits
Score difference with first non-orthologous sequence - A.capsulata:170 P.pallidum:170

C0NGZ1              	100.00%		D3BLJ3              	100.00%
Bootstrap support for C0NGZ1 as seed ortholog is 100%.
Bootstrap support for D3BLJ3 as seed ortholog is 100%.

Group of orthologs #1124. Best score 169 bits
Score difference with first non-orthologous sequence - A.capsulata:169 P.pallidum:169

C0NE16              	100.00%		D3B7B4              	100.00%
                    	       		D3B1M9              	9.38%
Bootstrap support for C0NE16 as seed ortholog is 100%.
Bootstrap support for D3B7B4 as seed ortholog is 100%.

Group of orthologs #1125. Best score 169 bits
Score difference with first non-orthologous sequence - A.capsulata:169 P.pallidum:169

C0NKB8              	100.00%		D3B1Y0              	100.00%
Bootstrap support for C0NKB8 as seed ortholog is 100%.
Bootstrap support for D3B1Y0 as seed ortholog is 100%.

Group of orthologs #1126. Best score 169 bits
Score difference with first non-orthologous sequence - A.capsulata:169 P.pallidum:169

C0NP15              	100.00%		D3B8W7              	100.00%
Bootstrap support for C0NP15 as seed ortholog is 100%.
Bootstrap support for D3B8W7 as seed ortholog is 100%.

Group of orthologs #1127. Best score 169 bits
Score difference with first non-orthologous sequence - A.capsulata:169 P.pallidum:169

C0NZY3              	100.00%		D3B0W4              	100.00%
Bootstrap support for C0NZY3 as seed ortholog is 100%.
Bootstrap support for D3B0W4 as seed ortholog is 100%.

Group of orthologs #1128. Best score 168 bits
Score difference with first non-orthologous sequence - A.capsulata:168 P.pallidum:168

C0NK47              	100.00%		D3B271              	100.00%
C0NJZ6              	50.67%		
Bootstrap support for C0NK47 as seed ortholog is 100%.
Bootstrap support for D3B271 as seed ortholog is 100%.

Group of orthologs #1129. Best score 168 bits
Score difference with first non-orthologous sequence - A.capsulata:168 P.pallidum:168

C0NIC5              	100.00%		D3B312              	100.00%
Bootstrap support for C0NIC5 as seed ortholog is 100%.
Bootstrap support for D3B312 as seed ortholog is 100%.

Group of orthologs #1130. Best score 168 bits
Score difference with first non-orthologous sequence - A.capsulata:168 P.pallidum:168

C0NL65              	100.00%		D3B0W5              	100.00%
Bootstrap support for C0NL65 as seed ortholog is 100%.
Bootstrap support for D3B0W5 as seed ortholog is 100%.

Group of orthologs #1131. Best score 168 bits
Score difference with first non-orthologous sequence - A.capsulata:168 P.pallidum:168

C0NTZ2              	100.00%		D3AVW2              	100.00%
Bootstrap support for C0NTZ2 as seed ortholog is 100%.
Bootstrap support for D3AVW2 as seed ortholog is 100%.

Group of orthologs #1132. Best score 168 bits
Score difference with first non-orthologous sequence - A.capsulata:168 P.pallidum:52

C0NYD7              	100.00%		D3BH99              	100.00%
Bootstrap support for C0NYD7 as seed ortholog is 100%.
Bootstrap support for D3BH99 as seed ortholog is 99%.

Group of orthologs #1133. Best score 167 bits
Score difference with first non-orthologous sequence - A.capsulata:92 P.pallidum:61

C0NXS6              	100.00%		D3B773              	100.00%
C0NW75              	34.51%		
C0NSB6              	26.53%		
Bootstrap support for C0NXS6 as seed ortholog is 98%.
Bootstrap support for D3B773 as seed ortholog is 89%.

Group of orthologs #1134. Best score 167 bits
Score difference with first non-orthologous sequence - A.capsulata:167 P.pallidum:167

C0NR87              	100.00%		D3B088              	100.00%
Bootstrap support for C0NR87 as seed ortholog is 100%.
Bootstrap support for D3B088 as seed ortholog is 100%.

Group of orthologs #1135. Best score 167 bits
Score difference with first non-orthologous sequence - A.capsulata:167 P.pallidum:167

C0NEH2              	100.00%		D3BH71              	100.00%
Bootstrap support for C0NEH2 as seed ortholog is 100%.
Bootstrap support for D3BH71 as seed ortholog is 100%.

Group of orthologs #1136. Best score 167 bits
Score difference with first non-orthologous sequence - A.capsulata:167 P.pallidum:167

C0NWW6              	100.00%		D3BCC3              	100.00%
Bootstrap support for C0NWW6 as seed ortholog is 100%.
Bootstrap support for D3BCC3 as seed ortholog is 100%.

Group of orthologs #1137. Best score 167 bits
Score difference with first non-orthologous sequence - A.capsulata:167 P.pallidum:167

C0NSD7              	100.00%		D3BPW1              	100.00%
Bootstrap support for C0NSD7 as seed ortholog is 100%.
Bootstrap support for D3BPW1 as seed ortholog is 100%.

Group of orthologs #1138. Best score 167 bits
Score difference with first non-orthologous sequence - A.capsulata:64 P.pallidum:110

C0NYZ9              	100.00%		D3BNI9              	100.00%
Bootstrap support for C0NYZ9 as seed ortholog is 94%.
Bootstrap support for D3BNI9 as seed ortholog is 99%.

Group of orthologs #1139. Best score 166 bits
Score difference with first non-orthologous sequence - A.capsulata:3 P.pallidum:94

C0NZE9              	100.00%		D3AWZ0              	100.00%
C0NA62              	46.89%		
Bootstrap support for C0NZE9 as seed ortholog is 53%.
Alternative seed ortholog is C0NLI9 (3 bits away from this cluster)
Bootstrap support for D3AWZ0 as seed ortholog is 99%.

Group of orthologs #1140. Best score 166 bits
Score difference with first non-orthologous sequence - A.capsulata:45 P.pallidum:166

C0NKN3              	100.00%		D3BJZ1              	100.00%
                    	       		D3BH57              	40.30%
Bootstrap support for C0NKN3 as seed ortholog is 83%.
Bootstrap support for D3BJZ1 as seed ortholog is 100%.

Group of orthologs #1141. Best score 166 bits
Score difference with first non-orthologous sequence - A.capsulata:166 P.pallidum:166

C0NMP8              	100.00%		D3B465              	100.00%
Bootstrap support for C0NMP8 as seed ortholog is 100%.
Bootstrap support for D3B465 as seed ortholog is 100%.

Group of orthologs #1142. Best score 166 bits
Score difference with first non-orthologous sequence - A.capsulata:166 P.pallidum:166

C0NLI8              	100.00%		D3B8R1              	100.00%
Bootstrap support for C0NLI8 as seed ortholog is 100%.
Bootstrap support for D3B8R1 as seed ortholog is 100%.

Group of orthologs #1143. Best score 166 bits
Score difference with first non-orthologous sequence - A.capsulata:166 P.pallidum:166

C0NUN7              	100.00%		D3B1A8              	100.00%
Bootstrap support for C0NUN7 as seed ortholog is 100%.
Bootstrap support for D3B1A8 as seed ortholog is 100%.

Group of orthologs #1144. Best score 166 bits
Score difference with first non-orthologous sequence - A.capsulata:94 P.pallidum:75

C0NLC0              	100.00%		D3BEA8              	100.00%
Bootstrap support for C0NLC0 as seed ortholog is 99%.
Bootstrap support for D3BEA8 as seed ortholog is 98%.

Group of orthologs #1145. Best score 166 bits
Score difference with first non-orthologous sequence - A.capsulata:166 P.pallidum:166

C0NJZ3              	100.00%		D3BGE8              	100.00%
Bootstrap support for C0NJZ3 as seed ortholog is 100%.
Bootstrap support for D3BGE8 as seed ortholog is 100%.

Group of orthologs #1146. Best score 166 bits
Score difference with first non-orthologous sequence - A.capsulata:166 P.pallidum:166

C0P147              	100.00%		D3B0F6              	100.00%
Bootstrap support for C0P147 as seed ortholog is 100%.
Bootstrap support for D3B0F6 as seed ortholog is 100%.

Group of orthologs #1147. Best score 166 bits
Score difference with first non-orthologous sequence - A.capsulata:166 P.pallidum:166

C0NW29              	100.00%		D3B963              	100.00%
Bootstrap support for C0NW29 as seed ortholog is 100%.
Bootstrap support for D3B963 as seed ortholog is 100%.

Group of orthologs #1148. Best score 166 bits
Score difference with first non-orthologous sequence - A.capsulata:166 P.pallidum:166

C0NEV3              	100.00%		D3BQF7              	100.00%
Bootstrap support for C0NEV3 as seed ortholog is 100%.
Bootstrap support for D3BQF7 as seed ortholog is 100%.

Group of orthologs #1149. Best score 165 bits
Score difference with first non-orthologous sequence - A.capsulata:90 P.pallidum:165

C0NJ93              	100.00%		D3AVG3              	100.00%
Bootstrap support for C0NJ93 as seed ortholog is 98%.
Bootstrap support for D3AVG3 as seed ortholog is 100%.

Group of orthologs #1150. Best score 165 bits
Score difference with first non-orthologous sequence - A.capsulata:111 P.pallidum:115

C0NJK1              	100.00%		D3B238              	100.00%
Bootstrap support for C0NJK1 as seed ortholog is 99%.
Bootstrap support for D3B238 as seed ortholog is 99%.

Group of orthologs #1151. Best score 165 bits
Score difference with first non-orthologous sequence - A.capsulata:165 P.pallidum:110

C0NE99              	100.00%		D3BQQ3              	100.00%
Bootstrap support for C0NE99 as seed ortholog is 100%.
Bootstrap support for D3BQQ3 as seed ortholog is 97%.

Group of orthologs #1152. Best score 165 bits
Score difference with first non-orthologous sequence - A.capsulata:91 P.pallidum:165

C0NLG1              	100.00%		D3BM05              	100.00%
Bootstrap support for C0NLG1 as seed ortholog is 98%.
Bootstrap support for D3BM05 as seed ortholog is 100%.

Group of orthologs #1153. Best score 164 bits
Score difference with first non-orthologous sequence - A.capsulata:39 P.pallidum:164

C0NDA7              	100.00%		D3AZJ0              	100.00%
Bootstrap support for C0NDA7 as seed ortholog is 85%.
Bootstrap support for D3AZJ0 as seed ortholog is 100%.

Group of orthologs #1154. Best score 164 bits
Score difference with first non-orthologous sequence - A.capsulata:164 P.pallidum:164

C0NJW8              	100.00%		D3B7S7              	100.00%
Bootstrap support for C0NJW8 as seed ortholog is 100%.
Bootstrap support for D3B7S7 as seed ortholog is 100%.

Group of orthologs #1155. Best score 164 bits
Score difference with first non-orthologous sequence - A.capsulata:164 P.pallidum:164

C0NTM9              	100.00%		D3B3D8              	100.00%
Bootstrap support for C0NTM9 as seed ortholog is 100%.
Bootstrap support for D3B3D8 as seed ortholog is 100%.

Group of orthologs #1156. Best score 163 bits
Score difference with first non-orthologous sequence - A.capsulata:163 P.pallidum:163

C0NCS7              	100.00%		D3B1L8              	100.00%
Bootstrap support for C0NCS7 as seed ortholog is 100%.
Bootstrap support for D3B1L8 as seed ortholog is 100%.

Group of orthologs #1157. Best score 163 bits
Score difference with first non-orthologous sequence - A.capsulata:163 P.pallidum:163

C0NFV8              	100.00%		D3B437              	100.00%
Bootstrap support for C0NFV8 as seed ortholog is 100%.
Bootstrap support for D3B437 as seed ortholog is 100%.

Group of orthologs #1158. Best score 163 bits
Score difference with first non-orthologous sequence - A.capsulata:163 P.pallidum:163

C0NHX8              	100.00%		D3B586              	100.00%
Bootstrap support for C0NHX8 as seed ortholog is 100%.
Bootstrap support for D3B586 as seed ortholog is 100%.

Group of orthologs #1159. Best score 163 bits
Score difference with first non-orthologous sequence - A.capsulata:163 P.pallidum:163

C0NNW7              	100.00%		D3B4F5              	100.00%
Bootstrap support for C0NNW7 as seed ortholog is 100%.
Bootstrap support for D3B4F5 as seed ortholog is 100%.

Group of orthologs #1160. Best score 163 bits
Score difference with first non-orthologous sequence - A.capsulata:163 P.pallidum:163

C0NMF6              	100.00%		D3BBP3              	100.00%
Bootstrap support for C0NMF6 as seed ortholog is 100%.
Bootstrap support for D3BBP3 as seed ortholog is 100%.

Group of orthologs #1161. Best score 162 bits
Score difference with first non-orthologous sequence - A.capsulata:42 P.pallidum:23

C0NQG0              	100.00%		D3B9A4              	100.00%
                    	       		D3B9V0              	9.03%
                    	       		D3B9V1              	9.03%
                    	       		D3B9L8              	8.37%
                    	       		D3BRE3              	8.15%
                    	       		D3B9L0              	7.49%
                    	       		D3BFH8              	7.49%
                    	       		D3BRE4              	7.49%
                    	       		D3BGA3              	7.27%
                    	       		D3BD65              	6.83%
                    	       		D3BDQ2              	6.39%
                    	       		D3BFI0              	6.39%
                    	       		D3BPQ8              	6.39%
                    	       		D3AZ69              	5.29%
Bootstrap support for C0NQG0 as seed ortholog is 86%.
Bootstrap support for D3B9A4 as seed ortholog is 75%.

Group of orthologs #1162. Best score 162 bits
Score difference with first non-orthologous sequence - A.capsulata:162 P.pallidum:162

C0NCX7              	100.00%		D3BFI7              	100.00%
                    	       		D3BM72              	5.73%
Bootstrap support for C0NCX7 as seed ortholog is 100%.
Bootstrap support for D3BFI7 as seed ortholog is 100%.

Group of orthologs #1163. Best score 162 bits
Score difference with first non-orthologous sequence - A.capsulata:93 P.pallidum:162

C0NN24              	100.00%		D3B0G4              	100.00%
Bootstrap support for C0NN24 as seed ortholog is 98%.
Bootstrap support for D3B0G4 as seed ortholog is 100%.

Group of orthologs #1164. Best score 162 bits
Score difference with first non-orthologous sequence - A.capsulata:162 P.pallidum:78

C0NQU7              	100.00%		D3B645              	100.00%
Bootstrap support for C0NQU7 as seed ortholog is 100%.
Bootstrap support for D3B645 as seed ortholog is 98%.

Group of orthologs #1165. Best score 162 bits
Score difference with first non-orthologous sequence - A.capsulata:162 P.pallidum:162

C0NTP5              	100.00%		D3B4P8              	100.00%
Bootstrap support for C0NTP5 as seed ortholog is 100%.
Bootstrap support for D3B4P8 as seed ortholog is 100%.

Group of orthologs #1166. Best score 162 bits
Score difference with first non-orthologous sequence - A.capsulata:162 P.pallidum:162

C0NBC4              	100.00%		D3BQV6              	100.00%
Bootstrap support for C0NBC4 as seed ortholog is 100%.
Bootstrap support for D3BQV6 as seed ortholog is 100%.

Group of orthologs #1167. Best score 162 bits
Score difference with first non-orthologous sequence - A.capsulata:162 P.pallidum:162

C0NUL8              	100.00%		D3BHL3              	100.00%
Bootstrap support for C0NUL8 as seed ortholog is 100%.
Bootstrap support for D3BHL3 as seed ortholog is 100%.

Group of orthologs #1168. Best score 161 bits
Score difference with first non-orthologous sequence - A.capsulata:161 P.pallidum:161

C0NG80              	100.00%		D3AWA1              	100.00%
Bootstrap support for C0NG80 as seed ortholog is 100%.
Bootstrap support for D3AWA1 as seed ortholog is 100%.

Group of orthologs #1169. Best score 161 bits
Score difference with first non-orthologous sequence - A.capsulata:161 P.pallidum:161

C0NUG7              	100.00%		D3B2G2              	100.00%
Bootstrap support for C0NUG7 as seed ortholog is 100%.
Bootstrap support for D3B2G2 as seed ortholog is 100%.

Group of orthologs #1170. Best score 161 bits
Score difference with first non-orthologous sequence - A.capsulata:161 P.pallidum:161

C0NRM1              	100.00%		D3B7M1              	100.00%
Bootstrap support for C0NRM1 as seed ortholog is 100%.
Bootstrap support for D3B7M1 as seed ortholog is 100%.

Group of orthologs #1171. Best score 161 bits
Score difference with first non-orthologous sequence - A.capsulata:161 P.pallidum:161

C0NWG8              	100.00%		D3BCB9              	100.00%
Bootstrap support for C0NWG8 as seed ortholog is 100%.
Bootstrap support for D3BCB9 as seed ortholog is 100%.

Group of orthologs #1172. Best score 161 bits
Score difference with first non-orthologous sequence - A.capsulata:161 P.pallidum:161

C0NRR6              	100.00%		D3BKB6              	100.00%
Bootstrap support for C0NRR6 as seed ortholog is 100%.
Bootstrap support for D3BKB6 as seed ortholog is 100%.

Group of orthologs #1173. Best score 161 bits
Score difference with first non-orthologous sequence - A.capsulata:161 P.pallidum:161

C0NQR6              	100.00%		D3BMQ1              	100.00%
Bootstrap support for C0NQR6 as seed ortholog is 100%.
Bootstrap support for D3BMQ1 as seed ortholog is 100%.

Group of orthologs #1174. Best score 161 bits
Score difference with first non-orthologous sequence - A.capsulata:161 P.pallidum:161

C0NZI0              	100.00%		D3BHK8              	100.00%
Bootstrap support for C0NZI0 as seed ortholog is 100%.
Bootstrap support for D3BHK8 as seed ortholog is 100%.

Group of orthologs #1175. Best score 161 bits
Score difference with first non-orthologous sequence - A.capsulata:76 P.pallidum:78

C0NQP9              	100.00%		D3BTD3              	100.00%
Bootstrap support for C0NQP9 as seed ortholog is 92%.
Bootstrap support for D3BTD3 as seed ortholog is 99%.

Group of orthologs #1176. Best score 160 bits
Score difference with first non-orthologous sequence - A.capsulata:160 P.pallidum:160

C0NXA4              	100.00%		D3B151              	100.00%
Bootstrap support for C0NXA4 as seed ortholog is 100%.
Bootstrap support for D3B151 as seed ortholog is 100%.

Group of orthologs #1177. Best score 160 bits
Score difference with first non-orthologous sequence - A.capsulata:160 P.pallidum:51

C0NDG0              	100.00%		D3BN92              	100.00%
Bootstrap support for C0NDG0 as seed ortholog is 100%.
Bootstrap support for D3BN92 as seed ortholog is 74%.
Alternative seed ortholog is D3BF50 (51 bits away from this cluster)

Group of orthologs #1178. Best score 160 bits
Score difference with first non-orthologous sequence - A.capsulata:160 P.pallidum:160

C0NJK8              	100.00%		D3BNV1              	100.00%
Bootstrap support for C0NJK8 as seed ortholog is 100%.
Bootstrap support for D3BNV1 as seed ortholog is 100%.

Group of orthologs #1179. Best score 160 bits
Score difference with first non-orthologous sequence - A.capsulata:160 P.pallidum:160

C0NR65              	100.00%		D3BLM4              	100.00%
Bootstrap support for C0NR65 as seed ortholog is 100%.
Bootstrap support for D3BLM4 as seed ortholog is 100%.

Group of orthologs #1180. Best score 160 bits
Score difference with first non-orthologous sequence - A.capsulata:160 P.pallidum:120

C0NRV7              	100.00%		D3BMX0              	100.00%
Bootstrap support for C0NRV7 as seed ortholog is 100%.
Bootstrap support for D3BMX0 as seed ortholog is 99%.

Group of orthologs #1181. Best score 160 bits
Score difference with first non-orthologous sequence - A.capsulata:160 P.pallidum:160

C0NND0              	100.00%		D3BUH6              	100.00%
Bootstrap support for C0NND0 as seed ortholog is 100%.
Bootstrap support for D3BUH6 as seed ortholog is 100%.

Group of orthologs #1182. Best score 160 bits
Score difference with first non-orthologous sequence - A.capsulata:160 P.pallidum:160

C0P0L1              	100.00%		D3BS88              	100.00%
Bootstrap support for C0P0L1 as seed ortholog is 100%.
Bootstrap support for D3BS88 as seed ortholog is 100%.

Group of orthologs #1183. Best score 159 bits
Score difference with first non-orthologous sequence - A.capsulata:159 P.pallidum:159

C0NCU6              	100.00%		D3BBG4              	100.00%
Bootstrap support for C0NCU6 as seed ortholog is 100%.
Bootstrap support for D3BBG4 as seed ortholog is 100%.

Group of orthologs #1184. Best score 159 bits
Score difference with first non-orthologous sequence - A.capsulata:159 P.pallidum:159

C0NC21              	100.00%		D3BK14              	100.00%
Bootstrap support for C0NC21 as seed ortholog is 100%.
Bootstrap support for D3BK14 as seed ortholog is 100%.

Group of orthologs #1185. Best score 159 bits
Score difference with first non-orthologous sequence - A.capsulata:159 P.pallidum:159

C0NG60              	100.00%		D3BUS8              	100.00%
Bootstrap support for C0NG60 as seed ortholog is 100%.
Bootstrap support for D3BUS8 as seed ortholog is 100%.

Group of orthologs #1186. Best score 159 bits
Score difference with first non-orthologous sequence - A.capsulata:159 P.pallidum:159

C0NUP2              	100.00%		D3BT31              	100.00%
Bootstrap support for C0NUP2 as seed ortholog is 100%.
Bootstrap support for D3BT31 as seed ortholog is 100%.

Group of orthologs #1187. Best score 158 bits
Score difference with first non-orthologous sequence - A.capsulata:95 P.pallidum:109

C0NAE4              	100.00%		D3AW79              	100.00%
Bootstrap support for C0NAE4 as seed ortholog is 98%.
Bootstrap support for D3AW79 as seed ortholog is 99%.

Group of orthologs #1188. Best score 158 bits
Score difference with first non-orthologous sequence - A.capsulata:158 P.pallidum:158

C0NM50              	100.00%		D3B267              	100.00%
Bootstrap support for C0NM50 as seed ortholog is 100%.
Bootstrap support for D3B267 as seed ortholog is 100%.

Group of orthologs #1189. Best score 158 bits
Score difference with first non-orthologous sequence - A.capsulata:158 P.pallidum:158

C0NKT8              	100.00%		D3B6Y3              	100.00%
Bootstrap support for C0NKT8 as seed ortholog is 100%.
Bootstrap support for D3B6Y3 as seed ortholog is 100%.

Group of orthologs #1190. Best score 158 bits
Score difference with first non-orthologous sequence - A.capsulata:158 P.pallidum:158

C0NS92              	100.00%		D3B3Z8              	100.00%
Bootstrap support for C0NS92 as seed ortholog is 100%.
Bootstrap support for D3B3Z8 as seed ortholog is 100%.

Group of orthologs #1191. Best score 158 bits
Score difference with first non-orthologous sequence - A.capsulata:158 P.pallidum:158

C0NL86              	100.00%		D3BAI7              	100.00%
Bootstrap support for C0NL86 as seed ortholog is 100%.
Bootstrap support for D3BAI7 as seed ortholog is 100%.

Group of orthologs #1192. Best score 158 bits
Score difference with first non-orthologous sequence - A.capsulata:158 P.pallidum:158

C0NUS1              	100.00%		D3BBD2              	100.00%
Bootstrap support for C0NUS1 as seed ortholog is 100%.
Bootstrap support for D3BBD2 as seed ortholog is 100%.

Group of orthologs #1193. Best score 158 bits
Score difference with first non-orthologous sequence - A.capsulata:158 P.pallidum:158

C0P180              	100.00%		D3B614              	100.00%
Bootstrap support for C0P180 as seed ortholog is 100%.
Bootstrap support for D3B614 as seed ortholog is 100%.

Group of orthologs #1194. Best score 157 bits
Score difference with first non-orthologous sequence - A.capsulata:49 P.pallidum:157

C0NRG7              	100.00%		D3B6J8              	100.00%
                    	       		D3BUI2              	42.23%
                    	       		D3AY58              	38.70%
                    	       		D3BA42              	13.01%
                    	       		D3B1E7              	7.06%
Bootstrap support for C0NRG7 as seed ortholog is 83%.
Bootstrap support for D3B6J8 as seed ortholog is 100%.

Group of orthologs #1195. Best score 157 bits
Score difference with first non-orthologous sequence - A.capsulata:31 P.pallidum:54

C0NH54              	100.00%		D3BAH5              	100.00%
Bootstrap support for C0NH54 as seed ortholog is 83%.
Bootstrap support for D3BAH5 as seed ortholog is 90%.

Group of orthologs #1196. Best score 156 bits
Score difference with first non-orthologous sequence - A.capsulata:156 P.pallidum:156

C0NH13              	100.00%		D3BGN2              	100.00%
C0NV51              	29.37%		
C0NT93              	26.00%		
Bootstrap support for C0NH13 as seed ortholog is 100%.
Bootstrap support for D3BGN2 as seed ortholog is 100%.

Group of orthologs #1197. Best score 156 bits
Score difference with first non-orthologous sequence - A.capsulata:156 P.pallidum:156

C0NFN5              	100.00%		D3B1Q8              	100.00%
Bootstrap support for C0NFN5 as seed ortholog is 100%.
Bootstrap support for D3B1Q8 as seed ortholog is 100%.

Group of orthologs #1198. Best score 156 bits
Score difference with first non-orthologous sequence - A.capsulata:156 P.pallidum:156

C0NSH0              	100.00%		D3AXW3              	100.00%
Bootstrap support for C0NSH0 as seed ortholog is 100%.
Bootstrap support for D3AXW3 as seed ortholog is 100%.

Group of orthologs #1199. Best score 156 bits
Score difference with first non-orthologous sequence - A.capsulata:156 P.pallidum:156

C0NCM9              	100.00%		D3BI13              	100.00%
Bootstrap support for C0NCM9 as seed ortholog is 100%.
Bootstrap support for D3BI13 as seed ortholog is 100%.

Group of orthologs #1200. Best score 156 bits
Score difference with first non-orthologous sequence - A.capsulata:86 P.pallidum:53

C0NHG3              	100.00%		D3BM67              	100.00%
Bootstrap support for C0NHG3 as seed ortholog is 99%.
Bootstrap support for D3BM67 as seed ortholog is 96%.

Group of orthologs #1201. Best score 156 bits
Score difference with first non-orthologous sequence - A.capsulata:156 P.pallidum:156

C0NW39              	100.00%		D3BDZ0              	100.00%
Bootstrap support for C0NW39 as seed ortholog is 100%.
Bootstrap support for D3BDZ0 as seed ortholog is 100%.

Group of orthologs #1202. Best score 156 bits
Score difference with first non-orthologous sequence - A.capsulata:156 P.pallidum:156

C0NT90              	100.00%		D3BIW4              	100.00%
Bootstrap support for C0NT90 as seed ortholog is 100%.
Bootstrap support for D3BIW4 as seed ortholog is 100%.

Group of orthologs #1203. Best score 155 bits
Score difference with first non-orthologous sequence - A.capsulata:155 P.pallidum:155

C0NHA3              	100.00%		D3B470              	100.00%
Bootstrap support for C0NHA3 as seed ortholog is 100%.
Bootstrap support for D3B470 as seed ortholog is 100%.

Group of orthologs #1204. Best score 155 bits
Score difference with first non-orthologous sequence - A.capsulata:155 P.pallidum:155

C0NHJ3              	100.00%		D3BAX8              	100.00%
Bootstrap support for C0NHJ3 as seed ortholog is 100%.
Bootstrap support for D3BAX8 as seed ortholog is 100%.

Group of orthologs #1205. Best score 155 bits
Score difference with first non-orthologous sequence - A.capsulata:155 P.pallidum:155

C0NM87              	100.00%		D3B7U1              	100.00%
Bootstrap support for C0NM87 as seed ortholog is 100%.
Bootstrap support for D3B7U1 as seed ortholog is 100%.

Group of orthologs #1206. Best score 155 bits
Score difference with first non-orthologous sequence - A.capsulata:155 P.pallidum:155

C0NIY5              	100.00%		D3BC43              	100.00%
Bootstrap support for C0NIY5 as seed ortholog is 100%.
Bootstrap support for D3BC43 as seed ortholog is 100%.

Group of orthologs #1207. Best score 155 bits
Score difference with first non-orthologous sequence - A.capsulata:155 P.pallidum:155

C0NIQ5              	100.00%		D3BD72              	100.00%
Bootstrap support for C0NIQ5 as seed ortholog is 100%.
Bootstrap support for D3BD72 as seed ortholog is 100%.

Group of orthologs #1208. Best score 155 bits
Score difference with first non-orthologous sequence - A.capsulata:155 P.pallidum:155

C0NEE6              	100.00%		D3BNN1              	100.00%
Bootstrap support for C0NEE6 as seed ortholog is 100%.
Bootstrap support for D3BNN1 as seed ortholog is 100%.

Group of orthologs #1209. Best score 155 bits
Score difference with first non-orthologous sequence - A.capsulata:155 P.pallidum:155

C0NFV9              	100.00%		D3BMU4              	100.00%
Bootstrap support for C0NFV9 as seed ortholog is 100%.
Bootstrap support for D3BMU4 as seed ortholog is 100%.

Group of orthologs #1210. Best score 155 bits
Score difference with first non-orthologous sequence - A.capsulata:155 P.pallidum:155

C0NBI3              	100.00%		D3BVG1              	100.00%
Bootstrap support for C0NBI3 as seed ortholog is 100%.
Bootstrap support for D3BVG1 as seed ortholog is 100%.

Group of orthologs #1211. Best score 155 bits
Score difference with first non-orthologous sequence - A.capsulata:155 P.pallidum:155

C0NVC6              	100.00%		D3BIR0              	100.00%
Bootstrap support for C0NVC6 as seed ortholog is 100%.
Bootstrap support for D3BIR0 as seed ortholog is 100%.

Group of orthologs #1212. Best score 155 bits
Score difference with first non-orthologous sequence - A.capsulata:155 P.pallidum:155

C0NYS7              	100.00%		D3BPU5              	100.00%
Bootstrap support for C0NYS7 as seed ortholog is 100%.
Bootstrap support for D3BPU5 as seed ortholog is 100%.

Group of orthologs #1213. Best score 154 bits
Score difference with first non-orthologous sequence - A.capsulata:154 P.pallidum:154

C0NBP0              	100.00%		D3AZT3              	100.00%
Bootstrap support for C0NBP0 as seed ortholog is 100%.
Bootstrap support for D3AZT3 as seed ortholog is 100%.

Group of orthologs #1214. Best score 154 bits
Score difference with first non-orthologous sequence - A.capsulata:154 P.pallidum:154

C0NSX6              	100.00%		D3AVM9              	100.00%
Bootstrap support for C0NSX6 as seed ortholog is 100%.
Bootstrap support for D3AVM9 as seed ortholog is 100%.

Group of orthologs #1215. Best score 154 bits
Score difference with first non-orthologous sequence - A.capsulata:87 P.pallidum:154

C0NMR3              	100.00%		D3B439              	100.00%
Bootstrap support for C0NMR3 as seed ortholog is 99%.
Bootstrap support for D3B439 as seed ortholog is 100%.

Group of orthologs #1216. Best score 154 bits
Score difference with first non-orthologous sequence - A.capsulata:70 P.pallidum:154

C0NMT7              	100.00%		D3B7L3              	100.00%
Bootstrap support for C0NMT7 as seed ortholog is 98%.
Bootstrap support for D3B7L3 as seed ortholog is 100%.

Group of orthologs #1217. Best score 154 bits
Score difference with first non-orthologous sequence - A.capsulata:154 P.pallidum:154

C0NYE9              	100.00%		D3B4X6              	100.00%
Bootstrap support for C0NYE9 as seed ortholog is 100%.
Bootstrap support for D3B4X6 as seed ortholog is 100%.

Group of orthologs #1218. Best score 154 bits
Score difference with first non-orthologous sequence - A.capsulata:102 P.pallidum:154

C0NI19              	100.00%		D3BTY7              	100.00%
Bootstrap support for C0NI19 as seed ortholog is 99%.
Bootstrap support for D3BTY7 as seed ortholog is 100%.

Group of orthologs #1219. Best score 154 bits
Score difference with first non-orthologous sequence - A.capsulata:100 P.pallidum:77

C0NWP3              	100.00%		D3BJW0              	100.00%
Bootstrap support for C0NWP3 as seed ortholog is 99%.
Bootstrap support for D3BJW0 as seed ortholog is 97%.

Group of orthologs #1220. Best score 153 bits
Score difference with first non-orthologous sequence - A.capsulata:153 P.pallidum:153

C0NXK4              	100.00%		D3AYG6              	100.00%
Bootstrap support for C0NXK4 as seed ortholog is 100%.
Bootstrap support for D3AYG6 as seed ortholog is 100%.

Group of orthologs #1221. Best score 153 bits
Score difference with first non-orthologous sequence - A.capsulata:153 P.pallidum:153

C0NRL2              	100.00%		D3BCQ2              	100.00%
Bootstrap support for C0NRL2 as seed ortholog is 100%.
Bootstrap support for D3BCQ2 as seed ortholog is 100%.

Group of orthologs #1222. Best score 153 bits
Score difference with first non-orthologous sequence - A.capsulata:153 P.pallidum:95

C0NWD5              	100.00%		D3BQ64              	100.00%
Bootstrap support for C0NWD5 as seed ortholog is 100%.
Bootstrap support for D3BQ64 as seed ortholog is 97%.

Group of orthologs #1223. Best score 153 bits
Score difference with first non-orthologous sequence - A.capsulata:153 P.pallidum:153

C0P151              	100.00%		D3BSN4              	100.00%
Bootstrap support for C0P151 as seed ortholog is 100%.
Bootstrap support for D3BSN4 as seed ortholog is 100%.

Group of orthologs #1224. Best score 152 bits
Score difference with first non-orthologous sequence - A.capsulata:152 P.pallidum:152

C0NCG8              	100.00%		D3AY46              	100.00%
                    	       		D3BPS2              	7.19%
Bootstrap support for C0NCG8 as seed ortholog is 100%.
Bootstrap support for D3AY46 as seed ortholog is 100%.

Group of orthologs #1225. Best score 152 bits
Score difference with first non-orthologous sequence - A.capsulata:152 P.pallidum:152

C0NC45              	100.00%		D3B9D0              	100.00%
Bootstrap support for C0NC45 as seed ortholog is 100%.
Bootstrap support for D3B9D0 as seed ortholog is 100%.

Group of orthologs #1226. Best score 152 bits
Score difference with first non-orthologous sequence - A.capsulata:152 P.pallidum:152

C0NQ83              	100.00%		D3AY17              	100.00%
Bootstrap support for C0NQ83 as seed ortholog is 100%.
Bootstrap support for D3AY17 as seed ortholog is 100%.

Group of orthologs #1227. Best score 152 bits
Score difference with first non-orthologous sequence - A.capsulata:152 P.pallidum:95

C0NMK8              	100.00%		D3B7E1              	100.00%
Bootstrap support for C0NMK8 as seed ortholog is 100%.
Bootstrap support for D3B7E1 as seed ortholog is 99%.

Group of orthologs #1228. Best score 152 bits
Score difference with first non-orthologous sequence - A.capsulata:98 P.pallidum:152

C0NU24              	100.00%		D3B6S5              	100.00%
Bootstrap support for C0NU24 as seed ortholog is 99%.
Bootstrap support for D3B6S5 as seed ortholog is 100%.

Group of orthologs #1229. Best score 151 bits
Score difference with first non-orthologous sequence - A.capsulata:151 P.pallidum:151

C0ND92              	100.00%		D3AWN6              	100.00%
C0NL59              	100.00%		D3BIG9              	17.74%
Bootstrap support for C0ND92 as seed ortholog is 100%.
Bootstrap support for C0NL59 as seed ortholog is 100%.
Bootstrap support for D3AWN6 as seed ortholog is 100%.

Group of orthologs #1230. Best score 151 bits
Score difference with first non-orthologous sequence - A.capsulata:151 P.pallidum:151

C0NHM7              	100.00%		D3BAK2              	100.00%
Bootstrap support for C0NHM7 as seed ortholog is 100%.
Bootstrap support for D3BAK2 as seed ortholog is 100%.

Group of orthologs #1231. Best score 151 bits
Score difference with first non-orthologous sequence - A.capsulata:151 P.pallidum:151

C0NKC3              	100.00%		D3BH46              	100.00%
Bootstrap support for C0NKC3 as seed ortholog is 100%.
Bootstrap support for D3BH46 as seed ortholog is 100%.

Group of orthologs #1232. Best score 151 bits
Score difference with first non-orthologous sequence - A.capsulata:25 P.pallidum:151

C0NA92              	100.00%		D3BTD4              	100.00%
Bootstrap support for C0NA92 as seed ortholog is 69%.
Alternative seed ortholog is C0NWV2 (25 bits away from this cluster)
Bootstrap support for D3BTD4 as seed ortholog is 100%.

Group of orthologs #1233. Best score 151 bits
Score difference with first non-orthologous sequence - A.capsulata:73 P.pallidum:151

C0NC13              	100.00%		D3BS21              	100.00%
Bootstrap support for C0NC13 as seed ortholog is 95%.
Bootstrap support for D3BS21 as seed ortholog is 100%.

Group of orthologs #1234. Best score 151 bits
Score difference with first non-orthologous sequence - A.capsulata:109 P.pallidum:151

C0P0S5              	100.00%		D3B842              	100.00%
Bootstrap support for C0P0S5 as seed ortholog is 99%.
Bootstrap support for D3B842 as seed ortholog is 100%.

Group of orthologs #1235. Best score 151 bits
Score difference with first non-orthologous sequence - A.capsulata:151 P.pallidum:151

C0NVQ7              	100.00%		D3BU14              	100.00%
Bootstrap support for C0NVQ7 as seed ortholog is 100%.
Bootstrap support for D3BU14 as seed ortholog is 100%.

Group of orthologs #1236. Best score 150 bits
Score difference with first non-orthologous sequence - A.capsulata:11 P.pallidum:1

C0NUA0              	100.00%		D3B428              	100.00%
                    	       		D3AY23              	12.22%
Bootstrap support for C0NUA0 as seed ortholog is 59%.
Alternative seed ortholog is C0NIB4 (11 bits away from this cluster)
Bootstrap support for D3B428 as seed ortholog is 56%.
Alternative seed ortholog is D3BAM1 (1 bits away from this cluster)

Group of orthologs #1237. Best score 150 bits
Score difference with first non-orthologous sequence - A.capsulata:150 P.pallidum:150

C0NP78              	100.00%		D3BAW8              	100.00%
Bootstrap support for C0NP78 as seed ortholog is 100%.
Bootstrap support for D3BAW8 as seed ortholog is 100%.

Group of orthologs #1238. Best score 150 bits
Score difference with first non-orthologous sequence - A.capsulata:150 P.pallidum:150

C0NX45              	100.00%		D3B9B9              	100.00%
Bootstrap support for C0NX45 as seed ortholog is 100%.
Bootstrap support for D3B9B9 as seed ortholog is 100%.

Group of orthologs #1239. Best score 150 bits
Score difference with first non-orthologous sequence - A.capsulata:53 P.pallidum:150

C0NZI1              	100.00%		D3BCW0              	100.00%
Bootstrap support for C0NZI1 as seed ortholog is 99%.
Bootstrap support for D3BCW0 as seed ortholog is 100%.

Group of orthologs #1240. Best score 150 bits
Score difference with first non-orthologous sequence - A.capsulata:150 P.pallidum:150

C0NL11              	100.00%		D3BV71              	100.00%
Bootstrap support for C0NL11 as seed ortholog is 100%.
Bootstrap support for D3BV71 as seed ortholog is 100%.

Group of orthologs #1241. Best score 149 bits
Score difference with first non-orthologous sequence - A.capsulata:28 P.pallidum:65

C0NMU9              	100.00%		D3B457              	100.00%
C0NFJ2              	100.00%		D3BNQ4              	100.00%
Bootstrap support for C0NMU9 as seed ortholog is 75%.
Bootstrap support for C0NFJ2 as seed ortholog is 72%.
Alternative seed ortholog is C0NAQ7 (28 bits away from this cluster)
Bootstrap support for D3B457 as seed ortholog is 93%.
Bootstrap support for D3BNQ4 as seed ortholog is 92%.

Group of orthologs #1242. Best score 149 bits
Score difference with first non-orthologous sequence - A.capsulata:149 P.pallidum:149

C0NCC9              	100.00%		D3B4M4              	100.00%
Bootstrap support for C0NCC9 as seed ortholog is 100%.
Bootstrap support for D3B4M4 as seed ortholog is 100%.

Group of orthologs #1243. Best score 149 bits
Score difference with first non-orthologous sequence - A.capsulata:149 P.pallidum:149

C0NIE4              	100.00%		D3BC65              	100.00%
Bootstrap support for C0NIE4 as seed ortholog is 100%.
Bootstrap support for D3BC65 as seed ortholog is 100%.

Group of orthologs #1244. Best score 149 bits
Score difference with first non-orthologous sequence - A.capsulata:149 P.pallidum:149

C0NVX1              	100.00%		D3B056              	100.00%
Bootstrap support for C0NVX1 as seed ortholog is 100%.
Bootstrap support for D3B056 as seed ortholog is 100%.

Group of orthologs #1245. Best score 149 bits
Score difference with first non-orthologous sequence - A.capsulata:149 P.pallidum:149

C0NS79              	100.00%		D3BK97              	100.00%
Bootstrap support for C0NS79 as seed ortholog is 100%.
Bootstrap support for D3BK97 as seed ortholog is 100%.

Group of orthologs #1246. Best score 149 bits
Score difference with first non-orthologous sequence - A.capsulata:52 P.pallidum:149

C0NZL5              	100.00%		D3BRK5              	100.00%
Bootstrap support for C0NZL5 as seed ortholog is 93%.
Bootstrap support for D3BRK5 as seed ortholog is 100%.

Group of orthologs #1247. Best score 148 bits
Score difference with first non-orthologous sequence - A.capsulata:72 P.pallidum:148

C0NX50              	100.00%		D3BB43              	100.00%
C0NML5              	25.27%		D3BB55              	71.55%
                    	       		D3BJD4              	41.31%
                    	       		D3BJH4              	18.23%
                    	       		D3BCX6              	8.85%
Bootstrap support for C0NX50 as seed ortholog is 89%.
Bootstrap support for D3BB43 as seed ortholog is 100%.

Group of orthologs #1248. Best score 148 bits
Score difference with first non-orthologous sequence - A.capsulata:148 P.pallidum:34

C0NKI4              	100.00%		D3B5A6              	100.00%
Bootstrap support for C0NKI4 as seed ortholog is 100%.
Bootstrap support for D3B5A6 as seed ortholog is 91%.

Group of orthologs #1249. Best score 148 bits
Score difference with first non-orthologous sequence - A.capsulata:148 P.pallidum:148

C0NYP9              	100.00%		D3AW01              	100.00%
Bootstrap support for C0NYP9 as seed ortholog is 100%.
Bootstrap support for D3AW01 as seed ortholog is 100%.

Group of orthologs #1250. Best score 148 bits
Score difference with first non-orthologous sequence - A.capsulata:148 P.pallidum:148

C0NJM6              	100.00%		D3BII7              	100.00%
Bootstrap support for C0NJM6 as seed ortholog is 100%.
Bootstrap support for D3BII7 as seed ortholog is 100%.

Group of orthologs #1251. Best score 148 bits
Score difference with first non-orthologous sequence - A.capsulata:148 P.pallidum:148

C0P133              	100.00%		D3B2Q1              	100.00%
Bootstrap support for C0P133 as seed ortholog is 100%.
Bootstrap support for D3B2Q1 as seed ortholog is 100%.

Group of orthologs #1252. Best score 148 bits
Score difference with first non-orthologous sequence - A.capsulata:148 P.pallidum:148

C0NWI0              	100.00%		D3B7M3              	100.00%
Bootstrap support for C0NWI0 as seed ortholog is 100%.
Bootstrap support for D3B7M3 as seed ortholog is 100%.

Group of orthologs #1253. Best score 148 bits
Score difference with first non-orthologous sequence - A.capsulata:59 P.pallidum:18

C0NWA1              	100.00%		D3BEF7              	100.00%
Bootstrap support for C0NWA1 as seed ortholog is 93%.
Bootstrap support for D3BEF7 as seed ortholog is 81%.

Group of orthologs #1254. Best score 148 bits
Score difference with first non-orthologous sequence - A.capsulata:148 P.pallidum:148

C0NMN5              	100.00%		D3BSM2              	100.00%
Bootstrap support for C0NMN5 as seed ortholog is 100%.
Bootstrap support for D3BSM2 as seed ortholog is 100%.

Group of orthologs #1255. Best score 148 bits
Score difference with first non-orthologous sequence - A.capsulata:148 P.pallidum:148

C0NVN6              	100.00%		D3BKL0              	100.00%
Bootstrap support for C0NVN6 as seed ortholog is 100%.
Bootstrap support for D3BKL0 as seed ortholog is 100%.

Group of orthologs #1256. Best score 148 bits
Score difference with first non-orthologous sequence - A.capsulata:148 P.pallidum:41

C0NQ19              	100.00%		D3BU73              	100.00%
Bootstrap support for C0NQ19 as seed ortholog is 100%.
Bootstrap support for D3BU73 as seed ortholog is 97%.

Group of orthologs #1257. Best score 147 bits
Score difference with first non-orthologous sequence - A.capsulata:147 P.pallidum:147

C0NQ66              	100.00%		D3AY07              	100.00%
Bootstrap support for C0NQ66 as seed ortholog is 100%.
Bootstrap support for D3AY07 as seed ortholog is 100%.

Group of orthologs #1258. Best score 147 bits
Score difference with first non-orthologous sequence - A.capsulata:147 P.pallidum:147

C0NXF9              	100.00%		D3AYN0              	100.00%
Bootstrap support for C0NXF9 as seed ortholog is 100%.
Bootstrap support for D3AYN0 as seed ortholog is 100%.

Group of orthologs #1259. Best score 146 bits
Score difference with first non-orthologous sequence - A.capsulata:93 P.pallidum:58

C0NFE1              	100.00%		D3BQ72              	100.00%
                    	       		D3B9K5              	30.45%
Bootstrap support for C0NFE1 as seed ortholog is 99%.
Bootstrap support for D3BQ72 as seed ortholog is 97%.

Group of orthologs #1260. Best score 146 bits
Score difference with first non-orthologous sequence - A.capsulata:146 P.pallidum:146

C0NE66              	100.00%		D3B9C0              	100.00%
Bootstrap support for C0NE66 as seed ortholog is 100%.
Bootstrap support for D3B9C0 as seed ortholog is 100%.

Group of orthologs #1261. Best score 146 bits
Score difference with first non-orthologous sequence - A.capsulata:146 P.pallidum:146

C0NTZ9              	100.00%		D3AYM7              	100.00%
Bootstrap support for C0NTZ9 as seed ortholog is 100%.
Bootstrap support for D3AYM7 as seed ortholog is 100%.

Group of orthologs #1262. Best score 146 bits
Score difference with first non-orthologous sequence - A.capsulata:146 P.pallidum:146

C0NWA6              	100.00%		D3BIL1              	100.00%
Bootstrap support for C0NWA6 as seed ortholog is 100%.
Bootstrap support for D3BIL1 as seed ortholog is 100%.

Group of orthologs #1263. Best score 145 bits
Score difference with first non-orthologous sequence - A.capsulata:41 P.pallidum:29

C0NJP0              	100.00%		D3BRT8              	100.00%
C0NFN0              	9.81%		
Bootstrap support for C0NJP0 as seed ortholog is 97%.
Bootstrap support for D3BRT8 as seed ortholog is 82%.

Group of orthologs #1264. Best score 145 bits
Score difference with first non-orthologous sequence - A.capsulata:145 P.pallidum:145

C0NGD7              	100.00%		D3B954              	100.00%
Bootstrap support for C0NGD7 as seed ortholog is 100%.
Bootstrap support for D3B954 as seed ortholog is 100%.

Group of orthologs #1265. Best score 145 bits
Score difference with first non-orthologous sequence - A.capsulata:145 P.pallidum:145

C0NHK9              	100.00%		D3BG35              	100.00%
Bootstrap support for C0NHK9 as seed ortholog is 100%.
Bootstrap support for D3BG35 as seed ortholog is 100%.

Group of orthologs #1266. Best score 145 bits
Score difference with first non-orthologous sequence - A.capsulata:145 P.pallidum:145

C0NEB1              	100.00%		D3BQ00              	100.00%
Bootstrap support for C0NEB1 as seed ortholog is 100%.
Bootstrap support for D3BQ00 as seed ortholog is 100%.

Group of orthologs #1267. Best score 145 bits
Score difference with first non-orthologous sequence - A.capsulata:145 P.pallidum:145

C0NT49              	100.00%		D3BCE5              	100.00%
Bootstrap support for C0NT49 as seed ortholog is 100%.
Bootstrap support for D3BCE5 as seed ortholog is 100%.

Group of orthologs #1268. Best score 144 bits
Score difference with first non-orthologous sequence - A.capsulata:144 P.pallidum:144

C0NA86              	100.00%		D3B7P6              	100.00%
Bootstrap support for C0NA86 as seed ortholog is 100%.
Bootstrap support for D3B7P6 as seed ortholog is 100%.

Group of orthologs #1269. Best score 144 bits
Score difference with first non-orthologous sequence - A.capsulata:31 P.pallidum:144

C0NAH6              	100.00%		D3B7Q8              	100.00%
Bootstrap support for C0NAH6 as seed ortholog is 77%.
Bootstrap support for D3B7Q8 as seed ortholog is 100%.

Group of orthologs #1270. Best score 144 bits
Score difference with first non-orthologous sequence - A.capsulata:144 P.pallidum:144

C0NG23              	100.00%		D3BC68              	100.00%
Bootstrap support for C0NG23 as seed ortholog is 100%.
Bootstrap support for D3BC68 as seed ortholog is 100%.

Group of orthologs #1271. Best score 144 bits
Score difference with first non-orthologous sequence - A.capsulata:144 P.pallidum:68

C0NAA3              	100.00%		D3BJB1              	100.00%
Bootstrap support for C0NAA3 as seed ortholog is 100%.
Bootstrap support for D3BJB1 as seed ortholog is 99%.

Group of orthologs #1272. Best score 144 bits
Score difference with first non-orthologous sequence - A.capsulata:144 P.pallidum:144

C0NAW6              	100.00%		D3BLD3              	100.00%
Bootstrap support for C0NAW6 as seed ortholog is 100%.
Bootstrap support for D3BLD3 as seed ortholog is 100%.

Group of orthologs #1273. Best score 144 bits
Score difference with first non-orthologous sequence - A.capsulata:144 P.pallidum:144

C0NZM2              	100.00%		D3AYW2              	100.00%
Bootstrap support for C0NZM2 as seed ortholog is 100%.
Bootstrap support for D3AYW2 as seed ortholog is 100%.

Group of orthologs #1274. Best score 144 bits
Score difference with first non-orthologous sequence - A.capsulata:144 P.pallidum:144

C0NDZ6              	100.00%		D3BL42              	100.00%
Bootstrap support for C0NDZ6 as seed ortholog is 100%.
Bootstrap support for D3BL42 as seed ortholog is 100%.

Group of orthologs #1275. Best score 144 bits
Score difference with first non-orthologous sequence - A.capsulata:83 P.pallidum:90

C0NG44              	100.00%		D3BK08              	100.00%
Bootstrap support for C0NG44 as seed ortholog is 99%.
Bootstrap support for D3BK08 as seed ortholog is 99%.

Group of orthologs #1276. Best score 144 bits
Score difference with first non-orthologous sequence - A.capsulata:144 P.pallidum:80

C0NRQ3              	100.00%		D3BGB8              	100.00%
Bootstrap support for C0NRQ3 as seed ortholog is 100%.
Bootstrap support for D3BGB8 as seed ortholog is 99%.

Group of orthologs #1277. Best score 144 bits
Score difference with first non-orthologous sequence - A.capsulata:69 P.pallidum:31

C0P0S3              	100.00%		D3B8B0              	100.00%
Bootstrap support for C0P0S3 as seed ortholog is 94%.
Bootstrap support for D3B8B0 as seed ortholog is 75%.

Group of orthologs #1278. Best score 144 bits
Score difference with first non-orthologous sequence - A.capsulata:144 P.pallidum:144

C0NLV9              	100.00%		D3BVM6              	100.00%
Bootstrap support for C0NLV9 as seed ortholog is 100%.
Bootstrap support for D3BVM6 as seed ortholog is 100%.

Group of orthologs #1279. Best score 143 bits
Score difference with first non-orthologous sequence - A.capsulata:143 P.pallidum:85

C0NPZ7              	100.00%		D3BSQ5              	100.00%
                    	       		D3BJP6              	13.02%
Bootstrap support for C0NPZ7 as seed ortholog is 100%.
Bootstrap support for D3BSQ5 as seed ortholog is 99%.

Group of orthologs #1280. Best score 143 bits
Score difference with first non-orthologous sequence - A.capsulata:143 P.pallidum:143

C0NMJ3              	100.00%		D3AY63              	100.00%
Bootstrap support for C0NMJ3 as seed ortholog is 100%.
Bootstrap support for D3AY63 as seed ortholog is 100%.

Group of orthologs #1281. Best score 143 bits
Score difference with first non-orthologous sequence - A.capsulata:143 P.pallidum:143

C0NQT7              	100.00%		D3B660              	100.00%
Bootstrap support for C0NQT7 as seed ortholog is 100%.
Bootstrap support for D3B660 as seed ortholog is 100%.

Group of orthologs #1282. Best score 143 bits
Score difference with first non-orthologous sequence - A.capsulata:143 P.pallidum:143

C0NH46              	100.00%		D3BL35              	100.00%
Bootstrap support for C0NH46 as seed ortholog is 100%.
Bootstrap support for D3BL35 as seed ortholog is 100%.

Group of orthologs #1283. Best score 143 bits
Score difference with first non-orthologous sequence - A.capsulata:35 P.pallidum:143

C0NFR6              	100.00%		D3BQD0              	100.00%
Bootstrap support for C0NFR6 as seed ortholog is 94%.
Bootstrap support for D3BQD0 as seed ortholog is 100%.

Group of orthologs #1284. Best score 143 bits
Score difference with first non-orthologous sequence - A.capsulata:143 P.pallidum:143

C0NL28              	100.00%		D3BQV7              	100.00%
Bootstrap support for C0NL28 as seed ortholog is 100%.
Bootstrap support for D3BQV7 as seed ortholog is 100%.

Group of orthologs #1285. Best score 143 bits
Score difference with first non-orthologous sequence - A.capsulata:143 P.pallidum:143

C0NXJ0              	100.00%		D3BKJ2              	100.00%
Bootstrap support for C0NXJ0 as seed ortholog is 100%.
Bootstrap support for D3BKJ2 as seed ortholog is 100%.

Group of orthologs #1286. Best score 143 bits
Score difference with first non-orthologous sequence - A.capsulata:143 P.pallidum:143

C0NWS9              	100.00%		D3BST7              	100.00%
Bootstrap support for C0NWS9 as seed ortholog is 100%.
Bootstrap support for D3BST7 as seed ortholog is 100%.

Group of orthologs #1287. Best score 142 bits
Score difference with first non-orthologous sequence - A.capsulata:142 P.pallidum:142

C0NBM9              	100.00%		D3BRH9              	100.00%
Bootstrap support for C0NBM9 as seed ortholog is 100%.
Bootstrap support for D3BRH9 as seed ortholog is 100%.

Group of orthologs #1288. Best score 141 bits
Score difference with first non-orthologous sequence - A.capsulata:141 P.pallidum:141

C0NMG7              	100.00%		D3BMP8              	100.00%
                    	       		D3B338              	25.90%
Bootstrap support for C0NMG7 as seed ortholog is 100%.
Bootstrap support for D3BMP8 as seed ortholog is 100%.

Group of orthologs #1289. Best score 141 bits
Score difference with first non-orthologous sequence - A.capsulata:141 P.pallidum:79

C0P015              	100.00%		D3AYE3              	100.00%
Bootstrap support for C0P015 as seed ortholog is 100%.
Bootstrap support for D3AYE3 as seed ortholog is 98%.

Group of orthologs #1290. Best score 141 bits
Score difference with first non-orthologous sequence - A.capsulata:141 P.pallidum:6

C0NSS2              	100.00%		D3B8Y2              	100.00%
Bootstrap support for C0NSS2 as seed ortholog is 100%.
Bootstrap support for D3B8Y2 as seed ortholog is 57%.
Alternative seed ortholog is D3BBM2 (6 bits away from this cluster)

Group of orthologs #1291. Best score 141 bits
Score difference with first non-orthologous sequence - A.capsulata:141 P.pallidum:141

C0NBL2              	100.00%		D3BTV9              	100.00%
Bootstrap support for C0NBL2 as seed ortholog is 100%.
Bootstrap support for D3BTV9 as seed ortholog is 100%.

Group of orthologs #1292. Best score 141 bits
Score difference with first non-orthologous sequence - A.capsulata:141 P.pallidum:141

C0NMT2              	100.00%		D3BKE7              	100.00%
Bootstrap support for C0NMT2 as seed ortholog is 100%.
Bootstrap support for D3BKE7 as seed ortholog is 100%.

Group of orthologs #1293. Best score 141 bits
Score difference with first non-orthologous sequence - A.capsulata:141 P.pallidum:141

C0NLR4              	100.00%		D3BTW0              	100.00%
Bootstrap support for C0NLR4 as seed ortholog is 100%.
Bootstrap support for D3BTW0 as seed ortholog is 100%.

Group of orthologs #1294. Best score 141 bits
Score difference with first non-orthologous sequence - A.capsulata:141 P.pallidum:141

C0NZU2              	100.00%		D3BH90              	100.00%
Bootstrap support for C0NZU2 as seed ortholog is 100%.
Bootstrap support for D3BH90 as seed ortholog is 100%.

Group of orthologs #1295. Best score 141 bits
Score difference with first non-orthologous sequence - A.capsulata:141 P.pallidum:141

C0NYX7              	100.00%		D3BM60              	100.00%
Bootstrap support for C0NYX7 as seed ortholog is 100%.
Bootstrap support for D3BM60 as seed ortholog is 100%.

Group of orthologs #1296. Best score 141 bits
Score difference with first non-orthologous sequence - A.capsulata:141 P.pallidum:141

C0NZB9              	100.00%		D3BQQ6              	100.00%
Bootstrap support for C0NZB9 as seed ortholog is 100%.
Bootstrap support for D3BQQ6 as seed ortholog is 100%.

Group of orthologs #1297. Best score 140 bits
Score difference with first non-orthologous sequence - A.capsulata:140 P.pallidum:140

C0NUQ8              	100.00%		D3BMA5              	100.00%
C0NB69              	16.11%		
Bootstrap support for C0NUQ8 as seed ortholog is 100%.
Bootstrap support for D3BMA5 as seed ortholog is 100%.

Group of orthologs #1298. Best score 140 bits
Score difference with first non-orthologous sequence - A.capsulata:140 P.pallidum:140

C0NJU0              	100.00%		D3AWR4              	100.00%
Bootstrap support for C0NJU0 as seed ortholog is 100%.
Bootstrap support for D3AWR4 as seed ortholog is 100%.

Group of orthologs #1299. Best score 140 bits
Score difference with first non-orthologous sequence - A.capsulata:140 P.pallidum:140

C0NSR7              	100.00%		D3B5H1              	100.00%
Bootstrap support for C0NSR7 as seed ortholog is 100%.
Bootstrap support for D3B5H1 as seed ortholog is 100%.

Group of orthologs #1300. Best score 140 bits
Score difference with first non-orthologous sequence - A.capsulata:140 P.pallidum:140

C0P1B5              	100.00%		D3B3S4              	100.00%
Bootstrap support for C0P1B5 as seed ortholog is 100%.
Bootstrap support for D3B3S4 as seed ortholog is 100%.

Group of orthologs #1301. Best score 139 bits
Score difference with first non-orthologous sequence - A.capsulata:139 P.pallidum:139

C0NZW8              	100.00%		D3BTR9              	100.00%
                    	       		D3BF54              	35.92%
                    	       		D3BEV2              	34.97%
                    	       		D3BNA9              	34.18%
                    	       		D3BEV3              	24.21%
                    	       		D3BEV1              	17.88%
Bootstrap support for C0NZW8 as seed ortholog is 100%.
Bootstrap support for D3BTR9 as seed ortholog is 100%.

Group of orthologs #1302. Best score 139 bits
Score difference with first non-orthologous sequence - A.capsulata:139 P.pallidum:139

C0NNR7              	100.00%		D3B511              	100.00%
C0NDZ0              	23.66%		
Bootstrap support for C0NNR7 as seed ortholog is 100%.
Bootstrap support for D3B511 as seed ortholog is 100%.

Group of orthologs #1303. Best score 139 bits
Score difference with first non-orthologous sequence - A.capsulata:139 P.pallidum:139

C0NID5              	100.00%		D3AXK2              	100.00%
Bootstrap support for C0NID5 as seed ortholog is 100%.
Bootstrap support for D3AXK2 as seed ortholog is 100%.

Group of orthologs #1304. Best score 139 bits
Score difference with first non-orthologous sequence - A.capsulata:139 P.pallidum:139

C0NK00              	100.00%		D3B081              	100.00%
Bootstrap support for C0NK00 as seed ortholog is 100%.
Bootstrap support for D3B081 as seed ortholog is 100%.

Group of orthologs #1305. Best score 139 bits
Score difference with first non-orthologous sequence - A.capsulata:139 P.pallidum:139

C0NMZ3              	100.00%		D3B1N7              	100.00%
Bootstrap support for C0NMZ3 as seed ortholog is 100%.
Bootstrap support for D3B1N7 as seed ortholog is 100%.

Group of orthologs #1306. Best score 139 bits
Score difference with first non-orthologous sequence - A.capsulata:139 P.pallidum:139

C0NTR7              	100.00%		D3AY36              	100.00%
Bootstrap support for C0NTR7 as seed ortholog is 100%.
Bootstrap support for D3AY36 as seed ortholog is 100%.

Group of orthologs #1307. Best score 139 bits
Score difference with first non-orthologous sequence - A.capsulata:139 P.pallidum:139

C0NSH7              	100.00%		D3B0E6              	100.00%
Bootstrap support for C0NSH7 as seed ortholog is 100%.
Bootstrap support for D3B0E6 as seed ortholog is 100%.

Group of orthologs #1308. Best score 139 bits
Score difference with first non-orthologous sequence - A.capsulata:139 P.pallidum:139

C0NFP4              	100.00%		D3BDV2              	100.00%
Bootstrap support for C0NFP4 as seed ortholog is 100%.
Bootstrap support for D3BDV2 as seed ortholog is 100%.

Group of orthologs #1309. Best score 139 bits
Score difference with first non-orthologous sequence - A.capsulata:139 P.pallidum:139

C0NIY1              	100.00%		D3BB09              	100.00%
Bootstrap support for C0NIY1 as seed ortholog is 100%.
Bootstrap support for D3BB09 as seed ortholog is 100%.

Group of orthologs #1310. Best score 139 bits
Score difference with first non-orthologous sequence - A.capsulata:139 P.pallidum:139

C0NJ36              	100.00%		D3BK47              	100.00%
Bootstrap support for C0NJ36 as seed ortholog is 100%.
Bootstrap support for D3BK47 as seed ortholog is 100%.

Group of orthologs #1311. Best score 139 bits
Score difference with first non-orthologous sequence - A.capsulata:139 P.pallidum:139

C0NC54              	100.00%		D3BSK0              	100.00%
Bootstrap support for C0NC54 as seed ortholog is 100%.
Bootstrap support for D3BSK0 as seed ortholog is 100%.

Group of orthologs #1312. Best score 138 bits
Score difference with first non-orthologous sequence - A.capsulata:138 P.pallidum:138

C0NKG6              	100.00%		D3BUI9              	100.00%
                    	       		D3BCF4              	19.04%
Bootstrap support for C0NKG6 as seed ortholog is 100%.
Bootstrap support for D3BUI9 as seed ortholog is 100%.

Group of orthologs #1313. Best score 138 bits
Score difference with first non-orthologous sequence - A.capsulata:138 P.pallidum:138

C0NCE2              	100.00%		D3B4Y2              	100.00%
Bootstrap support for C0NCE2 as seed ortholog is 100%.
Bootstrap support for D3B4Y2 as seed ortholog is 100%.

Group of orthologs #1314. Best score 138 bits
Score difference with first non-orthologous sequence - A.capsulata:138 P.pallidum:5

C0NKR4              	100.00%		D3B2G3              	100.00%
Bootstrap support for C0NKR4 as seed ortholog is 100%.
Bootstrap support for D3B2G3 as seed ortholog is 71%.
Alternative seed ortholog is D3BLM3 (5 bits away from this cluster)

Group of orthologs #1315. Best score 138 bits
Score difference with first non-orthologous sequence - A.capsulata:138 P.pallidum:138

C0NDT0              	100.00%		D3BAV6              	100.00%
Bootstrap support for C0NDT0 as seed ortholog is 100%.
Bootstrap support for D3BAV6 as seed ortholog is 100%.

Group of orthologs #1316. Best score 138 bits
Score difference with first non-orthologous sequence - A.capsulata:138 P.pallidum:11

C0NUF5              	100.00%		D3B1Z1              	100.00%
Bootstrap support for C0NUF5 as seed ortholog is 100%.
Bootstrap support for D3B1Z1 as seed ortholog is 39%.
Alternative seed ortholog is D3B9G4 (11 bits away from this cluster)

Group of orthologs #1317. Best score 138 bits
Score difference with first non-orthologous sequence - A.capsulata:138 P.pallidum:138

C0NEA3              	100.00%		D3BIC8              	100.00%
Bootstrap support for C0NEA3 as seed ortholog is 100%.
Bootstrap support for D3BIC8 as seed ortholog is 100%.

Group of orthologs #1318. Best score 138 bits
Score difference with first non-orthologous sequence - A.capsulata:76 P.pallidum:138

C0NDB1              	100.00%		D3BT12              	100.00%
Bootstrap support for C0NDB1 as seed ortholog is 98%.
Bootstrap support for D3BT12 as seed ortholog is 100%.

Group of orthologs #1319. Best score 138 bits
Score difference with first non-orthologous sequence - A.capsulata:138 P.pallidum:138

C0NDY4              	100.00%		D3BTP4              	100.00%
Bootstrap support for C0NDY4 as seed ortholog is 100%.
Bootstrap support for D3BTP4 as seed ortholog is 100%.

Group of orthologs #1320. Best score 138 bits
Score difference with first non-orthologous sequence - A.capsulata:138 P.pallidum:138

C0NWL6              	100.00%		D3BLD0              	100.00%
Bootstrap support for C0NWL6 as seed ortholog is 100%.
Bootstrap support for D3BLD0 as seed ortholog is 100%.

Group of orthologs #1321. Best score 137 bits
Score difference with first non-orthologous sequence - A.capsulata:137 P.pallidum:137

C0NQA0              	100.00%		D3B9K4              	100.00%
                    	       		D3B9J7              	39.27%
Bootstrap support for C0NQA0 as seed ortholog is 100%.
Bootstrap support for D3B9K4 as seed ortholog is 100%.

Group of orthologs #1322. Best score 137 bits
Score difference with first non-orthologous sequence - A.capsulata:137 P.pallidum:137

C0NTC2              	100.00%		D3AYL4              	100.00%
Bootstrap support for C0NTC2 as seed ortholog is 100%.
Bootstrap support for D3AYL4 as seed ortholog is 100%.

Group of orthologs #1323. Best score 137 bits
Score difference with first non-orthologous sequence - A.capsulata:137 P.pallidum:137

C0NW00              	100.00%		D3AY37              	100.00%
Bootstrap support for C0NW00 as seed ortholog is 100%.
Bootstrap support for D3AY37 as seed ortholog is 100%.

Group of orthologs #1324. Best score 137 bits
Score difference with first non-orthologous sequence - A.capsulata:137 P.pallidum:137

C0NYI0              	100.00%		D3B3U3              	100.00%
Bootstrap support for C0NYI0 as seed ortholog is 100%.
Bootstrap support for D3B3U3 as seed ortholog is 100%.

Group of orthologs #1325. Best score 137 bits
Score difference with first non-orthologous sequence - A.capsulata:137 P.pallidum:137

C0NCI6              	100.00%		D3BTH5              	100.00%
Bootstrap support for C0NCI6 as seed ortholog is 100%.
Bootstrap support for D3BTH5 as seed ortholog is 100%.

Group of orthologs #1326. Best score 137 bits
Score difference with first non-orthologous sequence - A.capsulata:137 P.pallidum:137

C0NYD9              	100.00%		D3B8W2              	100.00%
Bootstrap support for C0NYD9 as seed ortholog is 100%.
Bootstrap support for D3B8W2 as seed ortholog is 100%.

Group of orthologs #1327. Best score 136 bits
Score difference with first non-orthologous sequence - A.capsulata:136 P.pallidum:136

C0NE75              	100.00%		D3B4P6              	100.00%
Bootstrap support for C0NE75 as seed ortholog is 100%.
Bootstrap support for D3B4P6 as seed ortholog is 100%.

Group of orthologs #1328. Best score 136 bits
Score difference with first non-orthologous sequence - A.capsulata:136 P.pallidum:136

C0NM49              	100.00%		D3BEG4              	100.00%
Bootstrap support for C0NM49 as seed ortholog is 100%.
Bootstrap support for D3BEG4 as seed ortholog is 100%.

Group of orthologs #1329. Best score 136 bits
Score difference with first non-orthologous sequence - A.capsulata:136 P.pallidum:136

C0NWP4              	100.00%		D3BAR1              	100.00%
Bootstrap support for C0NWP4 as seed ortholog is 100%.
Bootstrap support for D3BAR1 as seed ortholog is 100%.

Group of orthologs #1330. Best score 136 bits
Score difference with first non-orthologous sequence - A.capsulata:136 P.pallidum:136

C0NSR8              	100.00%		D3BM06              	100.00%
Bootstrap support for C0NSR8 as seed ortholog is 100%.
Bootstrap support for D3BM06 as seed ortholog is 100%.

Group of orthologs #1331. Best score 135 bits
Score difference with first non-orthologous sequence - A.capsulata:82 P.pallidum:135

C0NXP2              	100.00%		D3B3A3              	100.00%
Bootstrap support for C0NXP2 as seed ortholog is 99%.
Bootstrap support for D3B3A3 as seed ortholog is 100%.

Group of orthologs #1332. Best score 134 bits
Score difference with first non-orthologous sequence - A.capsulata:134 P.pallidum:56

C0NZW1              	100.00%		D3BCG7              	100.00%
                    	       		D3BI78              	6.22%
Bootstrap support for C0NZW1 as seed ortholog is 100%.
Bootstrap support for D3BCG7 as seed ortholog is 99%.

Group of orthologs #1333. Best score 134 bits
Score difference with first non-orthologous sequence - A.capsulata:84 P.pallidum:134

C0NCQ1              	100.00%		D3AWE0              	100.00%
Bootstrap support for C0NCQ1 as seed ortholog is 100%.
Bootstrap support for D3AWE0 as seed ortholog is 100%.

Group of orthologs #1334. Best score 134 bits
Score difference with first non-orthologous sequence - A.capsulata:134 P.pallidum:134

C0NBL9              	100.00%		D3B9X9              	100.00%
Bootstrap support for C0NBL9 as seed ortholog is 100%.
Bootstrap support for D3B9X9 as seed ortholog is 100%.

Group of orthologs #1335. Best score 134 bits
Score difference with first non-orthologous sequence - A.capsulata:134 P.pallidum:134

C0NDS9              	100.00%		D3BKF7              	100.00%
Bootstrap support for C0NDS9 as seed ortholog is 100%.
Bootstrap support for D3BKF7 as seed ortholog is 100%.

Group of orthologs #1336. Best score 134 bits
Score difference with first non-orthologous sequence - A.capsulata:134 P.pallidum:134

C0NXV3              	100.00%		D3B5Z2              	100.00%
Bootstrap support for C0NXV3 as seed ortholog is 100%.
Bootstrap support for D3B5Z2 as seed ortholog is 100%.

Group of orthologs #1337. Best score 134 bits
Score difference with first non-orthologous sequence - A.capsulata:134 P.pallidum:134

C0NAG6              	100.00%		D3BVL7              	100.00%
Bootstrap support for C0NAG6 as seed ortholog is 100%.
Bootstrap support for D3BVL7 as seed ortholog is 100%.

Group of orthologs #1338. Best score 134 bits
Score difference with first non-orthologous sequence - A.capsulata:134 P.pallidum:134

C0NPN0              	100.00%		D3BL72              	100.00%
Bootstrap support for C0NPN0 as seed ortholog is 100%.
Bootstrap support for D3BL72 as seed ortholog is 100%.

Group of orthologs #1339. Best score 134 bits
Score difference with first non-orthologous sequence - A.capsulata:134 P.pallidum:19

C0P142              	100.00%		D3BIE9              	100.00%
Bootstrap support for C0P142 as seed ortholog is 100%.
Bootstrap support for D3BIE9 as seed ortholog is 67%.
Alternative seed ortholog is D3BUJ0 (19 bits away from this cluster)

Group of orthologs #1340. Best score 134 bits
Score difference with first non-orthologous sequence - A.capsulata:134 P.pallidum:134

C0NVB1              	100.00%		D3BPZ9              	100.00%
Bootstrap support for C0NVB1 as seed ortholog is 100%.
Bootstrap support for D3BPZ9 as seed ortholog is 100%.

Group of orthologs #1341. Best score 133 bits
Score difference with first non-orthologous sequence - A.capsulata:133 P.pallidum:32

C0NTD7              	100.00%		D3B201              	100.00%
                    	       		D3BPA0              	6.65%
Bootstrap support for C0NTD7 as seed ortholog is 100%.
Bootstrap support for D3B201 as seed ortholog is 91%.

Group of orthologs #1342. Best score 133 bits
Score difference with first non-orthologous sequence - A.capsulata:133 P.pallidum:133

C0NQ17              	100.00%		D3AWF3              	100.00%
Bootstrap support for C0NQ17 as seed ortholog is 100%.
Bootstrap support for D3AWF3 as seed ortholog is 100%.

Group of orthologs #1343. Best score 133 bits
Score difference with first non-orthologous sequence - A.capsulata:133 P.pallidum:133

C0NT65              	100.00%		D3B0I1              	100.00%
Bootstrap support for C0NT65 as seed ortholog is 100%.
Bootstrap support for D3B0I1 as seed ortholog is 100%.

Group of orthologs #1344. Best score 133 bits
Score difference with first non-orthologous sequence - A.capsulata:133 P.pallidum:133

C0NJY9              	100.00%		D3BB44              	100.00%
Bootstrap support for C0NJY9 as seed ortholog is 100%.
Bootstrap support for D3BB44 as seed ortholog is 100%.

Group of orthologs #1345. Best score 133 bits
Score difference with first non-orthologous sequence - A.capsulata:133 P.pallidum:133

C0NE81              	100.00%		D3BT16              	100.00%
Bootstrap support for C0NE81 as seed ortholog is 100%.
Bootstrap support for D3BT16 as seed ortholog is 100%.

Group of orthologs #1346. Best score 133 bits
Score difference with first non-orthologous sequence - A.capsulata:133 P.pallidum:133

C0NMG1              	100.00%		D3BKX3              	100.00%
Bootstrap support for C0NMG1 as seed ortholog is 100%.
Bootstrap support for D3BKX3 as seed ortholog is 100%.

Group of orthologs #1347. Best score 133 bits
Score difference with first non-orthologous sequence - A.capsulata:133 P.pallidum:133

C0P0M7              	100.00%		D3BSV7              	100.00%
Bootstrap support for C0P0M7 as seed ortholog is 100%.
Bootstrap support for D3BSV7 as seed ortholog is 100%.

Group of orthologs #1348. Best score 132 bits
Score difference with first non-orthologous sequence - A.capsulata:132 P.pallidum:132

C0NST6              	100.00%		D3B270              	100.00%
                    	       		D3BP50              	34.30%
                    	       		D3BEJ2              	14.39%
                    	       		D3AVY9              	9.36%
                    	       		D3BNB4              	5.03%
Bootstrap support for C0NST6 as seed ortholog is 100%.
Bootstrap support for D3B270 as seed ortholog is 100%.

Group of orthologs #1349. Best score 132 bits
Score difference with first non-orthologous sequence - A.capsulata:56 P.pallidum:68

C0NYR5              	100.00%		D3BQQ1              	100.00%
                    	       		D3BQQ0              	55.23%
                    	       		D3BQP6              	48.78%
                    	       		D3BTG8              	26.06%
Bootstrap support for C0NYR5 as seed ortholog is 93%.
Bootstrap support for D3BQQ1 as seed ortholog is 95%.

Group of orthologs #1350. Best score 132 bits
Score difference with first non-orthologous sequence - A.capsulata:132 P.pallidum:132

C0NR83              	100.00%		D3AW87              	100.00%
Bootstrap support for C0NR83 as seed ortholog is 100%.
Bootstrap support for D3AW87 as seed ortholog is 100%.

Group of orthologs #1351. Best score 132 bits
Score difference with first non-orthologous sequence - A.capsulata:132 P.pallidum:132

C0NZV0              	100.00%		D3AW03              	100.00%
Bootstrap support for C0NZV0 as seed ortholog is 100%.
Bootstrap support for D3AW03 as seed ortholog is 100%.

Group of orthologs #1352. Best score 132 bits
Score difference with first non-orthologous sequence - A.capsulata:132 P.pallidum:132

C0NCK5              	100.00%		D3BTS9              	100.00%
Bootstrap support for C0NCK5 as seed ortholog is 100%.
Bootstrap support for D3BTS9 as seed ortholog is 100%.

Group of orthologs #1353. Best score 132 bits
Score difference with first non-orthologous sequence - A.capsulata:38 P.pallidum:87

C0NEX4              	100.00%		D3BUV0              	100.00%
Bootstrap support for C0NEX4 as seed ortholog is 90%.
Bootstrap support for D3BUV0 as seed ortholog is 99%.

Group of orthologs #1354. Best score 132 bits
Score difference with first non-orthologous sequence - A.capsulata:132 P.pallidum:132

C0NVI1              	100.00%		D3BN10              	100.00%
Bootstrap support for C0NVI1 as seed ortholog is 100%.
Bootstrap support for D3BN10 as seed ortholog is 100%.

Group of orthologs #1355. Best score 131 bits
Score difference with first non-orthologous sequence - A.capsulata:131 P.pallidum:131

C0NC22              	100.00%		D3BBZ9              	100.00%
Bootstrap support for C0NC22 as seed ortholog is 100%.
Bootstrap support for D3BBZ9 as seed ortholog is 100%.

Group of orthologs #1356. Best score 131 bits
Score difference with first non-orthologous sequence - A.capsulata:131 P.pallidum:67

C0NIU6              	100.00%		D3B5A5              	100.00%
Bootstrap support for C0NIU6 as seed ortholog is 100%.
Bootstrap support for D3B5A5 as seed ortholog is 97%.

Group of orthologs #1357. Best score 131 bits
Score difference with first non-orthologous sequence - A.capsulata:131 P.pallidum:131

C0NQ68              	100.00%		D3AZD5              	100.00%
Bootstrap support for C0NQ68 as seed ortholog is 100%.
Bootstrap support for D3AZD5 as seed ortholog is 100%.

Group of orthologs #1358. Best score 131 bits
Score difference with first non-orthologous sequence - A.capsulata:131 P.pallidum:131

C0NM64              	100.00%		D3BFX3              	100.00%
Bootstrap support for C0NM64 as seed ortholog is 100%.
Bootstrap support for D3BFX3 as seed ortholog is 100%.

Group of orthologs #1359. Best score 131 bits
Score difference with first non-orthologous sequence - A.capsulata:131 P.pallidum:131

C0NDA9              	100.00%		D3BPS7              	100.00%
Bootstrap support for C0NDA9 as seed ortholog is 100%.
Bootstrap support for D3BPS7 as seed ortholog is 100%.

Group of orthologs #1360. Best score 131 bits
Score difference with first non-orthologous sequence - A.capsulata:131 P.pallidum:131

C0NY23              	100.00%		D3B6U5              	100.00%
Bootstrap support for C0NY23 as seed ortholog is 100%.
Bootstrap support for D3B6U5 as seed ortholog is 100%.

Group of orthologs #1361. Best score 131 bits
Score difference with first non-orthologous sequence - A.capsulata:131 P.pallidum:131

C0NG78              	100.00%		D3BQZ1              	100.00%
Bootstrap support for C0NG78 as seed ortholog is 100%.
Bootstrap support for D3BQZ1 as seed ortholog is 100%.

Group of orthologs #1362. Best score 130 bits
Score difference with first non-orthologous sequence - A.capsulata:130 P.pallidum:130

C0NMP7              	100.00%		D3AWU9              	100.00%
Bootstrap support for C0NMP7 as seed ortholog is 100%.
Bootstrap support for D3AWU9 as seed ortholog is 100%.

Group of orthologs #1363. Best score 130 bits
Score difference with first non-orthologous sequence - A.capsulata:15 P.pallidum:34

C0NVY1              	100.00%		D3B2T3              	100.00%
Bootstrap support for C0NVY1 as seed ortholog is 67%.
Alternative seed ortholog is C0NTL0 (15 bits away from this cluster)
Bootstrap support for D3B2T3 as seed ortholog is 84%.

Group of orthologs #1364. Best score 130 bits
Score difference with first non-orthologous sequence - A.capsulata:130 P.pallidum:130

C0NRL5              	100.00%		D3B9G8              	100.00%
Bootstrap support for C0NRL5 as seed ortholog is 100%.
Bootstrap support for D3B9G8 as seed ortholog is 100%.

Group of orthologs #1365. Best score 130 bits
Score difference with first non-orthologous sequence - A.capsulata:130 P.pallidum:130

C0NW08              	100.00%		D3BBA1              	100.00%
Bootstrap support for C0NW08 as seed ortholog is 100%.
Bootstrap support for D3BBA1 as seed ortholog is 100%.

Group of orthologs #1366. Best score 130 bits
Score difference with first non-orthologous sequence - A.capsulata:130 P.pallidum:130

C0NRK0              	100.00%		D3BH91              	100.00%
Bootstrap support for C0NRK0 as seed ortholog is 100%.
Bootstrap support for D3BH91 as seed ortholog is 100%.

Group of orthologs #1367. Best score 129 bits
Score difference with first non-orthologous sequence - A.capsulata:129 P.pallidum:129

C0NIT0              	100.00%		D3BI80              	100.00%
                    	       		D3AZX6              	11.29%
Bootstrap support for C0NIT0 as seed ortholog is 100%.
Bootstrap support for D3BI80 as seed ortholog is 100%.

Group of orthologs #1368. Best score 129 bits
Score difference with first non-orthologous sequence - A.capsulata:76 P.pallidum:129

C0NI24              	100.00%		D3AZN4              	100.00%
Bootstrap support for C0NI24 as seed ortholog is 98%.
Bootstrap support for D3AZN4 as seed ortholog is 100%.

Group of orthologs #1369. Best score 129 bits
Score difference with first non-orthologous sequence - A.capsulata:129 P.pallidum:129

C0NV58              	100.00%		D3B7G3              	100.00%
Bootstrap support for C0NV58 as seed ortholog is 100%.
Bootstrap support for D3B7G3 as seed ortholog is 100%.

Group of orthologs #1370. Best score 129 bits
Score difference with first non-orthologous sequence - A.capsulata:129 P.pallidum:129

C0NVW8              	100.00%		D3B9X0              	100.00%
Bootstrap support for C0NVW8 as seed ortholog is 100%.
Bootstrap support for D3B9X0 as seed ortholog is 100%.

Group of orthologs #1371. Best score 129 bits
Score difference with first non-orthologous sequence - A.capsulata:129 P.pallidum:129

C0NII2              	100.00%		D3BNU3              	100.00%
Bootstrap support for C0NII2 as seed ortholog is 100%.
Bootstrap support for D3BNU3 as seed ortholog is 100%.

Group of orthologs #1372. Best score 129 bits
Score difference with first non-orthologous sequence - A.capsulata:129 P.pallidum:129

C0NEM9              	100.00%		D3BU92              	100.00%
Bootstrap support for C0NEM9 as seed ortholog is 100%.
Bootstrap support for D3BU92 as seed ortholog is 100%.

Group of orthologs #1373. Best score 129 bits
Score difference with first non-orthologous sequence - A.capsulata:129 P.pallidum:129

C0NJG8              	100.00%		D3BQ40              	100.00%
Bootstrap support for C0NJG8 as seed ortholog is 100%.
Bootstrap support for D3BQ40 as seed ortholog is 100%.

Group of orthologs #1374. Best score 129 bits
Score difference with first non-orthologous sequence - A.capsulata:129 P.pallidum:129

C0P0X3              	100.00%		D3BE05              	100.00%
Bootstrap support for C0P0X3 as seed ortholog is 100%.
Bootstrap support for D3BE05 as seed ortholog is 100%.

Group of orthologs #1375. Best score 129 bits
Score difference with first non-orthologous sequence - A.capsulata:129 P.pallidum:129

C0NUG2              	100.00%		D3BLG3              	100.00%
Bootstrap support for C0NUG2 as seed ortholog is 100%.
Bootstrap support for D3BLG3 as seed ortholog is 100%.

Group of orthologs #1376. Best score 129 bits
Score difference with first non-orthologous sequence - A.capsulata:129 P.pallidum:129

C0NX57              	100.00%		D3BNJ5              	100.00%
Bootstrap support for C0NX57 as seed ortholog is 100%.
Bootstrap support for D3BNJ5 as seed ortholog is 100%.

Group of orthologs #1377. Best score 128 bits
Score difference with first non-orthologous sequence - A.capsulata:128 P.pallidum:128

C0NKE0              	100.00%		D3AYW3              	100.00%
C0NI30              	21.54%		D3BVF3              	55.22%
C0NRT4              	11.04%		
C0NNY0              	5.79%		
Bootstrap support for C0NKE0 as seed ortholog is 100%.
Bootstrap support for D3AYW3 as seed ortholog is 100%.

Group of orthologs #1378. Best score 128 bits
Score difference with first non-orthologous sequence - A.capsulata:128 P.pallidum:128

C0NAR8              	100.00%		D3BGV1              	100.00%
C0NQX8              	10.47%		
Bootstrap support for C0NAR8 as seed ortholog is 100%.
Bootstrap support for D3BGV1 as seed ortholog is 100%.

Group of orthologs #1379. Best score 128 bits
Score difference with first non-orthologous sequence - A.capsulata:16 P.pallidum:128

C0NU37              	100.00%		D3BL22              	100.00%
C0NFW8              	15.93%		
Bootstrap support for C0NU37 as seed ortholog is 69%.
Alternative seed ortholog is C0NXK7 (16 bits away from this cluster)
Bootstrap support for D3BL22 as seed ortholog is 100%.

Group of orthologs #1380. Best score 128 bits
Score difference with first non-orthologous sequence - A.capsulata:128 P.pallidum:128

C0NIF2              	100.00%		D3B3D4              	100.00%
Bootstrap support for C0NIF2 as seed ortholog is 100%.
Bootstrap support for D3B3D4 as seed ortholog is 100%.

Group of orthologs #1381. Best score 128 bits
Score difference with first non-orthologous sequence - A.capsulata:128 P.pallidum:128

C0NNW2              	100.00%		D3B2Q2              	100.00%
Bootstrap support for C0NNW2 as seed ortholog is 100%.
Bootstrap support for D3B2Q2 as seed ortholog is 100%.

Group of orthologs #1382. Best score 128 bits
Score difference with first non-orthologous sequence - A.capsulata:128 P.pallidum:128

C0NFF6              	100.00%		D3BD97              	100.00%
Bootstrap support for C0NFF6 as seed ortholog is 100%.
Bootstrap support for D3BD97 as seed ortholog is 100%.

Group of orthologs #1383. Best score 128 bits
Score difference with first non-orthologous sequence - A.capsulata:128 P.pallidum:128

C0NFV7              	100.00%		D3BRR6              	100.00%
Bootstrap support for C0NFV7 as seed ortholog is 100%.
Bootstrap support for D3BRR6 as seed ortholog is 100%.

Group of orthologs #1384. Best score 128 bits
Score difference with first non-orthologous sequence - A.capsulata:128 P.pallidum:128

C0NRH5              	100.00%		D3BK63              	100.00%
Bootstrap support for C0NRH5 as seed ortholog is 100%.
Bootstrap support for D3BK63 as seed ortholog is 100%.

Group of orthologs #1385. Best score 128 bits
Score difference with first non-orthologous sequence - A.capsulata:128 P.pallidum:128

C0NQL0              	100.00%		D3BUS7              	100.00%
Bootstrap support for C0NQL0 as seed ortholog is 100%.
Bootstrap support for D3BUS7 as seed ortholog is 100%.

Group of orthologs #1386. Best score 127 bits
Score difference with first non-orthologous sequence - A.capsulata:127 P.pallidum:127

C0NR20              	100.00%		D3B2B5              	100.00%
                    	       		D3B860              	16.76%
Bootstrap support for C0NR20 as seed ortholog is 100%.
Bootstrap support for D3B2B5 as seed ortholog is 100%.

Group of orthologs #1387. Best score 127 bits
Score difference with first non-orthologous sequence - A.capsulata:74 P.pallidum:127

C0NP92              	100.00%		D3B429              	100.00%
Bootstrap support for C0NP92 as seed ortholog is 98%.
Bootstrap support for D3B429 as seed ortholog is 100%.

Group of orthologs #1388. Best score 127 bits
Score difference with first non-orthologous sequence - A.capsulata:80 P.pallidum:48

C0NIW7              	100.00%		D3BFU7              	100.00%
Bootstrap support for C0NIW7 as seed ortholog is 99%.
Bootstrap support for D3BFU7 as seed ortholog is 93%.

Group of orthologs #1389. Best score 127 bits
Score difference with first non-orthologous sequence - A.capsulata:127 P.pallidum:127

C0NFM2              	100.00%		D3BNF1              	100.00%
Bootstrap support for C0NFM2 as seed ortholog is 100%.
Bootstrap support for D3BNF1 as seed ortholog is 100%.

Group of orthologs #1390. Best score 126 bits
Score difference with first non-orthologous sequence - A.capsulata:57 P.pallidum:126

C0NKK1              	100.00%		D3B1Z2              	100.00%
                    	       		D3BVQ0              	50.29%
                    	       		D3B1H8              	32.44%
                    	       		D3BC34              	29.99%
                    	       		D3BC35              	29.52%
                    	       		D3B333              	29.17%
                    	       		D3B4T3              	26.60%
                    	       		D3BRS5              	10.27%
Bootstrap support for C0NKK1 as seed ortholog is 89%.
Bootstrap support for D3B1Z2 as seed ortholog is 100%.

Group of orthologs #1391. Best score 126 bits
Score difference with first non-orthologous sequence - A.capsulata:126 P.pallidum:126

C0NJZ9              	100.00%		D3BB93              	100.00%
                    	       		D3AX42              	5.68%
Bootstrap support for C0NJZ9 as seed ortholog is 100%.
Bootstrap support for D3BB93 as seed ortholog is 100%.

Group of orthologs #1392. Best score 126 bits
Score difference with first non-orthologous sequence - A.capsulata:126 P.pallidum:126

C0NVM6              	100.00%		D3B3J0              	100.00%
                    	       		D3BK68              	9.78%
Bootstrap support for C0NVM6 as seed ortholog is 100%.
Bootstrap support for D3B3J0 as seed ortholog is 100%.

Group of orthologs #1393. Best score 126 bits
Score difference with first non-orthologous sequence - A.capsulata:126 P.pallidum:126

C0NCL2              	100.00%		D3B806              	100.00%
Bootstrap support for C0NCL2 as seed ortholog is 100%.
Bootstrap support for D3B806 as seed ortholog is 100%.

Group of orthologs #1394. Best score 126 bits
Score difference with first non-orthologous sequence - A.capsulata:126 P.pallidum:126

C0NHG1              	100.00%		D3B4H6              	100.00%
Bootstrap support for C0NHG1 as seed ortholog is 100%.
Bootstrap support for D3B4H6 as seed ortholog is 100%.

Group of orthologs #1395. Best score 126 bits
Score difference with first non-orthologous sequence - A.capsulata:126 P.pallidum:126

C0NGE3              	100.00%		D3BBQ4              	100.00%
Bootstrap support for C0NGE3 as seed ortholog is 100%.
Bootstrap support for D3BBQ4 as seed ortholog is 100%.

Group of orthologs #1396. Best score 126 bits
Score difference with first non-orthologous sequence - A.capsulata:126 P.pallidum:126

C0NQK7              	100.00%		D3B9Q4              	100.00%
Bootstrap support for C0NQK7 as seed ortholog is 100%.
Bootstrap support for D3B9Q4 as seed ortholog is 100%.

Group of orthologs #1397. Best score 126 bits
Score difference with first non-orthologous sequence - A.capsulata:126 P.pallidum:126

C0NCH7              	100.00%		D3BQD4              	100.00%
Bootstrap support for C0NCH7 as seed ortholog is 100%.
Bootstrap support for D3BQD4 as seed ortholog is 100%.

Group of orthologs #1398. Best score 126 bits
Score difference with first non-orthologous sequence - A.capsulata:18 P.pallidum:126

C0NW81              	100.00%		D3B7E2              	100.00%
Bootstrap support for C0NW81 as seed ortholog is 74%.
Alternative seed ortholog is C0NJH7 (18 bits away from this cluster)
Bootstrap support for D3B7E2 as seed ortholog is 100%.

Group of orthologs #1399. Best score 126 bits
Score difference with first non-orthologous sequence - A.capsulata:64 P.pallidum:10

C0NNL5              	100.00%		D3BJX5              	100.00%
Bootstrap support for C0NNL5 as seed ortholog is 76%.
Bootstrap support for D3BJX5 as seed ortholog is 60%.
Alternative seed ortholog is D3B6E0 (10 bits away from this cluster)

Group of orthologs #1400. Best score 126 bits
Score difference with first non-orthologous sequence - A.capsulata:126 P.pallidum:126

C0NM32              	100.00%		D3BPW7              	100.00%
Bootstrap support for C0NM32 as seed ortholog is 100%.
Bootstrap support for D3BPW7 as seed ortholog is 100%.

Group of orthologs #1401. Best score 126 bits
Score difference with first non-orthologous sequence - A.capsulata:38 P.pallidum:29

C0NLI6              	100.00%		D3BQS8              	100.00%
Bootstrap support for C0NLI6 as seed ortholog is 93%.
Bootstrap support for D3BQS8 as seed ortholog is 87%.

Group of orthologs #1402. Best score 125 bits
Score difference with first non-orthologous sequence - A.capsulata:125 P.pallidum:125

C0NAN8              	100.00%		D3BGR2              	100.00%
Bootstrap support for C0NAN8 as seed ortholog is 100%.
Bootstrap support for D3BGR2 as seed ortholog is 100%.

Group of orthologs #1403. Best score 125 bits
Score difference with first non-orthologous sequence - A.capsulata:23 P.pallidum:67

C0NP25              	100.00%		D3B3P3              	100.00%
Bootstrap support for C0NP25 as seed ortholog is 80%.
Bootstrap support for D3B3P3 as seed ortholog is 98%.

Group of orthologs #1404. Best score 125 bits
Score difference with first non-orthologous sequence - A.capsulata:125 P.pallidum:35

C0NM86              	100.00%		D3BAK3              	100.00%
Bootstrap support for C0NM86 as seed ortholog is 100%.
Bootstrap support for D3BAK3 as seed ortholog is 99%.

Group of orthologs #1405. Best score 125 bits
Score difference with first non-orthologous sequence - A.capsulata:125 P.pallidum:125

C0NBQ4              	100.00%		D3BV18              	100.00%
Bootstrap support for C0NBQ4 as seed ortholog is 100%.
Bootstrap support for D3BV18 as seed ortholog is 100%.

Group of orthologs #1406. Best score 125 bits
Score difference with first non-orthologous sequence - A.capsulata:18 P.pallidum:125

C0NYS0              	100.00%		D3BE16              	100.00%
Bootstrap support for C0NYS0 as seed ortholog is 66%.
Alternative seed ortholog is C0NIT3 (18 bits away from this cluster)
Bootstrap support for D3BE16 as seed ortholog is 100%.

Group of orthologs #1407. Best score 124 bits
Score difference with first non-orthologous sequence - A.capsulata:124 P.pallidum:124

C0NIW1              	100.00%		D3B062              	100.00%
Bootstrap support for C0NIW1 as seed ortholog is 100%.
Bootstrap support for D3B062 as seed ortholog is 100%.

Group of orthologs #1408. Best score 124 bits
Score difference with first non-orthologous sequence - A.capsulata:124 P.pallidum:124

C0NFJ6              	100.00%		D3B5T6              	100.00%
Bootstrap support for C0NFJ6 as seed ortholog is 100%.
Bootstrap support for D3B5T6 as seed ortholog is 100%.

Group of orthologs #1409. Best score 124 bits
Score difference with first non-orthologous sequence - A.capsulata:80 P.pallidum:124

C0NMQ0              	100.00%		D3B5S1              	100.00%
Bootstrap support for C0NMQ0 as seed ortholog is 99%.
Bootstrap support for D3B5S1 as seed ortholog is 100%.

Group of orthologs #1410. Best score 124 bits
Score difference with first non-orthologous sequence - A.capsulata:124 P.pallidum:124

C0P0V8              	100.00%		D3B6E6              	100.00%
Bootstrap support for C0P0V8 as seed ortholog is 100%.
Bootstrap support for D3B6E6 as seed ortholog is 100%.

Group of orthologs #1411. Best score 124 bits
Score difference with first non-orthologous sequence - A.capsulata:124 P.pallidum:124

C0NFT6              	100.00%		D3BSZ7              	100.00%
Bootstrap support for C0NFT6 as seed ortholog is 100%.
Bootstrap support for D3BSZ7 as seed ortholog is 100%.

Group of orthologs #1412. Best score 124 bits
Score difference with first non-orthologous sequence - A.capsulata:124 P.pallidum:124

C0NYM9              	100.00%		D3BHL7              	100.00%
Bootstrap support for C0NYM9 as seed ortholog is 100%.
Bootstrap support for D3BHL7 as seed ortholog is 100%.

Group of orthologs #1413. Best score 123 bits
Score difference with first non-orthologous sequence - A.capsulata:123 P.pallidum:123

C0NFC3              	100.00%		D3B7B3              	100.00%
Bootstrap support for C0NFC3 as seed ortholog is 100%.
Bootstrap support for D3B7B3 as seed ortholog is 100%.

Group of orthologs #1414. Best score 123 bits
Score difference with first non-orthologous sequence - A.capsulata:123 P.pallidum:123

C0P0M6              	100.00%		D3B6L1              	100.00%
Bootstrap support for C0P0M6 as seed ortholog is 100%.
Bootstrap support for D3B6L1 as seed ortholog is 100%.

Group of orthologs #1415. Best score 123 bits
Score difference with first non-orthologous sequence - A.capsulata:123 P.pallidum:123

C0NSC1              	100.00%		D3BLV0              	100.00%
Bootstrap support for C0NSC1 as seed ortholog is 100%.
Bootstrap support for D3BLV0 as seed ortholog is 100%.

Group of orthologs #1416. Best score 123 bits
Score difference with first non-orthologous sequence - A.capsulata:123 P.pallidum:123

C0NTN7              	100.00%		D3BLS8              	100.00%
Bootstrap support for C0NTN7 as seed ortholog is 100%.
Bootstrap support for D3BLS8 as seed ortholog is 100%.

Group of orthologs #1417. Best score 122 bits
Score difference with first non-orthologous sequence - A.capsulata:122 P.pallidum:122

C0NI22              	100.00%		D3AYE2              	100.00%
Bootstrap support for C0NI22 as seed ortholog is 100%.
Bootstrap support for D3AYE2 as seed ortholog is 100%.

Group of orthologs #1418. Best score 122 bits
Score difference with first non-orthologous sequence - A.capsulata:122 P.pallidum:122

C0NGR9              	100.00%		D3B137              	100.00%
Bootstrap support for C0NGR9 as seed ortholog is 100%.
Bootstrap support for D3B137 as seed ortholog is 100%.

Group of orthologs #1419. Best score 122 bits
Score difference with first non-orthologous sequence - A.capsulata:63 P.pallidum:56

C0NJ62              	100.00%		D3B1P2              	100.00%
Bootstrap support for C0NJ62 as seed ortholog is 99%.
Bootstrap support for D3B1P2 as seed ortholog is 97%.

Group of orthologs #1420. Best score 122 bits
Score difference with first non-orthologous sequence - A.capsulata:122 P.pallidum:122

C0NN14              	100.00%		D3B3X0              	100.00%
Bootstrap support for C0NN14 as seed ortholog is 100%.
Bootstrap support for D3B3X0 as seed ortholog is 100%.

Group of orthologs #1421. Best score 122 bits
Score difference with first non-orthologous sequence - A.capsulata:122 P.pallidum:122

C0NAI7              	100.00%		D3BTK0              	100.00%
Bootstrap support for C0NAI7 as seed ortholog is 100%.
Bootstrap support for D3BTK0 as seed ortholog is 100%.

Group of orthologs #1422. Best score 122 bits
Score difference with first non-orthologous sequence - A.capsulata:122 P.pallidum:122

C0NPC0              	100.00%		D3BK19              	100.00%
Bootstrap support for C0NPC0 as seed ortholog is 100%.
Bootstrap support for D3BK19 as seed ortholog is 100%.

Group of orthologs #1423. Best score 122 bits
Score difference with first non-orthologous sequence - A.capsulata:122 P.pallidum:39

C0NRM5              	100.00%		D3BIF0              	100.00%
Bootstrap support for C0NRM5 as seed ortholog is 100%.
Bootstrap support for D3BIF0 as seed ortholog is 87%.

Group of orthologs #1424. Best score 122 bits
Score difference with first non-orthologous sequence - A.capsulata:122 P.pallidum:122

C0NMW8              	100.00%		D3BV55              	100.00%
Bootstrap support for C0NMW8 as seed ortholog is 100%.
Bootstrap support for D3BV55 as seed ortholog is 100%.

Group of orthologs #1425. Best score 122 bits
Score difference with first non-orthologous sequence - A.capsulata:122 P.pallidum:21

C0NZ93              	100.00%		D3BTM8              	100.00%
Bootstrap support for C0NZ93 as seed ortholog is 100%.
Bootstrap support for D3BTM8 as seed ortholog is 94%.

Group of orthologs #1426. Best score 121 bits
Score difference with first non-orthologous sequence - A.capsulata:64 P.pallidum:121

C0NDL5              	100.00%		D3B5N8              	100.00%
Bootstrap support for C0NDL5 as seed ortholog is 85%.
Bootstrap support for D3B5N8 as seed ortholog is 100%.

Group of orthologs #1427. Best score 121 bits
Score difference with first non-orthologous sequence - A.capsulata:121 P.pallidum:121

C0NNX9              	100.00%		D3AVR2              	100.00%
Bootstrap support for C0NNX9 as seed ortholog is 100%.
Bootstrap support for D3AVR2 as seed ortholog is 100%.

Group of orthologs #1428. Best score 121 bits
Score difference with first non-orthologous sequence - A.capsulata:121 P.pallidum:121

C0NPD3              	100.00%		D3B6M1              	100.00%
Bootstrap support for C0NPD3 as seed ortholog is 100%.
Bootstrap support for D3B6M1 as seed ortholog is 100%.

Group of orthologs #1429. Best score 121 bits
Score difference with first non-orthologous sequence - A.capsulata:121 P.pallidum:121

C0NB33              	100.00%		D3BM86              	100.00%
Bootstrap support for C0NB33 as seed ortholog is 100%.
Bootstrap support for D3BM86 as seed ortholog is 100%.

Group of orthologs #1430. Best score 121 bits
Score difference with first non-orthologous sequence - A.capsulata:23 P.pallidum:46

C0NYF8              	100.00%		D3BUZ6              	100.00%
Bootstrap support for C0NYF8 as seed ortholog is 70%.
Alternative seed ortholog is C0NB29 (23 bits away from this cluster)
Bootstrap support for D3BUZ6 as seed ortholog is 81%.

Group of orthologs #1431. Best score 120 bits
Score difference with first non-orthologous sequence - A.capsulata:120 P.pallidum:120

C0NCU3              	100.00%		D3B9I5              	100.00%
Bootstrap support for C0NCU3 as seed ortholog is 100%.
Bootstrap support for D3B9I5 as seed ortholog is 100%.

Group of orthologs #1432. Best score 120 bits
Score difference with first non-orthologous sequence - A.capsulata:69 P.pallidum:78

C0NHV4              	100.00%		D3B703              	100.00%
Bootstrap support for C0NHV4 as seed ortholog is 97%.
Bootstrap support for D3B703 as seed ortholog is 99%.

Group of orthologs #1433. Best score 120 bits
Score difference with first non-orthologous sequence - A.capsulata:120 P.pallidum:120

C0NE86              	100.00%		D3BAT1              	100.00%
Bootstrap support for C0NE86 as seed ortholog is 100%.
Bootstrap support for D3BAT1 as seed ortholog is 100%.

Group of orthologs #1434. Best score 120 bits
Score difference with first non-orthologous sequence - A.capsulata:120 P.pallidum:120

C0NRX6              	100.00%		D3BLZ9              	100.00%
Bootstrap support for C0NRX6 as seed ortholog is 100%.
Bootstrap support for D3BLZ9 as seed ortholog is 100%.

Group of orthologs #1435. Best score 119 bits
Score difference with first non-orthologous sequence - A.capsulata:119 P.pallidum:119

C0NGM3              	100.00%		D3B559              	100.00%
                    	       		D3B560              	31.02%
Bootstrap support for C0NGM3 as seed ortholog is 100%.
Bootstrap support for D3B559 as seed ortholog is 100%.

Group of orthologs #1436. Best score 119 bits
Score difference with first non-orthologous sequence - A.capsulata:119 P.pallidum:119

C0NFF5              	100.00%		D3B1P5              	100.00%
Bootstrap support for C0NFF5 as seed ortholog is 100%.
Bootstrap support for D3B1P5 as seed ortholog is 100%.

Group of orthologs #1437. Best score 119 bits
Score difference with first non-orthologous sequence - A.capsulata:119 P.pallidum:119

C0NMT3              	100.00%		D3BB36              	100.00%
Bootstrap support for C0NMT3 as seed ortholog is 100%.
Bootstrap support for D3BB36 as seed ortholog is 100%.

Group of orthologs #1438. Best score 119 bits
Score difference with first non-orthologous sequence - A.capsulata:119 P.pallidum:119

C0NZU4              	100.00%		D3B500              	100.00%
Bootstrap support for C0NZU4 as seed ortholog is 100%.
Bootstrap support for D3B500 as seed ortholog is 100%.

Group of orthologs #1439. Best score 118 bits
Score difference with first non-orthologous sequence - A.capsulata:44 P.pallidum:118

C0NE18              	100.00%		D3BSP2              	100.00%
                    	       		D3BSP5              	90.39%
                    	       		D3AZN6              	39.74%
                    	       		D3AZN7              	28.72%
Bootstrap support for C0NE18 as seed ortholog is 74%.
Alternative seed ortholog is C0NXJ9 (44 bits away from this cluster)
Bootstrap support for D3BSP2 as seed ortholog is 100%.

Group of orthologs #1440. Best score 118 bits
Score difference with first non-orthologous sequence - A.capsulata:118 P.pallidum:118

C0NZE2              	100.00%		D3B5Q0              	100.00%
C0NJF7              	12.50%		
Bootstrap support for C0NZE2 as seed ortholog is 100%.
Bootstrap support for D3B5Q0 as seed ortholog is 100%.

Group of orthologs #1441. Best score 118 bits
Score difference with first non-orthologous sequence - A.capsulata:118 P.pallidum:118

C0NC81              	100.00%		D3B413              	100.00%
Bootstrap support for C0NC81 as seed ortholog is 100%.
Bootstrap support for D3B413 as seed ortholog is 100%.

Group of orthologs #1442. Best score 118 bits
Score difference with first non-orthologous sequence - A.capsulata:118 P.pallidum:118

C0NJ41              	100.00%		D3B1V3              	100.00%
Bootstrap support for C0NJ41 as seed ortholog is 100%.
Bootstrap support for D3B1V3 as seed ortholog is 100%.

Group of orthologs #1443. Best score 118 bits
Score difference with first non-orthologous sequence - A.capsulata:118 P.pallidum:118

C0NDR7              	100.00%		D3BAC3              	100.00%
Bootstrap support for C0NDR7 as seed ortholog is 100%.
Bootstrap support for D3BAC3 as seed ortholog is 100%.

Group of orthologs #1444. Best score 118 bits
Score difference with first non-orthologous sequence - A.capsulata:118 P.pallidum:47

C0NYQ1              	100.00%		D3B341              	100.00%
Bootstrap support for C0NYQ1 as seed ortholog is 100%.
Bootstrap support for D3B341 as seed ortholog is 70%.
Alternative seed ortholog is D3BU16 (47 bits away from this cluster)

Group of orthologs #1445. Best score 118 bits
Score difference with first non-orthologous sequence - A.capsulata:118 P.pallidum:118

C0NLB2              	100.00%		D3BHM0              	100.00%
Bootstrap support for C0NLB2 as seed ortholog is 100%.
Bootstrap support for D3BHM0 as seed ortholog is 100%.

Group of orthologs #1446. Best score 118 bits
Score difference with first non-orthologous sequence - A.capsulata:118 P.pallidum:118

C0NWC3              	100.00%		D3B863              	100.00%
Bootstrap support for C0NWC3 as seed ortholog is 100%.
Bootstrap support for D3B863 as seed ortholog is 100%.

Group of orthologs #1447. Best score 118 bits
Score difference with first non-orthologous sequence - A.capsulata:118 P.pallidum:118

C0NM02              	100.00%		D3BR67              	100.00%
Bootstrap support for C0NM02 as seed ortholog is 100%.
Bootstrap support for D3BR67 as seed ortholog is 100%.

Group of orthologs #1448. Best score 118 bits
Score difference with first non-orthologous sequence - A.capsulata:118 P.pallidum:118

C0NQ04              	100.00%		D3BR96              	100.00%
Bootstrap support for C0NQ04 as seed ortholog is 100%.
Bootstrap support for D3BR96 as seed ortholog is 100%.

Group of orthologs #1449. Best score 118 bits
Score difference with first non-orthologous sequence - A.capsulata:118 P.pallidum:51

C0NRP4              	100.00%		D3BSG7              	100.00%
Bootstrap support for C0NRP4 as seed ortholog is 100%.
Bootstrap support for D3BSG7 as seed ortholog is 95%.

Group of orthologs #1450. Best score 117 bits
Score difference with first non-orthologous sequence - A.capsulata:117 P.pallidum:70

C0ND94              	100.00%		D3AXK3              	100.00%
Bootstrap support for C0ND94 as seed ortholog is 100%.
Bootstrap support for D3AXK3 as seed ortholog is 99%.

Group of orthologs #1451. Best score 117 bits
Score difference with first non-orthologous sequence - A.capsulata:117 P.pallidum:117

C0NBB0              	100.00%		D3B2Q4              	100.00%
Bootstrap support for C0NBB0 as seed ortholog is 100%.
Bootstrap support for D3B2Q4 as seed ortholog is 100%.

Group of orthologs #1452. Best score 117 bits
Score difference with first non-orthologous sequence - A.capsulata:117 P.pallidum:117

C0NKN0              	100.00%		D3AZG3              	100.00%
Bootstrap support for C0NKN0 as seed ortholog is 100%.
Bootstrap support for D3AZG3 as seed ortholog is 100%.

Group of orthologs #1453. Best score 117 bits
Score difference with first non-orthologous sequence - A.capsulata:117 P.pallidum:117

C0NFX0              	100.00%		D3B6V9              	100.00%
Bootstrap support for C0NFX0 as seed ortholog is 100%.
Bootstrap support for D3B6V9 as seed ortholog is 100%.

Group of orthologs #1454. Best score 117 bits
Score difference with first non-orthologous sequence - A.capsulata:117 P.pallidum:117

C0NSG9              	100.00%		D3BAK8              	100.00%
Bootstrap support for C0NSG9 as seed ortholog is 100%.
Bootstrap support for D3BAK8 as seed ortholog is 100%.

Group of orthologs #1455. Best score 116 bits
Score difference with first non-orthologous sequence - A.capsulata:116 P.pallidum:116

C0NSX5              	100.00%		D3BDR5              	100.00%
                    	       		D3BV49              	6.25%
Bootstrap support for C0NSX5 as seed ortholog is 100%.
Bootstrap support for D3BDR5 as seed ortholog is 100%.

Group of orthologs #1456. Best score 116 bits
Score difference with first non-orthologous sequence - A.capsulata:116 P.pallidum:116

C0NJM1              	100.00%		D3B0P0              	100.00%
Bootstrap support for C0NJM1 as seed ortholog is 100%.
Bootstrap support for D3B0P0 as seed ortholog is 100%.

Group of orthologs #1457. Best score 116 bits
Score difference with first non-orthologous sequence - A.capsulata:116 P.pallidum:116

C0P081              	100.00%		D3AZX3              	100.00%
Bootstrap support for C0P081 as seed ortholog is 100%.
Bootstrap support for D3AZX3 as seed ortholog is 100%.

Group of orthologs #1458. Best score 116 bits
Score difference with first non-orthologous sequence - A.capsulata:116 P.pallidum:116

C0NAQ8              	100.00%		D3BS25              	100.00%
Bootstrap support for C0NAQ8 as seed ortholog is 100%.
Bootstrap support for D3BS25 as seed ortholog is 100%.

Group of orthologs #1459. Best score 116 bits
Score difference with first non-orthologous sequence - A.capsulata:116 P.pallidum:116

C0NHU7              	100.00%		D3BM04              	100.00%
Bootstrap support for C0NHU7 as seed ortholog is 100%.
Bootstrap support for D3BM04 as seed ortholog is 100%.

Group of orthologs #1460. Best score 116 bits
Score difference with first non-orthologous sequence - A.capsulata:116 P.pallidum:116

C0NPF4              	100.00%		D3BGP2              	100.00%
Bootstrap support for C0NPF4 as seed ortholog is 100%.
Bootstrap support for D3BGP2 as seed ortholog is 100%.

Group of orthologs #1461. Best score 116 bits
Score difference with first non-orthologous sequence - A.capsulata:116 P.pallidum:116

C0NXJ7              	100.00%		D3BAI0              	100.00%
Bootstrap support for C0NXJ7 as seed ortholog is 100%.
Bootstrap support for D3BAI0 as seed ortholog is 100%.

Group of orthologs #1462. Best score 116 bits
Score difference with first non-orthologous sequence - A.capsulata:116 P.pallidum:116

C0NZX0              	100.00%		D3BEL7              	100.00%
Bootstrap support for C0NZX0 as seed ortholog is 100%.
Bootstrap support for D3BEL7 as seed ortholog is 100%.

Group of orthologs #1463. Best score 116 bits
Score difference with first non-orthologous sequence - A.capsulata:116 P.pallidum:116

C0NZZ2              	100.00%		D3BF17              	100.00%
Bootstrap support for C0NZZ2 as seed ortholog is 100%.
Bootstrap support for D3BF17 as seed ortholog is 100%.

Group of orthologs #1464. Best score 116 bits
Score difference with first non-orthologous sequence - A.capsulata:116 P.pallidum:116

C0NNG5              	100.00%		D3BTM7              	100.00%
Bootstrap support for C0NNG5 as seed ortholog is 100%.
Bootstrap support for D3BTM7 as seed ortholog is 100%.

Group of orthologs #1465. Best score 116 bits
Score difference with first non-orthologous sequence - A.capsulata:116 P.pallidum:116

C0NQ42              	100.00%		D3BUI8              	100.00%
Bootstrap support for C0NQ42 as seed ortholog is 100%.
Bootstrap support for D3BUI8 as seed ortholog is 100%.

Group of orthologs #1466. Best score 116 bits
Score difference with first non-orthologous sequence - A.capsulata:116 P.pallidum:116

C0NZU6              	100.00%		D3BUI7              	100.00%
Bootstrap support for C0NZU6 as seed ortholog is 100%.
Bootstrap support for D3BUI7 as seed ortholog is 100%.

Group of orthologs #1467. Best score 115 bits
Score difference with first non-orthologous sequence - A.capsulata:115 P.pallidum:115

C0NK73              	100.00%		D3AZD1              	100.00%
Bootstrap support for C0NK73 as seed ortholog is 100%.
Bootstrap support for D3AZD1 as seed ortholog is 100%.

Group of orthologs #1468. Best score 115 bits
Score difference with first non-orthologous sequence - A.capsulata:70 P.pallidum:39

C0NG16              	100.00%		D3B6S0              	100.00%
Bootstrap support for C0NG16 as seed ortholog is 95%.
Bootstrap support for D3B6S0 as seed ortholog is 86%.

Group of orthologs #1469. Best score 115 bits
Score difference with first non-orthologous sequence - A.capsulata:115 P.pallidum:115

C0NLG3              	100.00%		D3B6T6              	100.00%
Bootstrap support for C0NLG3 as seed ortholog is 100%.
Bootstrap support for D3B6T6 as seed ortholog is 100%.

Group of orthologs #1470. Best score 115 bits
Score difference with first non-orthologous sequence - A.capsulata:115 P.pallidum:115

C0NBJ7              	100.00%		D3BUG2              	100.00%
Bootstrap support for C0NBJ7 as seed ortholog is 100%.
Bootstrap support for D3BUG2 as seed ortholog is 100%.

Group of orthologs #1471. Best score 115 bits
Score difference with first non-orthologous sequence - A.capsulata:56 P.pallidum:115

C0P0L2              	100.00%		D3BNU2              	100.00%
Bootstrap support for C0P0L2 as seed ortholog is 88%.
Bootstrap support for D3BNU2 as seed ortholog is 100%.

Group of orthologs #1472. Best score 114 bits
Score difference with first non-orthologous sequence - A.capsulata:114 P.pallidum:114

C0NBI5              	100.00%		D3B2Q7              	100.00%
C0NSV7              	13.97%		
Bootstrap support for C0NBI5 as seed ortholog is 100%.
Bootstrap support for D3B2Q7 as seed ortholog is 100%.

Group of orthologs #1473. Best score 114 bits
Score difference with first non-orthologous sequence - A.capsulata:114 P.pallidum:114

C0NCP3              	100.00%		D3AZM6              	100.00%
Bootstrap support for C0NCP3 as seed ortholog is 100%.
Bootstrap support for D3AZM6 as seed ortholog is 100%.

Group of orthologs #1474. Best score 114 bits
Score difference with first non-orthologous sequence - A.capsulata:114 P.pallidum:114

C0NE64              	100.00%		D3BJ34              	100.00%
Bootstrap support for C0NE64 as seed ortholog is 100%.
Bootstrap support for D3BJ34 as seed ortholog is 100%.

Group of orthologs #1475. Best score 114 bits
Score difference with first non-orthologous sequence - A.capsulata:114 P.pallidum:114

C0NKB6              	100.00%		D3BEW0              	100.00%
Bootstrap support for C0NKB6 as seed ortholog is 100%.
Bootstrap support for D3BEW0 as seed ortholog is 100%.

Group of orthologs #1476. Best score 114 bits
Score difference with first non-orthologous sequence - A.capsulata:114 P.pallidum:114

C0NG34              	100.00%		D3BNX0              	100.00%
Bootstrap support for C0NG34 as seed ortholog is 100%.
Bootstrap support for D3BNX0 as seed ortholog is 100%.

Group of orthologs #1477. Best score 114 bits
Score difference with first non-orthologous sequence - A.capsulata:71 P.pallidum:114

C0NFH9              	100.00%		D3BUE2              	100.00%
Bootstrap support for C0NFH9 as seed ortholog is 100%.
Bootstrap support for D3BUE2 as seed ortholog is 100%.

Group of orthologs #1478. Best score 114 bits
Score difference with first non-orthologous sequence - A.capsulata:114 P.pallidum:43

C0NSY3              	100.00%		D3BHH6              	100.00%
Bootstrap support for C0NSY3 as seed ortholog is 100%.
Bootstrap support for D3BHH6 as seed ortholog is 94%.

Group of orthologs #1479. Best score 114 bits
Score difference with first non-orthologous sequence - A.capsulata:114 P.pallidum:114

C0NGY4              	100.00%		D3BUZ0              	100.00%
Bootstrap support for C0NGY4 as seed ortholog is 100%.
Bootstrap support for D3BUZ0 as seed ortholog is 100%.

Group of orthologs #1480. Best score 113 bits
Score difference with first non-orthologous sequence - A.capsulata:113 P.pallidum:113

C0NFK1              	100.00%		D3B2C2              	100.00%
Bootstrap support for C0NFK1 as seed ortholog is 100%.
Bootstrap support for D3B2C2 as seed ortholog is 100%.

Group of orthologs #1481. Best score 113 bits
Score difference with first non-orthologous sequence - A.capsulata:113 P.pallidum:113

C0NHQ9              	100.00%		D3B7S1              	100.00%
Bootstrap support for C0NHQ9 as seed ortholog is 100%.
Bootstrap support for D3B7S1 as seed ortholog is 100%.

Group of orthologs #1482. Best score 113 bits
Score difference with first non-orthologous sequence - A.capsulata:113 P.pallidum:113

C0NIJ3              	100.00%		D3BR34              	100.00%
Bootstrap support for C0NIJ3 as seed ortholog is 100%.
Bootstrap support for D3BR34 as seed ortholog is 100%.

Group of orthologs #1483. Best score 112 bits
Score difference with first non-orthologous sequence - A.capsulata:26 P.pallidum:112

C0P036              	100.00%		D3B1N0              	100.00%
C0NKH3              	16.00%		D3BHN0              	29.54%
                    	       		D3BGN7              	12.99%
Bootstrap support for C0P036 as seed ortholog is 82%.
Bootstrap support for D3B1N0 as seed ortholog is 100%.

Group of orthologs #1484. Best score 112 bits
Score difference with first non-orthologous sequence - A.capsulata:112 P.pallidum:112

C0NQS7              	100.00%		D3B3M0              	100.00%
Bootstrap support for C0NQS7 as seed ortholog is 100%.
Bootstrap support for D3B3M0 as seed ortholog is 100%.

Group of orthologs #1485. Best score 112 bits
Score difference with first non-orthologous sequence - A.capsulata:112 P.pallidum:112

C0P0R0              	100.00%		D3B044              	100.00%
Bootstrap support for C0P0R0 as seed ortholog is 100%.
Bootstrap support for D3B044 as seed ortholog is 100%.

Group of orthologs #1486. Best score 112 bits
Score difference with first non-orthologous sequence - A.capsulata:12 P.pallidum:112

C0NBA1              	100.00%		D3BPV0              	100.00%
Bootstrap support for C0NBA1 as seed ortholog is 68%.
Alternative seed ortholog is C0NJQ3 (12 bits away from this cluster)
Bootstrap support for D3BPV0 as seed ortholog is 100%.

Group of orthologs #1487. Best score 112 bits
Score difference with first non-orthologous sequence - A.capsulata:112 P.pallidum:112

C0NEM7              	100.00%		D3BMB1              	100.00%
Bootstrap support for C0NEM7 as seed ortholog is 100%.
Bootstrap support for D3BMB1 as seed ortholog is 100%.

Group of orthologs #1488. Best score 112 bits
Score difference with first non-orthologous sequence - A.capsulata:62 P.pallidum:112

C0NS80              	100.00%		D3BGE0              	100.00%
Bootstrap support for C0NS80 as seed ortholog is 99%.
Bootstrap support for D3BGE0 as seed ortholog is 100%.

Group of orthologs #1489. Best score 112 bits
Score difference with first non-orthologous sequence - A.capsulata:112 P.pallidum:112

C0NWW2              	100.00%		D3BDR7              	100.00%
Bootstrap support for C0NWW2 as seed ortholog is 100%.
Bootstrap support for D3BDR7 as seed ortholog is 100%.

Group of orthologs #1490. Best score 112 bits
Score difference with first non-orthologous sequence - A.capsulata:112 P.pallidum:112

C0NS20              	100.00%		D3BIR9              	100.00%
Bootstrap support for C0NS20 as seed ortholog is 100%.
Bootstrap support for D3BIR9 as seed ortholog is 100%.

Group of orthologs #1491. Best score 112 bits
Score difference with first non-orthologous sequence - A.capsulata:112 P.pallidum:112

C0NSG1              	100.00%		D3BKE4              	100.00%
Bootstrap support for C0NSG1 as seed ortholog is 100%.
Bootstrap support for D3BKE4 as seed ortholog is 100%.

Group of orthologs #1492. Best score 112 bits
Score difference with first non-orthologous sequence - A.capsulata:112 P.pallidum:112

C0NRZ0              	100.00%		D3BMB4              	100.00%
Bootstrap support for C0NRZ0 as seed ortholog is 100%.
Bootstrap support for D3BMB4 as seed ortholog is 100%.

Group of orthologs #1493. Best score 112 bits
Score difference with first non-orthologous sequence - A.capsulata:112 P.pallidum:112

C0NRS8              	100.00%		D3BTN8              	100.00%
Bootstrap support for C0NRS8 as seed ortholog is 100%.
Bootstrap support for D3BTN8 as seed ortholog is 100%.

Group of orthologs #1494. Best score 111 bits
Score difference with first non-orthologous sequence - A.capsulata:111 P.pallidum:111

C0NV81              	100.00%		D3BIJ4              	100.00%
                    	       		D3B1Q9              	8.16%
Bootstrap support for C0NV81 as seed ortholog is 100%.
Bootstrap support for D3BIJ4 as seed ortholog is 100%.

Group of orthologs #1495. Best score 111 bits
Score difference with first non-orthologous sequence - A.capsulata:111 P.pallidum:111

C0NBV7              	100.00%		D3AXJ9              	100.00%
Bootstrap support for C0NBV7 as seed ortholog is 100%.
Bootstrap support for D3AXJ9 as seed ortholog is 100%.

Group of orthologs #1496. Best score 111 bits
Score difference with first non-orthologous sequence - A.capsulata:39 P.pallidum:111

C0NBT4              	100.00%		D3BFX1              	100.00%
Bootstrap support for C0NBT4 as seed ortholog is 93%.
Bootstrap support for D3BFX1 as seed ortholog is 100%.

Group of orthologs #1497. Best score 111 bits
Score difference with first non-orthologous sequence - A.capsulata:111 P.pallidum:111

C0NBC8              	100.00%		D3BR85              	100.00%
Bootstrap support for C0NBC8 as seed ortholog is 100%.
Bootstrap support for D3BR85 as seed ortholog is 100%.

Group of orthologs #1498. Best score 111 bits
Score difference with first non-orthologous sequence - A.capsulata:111 P.pallidum:111

C0NZD2              	100.00%		D3B9Y5              	100.00%
Bootstrap support for C0NZD2 as seed ortholog is 100%.
Bootstrap support for D3B9Y5 as seed ortholog is 100%.

Group of orthologs #1499. Best score 111 bits
Score difference with first non-orthologous sequence - A.capsulata:43 P.pallidum:9

C0NQ48              	100.00%		D3BNE2              	100.00%
Bootstrap support for C0NQ48 as seed ortholog is 53%.
Alternative seed ortholog is C0NWV0 (43 bits away from this cluster)
Bootstrap support for D3BNE2 as seed ortholog is 80%.

Group of orthologs #1500. Best score 111 bits
Score difference with first non-orthologous sequence - A.capsulata:111 P.pallidum:111

C0NL45              	100.00%		D3BU39              	100.00%
Bootstrap support for C0NL45 as seed ortholog is 100%.
Bootstrap support for D3BU39 as seed ortholog is 100%.

Group of orthologs #1501. Best score 110 bits
Score difference with first non-orthologous sequence - A.capsulata:110 P.pallidum:11

C0NYA8              	100.00%		D3B4F2              	100.00%
C0NVM8              	10.32%		D3BTS1              	23.56%
C0P1A2              	10.07%		D3B4F1              	6.15%
C0NYI9              	8.09%		
C0NX51              	6.77%		
Bootstrap support for C0NYA8 as seed ortholog is 100%.
Bootstrap support for D3B4F2 as seed ortholog is 62%.
Alternative seed ortholog is D3AVR4 (11 bits away from this cluster)

Group of orthologs #1502. Best score 110 bits
Score difference with first non-orthologous sequence - A.capsulata:110 P.pallidum:110

C0NZ69              	100.00%		D3B4B0              	100.00%
                    	       		D3B458              	41.10%
Bootstrap support for C0NZ69 as seed ortholog is 100%.
Bootstrap support for D3B4B0 as seed ortholog is 100%.

Group of orthologs #1503. Best score 110 bits
Score difference with first non-orthologous sequence - A.capsulata:110 P.pallidum:110

C0NV31              	100.00%		D3BK76              	100.00%
Bootstrap support for C0NV31 as seed ortholog is 100%.
Bootstrap support for D3BK76 as seed ortholog is 100%.

Group of orthologs #1504. Best score 109 bits
Score difference with first non-orthologous sequence - A.capsulata:30 P.pallidum:22

C0NWR1              	100.00%		D3B5Y3              	100.00%
C0NBN2              	7.29%		D3B5Y4              	34.19%
C0NCB7              	5.52%		D3BDA4              	12.96%
C0NTC3              	5.41%		
C0NT71              	5.19%		
Bootstrap support for C0NWR1 as seed ortholog is 81%.
Bootstrap support for D3B5Y3 as seed ortholog is 70%.
Alternative seed ortholog is D3BUV5 (22 bits away from this cluster)

Group of orthologs #1505. Best score 109 bits
Score difference with first non-orthologous sequence - A.capsulata:109 P.pallidum:109

C0NS10              	100.00%		D3B080              	100.00%
Bootstrap support for C0NS10 as seed ortholog is 100%.
Bootstrap support for D3B080 as seed ortholog is 100%.

Group of orthologs #1506. Best score 109 bits
Score difference with first non-orthologous sequence - A.capsulata:109 P.pallidum:43

C0NNR2              	100.00%		D3BHT1              	100.00%
Bootstrap support for C0NNR2 as seed ortholog is 100%.
Bootstrap support for D3BHT1 as seed ortholog is 96%.

Group of orthologs #1507. Best score 109 bits
Score difference with first non-orthologous sequence - A.capsulata:109 P.pallidum:109

C0NJL7              	100.00%		D3BR70              	100.00%
Bootstrap support for C0NJL7 as seed ortholog is 100%.
Bootstrap support for D3BR70 as seed ortholog is 100%.

Group of orthologs #1508. Best score 108 bits
Score difference with first non-orthologous sequence - A.capsulata:108 P.pallidum:108

C0NPA2              	100.00%		D3BDW5              	100.00%
C0NEX2              	100.00%		D3BCP6              	100.00%
                    	       		D3BCW5              	86.14%
                    	       		D3BDV5              	56.60%
                    	       		D3B0Z2              	44.42%
                    	       		D3BJJ7              	18.53%
                    	       		D3BNK4              	15.84%
                    	       		D3AZQ3              	14.85%
Bootstrap support for C0NPA2 as seed ortholog is 100%.
Bootstrap support for C0NEX2 as seed ortholog is 100%.
Bootstrap support for D3BDW5 as seed ortholog is 100%.
Bootstrap support for D3BCP6 as seed ortholog is 100%.

Group of orthologs #1509. Best score 108 bits
Score difference with first non-orthologous sequence - A.capsulata:13 P.pallidum:59

C0NNY4              	100.00%		D3AVQ8              	100.00%
C0NPH2              	13.61%		D3AVL3              	95.91%
Bootstrap support for C0NNY4 as seed ortholog is 40%.
Alternative seed ortholog is C0NT91 (13 bits away from this cluster)
Bootstrap support for D3AVQ8 as seed ortholog is 93%.

Group of orthologs #1510. Best score 108 bits
Score difference with first non-orthologous sequence - A.capsulata:52 P.pallidum:49

C0NPD7              	100.00%		D3BRS7              	100.00%
                    	       		D3BQ27              	28.60%
                    	       		D3B667              	19.07%
Bootstrap support for C0NPD7 as seed ortholog is 93%.
Bootstrap support for D3BRS7 as seed ortholog is 90%.

Group of orthologs #1511. Best score 108 bits
Score difference with first non-orthologous sequence - A.capsulata:108 P.pallidum:108

C0NIT2              	100.00%		D3BSZ3              	100.00%
                    	       		D3BFK9              	33.82%
Bootstrap support for C0NIT2 as seed ortholog is 100%.
Bootstrap support for D3BSZ3 as seed ortholog is 100%.

Group of orthologs #1512. Best score 108 bits
Score difference with first non-orthologous sequence - A.capsulata:108 P.pallidum:108

C0NMF1              	100.00%		D3BU74              	100.00%
C0NPH7              	5.42%		
Bootstrap support for C0NMF1 as seed ortholog is 100%.
Bootstrap support for D3BU74 as seed ortholog is 100%.

Group of orthologs #1513. Best score 108 bits
Score difference with first non-orthologous sequence - A.capsulata:108 P.pallidum:108

C0NKN6              	100.00%		D3AWE4              	100.00%
Bootstrap support for C0NKN6 as seed ortholog is 100%.
Bootstrap support for D3AWE4 as seed ortholog is 100%.

Group of orthologs #1514. Best score 108 bits
Score difference with first non-orthologous sequence - A.capsulata:108 P.pallidum:108

C0NM17              	100.00%		D3BC02              	100.00%
Bootstrap support for C0NM17 as seed ortholog is 100%.
Bootstrap support for D3BC02 as seed ortholog is 100%.

Group of orthologs #1515. Best score 108 bits
Score difference with first non-orthologous sequence - A.capsulata:108 P.pallidum:108

C0NW30              	100.00%		D3B5L5              	100.00%
Bootstrap support for C0NW30 as seed ortholog is 100%.
Bootstrap support for D3B5L5 as seed ortholog is 100%.

Group of orthologs #1516. Best score 108 bits
Score difference with first non-orthologous sequence - A.capsulata:108 P.pallidum:108

C0NT73              	100.00%		D3BFK4              	100.00%
Bootstrap support for C0NT73 as seed ortholog is 100%.
Bootstrap support for D3BFK4 as seed ortholog is 100%.

Group of orthologs #1517. Best score 108 bits
Score difference with first non-orthologous sequence - A.capsulata:108 P.pallidum:108

C0NKB4              	100.00%		D3BVL0              	100.00%
Bootstrap support for C0NKB4 as seed ortholog is 100%.
Bootstrap support for D3BVL0 as seed ortholog is 100%.

Group of orthologs #1518. Best score 108 bits
Score difference with first non-orthologous sequence - A.capsulata:108 P.pallidum:108

C0NXQ7              	100.00%		D3BP72              	100.00%
Bootstrap support for C0NXQ7 as seed ortholog is 100%.
Bootstrap support for D3BP72 as seed ortholog is 100%.

Group of orthologs #1519. Best score 108 bits
Score difference with first non-orthologous sequence - A.capsulata:108 P.pallidum:108

C0NRU6              	100.00%		D3BVK2              	100.00%
Bootstrap support for C0NRU6 as seed ortholog is 100%.
Bootstrap support for D3BVK2 as seed ortholog is 100%.

Group of orthologs #1520. Best score 107 bits
Score difference with first non-orthologous sequence - A.capsulata:107 P.pallidum:107

C0NHN0              	100.00%		D3BFK8              	100.00%
C0NL14              	6.87%		
C0NBN1              	5.79%		
C0P1C7              	5.30%		
Bootstrap support for C0NHN0 as seed ortholog is 100%.
Bootstrap support for D3BFK8 as seed ortholog is 100%.

Group of orthologs #1521. Best score 107 bits
Score difference with first non-orthologous sequence - A.capsulata:107 P.pallidum:107

C0NIE3              	100.00%		D3B6Z4              	100.00%
Bootstrap support for C0NIE3 as seed ortholog is 100%.
Bootstrap support for D3B6Z4 as seed ortholog is 100%.

Group of orthologs #1522. Best score 107 bits
Score difference with first non-orthologous sequence - A.capsulata:107 P.pallidum:107

C0NWC7              	100.00%		D3AYJ8              	100.00%
Bootstrap support for C0NWC7 as seed ortholog is 100%.
Bootstrap support for D3AYJ8 as seed ortholog is 100%.

Group of orthologs #1523. Best score 107 bits
Score difference with first non-orthologous sequence - A.capsulata:107 P.pallidum:107

C0NTG8              	100.00%		D3B3C2              	100.00%
Bootstrap support for C0NTG8 as seed ortholog is 100%.
Bootstrap support for D3B3C2 as seed ortholog is 100%.

Group of orthologs #1524. Best score 106 bits
Score difference with first non-orthologous sequence - A.capsulata:37 P.pallidum:106

C0NL21              	100.00%		D3B2A6              	100.00%
C0NUU3              	23.57%		
C0NFN1              	6.16%		
Bootstrap support for C0NL21 as seed ortholog is 94%.
Bootstrap support for D3B2A6 as seed ortholog is 100%.

Group of orthologs #1525. Best score 106 bits
Score difference with first non-orthologous sequence - A.capsulata:106 P.pallidum:106

C0NMY8              	100.00%		D3AZU6              	100.00%
Bootstrap support for C0NMY8 as seed ortholog is 100%.
Bootstrap support for D3AZU6 as seed ortholog is 100%.

Group of orthologs #1526. Best score 106 bits
Score difference with first non-orthologous sequence - A.capsulata:106 P.pallidum:106

C0NME0              	100.00%		D3B147              	100.00%
Bootstrap support for C0NME0 as seed ortholog is 100%.
Bootstrap support for D3B147 as seed ortholog is 100%.

Group of orthologs #1527. Best score 106 bits
Score difference with first non-orthologous sequence - A.capsulata:57 P.pallidum:52

C0NQP1              	100.00%		D3B554              	100.00%
Bootstrap support for C0NQP1 as seed ortholog is 95%.
Bootstrap support for D3B554 as seed ortholog is 94%.

Group of orthologs #1528. Best score 106 bits
Score difference with first non-orthologous sequence - A.capsulata:106 P.pallidum:106

C0NNB1              	100.00%		D3BER1              	100.00%
Bootstrap support for C0NNB1 as seed ortholog is 100%.
Bootstrap support for D3BER1 as seed ortholog is 100%.

Group of orthologs #1529. Best score 106 bits
Score difference with first non-orthologous sequence - A.capsulata:106 P.pallidum:106

C0NJT8              	100.00%		D3BIA2              	100.00%
Bootstrap support for C0NJT8 as seed ortholog is 100%.
Bootstrap support for D3BIA2 as seed ortholog is 100%.

Group of orthologs #1530. Best score 106 bits
Score difference with first non-orthologous sequence - A.capsulata:106 P.pallidum:106

C0NYY1              	100.00%		D3BL08              	100.00%
Bootstrap support for C0NYY1 as seed ortholog is 100%.
Bootstrap support for D3BL08 as seed ortholog is 100%.

Group of orthologs #1531. Best score 106 bits
Score difference with first non-orthologous sequence - A.capsulata:106 P.pallidum:106

C0P139              	100.00%		D3BPJ5              	100.00%
Bootstrap support for C0P139 as seed ortholog is 100%.
Bootstrap support for D3BPJ5 as seed ortholog is 100%.

Group of orthologs #1532. Best score 105 bits
Score difference with first non-orthologous sequence - A.capsulata:105 P.pallidum:10

C0NBC6              	100.00%		D3BE17              	100.00%
Bootstrap support for C0NBC6 as seed ortholog is 100%.
Bootstrap support for D3BE17 as seed ortholog is 71%.
Alternative seed ortholog is D3BRM7 (10 bits away from this cluster)

Group of orthologs #1533. Best score 105 bits
Score difference with first non-orthologous sequence - A.capsulata:105 P.pallidum:105

C0NTQ2              	100.00%		D3B401              	100.00%
Bootstrap support for C0NTQ2 as seed ortholog is 100%.
Bootstrap support for D3B401 as seed ortholog is 100%.

Group of orthologs #1534. Best score 105 bits
Score difference with first non-orthologous sequence - A.capsulata:105 P.pallidum:105

C0NZ95              	100.00%		D3B266              	100.00%
Bootstrap support for C0NZ95 as seed ortholog is 100%.
Bootstrap support for D3B266 as seed ortholog is 100%.

Group of orthologs #1535. Best score 105 bits
Score difference with first non-orthologous sequence - A.capsulata:105 P.pallidum:105

C0NHN5              	100.00%		D3BN29              	100.00%
Bootstrap support for C0NHN5 as seed ortholog is 100%.
Bootstrap support for D3BN29 as seed ortholog is 100%.

Group of orthologs #1536. Best score 105 bits
Score difference with first non-orthologous sequence - A.capsulata:105 P.pallidum:105

C0NCU2              	100.00%		D3BU33              	100.00%
Bootstrap support for C0NCU2 as seed ortholog is 100%.
Bootstrap support for D3BU33 as seed ortholog is 100%.

Group of orthologs #1537. Best score 105 bits
Score difference with first non-orthologous sequence - A.capsulata:105 P.pallidum:105

C0NQT8              	100.00%		D3BGW6              	100.00%
Bootstrap support for C0NQT8 as seed ortholog is 100%.
Bootstrap support for D3BGW6 as seed ortholog is 100%.

Group of orthologs #1538. Best score 105 bits
Score difference with first non-orthologous sequence - A.capsulata:105 P.pallidum:105

C0NZ58              	100.00%		D3BLV2              	100.00%
Bootstrap support for C0NZ58 as seed ortholog is 100%.
Bootstrap support for D3BLV2 as seed ortholog is 100%.

Group of orthologs #1539. Best score 104 bits
Score difference with first non-orthologous sequence - A.capsulata:104 P.pallidum:104

C0NC80              	100.00%		D3AXF9              	100.00%
Bootstrap support for C0NC80 as seed ortholog is 100%.
Bootstrap support for D3AXF9 as seed ortholog is 100%.

Group of orthologs #1540. Best score 104 bits
Score difference with first non-orthologous sequence - A.capsulata:104 P.pallidum:104

C0NIM4              	100.00%		D3B061              	100.00%
Bootstrap support for C0NIM4 as seed ortholog is 100%.
Bootstrap support for D3B061 as seed ortholog is 100%.

Group of orthologs #1541. Best score 104 bits
Score difference with first non-orthologous sequence - A.capsulata:104 P.pallidum:104

C0NNU2              	100.00%		D3AZM3              	100.00%
Bootstrap support for C0NNU2 as seed ortholog is 100%.
Bootstrap support for D3AZM3 as seed ortholog is 100%.

Group of orthologs #1542. Best score 104 bits
Score difference with first non-orthologous sequence - A.capsulata:104 P.pallidum:104

C0NFV5              	100.00%		D3BDR6              	100.00%
Bootstrap support for C0NFV5 as seed ortholog is 100%.
Bootstrap support for D3BDR6 as seed ortholog is 100%.

Group of orthologs #1543. Best score 104 bits
Score difference with first non-orthologous sequence - A.capsulata:104 P.pallidum:104

C0NJ90              	100.00%		D3BAU6              	100.00%
Bootstrap support for C0NJ90 as seed ortholog is 100%.
Bootstrap support for D3BAU6 as seed ortholog is 100%.

Group of orthologs #1544. Best score 104 bits
Score difference with first non-orthologous sequence - A.capsulata:104 P.pallidum:104

C0NBA0              	100.00%		D3BNC7              	100.00%
Bootstrap support for C0NBA0 as seed ortholog is 100%.
Bootstrap support for D3BNC7 as seed ortholog is 100%.

Group of orthologs #1545. Best score 104 bits
Score difference with first non-orthologous sequence - A.capsulata:104 P.pallidum:104

C0NJ66              	100.00%		D3BH56              	100.00%
Bootstrap support for C0NJ66 as seed ortholog is 100%.
Bootstrap support for D3BH56 as seed ortholog is 100%.

Group of orthologs #1546. Best score 104 bits
Score difference with first non-orthologous sequence - A.capsulata:104 P.pallidum:104

C0NKX5              	100.00%		D3BIS0              	100.00%
Bootstrap support for C0NKX5 as seed ortholog is 100%.
Bootstrap support for D3BIS0 as seed ortholog is 100%.

Group of orthologs #1547. Best score 104 bits
Score difference with first non-orthologous sequence - A.capsulata:104 P.pallidum:104

C0NCC4              	100.00%		D3BU56              	100.00%
Bootstrap support for C0NCC4 as seed ortholog is 100%.
Bootstrap support for D3BU56 as seed ortholog is 100%.

Group of orthologs #1548. Best score 103 bits
Score difference with first non-orthologous sequence - A.capsulata:103 P.pallidum:103

C0NN10              	100.00%		D3B4M9              	100.00%
                    	       		D3B4N1              	58.12%
Bootstrap support for C0NN10 as seed ortholog is 100%.
Bootstrap support for D3B4M9 as seed ortholog is 100%.

Group of orthologs #1549. Best score 103 bits
Score difference with first non-orthologous sequence - A.capsulata:16 P.pallidum:26

C0NEF1              	100.00%		D3BE12              	100.00%
Bootstrap support for C0NEF1 as seed ortholog is 66%.
Alternative seed ortholog is C0NZW3 (16 bits away from this cluster)
Bootstrap support for D3BE12 as seed ortholog is 80%.

Group of orthologs #1550. Best score 103 bits
Score difference with first non-orthologous sequence - A.capsulata:103 P.pallidum:103

C0NN76              	100.00%		D3B7U5              	100.00%
Bootstrap support for C0NN76 as seed ortholog is 100%.
Bootstrap support for D3B7U5 as seed ortholog is 100%.

Group of orthologs #1551. Best score 103 bits
Score difference with first non-orthologous sequence - A.capsulata:103 P.pallidum:103

C0NGS2              	100.00%		D3BEE9              	100.00%
Bootstrap support for C0NGS2 as seed ortholog is 100%.
Bootstrap support for D3BEE9 as seed ortholog is 100%.

Group of orthologs #1552. Best score 103 bits
Score difference with first non-orthologous sequence - A.capsulata:103 P.pallidum:103

C0NZF4              	100.00%		D3B3P7              	100.00%
Bootstrap support for C0NZF4 as seed ortholog is 100%.
Bootstrap support for D3B3P7 as seed ortholog is 100%.

Group of orthologs #1553. Best score 103 bits
Score difference with first non-orthologous sequence - A.capsulata:103 P.pallidum:103

C0NQN7              	100.00%		D3BJM4              	100.00%
Bootstrap support for C0NQN7 as seed ortholog is 100%.
Bootstrap support for D3BJM4 as seed ortholog is 100%.

Group of orthologs #1554. Best score 102 bits
Score difference with first non-orthologous sequence - A.capsulata:44 P.pallidum:35

C0NDH8              	100.00%		D3BR82              	100.00%
C0P1C0              	11.18%		D3BR81              	83.77%
C0ND39              	9.63%		D3BBW1              	56.47%
C0NIN8              	9.52%		D3BR59              	34.87%
                    	       		D3AZI7              	7.57%
Bootstrap support for C0NDH8 as seed ortholog is 88%.
Bootstrap support for D3BR82 as seed ortholog is 80%.

Group of orthologs #1555. Best score 102 bits
Score difference with first non-orthologous sequence - A.capsulata:18 P.pallidum:21

C0NET9              	100.00%		D3B4B8              	100.00%
C0NRQ0              	100.00%		
Bootstrap support for C0NET9 as seed ortholog is 68%.
Alternative seed ortholog is C0NSN2 (18 bits away from this cluster)
Bootstrap support for C0NRQ0 as seed ortholog is 67%.
Alternative seed ortholog is C0NSN2 (18 bits away from this cluster)
Bootstrap support for D3B4B8 as seed ortholog is 72%.
Alternative seed ortholog is D3BHM9 (21 bits away from this cluster)

Group of orthologs #1556. Best score 102 bits
Score difference with first non-orthologous sequence - A.capsulata:102 P.pallidum:102

C0NY34              	100.00%		D3BFR6              	100.00%
                    	       		D3BRT3              	17.25%
Bootstrap support for C0NY34 as seed ortholog is 100%.
Bootstrap support for D3BFR6 as seed ortholog is 100%.

Group of orthologs #1557. Best score 102 bits
Score difference with first non-orthologous sequence - A.capsulata:102 P.pallidum:102

C0NSG2              	100.00%		D3AZW6              	100.00%
Bootstrap support for C0NSG2 as seed ortholog is 100%.
Bootstrap support for D3AZW6 as seed ortholog is 100%.

Group of orthologs #1558. Best score 102 bits
Score difference with first non-orthologous sequence - A.capsulata:102 P.pallidum:102

C0NRE5              	100.00%		D3B4H4              	100.00%
Bootstrap support for C0NRE5 as seed ortholog is 100%.
Bootstrap support for D3B4H4 as seed ortholog is 100%.

Group of orthologs #1559. Best score 102 bits
Score difference with first non-orthologous sequence - A.capsulata:102 P.pallidum:102

C0NYG8              	100.00%		D3B2C3              	100.00%
Bootstrap support for C0NYG8 as seed ortholog is 100%.
Bootstrap support for D3B2C3 as seed ortholog is 100%.

Group of orthologs #1560. Best score 102 bits
Score difference with first non-orthologous sequence - A.capsulata:102 P.pallidum:102

C0NVA2              	100.00%		D3B733              	100.00%
Bootstrap support for C0NVA2 as seed ortholog is 100%.
Bootstrap support for D3B733 as seed ortholog is 100%.

Group of orthologs #1561. Best score 102 bits
Score difference with first non-orthologous sequence - A.capsulata:102 P.pallidum:102

C0NMQ5              	100.00%		D3BGB7              	100.00%
Bootstrap support for C0NMQ5 as seed ortholog is 100%.
Bootstrap support for D3BGB7 as seed ortholog is 100%.

Group of orthologs #1562. Best score 102 bits
Score difference with first non-orthologous sequence - A.capsulata:102 P.pallidum:102

C0NZX5              	100.00%		D3B496              	100.00%
Bootstrap support for C0NZX5 as seed ortholog is 100%.
Bootstrap support for D3B496 as seed ortholog is 100%.

Group of orthologs #1563. Best score 102 bits
Score difference with first non-orthologous sequence - A.capsulata:102 P.pallidum:102

C0NXV1              	100.00%		D3BR15              	100.00%
Bootstrap support for C0NXV1 as seed ortholog is 100%.
Bootstrap support for D3BR15 as seed ortholog is 100%.

Group of orthologs #1564. Best score 101 bits
Score difference with first non-orthologous sequence - A.capsulata:101 P.pallidum:101

C0NMG0              	100.00%		D3B247              	100.00%
Bootstrap support for C0NMG0 as seed ortholog is 100%.
Bootstrap support for D3B247 as seed ortholog is 100%.

Group of orthologs #1565. Best score 101 bits
Score difference with first non-orthologous sequence - A.capsulata:101 P.pallidum:101

C0NSD1              	100.00%		D3B778              	100.00%
Bootstrap support for C0NSD1 as seed ortholog is 100%.
Bootstrap support for D3B778 as seed ortholog is 100%.

Group of orthologs #1566. Best score 101 bits
Score difference with first non-orthologous sequence - A.capsulata:101 P.pallidum:101

C0NTB8              	100.00%		D3B7D4              	100.00%
Bootstrap support for C0NTB8 as seed ortholog is 100%.
Bootstrap support for D3B7D4 as seed ortholog is 100%.

Group of orthologs #1567. Best score 101 bits
Score difference with first non-orthologous sequence - A.capsulata:101 P.pallidum:101

C0ND36              	100.00%		D3BND9              	100.00%
Bootstrap support for C0ND36 as seed ortholog is 100%.
Bootstrap support for D3BND9 as seed ortholog is 100%.

Group of orthologs #1568. Best score 101 bits
Score difference with first non-orthologous sequence - A.capsulata:101 P.pallidum:101

C0NHK1              	100.00%		D3BKH4              	100.00%
Bootstrap support for C0NHK1 as seed ortholog is 100%.
Bootstrap support for D3BKH4 as seed ortholog is 100%.

Group of orthologs #1569. Best score 101 bits
Score difference with first non-orthologous sequence - A.capsulata:101 P.pallidum:101

C0NI88              	100.00%		D3BTE5              	100.00%
Bootstrap support for C0NI88 as seed ortholog is 100%.
Bootstrap support for D3BTE5 as seed ortholog is 100%.

Group of orthologs #1570. Best score 101 bits
Score difference with first non-orthologous sequence - A.capsulata:101 P.pallidum:57

C0NTL2              	100.00%		D3BSS7              	100.00%
Bootstrap support for C0NTL2 as seed ortholog is 100%.
Bootstrap support for D3BSS7 as seed ortholog is 94%.

Group of orthologs #1571. Best score 101 bits
Score difference with first non-orthologous sequence - A.capsulata:101 P.pallidum:101

C0NXP9              	100.00%		D3BSJ3              	100.00%
Bootstrap support for C0NXP9 as seed ortholog is 100%.
Bootstrap support for D3BSJ3 as seed ortholog is 100%.

Group of orthologs #1572. Best score 100 bits
Score difference with first non-orthologous sequence - A.capsulata:44 P.pallidum:100

C0NS08              	100.00%		D3BAK4              	100.00%
C0NNB8              	8.38%		
Bootstrap support for C0NS08 as seed ortholog is 89%.
Bootstrap support for D3BAK4 as seed ortholog is 100%.

Group of orthologs #1573. Best score 100 bits
Score difference with first non-orthologous sequence - A.capsulata:100 P.pallidum:100

C0NE01              	100.00%		D3B912              	100.00%
Bootstrap support for C0NE01 as seed ortholog is 100%.
Bootstrap support for D3B912 as seed ortholog is 100%.

Group of orthologs #1574. Best score 100 bits
Score difference with first non-orthologous sequence - A.capsulata:100 P.pallidum:100

C0NX25              	100.00%		D3AXV8              	100.00%
Bootstrap support for C0NX25 as seed ortholog is 100%.
Bootstrap support for D3AXV8 as seed ortholog is 100%.

Group of orthologs #1575. Best score 100 bits
Score difference with first non-orthologous sequence - A.capsulata:100 P.pallidum:100

C0NBB2              	100.00%		D3BKA2              	100.00%
Bootstrap support for C0NBB2 as seed ortholog is 100%.
Bootstrap support for D3BKA2 as seed ortholog is 100%.

Group of orthologs #1576. Best score 100 bits
Score difference with first non-orthologous sequence - A.capsulata:100 P.pallidum:100

C0NH92              	100.00%		D3BKE3              	100.00%
Bootstrap support for C0NH92 as seed ortholog is 100%.
Bootstrap support for D3BKE3 as seed ortholog is 100%.

Group of orthologs #1577. Best score 100 bits
Score difference with first non-orthologous sequence - A.capsulata:100 P.pallidum:100

C0NAQ6              	100.00%		D3BUT5              	100.00%
Bootstrap support for C0NAQ6 as seed ortholog is 100%.
Bootstrap support for D3BUT5 as seed ortholog is 100%.

Group of orthologs #1578. Best score 100 bits
Score difference with first non-orthologous sequence - A.capsulata:100 P.pallidum:18

C0NYU7              	100.00%		D3BAK7              	100.00%
Bootstrap support for C0NYU7 as seed ortholog is 100%.
Bootstrap support for D3BAK7 as seed ortholog is 66%.
Alternative seed ortholog is D3AXI6 (18 bits away from this cluster)

Group of orthologs #1579. Best score 100 bits
Score difference with first non-orthologous sequence - A.capsulata:100 P.pallidum:100

C0NYX9              	100.00%		D3BI19              	100.00%
Bootstrap support for C0NYX9 as seed ortholog is 100%.
Bootstrap support for D3BI19 as seed ortholog is 100%.

Group of orthologs #1580. Best score 100 bits
Score difference with first non-orthologous sequence - A.capsulata:100 P.pallidum:100

C0NW70              	100.00%		D3BV23              	100.00%
Bootstrap support for C0NW70 as seed ortholog is 100%.
Bootstrap support for D3BV23 as seed ortholog is 100%.

Group of orthologs #1581. Best score 99 bits
Score difference with first non-orthologous sequence - A.capsulata:99 P.pallidum:35

C0NN45              	100.00%		D3BH26              	100.00%
                    	       		D3BL05              	25.00%
Bootstrap support for C0NN45 as seed ortholog is 100%.
Bootstrap support for D3BH26 as seed ortholog is 81%.

Group of orthologs #1582. Best score 99 bits
Score difference with first non-orthologous sequence - A.capsulata:99 P.pallidum:99

C0NUR9              	100.00%		D3BQN4              	100.00%
                    	       		D3B6K0              	10.60%
Bootstrap support for C0NUR9 as seed ortholog is 100%.
Bootstrap support for D3BQN4 as seed ortholog is 100%.

Group of orthologs #1583. Best score 99 bits
Score difference with first non-orthologous sequence - A.capsulata:99 P.pallidum:99

C0NFH6              	100.00%		D3AXW4              	100.00%
Bootstrap support for C0NFH6 as seed ortholog is 100%.
Bootstrap support for D3AXW4 as seed ortholog is 100%.

Group of orthologs #1584. Best score 99 bits
Score difference with first non-orthologous sequence - A.capsulata:99 P.pallidum:99

C0NIR0              	100.00%		D3BCM4              	100.00%
Bootstrap support for C0NIR0 as seed ortholog is 100%.
Bootstrap support for D3BCM4 as seed ortholog is 100%.

Group of orthologs #1585. Best score 99 bits
Score difference with first non-orthologous sequence - A.capsulata:99 P.pallidum:99

C0NBD0              	100.00%		D3BK43              	100.00%
Bootstrap support for C0NBD0 as seed ortholog is 100%.
Bootstrap support for D3BK43 as seed ortholog is 100%.

Group of orthologs #1586. Best score 99 bits
Score difference with first non-orthologous sequence - A.capsulata:29 P.pallidum:99

C0NL85              	100.00%		D3BB97              	100.00%
Bootstrap support for C0NL85 as seed ortholog is 81%.
Bootstrap support for D3BB97 as seed ortholog is 100%.

Group of orthologs #1587. Best score 99 bits
Score difference with first non-orthologous sequence - A.capsulata:99 P.pallidum:99

C0NVE7              	100.00%		D3B416              	100.00%
Bootstrap support for C0NVE7 as seed ortholog is 100%.
Bootstrap support for D3B416 as seed ortholog is 100%.

Group of orthologs #1588. Best score 99 bits
Score difference with first non-orthologous sequence - A.capsulata:99 P.pallidum:99

C0NL51              	100.00%		D3BE01              	100.00%
Bootstrap support for C0NL51 as seed ortholog is 100%.
Bootstrap support for D3BE01 as seed ortholog is 100%.

Group of orthologs #1589. Best score 99 bits
Score difference with first non-orthologous sequence - A.capsulata:99 P.pallidum:99

C0NCV9              	100.00%		D3BP66              	100.00%
Bootstrap support for C0NCV9 as seed ortholog is 100%.
Bootstrap support for D3BP66 as seed ortholog is 100%.

Group of orthologs #1590. Best score 99 bits
Score difference with first non-orthologous sequence - A.capsulata:99 P.pallidum:99

C0NIS0              	100.00%		D3BNB6              	100.00%
Bootstrap support for C0NIS0 as seed ortholog is 100%.
Bootstrap support for D3BNB6 as seed ortholog is 100%.

Group of orthologs #1591. Best score 99 bits
Score difference with first non-orthologous sequence - A.capsulata:99 P.pallidum:42

C0NV01              	100.00%		D3BIW1              	100.00%
Bootstrap support for C0NV01 as seed ortholog is 100%.
Bootstrap support for D3BIW1 as seed ortholog is 84%.

Group of orthologs #1592. Best score 99 bits
Score difference with first non-orthologous sequence - A.capsulata:99 P.pallidum:99

C0NVQ0              	100.00%		D3BNV6              	100.00%
Bootstrap support for C0NVQ0 as seed ortholog is 100%.
Bootstrap support for D3BNV6 as seed ortholog is 100%.

Group of orthologs #1593. Best score 98 bits
Score difference with first non-orthologous sequence - A.capsulata:98 P.pallidum:98

C0NJ65              	100.00%		D3AXR3              	100.00%
Bootstrap support for C0NJ65 as seed ortholog is 100%.
Bootstrap support for D3AXR3 as seed ortholog is 100%.

Group of orthologs #1594. Best score 98 bits
Score difference with first non-orthologous sequence - A.capsulata:98 P.pallidum:98

C0NF07              	100.00%		D3BFN3              	100.00%
Bootstrap support for C0NF07 as seed ortholog is 100%.
Bootstrap support for D3BFN3 as seed ortholog is 100%.

Group of orthologs #1595. Best score 98 bits
Score difference with first non-orthologous sequence - A.capsulata:98 P.pallidum:98

C0ND70              	100.00%		D3BPE9              	100.00%
Bootstrap support for C0ND70 as seed ortholog is 100%.
Bootstrap support for D3BPE9 as seed ortholog is 100%.

Group of orthologs #1596. Best score 98 bits
Score difference with first non-orthologous sequence - A.capsulata:98 P.pallidum:98

C0NB87              	100.00%		D3BU12              	100.00%
Bootstrap support for C0NB87 as seed ortholog is 100%.
Bootstrap support for D3BU12 as seed ortholog is 100%.

Group of orthologs #1597. Best score 98 bits
Score difference with first non-orthologous sequence - A.capsulata:98 P.pallidum:98

C0NXE3              	100.00%		D3B8P8              	100.00%
Bootstrap support for C0NXE3 as seed ortholog is 100%.
Bootstrap support for D3B8P8 as seed ortholog is 100%.

Group of orthologs #1598. Best score 98 bits
Score difference with first non-orthologous sequence - A.capsulata:98 P.pallidum:98

C0NXR8              	100.00%		D3BDM3              	100.00%
Bootstrap support for C0NXR8 as seed ortholog is 100%.
Bootstrap support for D3BDM3 as seed ortholog is 100%.

Group of orthologs #1599. Best score 97 bits
Score difference with first non-orthologous sequence - A.capsulata:97 P.pallidum:31

C0NVK2              	100.00%		D3AY15              	100.00%
                    	       		D3B699              	16.52%
                    	       		D3B696              	12.17%
Bootstrap support for C0NVK2 as seed ortholog is 100%.
Bootstrap support for D3AY15 as seed ortholog is 88%.

Group of orthologs #1600. Best score 97 bits
Score difference with first non-orthologous sequence - A.capsulata:97 P.pallidum:97

C0NLV8              	100.00%		D3AWP1              	100.00%
Bootstrap support for C0NLV8 as seed ortholog is 100%.
Bootstrap support for D3AWP1 as seed ortholog is 100%.

Group of orthologs #1601. Best score 97 bits
Score difference with first non-orthologous sequence - A.capsulata:97 P.pallidum:97

C0NE98              	100.00%		D3B538              	100.00%
Bootstrap support for C0NE98 as seed ortholog is 100%.
Bootstrap support for D3B538 as seed ortholog is 100%.

Group of orthologs #1602. Best score 97 bits
Score difference with first non-orthologous sequence - A.capsulata:97 P.pallidum:97

C0NGI8              	100.00%		D3B9L7              	100.00%
Bootstrap support for C0NGI8 as seed ortholog is 100%.
Bootstrap support for D3B9L7 as seed ortholog is 100%.

Group of orthologs #1603. Best score 97 bits
Score difference with first non-orthologous sequence - A.capsulata:97 P.pallidum:97

C0NL75              	100.00%		D3B759              	100.00%
Bootstrap support for C0NL75 as seed ortholog is 100%.
Bootstrap support for D3B759 as seed ortholog is 100%.

Group of orthologs #1604. Best score 96 bits
Score difference with first non-orthologous sequence - A.capsulata:7 P.pallidum:6

C0NJS9              	100.00%		D3BGU6              	100.00%
                    	       		D3BKW4              	10.08%
                    	       		D3BLW3              	7.23%
Bootstrap support for C0NJS9 as seed ortholog is 57%.
Alternative seed ortholog is C0NN70 (7 bits away from this cluster)
Bootstrap support for D3BGU6 as seed ortholog is 53%.
Alternative seed ortholog is D3BAS0 (6 bits away from this cluster)

Group of orthologs #1605. Best score 96 bits
Score difference with first non-orthologous sequence - A.capsulata:50 P.pallidum:96

C0NK46              	100.00%		D3B5L6              	100.00%
Bootstrap support for C0NK46 as seed ortholog is 97%.
Bootstrap support for D3B5L6 as seed ortholog is 100%.

Group of orthologs #1606. Best score 96 bits
Score difference with first non-orthologous sequence - A.capsulata:96 P.pallidum:96

C0NGT9              	100.00%		D3B957              	100.00%
Bootstrap support for C0NGT9 as seed ortholog is 100%.
Bootstrap support for D3B957 as seed ortholog is 100%.

Group of orthologs #1607. Best score 96 bits
Score difference with first non-orthologous sequence - A.capsulata:96 P.pallidum:96

C0NPQ2              	100.00%		D3B6E4              	100.00%
Bootstrap support for C0NPQ2 as seed ortholog is 100%.
Bootstrap support for D3B6E4 as seed ortholog is 100%.

Group of orthologs #1608. Best score 96 bits
Score difference with first non-orthologous sequence - A.capsulata:96 P.pallidum:96

C0NQC2              	100.00%		D3BM19              	100.00%
Bootstrap support for C0NQC2 as seed ortholog is 100%.
Bootstrap support for D3BM19 as seed ortholog is 100%.

Group of orthologs #1609. Best score 96 bits
Score difference with first non-orthologous sequence - A.capsulata:96 P.pallidum:96

C0NU46              	100.00%		D3BUH5              	100.00%
Bootstrap support for C0NU46 as seed ortholog is 100%.
Bootstrap support for D3BUH5 as seed ortholog is 100%.

Group of orthologs #1610. Best score 95 bits
Score difference with first non-orthologous sequence - A.capsulata:95 P.pallidum:95

C0NMC8              	100.00%		D3B5B7              	100.00%
                    	       		D3BMK5              	11.75%
                    	       		D3AWL2              	6.65%
                    	       		D3B876              	5.07%
Bootstrap support for C0NMC8 as seed ortholog is 100%.
Bootstrap support for D3B5B7 as seed ortholog is 100%.

Group of orthologs #1611. Best score 95 bits
Score difference with first non-orthologous sequence - A.capsulata:95 P.pallidum:95

C0NMM5              	100.00%		D3AZB1              	100.00%
C0NIV5              	43.66%		
Bootstrap support for C0NMM5 as seed ortholog is 100%.
Bootstrap support for D3AZB1 as seed ortholog is 100%.

Group of orthologs #1612. Best score 95 bits
Score difference with first non-orthologous sequence - A.capsulata:95 P.pallidum:95

C0NPG1              	100.00%		D3B5E3              	100.00%
                    	       		D3BSB5              	45.74%
Bootstrap support for C0NPG1 as seed ortholog is 100%.
Bootstrap support for D3B5E3 as seed ortholog is 100%.

Group of orthologs #1613. Best score 95 bits
Score difference with first non-orthologous sequence - A.capsulata:95 P.pallidum:95

C0NKP7              	100.00%		D3BH33              	100.00%
Bootstrap support for C0NKP7 as seed ortholog is 100%.
Bootstrap support for D3BH33 as seed ortholog is 100%.

Group of orthologs #1614. Best score 95 bits
Score difference with first non-orthologous sequence - A.capsulata:95 P.pallidum:95

C0NKZ1              	100.00%		D3BHF9              	100.00%
Bootstrap support for C0NKZ1 as seed ortholog is 100%.
Bootstrap support for D3BHF9 as seed ortholog is 100%.

Group of orthologs #1615. Best score 95 bits
Score difference with first non-orthologous sequence - A.capsulata:9 P.pallidum:95

C0NF20              	100.00%		D3BU31              	100.00%
Bootstrap support for C0NF20 as seed ortholog is 98%.
Bootstrap support for D3BU31 as seed ortholog is 100%.

Group of orthologs #1616. Best score 94 bits
Score difference with first non-orthologous sequence - A.capsulata:94 P.pallidum:94

C0NHE0              	100.00%		D3AZB6              	100.00%
Bootstrap support for C0NHE0 as seed ortholog is 100%.
Bootstrap support for D3AZB6 as seed ortholog is 100%.

Group of orthologs #1617. Best score 94 bits
Score difference with first non-orthologous sequence - A.capsulata:94 P.pallidum:94

C0NRS6              	100.00%		D3AYE5              	100.00%
Bootstrap support for C0NRS6 as seed ortholog is 100%.
Bootstrap support for D3AYE5 as seed ortholog is 100%.

Group of orthologs #1618. Best score 94 bits
Score difference with first non-orthologous sequence - A.capsulata:94 P.pallidum:94

C0NFX7              	100.00%		D3BMH3              	100.00%
Bootstrap support for C0NFX7 as seed ortholog is 100%.
Bootstrap support for D3BMH3 as seed ortholog is 100%.

Group of orthologs #1619. Best score 94 bits
Score difference with first non-orthologous sequence - A.capsulata:94 P.pallidum:94

C0NPX0              	100.00%		D3BII5              	100.00%
Bootstrap support for C0NPX0 as seed ortholog is 100%.
Bootstrap support for D3BII5 as seed ortholog is 100%.

Group of orthologs #1620. Best score 94 bits
Score difference with first non-orthologous sequence - A.capsulata:94 P.pallidum:94

C0NUF1              	100.00%		D3BMK0              	100.00%
Bootstrap support for C0NUF1 as seed ortholog is 100%.
Bootstrap support for D3BMK0 as seed ortholog is 100%.

Group of orthologs #1621. Best score 94 bits
Score difference with first non-orthologous sequence - A.capsulata:94 P.pallidum:94

C0P0F5              	100.00%		D3BPQ3              	100.00%
Bootstrap support for C0P0F5 as seed ortholog is 100%.
Bootstrap support for D3BPQ3 as seed ortholog is 100%.

Group of orthologs #1622. Best score 93 bits
Score difference with first non-orthologous sequence - A.capsulata:93 P.pallidum:19

C0NPS0              	100.00%		D3B1S8              	100.00%
Bootstrap support for C0NPS0 as seed ortholog is 100%.
Bootstrap support for D3B1S8 as seed ortholog is 92%.

Group of orthologs #1623. Best score 93 bits
Score difference with first non-orthologous sequence - A.capsulata:93 P.pallidum:93

C0NCM2              	100.00%		D3BQ09              	100.00%
Bootstrap support for C0NCM2 as seed ortholog is 100%.
Bootstrap support for D3BQ09 as seed ortholog is 100%.

Group of orthologs #1624. Best score 93 bits
Score difference with first non-orthologous sequence - A.capsulata:31 P.pallidum:44

C0NRJ9              	100.00%		D3BUP0              	100.00%
Bootstrap support for C0NRJ9 as seed ortholog is 89%.
Bootstrap support for D3BUP0 as seed ortholog is 95%.

Group of orthologs #1625. Best score 93 bits
Score difference with first non-orthologous sequence - A.capsulata:93 P.pallidum:93

C0NT21              	100.00%		D3BUC3              	100.00%
Bootstrap support for C0NT21 as seed ortholog is 100%.
Bootstrap support for D3BUC3 as seed ortholog is 100%.

Group of orthologs #1626. Best score 92 bits
Score difference with first non-orthologous sequence - A.capsulata:92 P.pallidum:92

C0NDS2              	100.00%		D3BME2              	100.00%
C0NQ09              	100.00%		D3B2W1              	100.00%
Bootstrap support for C0NDS2 as seed ortholog is 100%.
Bootstrap support for C0NQ09 as seed ortholog is 100%.
Bootstrap support for D3BME2 as seed ortholog is 100%.
Bootstrap support for D3B2W1 as seed ortholog is 100%.

Group of orthologs #1627. Best score 92 bits
Score difference with first non-orthologous sequence - A.capsulata:92 P.pallidum:92

C0NMU0              	100.00%		D3BEQ7              	100.00%
                    	       		D3B149              	10.20%
Bootstrap support for C0NMU0 as seed ortholog is 100%.
Bootstrap support for D3BEQ7 as seed ortholog is 100%.

Group of orthologs #1628. Best score 92 bits
Score difference with first non-orthologous sequence - A.capsulata:92 P.pallidum:92

C0NDL8              	100.00%		D3BF10              	100.00%
Bootstrap support for C0NDL8 as seed ortholog is 100%.
Bootstrap support for D3BF10 as seed ortholog is 100%.

Group of orthologs #1629. Best score 92 bits
Score difference with first non-orthologous sequence - A.capsulata:92 P.pallidum:92

C0NGD9              	100.00%		D3BDB6              	100.00%
Bootstrap support for C0NGD9 as seed ortholog is 100%.
Bootstrap support for D3BDB6 as seed ortholog is 100%.

Group of orthologs #1630. Best score 92 bits
Score difference with first non-orthologous sequence - A.capsulata:1 P.pallidum:8

C0NKF1              	100.00%		D3BM15              	100.00%
Bootstrap support for C0NKF1 as seed ortholog is 48%.
Alternative seed ortholog is C0NTJ9 (1 bits away from this cluster)
Bootstrap support for D3BM15 as seed ortholog is 57%.
Alternative seed ortholog is D3AWD8 (8 bits away from this cluster)

Group of orthologs #1631. Best score 92 bits
Score difference with first non-orthologous sequence - A.capsulata:92 P.pallidum:92

C0NY66              	100.00%		D3BAA6              	100.00%
Bootstrap support for C0NY66 as seed ortholog is 100%.
Bootstrap support for D3BAA6 as seed ortholog is 100%.

Group of orthologs #1632. Best score 92 bits
Score difference with first non-orthologous sequence - A.capsulata:92 P.pallidum:92

C0NYV2              	100.00%		D3BNK2              	100.00%
Bootstrap support for C0NYV2 as seed ortholog is 100%.
Bootstrap support for D3BNK2 as seed ortholog is 100%.

Group of orthologs #1633. Best score 91 bits
Score difference with first non-orthologous sequence - A.capsulata:91 P.pallidum:91

C0NW84              	100.00%		D3BAI5              	100.00%
                    	       		D3B1I6              	12.76%
Bootstrap support for C0NW84 as seed ortholog is 100%.
Bootstrap support for D3BAI5 as seed ortholog is 100%.

Group of orthologs #1634. Best score 91 bits
Score difference with first non-orthologous sequence - A.capsulata:91 P.pallidum:91

C0NG25              	100.00%		D3AVX9              	100.00%
Bootstrap support for C0NG25 as seed ortholog is 100%.
Bootstrap support for D3AVX9 as seed ortholog is 100%.

Group of orthologs #1635. Best score 91 bits
Score difference with first non-orthologous sequence - A.capsulata:91 P.pallidum:91

C0NGG3              	100.00%		D3B031              	100.00%
Bootstrap support for C0NGG3 as seed ortholog is 100%.
Bootstrap support for D3B031 as seed ortholog is 100%.

Group of orthologs #1636. Best score 91 bits
Score difference with first non-orthologous sequence - A.capsulata:91 P.pallidum:91

C0NEU7              	100.00%		D3B9C3              	100.00%
Bootstrap support for C0NEU7 as seed ortholog is 100%.
Bootstrap support for D3B9C3 as seed ortholog is 100%.

Group of orthologs #1637. Best score 91 bits
Score difference with first non-orthologous sequence - A.capsulata:91 P.pallidum:91

C0NQL3              	100.00%		D3AZR0              	100.00%
Bootstrap support for C0NQL3 as seed ortholog is 100%.
Bootstrap support for D3AZR0 as seed ortholog is 100%.

Group of orthologs #1638. Best score 91 bits
Score difference with first non-orthologous sequence - A.capsulata:91 P.pallidum:91

C0NQF1              	100.00%		D3B2F4              	100.00%
Bootstrap support for C0NQF1 as seed ortholog is 100%.
Bootstrap support for D3B2F4 as seed ortholog is 100%.

Group of orthologs #1639. Best score 91 bits
Score difference with first non-orthologous sequence - A.capsulata:91 P.pallidum:91

C0NNM8              	100.00%		D3BHF0              	100.00%
Bootstrap support for C0NNM8 as seed ortholog is 100%.
Bootstrap support for D3BHF0 as seed ortholog is 100%.

Group of orthologs #1640. Best score 91 bits
Score difference with first non-orthologous sequence - A.capsulata:91 P.pallidum:91

C0NG74              	100.00%		D3BR37              	100.00%
Bootstrap support for C0NG74 as seed ortholog is 100%.
Bootstrap support for D3BR37 as seed ortholog is 100%.

Group of orthologs #1641. Best score 91 bits
Score difference with first non-orthologous sequence - A.capsulata:91 P.pallidum:91

C0NM38              	100.00%		D3BKZ5              	100.00%
Bootstrap support for C0NM38 as seed ortholog is 100%.
Bootstrap support for D3BKZ5 as seed ortholog is 100%.

Group of orthologs #1642. Best score 91 bits
Score difference with first non-orthologous sequence - A.capsulata:91 P.pallidum:91

C0P003              	100.00%		D3BFN4              	100.00%
Bootstrap support for C0P003 as seed ortholog is 100%.
Bootstrap support for D3BFN4 as seed ortholog is 100%.

Group of orthologs #1643. Best score 90 bits
Score difference with first non-orthologous sequence - A.capsulata:90 P.pallidum:90

C0NM23              	100.00%		D3B1I7              	100.00%
Bootstrap support for C0NM23 as seed ortholog is 100%.
Bootstrap support for D3B1I7 as seed ortholog is 100%.

Group of orthologs #1644. Best score 90 bits
Score difference with first non-orthologous sequence - A.capsulata:90 P.pallidum:90

C0NRS2              	100.00%		D3B8S5              	100.00%
Bootstrap support for C0NRS2 as seed ortholog is 100%.
Bootstrap support for D3B8S5 as seed ortholog is 100%.

Group of orthologs #1645. Best score 90 bits
Score difference with first non-orthologous sequence - A.capsulata:90 P.pallidum:90

C0NQH4              	100.00%		D3BU88              	100.00%
Bootstrap support for C0NQH4 as seed ortholog is 100%.
Bootstrap support for D3BU88 as seed ortholog is 100%.

Group of orthologs #1646. Best score 89 bits
Score difference with first non-orthologous sequence - A.capsulata:18 P.pallidum:89

C0NWS6              	100.00%		D3AWC2              	100.00%
C0NQH1              	41.69%		D3BED4              	24.01%
C0NHZ1              	28.64%		
C0NRD9              	26.48%		
C0NPM2              	23.76%		
C0NTX3              	22.72%		
C0NIH9              	14.46%		
C0NNM3              	5.07%		
Bootstrap support for C0NWS6 as seed ortholog is 71%.
Alternative seed ortholog is C0NLU0 (18 bits away from this cluster)
Bootstrap support for D3AWC2 as seed ortholog is 100%.

Group of orthologs #1647. Best score 89 bits
Score difference with first non-orthologous sequence - A.capsulata:17 P.pallidum:38

C0NES8              	100.00%		D3B4R9              	100.00%
C0NJU8              	36.92%		
C0NGF9              	12.75%		
Bootstrap support for C0NES8 as seed ortholog is 66%.
Alternative seed ortholog is C0NTF0 (17 bits away from this cluster)
Bootstrap support for D3B4R9 as seed ortholog is 86%.

Group of orthologs #1648. Best score 89 bits
Score difference with first non-orthologous sequence - A.capsulata:89 P.pallidum:89

C0NUT1              	100.00%		D3B6P9              	100.00%
C0NLG8              	5.44%		
Bootstrap support for C0NUT1 as seed ortholog is 100%.
Bootstrap support for D3B6P9 as seed ortholog is 100%.

Group of orthologs #1649. Best score 89 bits
Score difference with first non-orthologous sequence - A.capsulata:89 P.pallidum:89

C0NFD0              	100.00%		D3B1K7              	100.00%
Bootstrap support for C0NFD0 as seed ortholog is 100%.
Bootstrap support for D3B1K7 as seed ortholog is 100%.

Group of orthologs #1650. Best score 89 bits
Score difference with first non-orthologous sequence - A.capsulata:89 P.pallidum:89

C0NFE6              	100.00%		D3BEI5              	100.00%
Bootstrap support for C0NFE6 as seed ortholog is 100%.
Bootstrap support for D3BEI5 as seed ortholog is 100%.

Group of orthologs #1651. Best score 89 bits
Score difference with first non-orthologous sequence - A.capsulata:89 P.pallidum:89

C0NH21              	100.00%		D3BIP8              	100.00%
Bootstrap support for C0NH21 as seed ortholog is 100%.
Bootstrap support for D3BIP8 as seed ortholog is 100%.

Group of orthologs #1652. Best score 89 bits
Score difference with first non-orthologous sequence - A.capsulata:89 P.pallidum:89

C0NEQ7              	100.00%		D3BQT7              	100.00%
Bootstrap support for C0NEQ7 as seed ortholog is 100%.
Bootstrap support for D3BQT7 as seed ortholog is 100%.

Group of orthologs #1653. Best score 89 bits
Score difference with first non-orthologous sequence - A.capsulata:89 P.pallidum:89

C0NN48              	100.00%		D3BIR5              	100.00%
Bootstrap support for C0NN48 as seed ortholog is 100%.
Bootstrap support for D3BIR5 as seed ortholog is 100%.

Group of orthologs #1654. Best score 89 bits
Score difference with first non-orthologous sequence - A.capsulata:89 P.pallidum:89

C0NZC1              	100.00%		D3BCI3              	100.00%
Bootstrap support for C0NZC1 as seed ortholog is 100%.
Bootstrap support for D3BCI3 as seed ortholog is 100%.

Group of orthologs #1655. Best score 89 bits
Score difference with first non-orthologous sequence - A.capsulata:89 P.pallidum:89

C0NZU5              	100.00%		D3BVD3              	100.00%
Bootstrap support for C0NZU5 as seed ortholog is 100%.
Bootstrap support for D3BVD3 as seed ortholog is 100%.

Group of orthologs #1656. Best score 89 bits
Score difference with first non-orthologous sequence - A.capsulata:25 P.pallidum:89

C0NZW5              	100.00%		D3BVK7              	100.00%
Bootstrap support for C0NZW5 as seed ortholog is 90%.
Bootstrap support for D3BVK7 as seed ortholog is 100%.

Group of orthologs #1657. Best score 88 bits
Score difference with first non-orthologous sequence - A.capsulata:88 P.pallidum:88

C0NFJ3              	100.00%		D3AX77              	100.00%
Bootstrap support for C0NFJ3 as seed ortholog is 100%.
Bootstrap support for D3AX77 as seed ortholog is 100%.

Group of orthologs #1658. Best score 88 bits
Score difference with first non-orthologous sequence - A.capsulata:24 P.pallidum:88

C0NPI9              	100.00%		D3AY14              	100.00%
Bootstrap support for C0NPI9 as seed ortholog is 93%.
Bootstrap support for D3AY14 as seed ortholog is 100%.

Group of orthologs #1659. Best score 88 bits
Score difference with first non-orthologous sequence - A.capsulata:88 P.pallidum:88

C0NC87              	100.00%		D3BDF5              	100.00%
Bootstrap support for C0NC87 as seed ortholog is 100%.
Bootstrap support for D3BDF5 as seed ortholog is 100%.

Group of orthologs #1660. Best score 88 bits
Score difference with first non-orthologous sequence - A.capsulata:88 P.pallidum:88

C0NUZ2              	100.00%		D3B811              	100.00%
Bootstrap support for C0NUZ2 as seed ortholog is 100%.
Bootstrap support for D3B811 as seed ortholog is 100%.

Group of orthologs #1661. Best score 88 bits
Score difference with first non-orthologous sequence - A.capsulata:32 P.pallidum:43

C0NUH1              	100.00%		D3BA68              	100.00%
Bootstrap support for C0NUH1 as seed ortholog is 80%.
Bootstrap support for D3BA68 as seed ortholog is 86%.

Group of orthologs #1662. Best score 88 bits
Score difference with first non-orthologous sequence - A.capsulata:88 P.pallidum:88

C0NWA2              	100.00%		D3BFD8              	100.00%
Bootstrap support for C0NWA2 as seed ortholog is 100%.
Bootstrap support for D3BFD8 as seed ortholog is 100%.

Group of orthologs #1663. Best score 88 bits
Score difference with first non-orthologous sequence - A.capsulata:88 P.pallidum:88

C0NN78              	100.00%		D3BPI0              	100.00%
Bootstrap support for C0NN78 as seed ortholog is 100%.
Bootstrap support for D3BPI0 as seed ortholog is 100%.

Group of orthologs #1664. Best score 87 bits
Score difference with first non-orthologous sequence - A.capsulata:87 P.pallidum:87

C0NKP6              	100.00%		D3B4F8              	100.00%
Bootstrap support for C0NKP6 as seed ortholog is 100%.
Bootstrap support for D3B4F8 as seed ortholog is 100%.

Group of orthologs #1665. Best score 87 bits
Score difference with first non-orthologous sequence - A.capsulata:87 P.pallidum:87

C0P177              	100.00%		D3AVN0              	100.00%
Bootstrap support for C0P177 as seed ortholog is 100%.
Bootstrap support for D3AVN0 as seed ortholog is 100%.

Group of orthologs #1666. Best score 87 bits
Score difference with first non-orthologous sequence - A.capsulata:87 P.pallidum:24

C0NCP1              	100.00%		D3BR31              	100.00%
Bootstrap support for C0NCP1 as seed ortholog is 100%.
Bootstrap support for D3BR31 as seed ortholog is 81%.

Group of orthologs #1667. Best score 87 bits
Score difference with first non-orthologous sequence - A.capsulata:87 P.pallidum:87

C0NHH0              	100.00%		D3BLU5              	100.00%
Bootstrap support for C0NHH0 as seed ortholog is 100%.
Bootstrap support for D3BLU5 as seed ortholog is 100%.

Group of orthologs #1668. Best score 87 bits
Score difference with first non-orthologous sequence - A.capsulata:87 P.pallidum:87

C0NKP2              	100.00%		D3BJ38              	100.00%
Bootstrap support for C0NKP2 as seed ortholog is 100%.
Bootstrap support for D3BJ38 as seed ortholog is 100%.

Group of orthologs #1669. Best score 87 bits
Score difference with first non-orthologous sequence - A.capsulata:87 P.pallidum:87

C0NK06              	100.00%		D3BKQ3              	100.00%
Bootstrap support for C0NK06 as seed ortholog is 100%.
Bootstrap support for D3BKQ3 as seed ortholog is 100%.

Group of orthologs #1670. Best score 87 bits
Score difference with first non-orthologous sequence - A.capsulata:87 P.pallidum:87

C0NUV3              	100.00%		D3BBD7              	100.00%
Bootstrap support for C0NUV3 as seed ortholog is 100%.
Bootstrap support for D3BBD7 as seed ortholog is 100%.

Group of orthologs #1671. Best score 87 bits
Score difference with first non-orthologous sequence - A.capsulata:87 P.pallidum:87

C0NVY4              	100.00%		D3BB02              	100.00%
Bootstrap support for C0NVY4 as seed ortholog is 100%.
Bootstrap support for D3BB02 as seed ortholog is 100%.

Group of orthologs #1672. Best score 87 bits
Score difference with first non-orthologous sequence - A.capsulata:87 P.pallidum:87

C0NYF5              	100.00%		D3BAH7              	100.00%
Bootstrap support for C0NYF5 as seed ortholog is 100%.
Bootstrap support for D3BAH7 as seed ortholog is 100%.

Group of orthologs #1673. Best score 87 bits
Score difference with first non-orthologous sequence - A.capsulata:87 P.pallidum:87

C0NIR1              	100.00%		D3BS03              	100.00%
Bootstrap support for C0NIR1 as seed ortholog is 100%.
Bootstrap support for D3BS03 as seed ortholog is 100%.

Group of orthologs #1674. Best score 87 bits
Score difference with first non-orthologous sequence - A.capsulata:31 P.pallidum:87

C0NR69              	100.00%		D3BLA0              	100.00%
Bootstrap support for C0NR69 as seed ortholog is 83%.
Bootstrap support for D3BLA0 as seed ortholog is 100%.

Group of orthologs #1675. Best score 86 bits
Score difference with first non-orthologous sequence - A.capsulata:86 P.pallidum:86

C0NB09              	100.00%		D3BM32              	100.00%
C0NK72              	100.00%		
Bootstrap support for C0NB09 as seed ortholog is 100%.
Bootstrap support for C0NK72 as seed ortholog is 100%.
Bootstrap support for D3BM32 as seed ortholog is 100%.

Group of orthologs #1676. Best score 86 bits
Score difference with first non-orthologous sequence - A.capsulata:86 P.pallidum:86

C0NYN3              	100.00%		D3BSD2              	100.00%
                    	       		D3AYR5              	5.69%
Bootstrap support for C0NYN3 as seed ortholog is 100%.
Bootstrap support for D3BSD2 as seed ortholog is 100%.

Group of orthologs #1677. Best score 86 bits
Score difference with first non-orthologous sequence - A.capsulata:86 P.pallidum:86

C0NG47              	100.00%		D3AWW2              	100.00%
Bootstrap support for C0NG47 as seed ortholog is 100%.
Bootstrap support for D3AWW2 as seed ortholog is 100%.

Group of orthologs #1678. Best score 86 bits
Score difference with first non-orthologous sequence - A.capsulata:86 P.pallidum:86

C0NDA4              	100.00%		D3B4U0              	100.00%
Bootstrap support for C0NDA4 as seed ortholog is 100%.
Bootstrap support for D3B4U0 as seed ortholog is 100%.

Group of orthologs #1679. Best score 86 bits
Score difference with first non-orthologous sequence - A.capsulata:86 P.pallidum:86

C0NP04              	100.00%		D3B1F7              	100.00%
Bootstrap support for C0NP04 as seed ortholog is 100%.
Bootstrap support for D3B1F7 as seed ortholog is 100%.

Group of orthologs #1680. Best score 86 bits
Score difference with first non-orthologous sequence - A.capsulata:31 P.pallidum:30

C0NS13              	100.00%		D3B7X6              	100.00%
Bootstrap support for C0NS13 as seed ortholog is 94%.
Bootstrap support for D3B7X6 as seed ortholog is 92%.

Group of orthologs #1681. Best score 86 bits
Score difference with first non-orthologous sequence - A.capsulata:23 P.pallidum:31

C0NBP8              	100.00%		D3BPF6              	100.00%
Bootstrap support for C0NBP8 as seed ortholog is 74%.
Alternative seed ortholog is C0NKT7 (23 bits away from this cluster)
Bootstrap support for D3BPF6 as seed ortholog is 85%.

Group of orthologs #1682. Best score 86 bits
Score difference with first non-orthologous sequence - A.capsulata:86 P.pallidum:86

C0NNW6              	100.00%		D3BDY1              	100.00%
Bootstrap support for C0NNW6 as seed ortholog is 100%.
Bootstrap support for D3BDY1 as seed ortholog is 100%.

Group of orthologs #1683. Best score 86 bits
Score difference with first non-orthologous sequence - A.capsulata:86 P.pallidum:86

C0NN30              	100.00%		D3BPR8              	100.00%
Bootstrap support for C0NN30 as seed ortholog is 100%.
Bootstrap support for D3BPR8 as seed ortholog is 100%.

Group of orthologs #1684. Best score 86 bits
Score difference with first non-orthologous sequence - A.capsulata:86 P.pallidum:86

C0NZD4              	100.00%		D3BMF1              	100.00%
Bootstrap support for C0NZD4 as seed ortholog is 100%.
Bootstrap support for D3BMF1 as seed ortholog is 100%.

Group of orthologs #1685. Best score 85 bits
Score difference with first non-orthologous sequence - A.capsulata:85 P.pallidum:85

C0NSR2              	100.00%		D3AWZ9              	100.00%
Bootstrap support for C0NSR2 as seed ortholog is 100%.
Bootstrap support for D3AWZ9 as seed ortholog is 100%.

Group of orthologs #1686. Best score 85 bits
Score difference with first non-orthologous sequence - A.capsulata:85 P.pallidum:85

C0NY94              	100.00%		D3BE06              	100.00%
Bootstrap support for C0NY94 as seed ortholog is 100%.
Bootstrap support for D3BE06 as seed ortholog is 100%.

Group of orthologs #1687. Best score 85 bits
Score difference with first non-orthologous sequence - A.capsulata:85 P.pallidum:85

C0P182              	100.00%		D3BGG8              	100.00%
Bootstrap support for C0P182 as seed ortholog is 100%.
Bootstrap support for D3BGG8 as seed ortholog is 100%.

Group of orthologs #1688. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:28 P.pallidum:84

C0NVG5              	100.00%		D3BQI9              	100.00%
                    	       		D3BQI2              	82.29%
                    	       		D3B7M7              	25.44%
                    	       		D3AW53              	24.96%
                    	       		D3B8L2              	23.99%
                    	       		D3BTF2              	23.83%
                    	       		D3B082              	21.58%
                    	       		D3BBB9              	20.77%
                    	       		D3BBB7              	20.45%
                    	       		D3B3Z1              	19.97%
                    	       		D3BB33              	18.84%
                    	       		D3B9L2              	17.39%
                    	       		D3AZY9              	13.85%
                    	       		D3B078              	7.41%
Bootstrap support for C0NVG5 as seed ortholog is 75%.
Bootstrap support for D3BQI9 as seed ortholog is 100%.

Group of orthologs #1689. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:84 P.pallidum:84

C0NAD7              	100.00%		D3BCA2              	100.00%
Bootstrap support for C0NAD7 as seed ortholog is 100%.
Bootstrap support for D3BCA2 as seed ortholog is 100%.

Group of orthologs #1690. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:4 P.pallidum:84

C0NB94              	100.00%		D3BCY5              	100.00%
Bootstrap support for C0NB94 as seed ortholog is 43%.
Alternative seed ortholog is C0NCI5 (4 bits away from this cluster)
Bootstrap support for D3BCY5 as seed ortholog is 100%.

Group of orthologs #1691. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:84 P.pallidum:84

C0NM30              	100.00%		D3B6R3              	100.00%
Bootstrap support for C0NM30 as seed ortholog is 100%.
Bootstrap support for D3B6R3 as seed ortholog is 100%.

Group of orthologs #1692. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:84 P.pallidum:84

C0NKY6              	100.00%		D3BE21              	100.00%
Bootstrap support for C0NKY6 as seed ortholog is 100%.
Bootstrap support for D3BE21 as seed ortholog is 100%.

Group of orthologs #1693. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:84 P.pallidum:84

C0NKZ6              	100.00%		D3BHV8              	100.00%
Bootstrap support for C0NKZ6 as seed ortholog is 100%.
Bootstrap support for D3BHV8 as seed ortholog is 100%.

Group of orthologs #1694. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:84 P.pallidum:84

C0NNP9              	100.00%		D3BH66              	100.00%
Bootstrap support for C0NNP9 as seed ortholog is 100%.
Bootstrap support for D3BH66 as seed ortholog is 100%.

Group of orthologs #1695. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:38 P.pallidum:33

C0NH14              	100.00%		D3BUM7              	100.00%
Bootstrap support for C0NH14 as seed ortholog is 84%.
Bootstrap support for D3BUM7 as seed ortholog is 61%.
Alternative seed ortholog is D3BMB7 (33 bits away from this cluster)

Group of orthologs #1696. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:84 P.pallidum:84

C0P0L5              	100.00%		D3BKG6              	100.00%
Bootstrap support for C0P0L5 as seed ortholog is 100%.
Bootstrap support for D3BKG6 as seed ortholog is 100%.

Group of orthologs #1697. Best score 84 bits
Score difference with first non-orthologous sequence - A.capsulata:84 P.pallidum:84

C0NXE2              	100.00%		D3BT02              	100.00%
Bootstrap support for C0NXE2 as seed ortholog is 100%.
Bootstrap support for D3BT02 as seed ortholog is 100%.

Group of orthologs #1698. Best score 83 bits
Score difference with first non-orthologous sequence - A.capsulata:83 P.pallidum:83

C0NHA5              	100.00%		D3BL38              	100.00%
                    	       		D3BJU1              	6.91%
Bootstrap support for C0NHA5 as seed ortholog is 100%.
Bootstrap support for D3BL38 as seed ortholog is 100%.

Group of orthologs #1699. Best score 83 bits
Score difference with first non-orthologous sequence - A.capsulata:83 P.pallidum:83

C0NCH6              	100.00%		D3BE49              	100.00%
Bootstrap support for C0NCH6 as seed ortholog is 100%.
Bootstrap support for D3BE49 as seed ortholog is 100%.

Group of orthologs #1700. Best score 83 bits
Score difference with first non-orthologous sequence - A.capsulata:83 P.pallidum:83

C0NSQ6              	100.00%		D3B288              	100.00%
Bootstrap support for C0NSQ6 as seed ortholog is 100%.
Bootstrap support for D3B288 as seed ortholog is 100%.

Group of orthologs #1701. Best score 83 bits
Score difference with first non-orthologous sequence - A.capsulata:83 P.pallidum:83

C0NJQ0              	100.00%		D3BDH2              	100.00%
Bootstrap support for C0NJQ0 as seed ortholog is 100%.
Bootstrap support for D3BDH2 as seed ortholog is 100%.

Group of orthologs #1702. Best score 83 bits
Score difference with first non-orthologous sequence - A.capsulata:83 P.pallidum:83

C0NC50              	100.00%		D3BLP6              	100.00%
Bootstrap support for C0NC50 as seed ortholog is 100%.
Bootstrap support for D3BLP6 as seed ortholog is 100%.

Group of orthologs #1703. Best score 83 bits
Score difference with first non-orthologous sequence - A.capsulata:83 P.pallidum:83

C0NN60              	100.00%		D3BCR3              	100.00%
Bootstrap support for C0NN60 as seed ortholog is 100%.
Bootstrap support for D3BCR3 as seed ortholog is 100%.

Group of orthologs #1704. Best score 83 bits
Score difference with first non-orthologous sequence - A.capsulata:83 P.pallidum:83

C0NCQ0              	100.00%		D3BR47              	100.00%
Bootstrap support for C0NCQ0 as seed ortholog is 100%.
Bootstrap support for D3BR47 as seed ortholog is 100%.

Group of orthologs #1705. Best score 83 bits
Score difference with first non-orthologous sequence - A.capsulata:83 P.pallidum:83

C0P085              	100.00%		D3B3V2              	100.00%
Bootstrap support for C0P085 as seed ortholog is 100%.
Bootstrap support for D3B3V2 as seed ortholog is 100%.

Group of orthologs #1706. Best score 83 bits
Score difference with first non-orthologous sequence - A.capsulata:83 P.pallidum:83

C0NE62              	100.00%		D3BSQ1              	100.00%
Bootstrap support for C0NE62 as seed ortholog is 100%.
Bootstrap support for D3BSQ1 as seed ortholog is 100%.

Group of orthologs #1707. Best score 83 bits
Score difference with first non-orthologous sequence - A.capsulata:83 P.pallidum:83

C0NU53              	100.00%		D3BQ01              	100.00%
Bootstrap support for C0NU53 as seed ortholog is 100%.
Bootstrap support for D3BQ01 as seed ortholog is 100%.

Group of orthologs #1708. Best score 82 bits
Score difference with first non-orthologous sequence - A.capsulata:82 P.pallidum:31

C0NTD3              	100.00%		D3B816              	100.00%
                    	       		D3BJC9              	24.77%
                    	       		D3AYP0              	8.51%
Bootstrap support for C0NTD3 as seed ortholog is 100%.
Bootstrap support for D3B816 as seed ortholog is 67%.
Alternative seed ortholog is D3BIU0 (31 bits away from this cluster)

Group of orthologs #1709. Best score 82 bits
Score difference with first non-orthologous sequence - A.capsulata:82 P.pallidum:82

C0NRC9              	100.00%		D3AYL7              	100.00%
Bootstrap support for C0NRC9 as seed ortholog is 100%.
Bootstrap support for D3AYL7 as seed ortholog is 100%.

Group of orthologs #1710. Best score 82 bits
Score difference with first non-orthologous sequence - A.capsulata:82 P.pallidum:82

C0NRM6              	100.00%		D3B7X2              	100.00%
Bootstrap support for C0NRM6 as seed ortholog is 100%.
Bootstrap support for D3B7X2 as seed ortholog is 100%.

Group of orthologs #1711. Best score 82 bits
Score difference with first non-orthologous sequence - A.capsulata:82 P.pallidum:82

C0NT46              	100.00%		D3BLW1              	100.00%
Bootstrap support for C0NT46 as seed ortholog is 100%.
Bootstrap support for D3BLW1 as seed ortholog is 100%.

Group of orthologs #1712. Best score 81 bits
Score difference with first non-orthologous sequence - A.capsulata:81 P.pallidum:81

C0NZ44              	100.00%		D3AXH4              	100.00%
C0NZ07              	5.10%		D3AWH6              	65.33%
                    	       		D3AXH1              	63.94%
                    	       		D3AWY4              	35.71%
Bootstrap support for C0NZ44 as seed ortholog is 100%.
Bootstrap support for D3AXH4 as seed ortholog is 100%.

Group of orthologs #1713. Best score 81 bits
Score difference with first non-orthologous sequence - A.capsulata:81 P.pallidum:81

C0NAK5              	100.00%		D3BIL0              	100.00%
C0NT17              	11.89%		
C0NIQ6              	7.27%		
C0NKZ4              	7.10%		
Bootstrap support for C0NAK5 as seed ortholog is 100%.
Bootstrap support for D3BIL0 as seed ortholog is 100%.

Group of orthologs #1714. Best score 81 bits
Score difference with first non-orthologous sequence - A.capsulata:81 P.pallidum:81

C0NMS9              	100.00%		D3B7G4              	100.00%
                    	       		D3B7G7              	43.47%
Bootstrap support for C0NMS9 as seed ortholog is 100%.
Bootstrap support for D3B7G4 as seed ortholog is 100%.

Group of orthologs #1715. Best score 81 bits
Score difference with first non-orthologous sequence - A.capsulata:81 P.pallidum:81

C0NYX6              	100.00%		D3B5Q1              	100.00%
                    	       		D3B1G5              	6.25%
Bootstrap support for C0NYX6 as seed ortholog is 100%.
Bootstrap support for D3B5Q1 as seed ortholog is 100%.

Group of orthologs #1716. Best score 81 bits
Score difference with first non-orthologous sequence - A.capsulata:81 P.pallidum:81

C0NLL1              	100.00%		D3AY24              	100.00%
Bootstrap support for C0NLL1 as seed ortholog is 100%.
Bootstrap support for D3AY24 as seed ortholog is 100%.

Group of orthologs #1717. Best score 81 bits
Score difference with first non-orthologous sequence - A.capsulata:81 P.pallidum:81

C0NSL9              	100.00%		D3AXH0              	100.00%
Bootstrap support for C0NSL9 as seed ortholog is 100%.
Bootstrap support for D3AXH0 as seed ortholog is 100%.

Group of orthologs #1718. Best score 81 bits
Score difference with first non-orthologous sequence - A.capsulata:81 P.pallidum:81

C0P019              	100.00%		D3AWB7              	100.00%
Bootstrap support for C0P019 as seed ortholog is 100%.
Bootstrap support for D3AWB7 as seed ortholog is 100%.

Group of orthologs #1719. Best score 81 bits
Score difference with first non-orthologous sequence - A.capsulata:6 P.pallidum:81

C0NPR4              	100.00%		D3BGY8              	100.00%
Bootstrap support for C0NPR4 as seed ortholog is 63%.
Alternative seed ortholog is C0NLA7 (6 bits away from this cluster)
Bootstrap support for D3BGY8 as seed ortholog is 100%.

Group of orthologs #1720. Best score 80 bits
Score difference with first non-orthologous sequence - A.capsulata:80 P.pallidum:80

C0NDV9              	100.00%		D3AZC1              	100.00%
Bootstrap support for C0NDV9 as seed ortholog is 100%.
Bootstrap support for D3AZC1 as seed ortholog is 100%.

Group of orthologs #1721. Best score 80 bits
Score difference with first non-orthologous sequence - A.capsulata:80 P.pallidum:80

C0NLQ2              	100.00%		D3AY45              	100.00%
Bootstrap support for C0NLQ2 as seed ortholog is 100%.
Bootstrap support for D3AY45 as seed ortholog is 100%.

Group of orthologs #1722. Best score 80 bits
Score difference with first non-orthologous sequence - A.capsulata:80 P.pallidum:80

C0NCN7              	100.00%		D3BFV4              	100.00%
Bootstrap support for C0NCN7 as seed ortholog is 100%.
Bootstrap support for D3BFV4 as seed ortholog is 100%.

Group of orthologs #1723. Best score 80 bits
Score difference with first non-orthologous sequence - A.capsulata:80 P.pallidum:80

C0NB42              	100.00%		D3BLH5              	100.00%
Bootstrap support for C0NB42 as seed ortholog is 100%.
Bootstrap support for D3BLH5 as seed ortholog is 100%.

Group of orthologs #1724. Best score 80 bits
Score difference with first non-orthologous sequence - A.capsulata:80 P.pallidum:80

C0NXT3              	100.00%		D3B0X6              	100.00%
Bootstrap support for C0NXT3 as seed ortholog is 100%.
Bootstrap support for D3B0X6 as seed ortholog is 100%.

Group of orthologs #1725. Best score 80 bits
Score difference with first non-orthologous sequence - A.capsulata:80 P.pallidum:80

C0NS60              	100.00%		D3BFU3              	100.00%
Bootstrap support for C0NS60 as seed ortholog is 100%.
Bootstrap support for D3BFU3 as seed ortholog is 100%.

Group of orthologs #1726. Best score 80 bits
Score difference with first non-orthologous sequence - A.capsulata:80 P.pallidum:80

C0NZ15              	100.00%		D3BHV2              	100.00%
Bootstrap support for C0NZ15 as seed ortholog is 100%.
Bootstrap support for D3BHV2 as seed ortholog is 100%.

Group of orthologs #1727. Best score 80 bits
Score difference with first non-orthologous sequence - A.capsulata:80 P.pallidum:80

C0NW97              	100.00%		D3BMX3              	100.00%
Bootstrap support for C0NW97 as seed ortholog is 100%.
Bootstrap support for D3BMX3 as seed ortholog is 100%.

Group of orthologs #1728. Best score 80 bits
Score difference with first non-orthologous sequence - A.capsulata:80 P.pallidum:80

C0NZV4              	100.00%		D3BQY5              	100.00%
Bootstrap support for C0NZV4 as seed ortholog is 100%.
Bootstrap support for D3BQY5 as seed ortholog is 100%.

Group of orthologs #1729. Best score 79 bits
Score difference with first non-orthologous sequence - A.capsulata:79 P.pallidum:79

C0NPX4              	100.00%		D3BCC4              	100.00%
                    	       		D3BCC5              	5.53%
Bootstrap support for C0NPX4 as seed ortholog is 100%.
Bootstrap support for D3BCC4 as seed ortholog is 100%.

Group of orthologs #1730. Best score 79 bits
Score difference with first non-orthologous sequence - A.capsulata:79 P.pallidum:79

C0NZ40              	100.00%		D3BNJ4              	100.00%
                    	       		D3AW98              	38.22%
Bootstrap support for C0NZ40 as seed ortholog is 100%.
Bootstrap support for D3BNJ4 as seed ortholog is 100%.

Group of orthologs #1731. Best score 79 bits
Score difference with first non-orthologous sequence - A.capsulata:79 P.pallidum:79

C0NBZ1              	100.00%		D3B583              	100.00%
Bootstrap support for C0NBZ1 as seed ortholog is 100%.
Bootstrap support for D3B583 as seed ortholog is 100%.

Group of orthologs #1732. Best score 79 bits
Score difference with first non-orthologous sequence - A.capsulata:79 P.pallidum:79

C0NP17              	100.00%		D3AW26              	100.00%
Bootstrap support for C0NP17 as seed ortholog is 100%.
Bootstrap support for D3AW26 as seed ortholog is 100%.

Group of orthologs #1733. Best score 79 bits
Score difference with first non-orthologous sequence - A.capsulata:79 P.pallidum:79

C0NCV2              	100.00%		D3BDA6              	100.00%
Bootstrap support for C0NCV2 as seed ortholog is 100%.
Bootstrap support for D3BDA6 as seed ortholog is 100%.

Group of orthologs #1734. Best score 79 bits
Score difference with first non-orthologous sequence - A.capsulata:79 P.pallidum:79

C0NJI3              	100.00%		D3B7Y4              	100.00%
Bootstrap support for C0NJI3 as seed ortholog is 100%.
Bootstrap support for D3B7Y4 as seed ortholog is 100%.

Group of orthologs #1735. Best score 79 bits
Score difference with first non-orthologous sequence - A.capsulata:79 P.pallidum:79

C0NZI9              	100.00%		D3B052              	100.00%
Bootstrap support for C0NZI9 as seed ortholog is 100%.
Bootstrap support for D3B052 as seed ortholog is 100%.

Group of orthologs #1736. Best score 79 bits
Score difference with first non-orthologous sequence - A.capsulata:79 P.pallidum:79

C0NC30              	100.00%		D3BU60              	100.00%
Bootstrap support for C0NC30 as seed ortholog is 100%.
Bootstrap support for D3BU60 as seed ortholog is 100%.

Group of orthologs #1737. Best score 79 bits
Score difference with first non-orthologous sequence - A.capsulata:79 P.pallidum:79

C0NK93              	100.00%		D3BQ25              	100.00%
Bootstrap support for C0NK93 as seed ortholog is 100%.
Bootstrap support for D3BQ25 as seed ortholog is 100%.

Group of orthologs #1738. Best score 79 bits
Score difference with first non-orthologous sequence - A.capsulata:79 P.pallidum:79

C0NXM7              	100.00%		D3BD55              	100.00%
Bootstrap support for C0NXM7 as seed ortholog is 100%.
Bootstrap support for D3BD55 as seed ortholog is 100%.

Group of orthologs #1739. Best score 78 bits
Score difference with first non-orthologous sequence - A.capsulata:78 P.pallidum:78

C0NY04              	100.00%		D3BGS2              	100.00%
                    	       		D3BQZ9              	10.49%
Bootstrap support for C0NY04 as seed ortholog is 100%.
Bootstrap support for D3BGS2 as seed ortholog is 100%.

Group of orthologs #1740. Best score 78 bits
Score difference with first non-orthologous sequence - A.capsulata:78 P.pallidum:30

C0NB34              	100.00%		D3AXH2              	100.00%
Bootstrap support for C0NB34 as seed ortholog is 100%.
Bootstrap support for D3AXH2 as seed ortholog is 73%.
Alternative seed ortholog is D3B9X7 (30 bits away from this cluster)

Group of orthologs #1741. Best score 78 bits
Score difference with first non-orthologous sequence - A.capsulata:78 P.pallidum:78

C0NE19              	100.00%		D3AYJ3              	100.00%
Bootstrap support for C0NE19 as seed ortholog is 100%.
Bootstrap support for D3AYJ3 as seed ortholog is 100%.

Group of orthologs #1742. Best score 78 bits
Score difference with first non-orthologous sequence - A.capsulata:22 P.pallidum:12

C0NAL4              	100.00%		D3B3J9              	100.00%
Bootstrap support for C0NAL4 as seed ortholog is 71%.
Alternative seed ortholog is C0NS83 (22 bits away from this cluster)
Bootstrap support for D3B3J9 as seed ortholog is 65%.
Alternative seed ortholog is D3B3F2 (12 bits away from this cluster)

Group of orthologs #1743. Best score 78 bits
Score difference with first non-orthologous sequence - A.capsulata:78 P.pallidum:78

C0NC91              	100.00%		D3B6V4              	100.00%
Bootstrap support for C0NC91 as seed ortholog is 100%.
Bootstrap support for D3B6V4 as seed ortholog is 100%.

Group of orthologs #1744. Best score 78 bits
Score difference with first non-orthologous sequence - A.capsulata:78 P.pallidum:78

C0NEX5              	100.00%		D3BQ99              	100.00%
Bootstrap support for C0NEX5 as seed ortholog is 100%.
Bootstrap support for D3BQ99 as seed ortholog is 100%.

Group of orthologs #1745. Best score 78 bits
Score difference with first non-orthologous sequence - A.capsulata:78 P.pallidum:78

C0NM45              	100.00%		D3BNZ0              	100.00%
Bootstrap support for C0NM45 as seed ortholog is 100%.
Bootstrap support for D3BNZ0 as seed ortholog is 100%.

Group of orthologs #1746. Best score 78 bits
Score difference with first non-orthologous sequence - A.capsulata:78 P.pallidum:78

C0NMI0              	100.00%		D3BTD2              	100.00%
Bootstrap support for C0NMI0 as seed ortholog is 100%.
Bootstrap support for D3BTD2 as seed ortholog is 100%.

Group of orthologs #1747. Best score 78 bits
Score difference with first non-orthologous sequence - A.capsulata:78 P.pallidum:78

C0NLX1              	100.00%		D3BUW4              	100.00%
Bootstrap support for C0NLX1 as seed ortholog is 100%.
Bootstrap support for D3BUW4 as seed ortholog is 100%.

Group of orthologs #1748. Best score 77 bits
Score difference with first non-orthologous sequence - A.capsulata:77 P.pallidum:5

C0NSB2              	100.00%		D3BEK7              	100.00%
                    	       		D3BJA5              	11.26%
                    	       		D3AZN0              	8.15%
                    	       		D3B233              	6.31%
Bootstrap support for C0NSB2 as seed ortholog is 100%.
Bootstrap support for D3BEK7 as seed ortholog is 90%.

Group of orthologs #1749. Best score 77 bits
Score difference with first non-orthologous sequence - A.capsulata:77 P.pallidum:77

C0NY45              	100.00%		D3B155              	100.00%
                    	       		D3BJG7              	6.51%
Bootstrap support for C0NY45 as seed ortholog is 100%.
Bootstrap support for D3B155 as seed ortholog is 100%.

Group of orthologs #1750. Best score 77 bits
Score difference with first non-orthologous sequence - A.capsulata:77 P.pallidum:77

C0NMN4              	100.00%		D3AVN1              	100.00%
Bootstrap support for C0NMN4 as seed ortholog is 100%.
Bootstrap support for D3AVN1 as seed ortholog is 100%.

Group of orthologs #1751. Best score 77 bits
Score difference with first non-orthologous sequence - A.capsulata:77 P.pallidum:77

C0NW82              	100.00%		D3AX80              	100.00%
Bootstrap support for C0NW82 as seed ortholog is 100%.
Bootstrap support for D3AX80 as seed ortholog is 100%.

Group of orthologs #1752. Best score 77 bits
Score difference with first non-orthologous sequence - A.capsulata:77 P.pallidum:77

C0NKA5              	100.00%		D3BI32              	100.00%
Bootstrap support for C0NKA5 as seed ortholog is 100%.
Bootstrap support for D3BI32 as seed ortholog is 100%.

Group of orthologs #1753. Best score 77 bits
Score difference with first non-orthologous sequence - A.capsulata:77 P.pallidum:77

C0P1A8              	100.00%		D3B641              	100.00%
Bootstrap support for C0P1A8 as seed ortholog is 100%.
Bootstrap support for D3B641 as seed ortholog is 100%.

Group of orthologs #1754. Best score 77 bits
Score difference with first non-orthologous sequence - A.capsulata:77 P.pallidum:77

C0NUX3              	100.00%		D3BFT7              	100.00%
Bootstrap support for C0NUX3 as seed ortholog is 100%.
Bootstrap support for D3BFT7 as seed ortholog is 100%.

Group of orthologs #1755. Best score 77 bits
Score difference with first non-orthologous sequence - A.capsulata:77 P.pallidum:77

C0NMW1              	100.00%		D3BU32              	100.00%
Bootstrap support for C0NMW1 as seed ortholog is 100%.
Bootstrap support for D3BU32 as seed ortholog is 100%.

Group of orthologs #1756. Best score 77 bits
Score difference with first non-orthologous sequence - A.capsulata:77 P.pallidum:77

C0P167              	100.00%		D3BIS6              	100.00%
Bootstrap support for C0P167 as seed ortholog is 100%.
Bootstrap support for D3BIS6 as seed ortholog is 100%.

Group of orthologs #1757. Best score 76 bits
Score difference with first non-orthologous sequence - A.capsulata:76 P.pallidum:31

C0NFE2              	100.00%		D3B654              	100.00%
                    	       		D3BNG4              	12.52%
                    	       		D3BKP4              	11.42%
                    	       		D3B1J1              	5.71%
                    	       		D3B6L0              	5.52%
Bootstrap support for C0NFE2 as seed ortholog is 100%.
Bootstrap support for D3B654 as seed ortholog is 79%.

Group of orthologs #1758. Best score 76 bits
Score difference with first non-orthologous sequence - A.capsulata:76 P.pallidum:76

C0NI23              	100.00%		D3BR00              	100.00%
                    	       		D3BR01              	45.01%
Bootstrap support for C0NI23 as seed ortholog is 100%.
Bootstrap support for D3BR00 as seed ortholog is 100%.

Group of orthologs #1759. Best score 76 bits
Score difference with first non-orthologous sequence - A.capsulata:76 P.pallidum:76

C0NFJ5              	100.00%		D3AVT1              	100.00%
Bootstrap support for C0NFJ5 as seed ortholog is 100%.
Bootstrap support for D3AVT1 as seed ortholog is 100%.

Group of orthologs #1760. Best score 76 bits
Score difference with first non-orthologous sequence - A.capsulata:76 P.pallidum:76

C0NC03              	100.00%		D3B024              	100.00%
Bootstrap support for C0NC03 as seed ortholog is 100%.
Bootstrap support for D3B024 as seed ortholog is 100%.

Group of orthologs #1761. Best score 76 bits
Score difference with first non-orthologous sequence - A.capsulata:76 P.pallidum:76

C0NN85              	100.00%		D3B3B7              	100.00%
Bootstrap support for C0NN85 as seed ortholog is 100%.
Bootstrap support for D3B3B7 as seed ortholog is 100%.

Group of orthologs #1762. Best score 76 bits
Score difference with first non-orthologous sequence - A.capsulata:76 P.pallidum:76

C0NKH2              	100.00%		D3BEC4              	100.00%
Bootstrap support for C0NKH2 as seed ortholog is 100%.
Bootstrap support for D3BEC4 as seed ortholog is 100%.

Group of orthologs #1763. Best score 76 bits
Score difference with first non-orthologous sequence - A.capsulata:76 P.pallidum:76

C0NNR1              	100.00%		D3BGK9              	100.00%
Bootstrap support for C0NNR1 as seed ortholog is 100%.
Bootstrap support for D3BGK9 as seed ortholog is 100%.

Group of orthologs #1764. Best score 76 bits
Score difference with first non-orthologous sequence - A.capsulata:76 P.pallidum:76

C0NVH4              	100.00%		D3BHD2              	100.00%
Bootstrap support for C0NVH4 as seed ortholog is 100%.
Bootstrap support for D3BHD2 as seed ortholog is 100%.

Group of orthologs #1765. Best score 76 bits
Score difference with first non-orthologous sequence - A.capsulata:76 P.pallidum:76

C0NQU8              	100.00%		D3BV86              	100.00%
Bootstrap support for C0NQU8 as seed ortholog is 100%.
Bootstrap support for D3BV86 as seed ortholog is 100%.

Group of orthologs #1766. Best score 75 bits
Score difference with first non-orthologous sequence - A.capsulata:75 P.pallidum:75

C0NVR1              	100.00%		D3AVY1              	100.00%
C0NT42              	100.00%		D3BI61              	100.00%
                    	       		D3AXX3              	54.93%
                    	       		D3AVY0              	34.49%
Bootstrap support for C0NVR1 as seed ortholog is 100%.
Bootstrap support for C0NT42 as seed ortholog is 100%.
Bootstrap support for D3AVY1 as seed ortholog is 100%.
Bootstrap support for D3BI61 as seed ortholog is 100%.

Group of orthologs #1767. Best score 75 bits
Score difference with first non-orthologous sequence - A.capsulata:75 P.pallidum:75

C0NGG1              	100.00%		D3AVK7              	100.00%
Bootstrap support for C0NGG1 as seed ortholog is 100%.
Bootstrap support for D3AVK7 as seed ortholog is 100%.

Group of orthologs #1768. Best score 75 bits
Score difference with first non-orthologous sequence - A.capsulata:75 P.pallidum:75

C0NFZ3              	100.00%		D3AZD4              	100.00%
Bootstrap support for C0NFZ3 as seed ortholog is 100%.
Bootstrap support for D3AZD4 as seed ortholog is 100%.

Group of orthologs #1769. Best score 75 bits
Score difference with first non-orthologous sequence - A.capsulata:75 P.pallidum:75

C0NK96              	100.00%		D3BB60              	100.00%
Bootstrap support for C0NK96 as seed ortholog is 100%.
Bootstrap support for D3BB60 as seed ortholog is 100%.

Group of orthologs #1770. Best score 75 bits
Score difference with first non-orthologous sequence - A.capsulata:75 P.pallidum:75

C0NWW1              	100.00%		D3BB70              	100.00%
Bootstrap support for C0NWW1 as seed ortholog is 100%.
Bootstrap support for D3BB70 as seed ortholog is 100%.

Group of orthologs #1771. Best score 75 bits
Score difference with first non-orthologous sequence - A.capsulata:75 P.pallidum:75

C0NX09              	100.00%		D3BIF6              	100.00%
Bootstrap support for C0NX09 as seed ortholog is 100%.
Bootstrap support for D3BIF6 as seed ortholog is 100%.

Group of orthologs #1772. Best score 74 bits
Score difference with first non-orthologous sequence - A.capsulata:74 P.pallidum:74

C0NAG8              	100.00%		D3BAA3              	100.00%
C0NIR4              	100.00%		D3AVG4              	100.00%
                    	       		D3BBA6              	58.76%
Bootstrap support for C0NAG8 as seed ortholog is 100%.
Bootstrap support for C0NIR4 as seed ortholog is 100%.
Bootstrap support for D3BAA3 as seed ortholog is 100%.
Bootstrap support for D3AVG4 as seed ortholog is 100%.

Group of orthologs #1773. Best score 74 bits
Score difference with first non-orthologous sequence - A.capsulata:74 P.pallidum:74

C0NGL6              	100.00%		D3BVD6              	100.00%
                    	       		D3BVD5              	87.71%
Bootstrap support for C0NGL6 as seed ortholog is 100%.
Bootstrap support for D3BVD6 as seed ortholog is 100%.

Group of orthologs #1774. Best score 74 bits
Score difference with first non-orthologous sequence - A.capsulata:74 P.pallidum:74

C0NEF5              	100.00%		D3BHH3              	100.00%
Bootstrap support for C0NEF5 as seed ortholog is 100%.
Bootstrap support for D3BHH3 as seed ortholog is 100%.

Group of orthologs #1775. Best score 74 bits
Score difference with first non-orthologous sequence - A.capsulata:74 P.pallidum:74

C0NKX0              	100.00%		D3BEJ0              	100.00%
Bootstrap support for C0NKX0 as seed ortholog is 100%.
Bootstrap support for D3BEJ0 as seed ortholog is 100%.

Group of orthologs #1776. Best score 74 bits
Score difference with first non-orthologous sequence - A.capsulata:74 P.pallidum:74

C0NGV2              	100.00%		D3BQC9              	100.00%
Bootstrap support for C0NGV2 as seed ortholog is 100%.
Bootstrap support for D3BQC9 as seed ortholog is 100%.

Group of orthologs #1777. Best score 74 bits
Score difference with first non-orthologous sequence - A.capsulata:74 P.pallidum:74

C0NSB5              	100.00%		D3BG34              	100.00%
Bootstrap support for C0NSB5 as seed ortholog is 100%.
Bootstrap support for D3BG34 as seed ortholog is 100%.

Group of orthologs #1778. Best score 74 bits
Score difference with first non-orthologous sequence - A.capsulata:74 P.pallidum:74

C0NW52              	100.00%		D3BDK7              	100.00%
Bootstrap support for C0NW52 as seed ortholog is 100%.
Bootstrap support for D3BDK7 as seed ortholog is 100%.

Group of orthologs #1779. Best score 74 bits
Score difference with first non-orthologous sequence - A.capsulata:74 P.pallidum:74

C0NSF6              	100.00%		D3BKB3              	100.00%
Bootstrap support for C0NSF6 as seed ortholog is 100%.
Bootstrap support for D3BKB3 as seed ortholog is 100%.

Group of orthologs #1780. Best score 74 bits
Score difference with first non-orthologous sequence - A.capsulata:74 P.pallidum:12

C0NXB4              	100.00%		D3BJS6              	100.00%
Bootstrap support for C0NXB4 as seed ortholog is 100%.
Bootstrap support for D3BJS6 as seed ortholog is 46%.
Alternative seed ortholog is D3AWM8 (12 bits away from this cluster)

Group of orthologs #1781. Best score 74 bits
Score difference with first non-orthologous sequence - A.capsulata:74 P.pallidum:74

C0NUX4              	100.00%		D3BN23              	100.00%
Bootstrap support for C0NUX4 as seed ortholog is 100%.
Bootstrap support for D3BN23 as seed ortholog is 100%.

Group of orthologs #1782. Best score 73 bits
Score difference with first non-orthologous sequence - A.capsulata:73 P.pallidum:73

C0NEZ9              	100.00%		D3B6G0              	100.00%
Bootstrap support for C0NEZ9 as seed ortholog is 100%.
Bootstrap support for D3B6G0 as seed ortholog is 100%.

Group of orthologs #1783. Best score 73 bits
Score difference with first non-orthologous sequence - A.capsulata:73 P.pallidum:73

C0NJH6              	100.00%		D3BH38              	100.00%
Bootstrap support for C0NJH6 as seed ortholog is 100%.
Bootstrap support for D3BH38 as seed ortholog is 100%.

Group of orthologs #1784. Best score 73 bits
Score difference with first non-orthologous sequence - A.capsulata:73 P.pallidum:73

C0NGT2              	100.00%		D3BKH8              	100.00%
Bootstrap support for C0NGT2 as seed ortholog is 100%.
Bootstrap support for D3BKH8 as seed ortholog is 100%.

Group of orthologs #1785. Best score 73 bits
Score difference with first non-orthologous sequence - A.capsulata:73 P.pallidum:73

C0NTV4              	100.00%		D3BAU4              	100.00%
Bootstrap support for C0NTV4 as seed ortholog is 100%.
Bootstrap support for D3BAU4 as seed ortholog is 100%.

Group of orthologs #1786. Best score 73 bits
Score difference with first non-orthologous sequence - A.capsulata:73 P.pallidum:73

C0NUB9              	100.00%		D3BC41              	100.00%
Bootstrap support for C0NUB9 as seed ortholog is 100%.
Bootstrap support for D3BC41 as seed ortholog is 100%.

Group of orthologs #1787. Best score 72 bits
Score difference with first non-orthologous sequence - A.capsulata:72 P.pallidum:72

C0NJA2              	100.00%		D3B117              	100.00%
Bootstrap support for C0NJA2 as seed ortholog is 100%.
Bootstrap support for D3B117 as seed ortholog is 100%.

Group of orthologs #1788. Best score 72 bits
Score difference with first non-orthologous sequence - A.capsulata:30 P.pallidum:72

C0NXK0              	100.00%		D3AXI5              	100.00%
Bootstrap support for C0NXK0 as seed ortholog is 55%.
Alternative seed ortholog is C0NRC6 (30 bits away from this cluster)
Bootstrap support for D3AXI5 as seed ortholog is 100%.

Group of orthologs #1789. Best score 72 bits
Score difference with first non-orthologous sequence - A.capsulata:72 P.pallidum:72

C0NYE8              	100.00%		D3AYP4              	100.00%
Bootstrap support for C0NYE8 as seed ortholog is 100%.
Bootstrap support for D3AYP4 as seed ortholog is 100%.

Group of orthologs #1790. Best score 72 bits
Score difference with first non-orthologous sequence - A.capsulata:72 P.pallidum:18

C0NDC8              	100.00%		D3BTZ6              	100.00%
Bootstrap support for C0NDC8 as seed ortholog is 100%.
Bootstrap support for D3BTZ6 as seed ortholog is 75%.

Group of orthologs #1791. Best score 72 bits
Score difference with first non-orthologous sequence - A.capsulata:72 P.pallidum:72

C0NRT6              	100.00%		D3BG98              	100.00%
Bootstrap support for C0NRT6 as seed ortholog is 100%.
Bootstrap support for D3BG98 as seed ortholog is 100%.

Group of orthologs #1792. Best score 72 bits
Score difference with first non-orthologous sequence - A.capsulata:72 P.pallidum:72

C0NGM9              	100.00%		D3BVM1              	100.00%
Bootstrap support for C0NGM9 as seed ortholog is 100%.
Bootstrap support for D3BVM1 as seed ortholog is 100%.

Group of orthologs #1793. Best score 71 bits
Score difference with first non-orthologous sequence - A.capsulata:71 P.pallidum:71

C0NU62              	100.00%		D3B509              	100.00%
                    	       		D3BC73              	9.98%
Bootstrap support for C0NU62 as seed ortholog is 100%.
Bootstrap support for D3B509 as seed ortholog is 100%.

Group of orthologs #1794. Best score 71 bits
Score difference with first non-orthologous sequence - A.capsulata:71 P.pallidum:71

C0NH62              	100.00%		D3B6T9              	100.00%
Bootstrap support for C0NH62 as seed ortholog is 100%.
Bootstrap support for D3B6T9 as seed ortholog is 100%.

Group of orthologs #1795. Best score 71 bits
Score difference with first non-orthologous sequence - A.capsulata:71 P.pallidum:71

C0NV40              	100.00%		D3AVZ8              	100.00%
Bootstrap support for C0NV40 as seed ortholog is 100%.
Bootstrap support for D3AVZ8 as seed ortholog is 100%.

Group of orthologs #1796. Best score 71 bits
Score difference with first non-orthologous sequence - A.capsulata:71 P.pallidum:71

C0NHN4              	100.00%		D3BCT9              	100.00%
Bootstrap support for C0NHN4 as seed ortholog is 100%.
Bootstrap support for D3BCT9 as seed ortholog is 100%.

Group of orthologs #1797. Best score 71 bits
Score difference with first non-orthologous sequence - A.capsulata:71 P.pallidum:17

C0NN12              	100.00%		D3BE02              	100.00%
Bootstrap support for C0NN12 as seed ortholog is 100%.
Bootstrap support for D3BE02 as seed ortholog is 67%.
Alternative seed ortholog is D3BVE5 (17 bits away from this cluster)

Group of orthologs #1798. Best score 71 bits
Score difference with first non-orthologous sequence - A.capsulata:71 P.pallidum:71

Q5RLY7              	100.00%		D3B9I6              	100.00%
Bootstrap support for Q5RLY7 as seed ortholog is 100%.
Bootstrap support for D3B9I6 as seed ortholog is 100%.

Group of orthologs #1799. Best score 71 bits
Score difference with first non-orthologous sequence - A.capsulata:71 P.pallidum:71

C0NVE5              	100.00%		D3BFQ4              	100.00%
Bootstrap support for C0NVE5 as seed ortholog is 100%.
Bootstrap support for D3BFQ4 as seed ortholog is 100%.

Group of orthologs #1800. Best score 70 bits
Score difference with first non-orthologous sequence - A.capsulata:70 P.pallidum:70

C0NGN1              	100.00%		D3BKA1              	100.00%
Bootstrap support for C0NGN1 as seed ortholog is 100%.
Bootstrap support for D3BKA1 as seed ortholog is 100%.

Group of orthologs #1801. Best score 69 bits
Score difference with first non-orthologous sequence - A.capsulata:69 P.pallidum:69

C0NNF2              	100.00%		D3B330              	100.00%
                    	       		D3B326              	59.43%
                    	       		D3B327              	51.42%
                    	       		D3B325              	8.96%
                    	       		D3AXQ0              	8.02%
                    	       		D3AWG1              	6.13%
Bootstrap support for C0NNF2 as seed ortholog is 100%.
Bootstrap support for D3B330 as seed ortholog is 100%.

Group of orthologs #1802. Best score 69 bits
Score difference with first non-orthologous sequence - A.capsulata:69 P.pallidum:69

C0NPY2              	100.00%		D3AZ83              	100.00%
                    	       		D3B1Z6              	15.90%
Bootstrap support for C0NPY2 as seed ortholog is 100%.
Bootstrap support for D3AZ83 as seed ortholog is 100%.

Group of orthologs #1803. Best score 69 bits
Score difference with first non-orthologous sequence - A.capsulata:69 P.pallidum:69

C0NTU4              	100.00%		D3BBK5              	100.00%
C0NJ76              	35.53%		
Bootstrap support for C0NTU4 as seed ortholog is 100%.
Bootstrap support for D3BBK5 as seed ortholog is 100%.

Group of orthologs #1804. Best score 69 bits
Score difference with first non-orthologous sequence - A.capsulata:69 P.pallidum:69

C0NAI1              	100.00%		D3B4V8              	100.00%
Bootstrap support for C0NAI1 as seed ortholog is 100%.
Bootstrap support for D3B4V8 as seed ortholog is 100%.

Group of orthologs #1805. Best score 69 bits
Score difference with first non-orthologous sequence - A.capsulata:69 P.pallidum:69

C0NN15              	100.00%		D3BAT8              	100.00%
Bootstrap support for C0NN15 as seed ortholog is 100%.
Bootstrap support for D3BAT8 as seed ortholog is 100%.

Group of orthologs #1806. Best score 69 bits
Score difference with first non-orthologous sequence - A.capsulata:69 P.pallidum:69

C0NXQ5              	100.00%		D3B5P9              	100.00%
Bootstrap support for C0NXQ5 as seed ortholog is 100%.
Bootstrap support for D3B5P9 as seed ortholog is 100%.

Group of orthologs #1807. Best score 69 bits
Score difference with first non-orthologous sequence - A.capsulata:69 P.pallidum:69

C0NF00              	100.00%		D3BNQ3              	100.00%
Bootstrap support for C0NF00 as seed ortholog is 100%.
Bootstrap support for D3BNQ3 as seed ortholog is 100%.

Group of orthologs #1808. Best score 68 bits
Score difference with first non-orthologous sequence - A.capsulata:68 P.pallidum:68

C0NFN3              	100.00%		D3B8S3              	100.00%
Bootstrap support for C0NFN3 as seed ortholog is 100%.
Bootstrap support for D3B8S3 as seed ortholog is 100%.

Group of orthologs #1809. Best score 68 bits
Score difference with first non-orthologous sequence - A.capsulata:68 P.pallidum:68

C0NBQ8              	100.00%		D3BKI7              	100.00%
Bootstrap support for C0NBQ8 as seed ortholog is 100%.
Bootstrap support for D3BKI7 as seed ortholog is 100%.

Group of orthologs #1810. Best score 68 bits
Score difference with first non-orthologous sequence - A.capsulata:68 P.pallidum:68

C0NAU2              	100.00%		D3BMC5              	100.00%
Bootstrap support for C0NAU2 as seed ortholog is 100%.
Bootstrap support for D3BMC5 as seed ortholog is 100%.

Group of orthologs #1811. Best score 68 bits
Score difference with first non-orthologous sequence - A.capsulata:68 P.pallidum:18

C0NNX5              	100.00%		D3BAT7              	100.00%
Bootstrap support for C0NNX5 as seed ortholog is 100%.
Bootstrap support for D3BAT7 as seed ortholog is 86%.

Group of orthologs #1812. Best score 68 bits
Score difference with first non-orthologous sequence - A.capsulata:68 P.pallidum:68

C0NQT2              	100.00%		D3BE55              	100.00%
Bootstrap support for C0NQT2 as seed ortholog is 100%.
Bootstrap support for D3BE55 as seed ortholog is 100%.

Group of orthologs #1813. Best score 68 bits
Score difference with first non-orthologous sequence - A.capsulata:68 P.pallidum:68

C0NFK0              	100.00%		D3BUX5              	100.00%
Bootstrap support for C0NFK0 as seed ortholog is 100%.
Bootstrap support for D3BUX5 as seed ortholog is 100%.

Group of orthologs #1814. Best score 68 bits
Score difference with first non-orthologous sequence - A.capsulata:68 P.pallidum:68

C0NKM1              	100.00%		D3BTS2              	100.00%
Bootstrap support for C0NKM1 as seed ortholog is 100%.
Bootstrap support for D3BTS2 as seed ortholog is 100%.

Group of orthologs #1815. Best score 67 bits
Score difference with first non-orthologous sequence - A.capsulata:67 P.pallidum:67

C0NIB3              	100.00%		D3AWB6              	100.00%
Bootstrap support for C0NIB3 as seed ortholog is 100%.
Bootstrap support for D3AWB6 as seed ortholog is 100%.

Group of orthologs #1816. Best score 67 bits
Score difference with first non-orthologous sequence - A.capsulata:5 P.pallidum:67

C0NQI7              	100.00%		D3BAS9              	100.00%
Bootstrap support for C0NQI7 as seed ortholog is 53%.
Alternative seed ortholog is C0NDA8 (5 bits away from this cluster)
Bootstrap support for D3BAS9 as seed ortholog is 100%.

Group of orthologs #1817. Best score 67 bits
Score difference with first non-orthologous sequence - A.capsulata:67 P.pallidum:67

C0NRZ1              	100.00%		D3BF56              	100.00%
Bootstrap support for C0NRZ1 as seed ortholog is 100%.
Bootstrap support for D3BF56 as seed ortholog is 100%.

Group of orthologs #1818. Best score 67 bits
Score difference with first non-orthologous sequence - A.capsulata:67 P.pallidum:67

C0NR55              	100.00%		D3BGB3              	100.00%
Bootstrap support for C0NR55 as seed ortholog is 100%.
Bootstrap support for D3BGB3 as seed ortholog is 100%.

Group of orthologs #1819. Best score 67 bits
Score difference with first non-orthologous sequence - A.capsulata:67 P.pallidum:67

C0NVI0              	100.00%		D3BGD7              	100.00%
Bootstrap support for C0NVI0 as seed ortholog is 100%.
Bootstrap support for D3BGD7 as seed ortholog is 100%.

Group of orthologs #1820. Best score 67 bits
Score difference with first non-orthologous sequence - A.capsulata:67 P.pallidum:67

C0NZ17              	100.00%		D3BHA9              	100.00%
Bootstrap support for C0NZ17 as seed ortholog is 100%.
Bootstrap support for D3BHA9 as seed ortholog is 100%.

Group of orthologs #1821. Best score 66 bits
Score difference with first non-orthologous sequence - A.capsulata:66 P.pallidum:14

C0NDP9              	100.00%		D3B807              	100.00%
Bootstrap support for C0NDP9 as seed ortholog is 100%.
Bootstrap support for D3B807 as seed ortholog is 40%.
Alternative seed ortholog is D3BK30 (14 bits away from this cluster)

Group of orthologs #1822. Best score 66 bits
Score difference with first non-orthologous sequence - A.capsulata:66 P.pallidum:66

C0NFC5              	100.00%		D3BEI4              	100.00%
Bootstrap support for C0NFC5 as seed ortholog is 100%.
Bootstrap support for D3BEI4 as seed ortholog is 100%.

Group of orthologs #1823. Best score 66 bits
Score difference with first non-orthologous sequence - A.capsulata:66 P.pallidum:66

C0NTP7              	100.00%		D3B503              	100.00%
Bootstrap support for C0NTP7 as seed ortholog is 100%.
Bootstrap support for D3B503 as seed ortholog is 100%.

Group of orthologs #1824. Best score 66 bits
Score difference with first non-orthologous sequence - A.capsulata:66 P.pallidum:66

C0NMG4              	100.00%		D3BCL9              	100.00%
Bootstrap support for C0NMG4 as seed ortholog is 100%.
Bootstrap support for D3BCL9 as seed ortholog is 100%.

Group of orthologs #1825. Best score 66 bits
Score difference with first non-orthologous sequence - A.capsulata:66 P.pallidum:15

C0NV33              	100.00%		D3B9S9              	100.00%
Bootstrap support for C0NV33 as seed ortholog is 100%.
Bootstrap support for D3B9S9 as seed ortholog is 40%.
Alternative seed ortholog is D3B8Y5 (15 bits away from this cluster)

Group of orthologs #1826. Best score 66 bits
Score difference with first non-orthologous sequence - A.capsulata:66 P.pallidum:66

C0NTQ4              	100.00%		D3BJ22              	100.00%
Bootstrap support for C0NTQ4 as seed ortholog is 100%.
Bootstrap support for D3BJ22 as seed ortholog is 100%.

Group of orthologs #1827. Best score 65 bits
Score difference with first non-orthologous sequence - A.capsulata:65 P.pallidum:65

C0NHB8              	100.00%		D3B549              	100.00%
                    	       		D3BGM2              	37.28%
Bootstrap support for C0NHB8 as seed ortholog is 100%.
Bootstrap support for D3B549 as seed ortholog is 100%.

Group of orthologs #1828. Best score 65 bits
Score difference with first non-orthologous sequence - A.capsulata:65 P.pallidum:65

C0NAT8              	100.00%		D3B2R5              	100.00%
Bootstrap support for C0NAT8 as seed ortholog is 100%.
Bootstrap support for D3B2R5 as seed ortholog is 100%.

Group of orthologs #1829. Best score 65 bits
Score difference with first non-orthologous sequence - A.capsulata:65 P.pallidum:65

C0NN95              	100.00%		D3AXA2              	100.00%
Bootstrap support for C0NN95 as seed ortholog is 100%.
Bootstrap support for D3AXA2 as seed ortholog is 100%.

Group of orthologs #1830. Best score 65 bits
Score difference with first non-orthologous sequence - A.capsulata:65 P.pallidum:65

C0NL32              	100.00%		D3B1B7              	100.00%
Bootstrap support for C0NL32 as seed ortholog is 100%.
Bootstrap support for D3B1B7 as seed ortholog is 100%.

Group of orthologs #1831. Best score 65 bits
Score difference with first non-orthologous sequence - A.capsulata:65 P.pallidum:65

C0NNV5              	100.00%		D3B9J2              	100.00%
Bootstrap support for C0NNV5 as seed ortholog is 100%.
Bootstrap support for D3B9J2 as seed ortholog is 100%.

Group of orthologs #1832. Best score 64 bits
Score difference with first non-orthologous sequence - A.capsulata:12 P.pallidum:64

C0NG04              	100.00%		D3BHJ7              	100.00%
C0NNG9              	7.89%		
Bootstrap support for C0NG04 as seed ortholog is 62%.
Alternative seed ortholog is C0NGD8 (12 bits away from this cluster)
Bootstrap support for D3BHJ7 as seed ortholog is 100%.

Group of orthologs #1833. Best score 64 bits
Score difference with first non-orthologous sequence - A.capsulata:64 P.pallidum:64

C0NIN1              	100.00%		D3AZP3              	100.00%
Bootstrap support for C0NIN1 as seed ortholog is 100%.
Bootstrap support for D3AZP3 as seed ortholog is 100%.

Group of orthologs #1834. Best score 64 bits
Score difference with first non-orthologous sequence - A.capsulata:64 P.pallidum:64

C0NXB7              	100.00%		D3BJB2              	100.00%
Bootstrap support for C0NXB7 as seed ortholog is 100%.
Bootstrap support for D3BJB2 as seed ortholog is 100%.

Group of orthologs #1835. Best score 64 bits
Score difference with first non-orthologous sequence - A.capsulata:64 P.pallidum:64

C0NZ64              	100.00%		D3BJ79              	100.00%
Bootstrap support for C0NZ64 as seed ortholog is 100%.
Bootstrap support for D3BJ79 as seed ortholog is 100%.

Group of orthologs #1836. Best score 64 bits
Score difference with first non-orthologous sequence - A.capsulata:64 P.pallidum:20

C0P0J1              	100.00%		D3BQH4              	100.00%
Bootstrap support for C0P0J1 as seed ortholog is 100%.
Bootstrap support for D3BQH4 as seed ortholog is 77%.

Group of orthologs #1837. Best score 63 bits
Score difference with first non-orthologous sequence - A.capsulata:63 P.pallidum:63

C0NXH2              	100.00%		D3BFK0              	100.00%
                    	       		D3B4R6              	21.93%
Bootstrap support for C0NXH2 as seed ortholog is 100%.
Bootstrap support for D3BFK0 as seed ortholog is 100%.

Group of orthologs #1838. Best score 63 bits
Score difference with first non-orthologous sequence - A.capsulata:63 P.pallidum:63

C0NJP1              	100.00%		D3B2Y5              	100.00%
Bootstrap support for C0NJP1 as seed ortholog is 100%.
Bootstrap support for D3B2Y5 as seed ortholog is 100%.

Group of orthologs #1839. Best score 63 bits
Score difference with first non-orthologous sequence - A.capsulata:63 P.pallidum:63

C0NP55              	100.00%		D3B0M7              	100.00%
Bootstrap support for C0NP55 as seed ortholog is 100%.
Bootstrap support for D3B0M7 as seed ortholog is 100%.

Group of orthologs #1840. Best score 63 bits
Score difference with first non-orthologous sequence - A.capsulata:63 P.pallidum:63

C0NAB7              	100.00%		D3BH64              	100.00%
Bootstrap support for C0NAB7 as seed ortholog is 100%.
Bootstrap support for D3BH64 as seed ortholog is 100%.

Group of orthologs #1841. Best score 63 bits
Score difference with first non-orthologous sequence - A.capsulata:63 P.pallidum:63

C0NWR4              	100.00%		D3B7A4              	100.00%
Bootstrap support for C0NWR4 as seed ortholog is 100%.
Bootstrap support for D3B7A4 as seed ortholog is 100%.

Group of orthologs #1842. Best score 63 bits
Score difference with first non-orthologous sequence - A.capsulata:63 P.pallidum:63

C0NP05              	100.00%		D3BTL0              	100.00%
Bootstrap support for C0NP05 as seed ortholog is 100%.
Bootstrap support for D3BTL0 as seed ortholog is 100%.

Group of orthologs #1843. Best score 62 bits
Score difference with first non-orthologous sequence - A.capsulata:62 P.pallidum:62

C0NV54              	100.00%		D3BDZ6              	100.00%
                    	       		D3BEL8              	15.70%
                    	       		D3BNT6              	11.70%
                    	       		D3BIS5              	6.37%
Bootstrap support for C0NV54 as seed ortholog is 100%.
Bootstrap support for D3BDZ6 as seed ortholog is 100%.

Group of orthologs #1844. Best score 62 bits
Score difference with first non-orthologous sequence - A.capsulata:62 P.pallidum:62

C0NLQ3              	100.00%		D3B351              	100.00%
Bootstrap support for C0NLQ3 as seed ortholog is 100%.
Bootstrap support for D3B351 as seed ortholog is 100%.

Group of orthologs #1845. Best score 62 bits
Score difference with first non-orthologous sequence - A.capsulata:62 P.pallidum:62

C0NA29              	100.00%		D3BNJ0              	100.00%
Bootstrap support for C0NA29 as seed ortholog is 100%.
Bootstrap support for D3BNJ0 as seed ortholog is 100%.

Group of orthologs #1846. Best score 62 bits
Score difference with first non-orthologous sequence - A.capsulata:62 P.pallidum:62

C0NTE5              	100.00%		D3B5S6              	100.00%
Bootstrap support for C0NTE5 as seed ortholog is 100%.
Bootstrap support for D3B5S6 as seed ortholog is 100%.

Group of orthologs #1847. Best score 62 bits
Score difference with first non-orthologous sequence - A.capsulata:62 P.pallidum:62

C0NRS3              	100.00%		D3B891              	100.00%
Bootstrap support for C0NRS3 as seed ortholog is 100%.
Bootstrap support for D3B891 as seed ortholog is 100%.

Group of orthologs #1848. Best score 62 bits
Score difference with first non-orthologous sequence - A.capsulata:62 P.pallidum:62

C0NSK7              	100.00%		D3BAG7              	100.00%
Bootstrap support for C0NSK7 as seed ortholog is 100%.
Bootstrap support for D3BAG7 as seed ortholog is 100%.

Group of orthologs #1849. Best score 62 bits
Score difference with first non-orthologous sequence - A.capsulata:62 P.pallidum:62

C0NUG5              	100.00%		D3BBK6              	100.00%
Bootstrap support for C0NUG5 as seed ortholog is 100%.
Bootstrap support for D3BBK6 as seed ortholog is 100%.

Group of orthologs #1850. Best score 62 bits
Score difference with first non-orthologous sequence - A.capsulata:62 P.pallidum:62

C0NVY3              	100.00%		D3BEB9              	100.00%
Bootstrap support for C0NVY3 as seed ortholog is 100%.
Bootstrap support for D3BEB9 as seed ortholog is 100%.

Group of orthologs #1851. Best score 61 bits
Score difference with first non-orthologous sequence - A.capsulata:61 P.pallidum:61

C0NGT3              	100.00%		D3B6R0              	100.00%
Bootstrap support for C0NGT3 as seed ortholog is 100%.
Bootstrap support for D3B6R0 as seed ortholog is 100%.

Group of orthologs #1852. Best score 61 bits
Score difference with first non-orthologous sequence - A.capsulata:61 P.pallidum:61

C0NZX7              	100.00%		D3B637              	100.00%
Bootstrap support for C0NZX7 as seed ortholog is 100%.
Bootstrap support for D3B637 as seed ortholog is 100%.

Group of orthologs #1853. Best score 61 bits
Score difference with first non-orthologous sequence - A.capsulata:61 P.pallidum:61

C0NT54              	100.00%		D3BFH1              	100.00%
Bootstrap support for C0NT54 as seed ortholog is 100%.
Bootstrap support for D3BFH1 as seed ortholog is 100%.

Group of orthologs #1854. Best score 61 bits
Score difference with first non-orthologous sequence - A.capsulata:61 P.pallidum:61

C0NN01              	100.00%		D3BPJ7              	100.00%
Bootstrap support for C0NN01 as seed ortholog is 100%.
Bootstrap support for D3BPJ7 as seed ortholog is 100%.

Group of orthologs #1855. Best score 60 bits
Score difference with first non-orthologous sequence - A.capsulata:60 P.pallidum:60

C0NK04              	100.00%		D3B9D3              	100.00%
C0NK55              	55.99%		
Bootstrap support for C0NK04 as seed ortholog is 100%.
Bootstrap support for D3B9D3 as seed ortholog is 100%.

Group of orthologs #1856. Best score 60 bits
Score difference with first non-orthologous sequence - A.capsulata:60 P.pallidum:60

C0NF85              	100.00%		D3BUV9              	100.00%
C0NM12              	6.89%		
Bootstrap support for C0NF85 as seed ortholog is 100%.
Bootstrap support for D3BUV9 as seed ortholog is 100%.

Group of orthologs #1857. Best score 60 bits
Score difference with first non-orthologous sequence - A.capsulata:60 P.pallidum:60

C0NDS4              	100.00%		D3BC46              	100.00%
Bootstrap support for C0NDS4 as seed ortholog is 100%.
Bootstrap support for D3BC46 as seed ortholog is 100%.

Group of orthologs #1858. Best score 60 bits
Score difference with first non-orthologous sequence - A.capsulata:60 P.pallidum:60

C0NFE0              	100.00%		D3BKK9              	100.00%
Bootstrap support for C0NFE0 as seed ortholog is 100%.
Bootstrap support for D3BKK9 as seed ortholog is 100%.

Group of orthologs #1859. Best score 60 bits
Score difference with first non-orthologous sequence - A.capsulata:60 P.pallidum:60

C0NY61              	100.00%		D3BT01              	100.00%
Bootstrap support for C0NY61 as seed ortholog is 100%.
Bootstrap support for D3BT01 as seed ortholog is 100%.

Group of orthologs #1860. Best score 59 bits
Score difference with first non-orthologous sequence - A.capsulata:3 P.pallidum:59

C0NQW2              	100.00%		D3BGZ6              	100.00%
C0NVD0              	16.85%		
C0NYM2              	13.26%		
C0NQ91              	13.26%		
C0NTE0              	9.89%		
C0NQ95              	9.35%		
C0NAM2              	9.24%		
C0NFI5              	8.70%		
C0NFP6              	7.93%		
C0NWB0              	7.28%		
C0NGI6              	6.96%		
C0NCL6              	6.74%		
C0NB11              	6.20%		
C0NMI2              	6.20%		
C0NJA4              	5.33%		
C0NL03              	5.11%		
C0NLT5              	5.11%		
Bootstrap support for C0NQW2 as seed ortholog is 55%.
Alternative seed ortholog is C0NT04 (3 bits away from this cluster)
Bootstrap support for D3BGZ6 as seed ortholog is 100%.

Group of orthologs #1861. Best score 59 bits
Score difference with first non-orthologous sequence - A.capsulata:59 P.pallidum:59

C0NBW7              	100.00%		D3B194              	100.00%
Bootstrap support for C0NBW7 as seed ortholog is 100%.
Bootstrap support for D3B194 as seed ortholog is 100%.

Group of orthologs #1862. Best score 59 bits
Score difference with first non-orthologous sequence - A.capsulata:59 P.pallidum:59

C0NI15              	100.00%		D3AZR3              	100.00%
Bootstrap support for C0NI15 as seed ortholog is 100%.
Bootstrap support for D3AZR3 as seed ortholog is 100%.

Group of orthologs #1863. Best score 59 bits
Score difference with first non-orthologous sequence - A.capsulata:59 P.pallidum:59

C0NH45              	100.00%		D3B3Z9              	100.00%
Bootstrap support for C0NH45 as seed ortholog is 100%.
Bootstrap support for D3B3Z9 as seed ortholog is 100%.

Group of orthologs #1864. Best score 59 bits
Score difference with first non-orthologous sequence - A.capsulata:59 P.pallidum:59

C0NE40              	100.00%		D3BHE4              	100.00%
Bootstrap support for C0NE40 as seed ortholog is 100%.
Bootstrap support for D3BHE4 as seed ortholog is 100%.

Group of orthologs #1865. Best score 59 bits
Score difference with first non-orthologous sequence - A.capsulata:59 P.pallidum:59

C0NC31              	100.00%		D3BJI3              	100.00%
Bootstrap support for C0NC31 as seed ortholog is 100%.
Bootstrap support for D3BJI3 as seed ortholog is 100%.

Group of orthologs #1866. Best score 59 bits
Score difference with first non-orthologous sequence - A.capsulata:17 P.pallidum:59

C0NZF9              	100.00%		D3B438              	100.00%
Bootstrap support for C0NZF9 as seed ortholog is 62%.
Alternative seed ortholog is C0NNN5 (17 bits away from this cluster)
Bootstrap support for D3B438 as seed ortholog is 100%.

Group of orthologs #1867. Best score 59 bits
Score difference with first non-orthologous sequence - A.capsulata:59 P.pallidum:59

C0NIK8              	100.00%		D3BN97              	100.00%
Bootstrap support for C0NIK8 as seed ortholog is 100%.
Bootstrap support for D3BN97 as seed ortholog is 100%.

Group of orthologs #1868. Best score 58 bits
Score difference with first non-orthologous sequence - A.capsulata:58 P.pallidum:58

C0NVL5              	100.00%		D3BU79              	100.00%
C0NH59              	36.32%		
Bootstrap support for C0NVL5 as seed ortholog is 100%.
Bootstrap support for D3BU79 as seed ortholog is 100%.

Group of orthologs #1869. Best score 58 bits
Score difference with first non-orthologous sequence - A.capsulata:58 P.pallidum:58

C0NS94              	100.00%		D3AX05              	100.00%
Bootstrap support for C0NS94 as seed ortholog is 100%.
Bootstrap support for D3AX05 as seed ortholog is 100%.

Group of orthologs #1870. Best score 58 bits
Score difference with first non-orthologous sequence - A.capsulata:58 P.pallidum:58

C0NNX8              	100.00%		D3B1E5              	100.00%
Bootstrap support for C0NNX8 as seed ortholog is 100%.
Bootstrap support for D3B1E5 as seed ortholog is 100%.

Group of orthologs #1871. Best score 58 bits
Score difference with first non-orthologous sequence - A.capsulata:58 P.pallidum:58

C0NX55              	100.00%		D3B715              	100.00%
Bootstrap support for C0NX55 as seed ortholog is 100%.
Bootstrap support for D3B715 as seed ortholog is 100%.

Group of orthologs #1872. Best score 58 bits
Score difference with first non-orthologous sequence - A.capsulata:58 P.pallidum:58

C0NKN1              	100.00%		D3BIU2              	100.00%
Bootstrap support for C0NKN1 as seed ortholog is 100%.
Bootstrap support for D3BIU2 as seed ortholog is 100%.

Group of orthologs #1873. Best score 57 bits
Score difference with first non-orthologous sequence - A.capsulata:57 P.pallidum:57

C0NFM1              	100.00%		D3B7G6              	100.00%
C0NDE7              	17.55%		D3B7G5              	37.42%
C0NH70              	16.19%		
C0NA89              	13.10%		
C0NBD7              	12.98%		
C0NDB8              	12.48%		
C0NJ10              	9.64%		
Bootstrap support for C0NFM1 as seed ortholog is 100%.
Bootstrap support for D3B7G6 as seed ortholog is 100%.

Group of orthologs #1874. Best score 57 bits
Score difference with first non-orthologous sequence - A.capsulata:57 P.pallidum:57

C0NS90              	100.00%		D3BQ37              	100.00%
C0NXM5              	17.18%		D3BRA4              	28.13%
                    	       		D3BSH1              	27.27%
                    	       		D3AWE8              	20.19%
Bootstrap support for C0NS90 as seed ortholog is 100%.
Bootstrap support for D3BQ37 as seed ortholog is 100%.

Group of orthologs #1875. Best score 57 bits
Score difference with first non-orthologous sequence - A.capsulata:57 P.pallidum:57

C0NN46              	100.00%		D3B8K1              	100.00%
                    	       		D3B4A7              	7.90%
Bootstrap support for C0NN46 as seed ortholog is 100%.
Bootstrap support for D3B8K1 as seed ortholog is 100%.

Group of orthologs #1876. Best score 57 bits
Score difference with first non-orthologous sequence - A.capsulata:57 P.pallidum:57

C0NAV0              	100.00%		D3BHP3              	100.00%
Bootstrap support for C0NAV0 as seed ortholog is 100%.
Bootstrap support for D3BHP3 as seed ortholog is 100%.

Group of orthologs #1877. Best score 57 bits
Score difference with first non-orthologous sequence - A.capsulata:57 P.pallidum:57

C0NKB1              	100.00%		D3B8I3              	100.00%
Bootstrap support for C0NKB1 as seed ortholog is 100%.
Bootstrap support for D3B8I3 as seed ortholog is 100%.

Group of orthologs #1878. Best score 57 bits
Score difference with first non-orthologous sequence - A.capsulata:57 P.pallidum:57

C0NKQ4              	100.00%		D3BAB3              	100.00%
Bootstrap support for C0NKQ4 as seed ortholog is 100%.
Bootstrap support for D3BAB3 as seed ortholog is 100%.

Group of orthologs #1879. Best score 57 bits
Score difference with first non-orthologous sequence - A.capsulata:57 P.pallidum:57

C0NJM8              	100.00%		D3BDM9              	100.00%
Bootstrap support for C0NJM8 as seed ortholog is 100%.
Bootstrap support for D3BDM9 as seed ortholog is 100%.

Group of orthologs #1880. Best score 57 bits
Score difference with first non-orthologous sequence - A.capsulata:57 P.pallidum:57

C0NAU9              	100.00%		D3BRN9              	100.00%
Bootstrap support for C0NAU9 as seed ortholog is 100%.
Bootstrap support for D3BRN9 as seed ortholog is 100%.

Group of orthologs #1881. Best score 57 bits
Score difference with first non-orthologous sequence - A.capsulata:57 P.pallidum:57

C0NPC3              	100.00%		D3BM28              	100.00%
Bootstrap support for C0NPC3 as seed ortholog is 100%.
Bootstrap support for D3BM28 as seed ortholog is 100%.

Group of orthologs #1882. Best score 57 bits
Score difference with first non-orthologous sequence - A.capsulata:57 P.pallidum:57

C0NV63              	100.00%		D3BHC6              	100.00%
Bootstrap support for C0NV63 as seed ortholog is 100%.
Bootstrap support for D3BHC6 as seed ortholog is 100%.

Group of orthologs #1883. Best score 57 bits
Score difference with first non-orthologous sequence - A.capsulata:57 P.pallidum:57

C0NR44              	100.00%		D3BNN0              	100.00%
Bootstrap support for C0NR44 as seed ortholog is 100%.
Bootstrap support for D3BNN0 as seed ortholog is 100%.

Group of orthologs #1884. Best score 57 bits
Score difference with first non-orthologous sequence - A.capsulata:57 P.pallidum:57

C0NV75              	100.00%		D3BT78              	100.00%
Bootstrap support for C0NV75 as seed ortholog is 100%.
Bootstrap support for D3BT78 as seed ortholog is 100%.

Group of orthologs #1885. Best score 56 bits
Score difference with first non-orthologous sequence - A.capsulata:56 P.pallidum:8

C0P152              	100.00%		D3B687              	100.00%
                    	       		D3BTX0              	95.11%
                    	       		D3B689              	94.57%
                    	       		D3B692              	89.40%
                    	       		D3BHK6              	35.05%
Bootstrap support for C0P152 as seed ortholog is 100%.
Bootstrap support for D3B687 as seed ortholog is 64%.
Alternative seed ortholog is D3B498 (8 bits away from this cluster)

Group of orthologs #1886. Best score 56 bits
Score difference with first non-orthologous sequence - A.capsulata:56 P.pallidum:56

C0NV69              	100.00%		D3BT83              	100.00%
                    	       		D3B4Y7              	15.06%
                    	       		D3B9Y7              	9.81%
Bootstrap support for C0NV69 as seed ortholog is 100%.
Bootstrap support for D3BT83 as seed ortholog is 100%.

Group of orthologs #1887. Best score 56 bits
Score difference with first non-orthologous sequence - A.capsulata:56 P.pallidum:56

C0P060              	100.00%		D3AYC0              	100.00%
C0NSD9              	8.18%		
Bootstrap support for C0P060 as seed ortholog is 100%.
Bootstrap support for D3AYC0 as seed ortholog is 100%.

Group of orthologs #1888. Best score 56 bits
Score difference with first non-orthologous sequence - A.capsulata:56 P.pallidum:56

C0NQA8              	100.00%		Q9NDL2              	100.00%
C0NNG2              	30.12%		
Bootstrap support for C0NQA8 as seed ortholog is 100%.
Bootstrap support for Q9NDL2 as seed ortholog is 100%.

Group of orthologs #1889. Best score 56 bits
Score difference with first non-orthologous sequence - A.capsulata:56 P.pallidum:56

C0NCK7              	100.00%		D3AXF0              	100.00%
Bootstrap support for C0NCK7 as seed ortholog is 100%.
Bootstrap support for D3AXF0 as seed ortholog is 100%.

Group of orthologs #1890. Best score 56 bits
Score difference with first non-orthologous sequence - A.capsulata:56 P.pallidum:56

C0NCJ5              	100.00%		D3B2B2              	100.00%
Bootstrap support for C0NCJ5 as seed ortholog is 100%.
Bootstrap support for D3B2B2 as seed ortholog is 100%.

Group of orthologs #1891. Best score 56 bits
Score difference with first non-orthologous sequence - A.capsulata:56 P.pallidum:56

C0NJF3              	100.00%		D3B1N4              	100.00%
Bootstrap support for C0NJF3 as seed ortholog is 100%.
Bootstrap support for D3B1N4 as seed ortholog is 100%.

Group of orthologs #1892. Best score 56 bits
Score difference with first non-orthologous sequence - A.capsulata:56 P.pallidum:56

C0NFR0              	100.00%		D3B5Z9              	100.00%
Bootstrap support for C0NFR0 as seed ortholog is 100%.
Bootstrap support for D3B5Z9 as seed ortholog is 100%.

Group of orthologs #1893. Best score 56 bits
Score difference with first non-orthologous sequence - A.capsulata:56 P.pallidum:12

C0NH90              	100.00%		D3BAZ9              	100.00%
Bootstrap support for C0NH90 as seed ortholog is 100%.
Bootstrap support for D3BAZ9 as seed ortholog is 69%.
Alternative seed ortholog is D3BMR8 (12 bits away from this cluster)

Group of orthologs #1894. Best score 56 bits
Score difference with first non-orthologous sequence - A.capsulata:16 P.pallidum:56

C0NU02              	100.00%		D3BCH8              	100.00%
Bootstrap support for C0NU02 as seed ortholog is 35%.
Alternative seed ortholog is C0NBH3 (16 bits away from this cluster)
Bootstrap support for D3BCH8 as seed ortholog is 100%.

Group of orthologs #1895. Best score 56 bits
Score difference with first non-orthologous sequence - A.capsulata:56 P.pallidum:56

C0NXL1              	100.00%		D3BFE1              	100.00%
Bootstrap support for C0NXL1 as seed ortholog is 100%.
Bootstrap support for D3BFE1 as seed ortholog is 100%.

Group of orthologs #1896. Best score 56 bits
Score difference with first non-orthologous sequence - A.capsulata:56 P.pallidum:56

C0P175              	100.00%		D3BDZ5              	100.00%
Bootstrap support for C0P175 as seed ortholog is 100%.
Bootstrap support for D3BDZ5 as seed ortholog is 100%.

Group of orthologs #1897. Best score 56 bits
Score difference with first non-orthologous sequence - A.capsulata:56 P.pallidum:56

C0P0G9              	100.00%		D3BQJ6              	100.00%
Bootstrap support for C0P0G9 as seed ortholog is 100%.
Bootstrap support for D3BQJ6 as seed ortholog is 100%.

Group of orthologs #1898. Best score 55 bits
Score difference with first non-orthologous sequence - A.capsulata:10 P.pallidum:55

C0NRD1              	100.00%		D3AVS5              	100.00%
C0NXI9              	10.20%		D3AVS6              	51.33%
                    	       		D3AVS7              	22.43%
Bootstrap support for C0NRD1 as seed ortholog is 65%.
Alternative seed ortholog is C0NYN5 (10 bits away from this cluster)
Bootstrap support for D3AVS5 as seed ortholog is 100%.

Group of orthologs #1899. Best score 55 bits
Score difference with first non-orthologous sequence - A.capsulata:55 P.pallidum:55

C0NNN8              	100.00%		D3AW72              	100.00%
                    	       		D3BGW7              	100.00%
Bootstrap support for C0NNN8 as seed ortholog is 100%.
Bootstrap support for D3AW72 as seed ortholog is 100%.
Bootstrap support for D3BGW7 as seed ortholog is 100%.

Group of orthologs #1900. Best score 55 bits
Score difference with first non-orthologous sequence - A.capsulata:55 P.pallidum:55

C0NV26              	100.00%		D3BU99              	100.00%
                    	       		D3BIM3              	7.29%
Bootstrap support for C0NV26 as seed ortholog is 100%.
Bootstrap support for D3BU99 as seed ortholog is 100%.

Group of orthologs #1901. Best score 55 bits
Score difference with first non-orthologous sequence - A.capsulata:55 P.pallidum:55

C0NCF3              	100.00%		D3B2T7              	100.00%
Bootstrap support for C0NCF3 as seed ortholog is 100%.
Bootstrap support for D3B2T7 as seed ortholog is 100%.

Group of orthologs #1902. Best score 55 bits
Score difference with first non-orthologous sequence - A.capsulata:55 P.pallidum:10

C0NKI6              	100.00%		D3B0J7              	100.00%
Bootstrap support for C0NKI6 as seed ortholog is 100%.
Bootstrap support for D3B0J7 as seed ortholog is 71%.
Alternative seed ortholog is D3BUN0 (10 bits away from this cluster)

Group of orthologs #1903. Best score 55 bits
Score difference with first non-orthologous sequence - A.capsulata:55 P.pallidum:55

C0NJQ9              	100.00%		D3B9C9              	100.00%
Bootstrap support for C0NJQ9 as seed ortholog is 100%.
Bootstrap support for D3B9C9 as seed ortholog is 100%.

Group of orthologs #1904. Best score 55 bits
Score difference with first non-orthologous sequence - A.capsulata:55 P.pallidum:55

C0NRP9              	100.00%		D3BEF4              	100.00%
Bootstrap support for C0NRP9 as seed ortholog is 100%.
Bootstrap support for D3BEF4 as seed ortholog is 100%.

Group of orthologs #1905. Best score 55 bits
Score difference with first non-orthologous sequence - A.capsulata:55 P.pallidum:55

C0P1A9              	100.00%		D3B591              	100.00%
Bootstrap support for C0P1A9 as seed ortholog is 100%.
Bootstrap support for D3B591 as seed ortholog is 100%.

Group of orthologs #1906. Best score 55 bits
Score difference with first non-orthologous sequence - A.capsulata:55 P.pallidum:7

C0NRZ9              	100.00%		D3BMC1              	100.00%
Bootstrap support for C0NRZ9 as seed ortholog is 100%.
Bootstrap support for D3BMC1 as seed ortholog is 54%.
Alternative seed ortholog is D3B4G7 (7 bits away from this cluster)

Group of orthologs #1907. Best score 55 bits
Score difference with first non-orthologous sequence - A.capsulata:55 P.pallidum:55

C0NZ92              	100.00%		D3BR66              	100.00%
Bootstrap support for C0NZ92 as seed ortholog is 100%.
Bootstrap support for D3BR66 as seed ortholog is 100%.

Group of orthologs #1908. Best score 54 bits
Score difference with first non-orthologous sequence - A.capsulata:54 P.pallidum:54

C0NHP1              	100.00%		D3BR91              	100.00%
C0NTX5              	16.12%		D3BDK1              	22.10%
Bootstrap support for C0NHP1 as seed ortholog is 100%.
Bootstrap support for D3BR91 as seed ortholog is 100%.

Group of orthologs #1909. Best score 54 bits
Score difference with first non-orthologous sequence - A.capsulata:54 P.pallidum:54

C0NCP9              	100.00%		D3B4A6              	100.00%
Bootstrap support for C0NCP9 as seed ortholog is 100%.
Bootstrap support for D3B4A6 as seed ortholog is 100%.

Group of orthologs #1910. Best score 54 bits
Score difference with first non-orthologous sequence - A.capsulata:54 P.pallidum:54

C0NZW6              	100.00%		D3AWB5              	100.00%
Bootstrap support for C0NZW6 as seed ortholog is 100%.
Bootstrap support for D3AWB5 as seed ortholog is 100%.

Group of orthologs #1911. Best score 54 bits
Score difference with first non-orthologous sequence - A.capsulata:54 P.pallidum:54

C0NMX2              	100.00%		D3BHS9              	100.00%
Bootstrap support for C0NMX2 as seed ortholog is 100%.
Bootstrap support for D3BHS9 as seed ortholog is 100%.

Group of orthologs #1912. Best score 54 bits
Score difference with first non-orthologous sequence - A.capsulata:54 P.pallidum:54

C0NXC4              	100.00%		D3BG33              	100.00%
Bootstrap support for C0NXC4 as seed ortholog is 100%.
Bootstrap support for D3BG33 as seed ortholog is 100%.

Group of orthologs #1913. Best score 53 bits
Score difference with first non-orthologous sequence - A.capsulata:53 P.pallidum:53

C0ND47              	100.00%		D3B0F0              	100.00%
Bootstrap support for C0ND47 as seed ortholog is 100%.
Bootstrap support for D3B0F0 as seed ortholog is 100%.

Group of orthologs #1914. Best score 53 bits
Score difference with first non-orthologous sequence - A.capsulata:53 P.pallidum:53

C0NXF6              	100.00%		D3BF45              	100.00%
Bootstrap support for C0NXF6 as seed ortholog is 100%.
Bootstrap support for D3BF45 as seed ortholog is 100%.

Group of orthologs #1915. Best score 52 bits
Score difference with first non-orthologous sequence - A.capsulata:52 P.pallidum:52

C0NLQ1              	100.00%		D3BE38              	100.00%
Bootstrap support for C0NLQ1 as seed ortholog is 100%.
Bootstrap support for D3BE38 as seed ortholog is 100%.

Group of orthologs #1916. Best score 52 bits
Score difference with first non-orthologous sequence - A.capsulata:52 P.pallidum:52

C0NTB3              	100.00%		D3B7V9              	100.00%
Bootstrap support for C0NTB3 as seed ortholog is 100%.
Bootstrap support for D3B7V9 as seed ortholog is 100%.

Group of orthologs #1917. Best score 52 bits
Score difference with first non-orthologous sequence - A.capsulata:52 P.pallidum:52

C0NGD2              	100.00%		D3BSQ2              	100.00%
Bootstrap support for C0NGD2 as seed ortholog is 100%.
Bootstrap support for D3BSQ2 as seed ortholog is 100%.

Group of orthologs #1918. Best score 52 bits
Score difference with first non-orthologous sequence - A.capsulata:52 P.pallidum:52

C0NWI9              	100.00%		D3BP56              	100.00%
Bootstrap support for C0NWI9 as seed ortholog is 100%.
Bootstrap support for D3BP56 as seed ortholog is 100%.

Group of orthologs #1919. Best score 51 bits
Score difference with first non-orthologous sequence - A.capsulata:51 P.pallidum:51

C0NZP0              	100.00%		D3BMI5              	100.00%
C0NDK2              	9.87%		
Bootstrap support for C0NZP0 as seed ortholog is 100%.
Bootstrap support for D3BMI5 as seed ortholog is 100%.

Group of orthologs #1920. Best score 51 bits
Score difference with first non-orthologous sequence - A.capsulata:51 P.pallidum:51

C0NIE2              	100.00%		D3AWJ6              	100.00%
Bootstrap support for C0NIE2 as seed ortholog is 100%.
Bootstrap support for D3AWJ6 as seed ortholog is 100%.

Group of orthologs #1921. Best score 51 bits
Score difference with first non-orthologous sequence - A.capsulata:51 P.pallidum:51

C0NBH4              	100.00%		D3BJD5              	100.00%
Bootstrap support for C0NBH4 as seed ortholog is 100%.
Bootstrap support for D3BJD5 as seed ortholog is 100%.

Group of orthologs #1922. Best score 51 bits
Score difference with first non-orthologous sequence - A.capsulata:51 P.pallidum:51

C0NQK3              	100.00%		D3BUL3              	100.00%
Bootstrap support for C0NQK3 as seed ortholog is 100%.
Bootstrap support for D3BUL3 as seed ortholog is 100%.

Group of orthologs #1923. Best score 51 bits
Score difference with first non-orthologous sequence - A.capsulata:51 P.pallidum:51

C0NTL3              	100.00%		D3BVL3              	100.00%
Bootstrap support for C0NTL3 as seed ortholog is 100%.
Bootstrap support for D3BVL3 as seed ortholog is 100%.

Group of orthologs #1924. Best score 50 bits
Score difference with first non-orthologous sequence - A.capsulata:50 P.pallidum:50

C0NVY0              	100.00%		D3BJL5              	100.00%
C0NJB2              	10.16%		
Bootstrap support for C0NVY0 as seed ortholog is 100%.
Bootstrap support for D3BJL5 as seed ortholog is 100%.

Group of orthologs #1925. Best score 50 bits
Score difference with first non-orthologous sequence - A.capsulata:50 P.pallidum:50

C0NE88              	100.00%		D3B5J3              	100.00%
Bootstrap support for C0NE88 as seed ortholog is 100%.
Bootstrap support for D3B5J3 as seed ortholog is 100%.

Group of orthologs #1926. Best score 50 bits
Score difference with first non-orthologous sequence - A.capsulata:50 P.pallidum:50

C0ND07              	100.00%		D3BCJ9              	100.00%
Bootstrap support for C0ND07 as seed ortholog is 100%.
Bootstrap support for D3BCJ9 as seed ortholog is 100%.

Group of orthologs #1927. Best score 50 bits
Score difference with first non-orthologous sequence - A.capsulata:50 P.pallidum:50

C0NDR0              	100.00%		D3BGV9              	100.00%
Bootstrap support for C0NDR0 as seed ortholog is 100%.
Bootstrap support for D3BGV9 as seed ortholog is 100%.

Group of orthologs #1928. Best score 50 bits
Score difference with first non-orthologous sequence - A.capsulata:50 P.pallidum:50

C0NEH0              	100.00%		D3BJE0              	100.00%
Bootstrap support for C0NEH0 as seed ortholog is 100%.
Bootstrap support for D3BJE0 as seed ortholog is 100%.

Group of orthologs #1929. Best score 50 bits
Score difference with first non-orthologous sequence - A.capsulata:50 P.pallidum:50

C0NAM9              	100.00%		D3BQT8              	100.00%
Bootstrap support for C0NAM9 as seed ortholog is 100%.
Bootstrap support for D3BQT8 as seed ortholog is 100%.

Group of orthologs #1930. Best score 50 bits
Score difference with first non-orthologous sequence - A.capsulata:4 P.pallidum:50

C0NT79              	100.00%		D3BCD6              	100.00%
Bootstrap support for C0NT79 as seed ortholog is 42%.
Alternative seed ortholog is C0NY19 (4 bits away from this cluster)
Bootstrap support for D3BCD6 as seed ortholog is 100%.

Group of orthologs #1931. Best score 50 bits
Score difference with first non-orthologous sequence - A.capsulata:50 P.pallidum:50

C0NHL0              	100.00%		D3BR17              	100.00%
Bootstrap support for C0NHL0 as seed ortholog is 100%.
Bootstrap support for D3BR17 as seed ortholog is 100%.

Group of orthologs #1932. Best score 50 bits
Score difference with first non-orthologous sequence - A.capsulata:50 P.pallidum:50

C0NQI2              	100.00%		D3BPR9              	100.00%
Bootstrap support for C0NQI2 as seed ortholog is 100%.
Bootstrap support for D3BPR9 as seed ortholog is 100%.

Group of orthologs #1933. Best score 50 bits
Score difference with first non-orthologous sequence - A.capsulata:50 P.pallidum:50

C0NYG6              	100.00%		D3BK55              	100.00%
Bootstrap support for C0NYG6 as seed ortholog is 100%.
Bootstrap support for D3BK55 as seed ortholog is 100%.

Group of orthologs #1934. Best score 50 bits
Score difference with first non-orthologous sequence - A.capsulata:50 P.pallidum:50

C0NZB8              	100.00%		D3BTJ2              	100.00%
Bootstrap support for C0NZB8 as seed ortholog is 100%.
Bootstrap support for D3BTJ2 as seed ortholog is 100%.

Group of orthologs #1935. Best score 49 bits
Score difference with first non-orthologous sequence - A.capsulata:49 P.pallidum:49

C0NBZ2              	100.00%		D3BNM7              	100.00%
                    	       		D3B2K6              	13.09%
                    	       		D3B4U4              	11.55%
                    	       		D3BHM4              	9.24%
Bootstrap support for C0NBZ2 as seed ortholog is 100%.
Bootstrap support for D3BNM7 as seed ortholog is 100%.

Group of orthologs #1936. Best score 49 bits
Score difference with first non-orthologous sequence - A.capsulata:49 P.pallidum:49

C0NNY7              	100.00%		D3B8S7              	100.00%
Bootstrap support for C0NNY7 as seed ortholog is 100%.
Bootstrap support for D3B8S7 as seed ortholog is 100%.

Group of orthologs #1937. Best score 49 bits
Score difference with first non-orthologous sequence - A.capsulata:49 P.pallidum:49

C0P0G1              	100.00%		D3B6P6              	100.00%
Bootstrap support for C0P0G1 as seed ortholog is 100%.
Bootstrap support for D3B6P6 as seed ortholog is 100%.

Group of orthologs #1938. Best score 48 bits
Score difference with first non-orthologous sequence - A.capsulata:48 P.pallidum:48

C0NIE5              	100.00%		D3BLB7              	100.00%
                    	       		D3BEB8              	11.29%
                    	       		D3B9V4              	7.37%
                    	       		D3B3S1              	6.45%
Bootstrap support for C0NIE5 as seed ortholog is 100%.
Bootstrap support for D3BLB7 as seed ortholog is 100%.

Group of orthologs #1939. Best score 48 bits
Score difference with first non-orthologous sequence - A.capsulata:48 P.pallidum:48

C0NUJ9              	100.00%		D3AVL4              	100.00%
Bootstrap support for C0NUJ9 as seed ortholog is 100%.
Bootstrap support for D3AVL4 as seed ortholog is 100%.

Group of orthologs #1940. Best score 48 bits
Score difference with first non-orthologous sequence - A.capsulata:48 P.pallidum:48

C0NCD8              	100.00%		D3BKA6              	100.00%
Bootstrap support for C0NCD8 as seed ortholog is 100%.
Bootstrap support for D3BKA6 as seed ortholog is 100%.

Group of orthologs #1941. Best score 48 bits
Score difference with first non-orthologous sequence - A.capsulata:48 P.pallidum:48

C0NY07              	100.00%		D3B246              	100.00%
Bootstrap support for C0NY07 as seed ortholog is 100%.
Bootstrap support for D3B246 as seed ortholog is 100%.

Group of orthologs #1942. Best score 48 bits
Score difference with first non-orthologous sequence - A.capsulata:48 P.pallidum:48

C0NM28              	100.00%		D3BIG1              	100.00%
Bootstrap support for C0NM28 as seed ortholog is 100%.
Bootstrap support for D3BIG1 as seed ortholog is 100%.

Group of orthologs #1943. Best score 48 bits
Score difference with first non-orthologous sequence - A.capsulata:48 P.pallidum:48

C0NR32              	100.00%		D3BHQ4              	100.00%
Bootstrap support for C0NR32 as seed ortholog is 100%.
Bootstrap support for D3BHQ4 as seed ortholog is 100%.

Group of orthologs #1944. Best score 47 bits
Score difference with first non-orthologous sequence - A.capsulata:47 P.pallidum:47

C0NPC1              	100.00%		D3B556              	100.00%
                    	       		D3BTW1              	22.01%
                    	       		D3BE69              	7.98%
                    	       		D3AZ81              	6.31%
                    	       		D3BH37              	5.79%
                    	       		D3AZ97              	5.79%
                    	       		D3BQH6              	5.53%
Bootstrap support for C0NPC1 as seed ortholog is 100%.
Bootstrap support for D3B556 as seed ortholog is 100%.

Group of orthologs #1945. Best score 47 bits
Score difference with first non-orthologous sequence - A.capsulata:47 P.pallidum:47

C0NSD4              	100.00%		D3BJ80              	100.00%
Bootstrap support for C0NSD4 as seed ortholog is 100%.
Bootstrap support for D3BJ80 as seed ortholog is 100%.

Group of orthologs #1946. Best score 47 bits
Score difference with first non-orthologous sequence - A.capsulata:47 P.pallidum:47

C0NRN2              	100.00%		D3BQH0              	100.00%
Bootstrap support for C0NRN2 as seed ortholog is 100%.
Bootstrap support for D3BQH0 as seed ortholog is 100%.

Group of orthologs #1947. Best score 46 bits
Score difference with first non-orthologous sequence - A.capsulata:46 P.pallidum:46

C0NPB0              	100.00%		D3BJ51              	100.00%
C0NW94              	5.43%		
Bootstrap support for C0NPB0 as seed ortholog is 100%.
Bootstrap support for D3BJ51 as seed ortholog is 100%.

Group of orthologs #1948. Best score 46 bits
Score difference with first non-orthologous sequence - A.capsulata:46 P.pallidum:46

C0NG58              	100.00%		D3BF01              	100.00%
Bootstrap support for C0NG58 as seed ortholog is 100%.
Bootstrap support for D3BF01 as seed ortholog is 100%.

Group of orthologs #1949. Best score 46 bits
Score difference with first non-orthologous sequence - A.capsulata:46 P.pallidum:46

C0NIQ1              	100.00%		D3BPY4              	100.00%
Bootstrap support for C0NIQ1 as seed ortholog is 100%.
Bootstrap support for D3BPY4 as seed ortholog is 100%.

Group of orthologs #1950. Best score 45 bits
Score difference with first non-orthologous sequence - A.capsulata:45 P.pallidum:45

C0NEP2              	100.00%		D3B0F4              	100.00%
Bootstrap support for C0NEP2 as seed ortholog is 100%.
Bootstrap support for D3B0F4 as seed ortholog is 100%.

Group of orthologs #1951. Best score 45 bits
Score difference with first non-orthologous sequence - A.capsulata:45 P.pallidum:45

C0NUA3              	100.00%		D3B8C0              	100.00%
Bootstrap support for C0NUA3 as seed ortholog is 100%.
Bootstrap support for D3B8C0 as seed ortholog is 100%.

Group of orthologs #1952. Best score 45 bits
Score difference with first non-orthologous sequence - A.capsulata:45 P.pallidum:45

C0NVC2              	100.00%		D3BE77              	100.00%
Bootstrap support for C0NVC2 as seed ortholog is 100%.
Bootstrap support for D3BE77 as seed ortholog is 100%.

Group of orthologs #1953. Best score 44 bits
Score difference with first non-orthologous sequence - A.capsulata:44 P.pallidum:44

C0NV24              	100.00%		D3B0P5              	100.00%
Bootstrap support for C0NV24 as seed ortholog is 100%.
Bootstrap support for D3B0P5 as seed ortholog is 100%.

Group of orthologs #1954. Best score 44 bits
Score difference with first non-orthologous sequence - A.capsulata:44 P.pallidum:44

C0NHS9              	100.00%		D3BMD5              	100.00%
Bootstrap support for C0NHS9 as seed ortholog is 100%.
Bootstrap support for D3BMD5 as seed ortholog is 100%.

Group of orthologs #1955. Best score 44 bits
Score difference with first non-orthologous sequence - A.capsulata:44 P.pallidum:44

C0NW32              	100.00%		D3BAU2              	100.00%
Bootstrap support for C0NW32 as seed ortholog is 100%.
Bootstrap support for D3BAU2 as seed ortholog is 100%.

Group of orthologs #1956. Best score 43 bits
Score difference with first non-orthologous sequence - A.capsulata:43 P.pallidum:43

C0NFN4              	100.00%		D3B9G3              	100.00%
Bootstrap support for C0NFN4 as seed ortholog is 100%.
Bootstrap support for D3B9G3 as seed ortholog is 100%.

Group of orthologs #1957. Best score 43 bits
Score difference with first non-orthologous sequence - A.capsulata:43 P.pallidum:43

C0P0A9              	100.00%		D3AYF0              	100.00%
Bootstrap support for C0P0A9 as seed ortholog is 100%.
Bootstrap support for D3AYF0 as seed ortholog is 100%.

Group of orthologs #1958. Best score 43 bits
Score difference with first non-orthologous sequence - A.capsulata:43 P.pallidum:43

C0NJZ7              	100.00%		D3BU48              	100.00%
Bootstrap support for C0NJZ7 as seed ortholog is 100%.
Bootstrap support for D3BU48 as seed ortholog is 100%.

Group of orthologs #1959. Best score 42 bits
Score difference with first non-orthologous sequence - A.capsulata:42 P.pallidum:42

C0NV10              	100.00%		D3BL89              	100.00%
C0NLL4              	5.45%		
Bootstrap support for C0NV10 as seed ortholog is 100%.
Bootstrap support for D3BL89 as seed ortholog is 100%.

Group of orthologs #1960. Best score 42 bits
Score difference with first non-orthologous sequence - A.capsulata:42 P.pallidum:42

C0NJS6              	100.00%		D3B8P6              	100.00%
Bootstrap support for C0NJS6 as seed ortholog is 100%.
Bootstrap support for D3B8P6 as seed ortholog is 100%.

Group of orthologs #1961. Best score 42 bits
Score difference with first non-orthologous sequence - A.capsulata:42 P.pallidum:42

C0NKG4              	100.00%		D3BNY0              	100.00%
Bootstrap support for C0NKG4 as seed ortholog is 100%.
Bootstrap support for D3BNY0 as seed ortholog is 100%.

Group of orthologs #1962. Best score 40 bits
Score difference with first non-orthologous sequence - A.capsulata:40 P.pallidum:40

C0NGJ0              	100.00%		D3BIU9              	100.00%
                    	       		D3BFG1              	78.05%
                    	       		D3BLX7              	11.72%
                    	       		D3BDB7              	7.98%
                    	       		D3BNM6              	7.23%
Bootstrap support for C0NGJ0 as seed ortholog is 100%.
Bootstrap support for D3BIU9 as seed ortholog is 100%.