###################################
319 groups of orthologs
406 in-paralogs from A.gossypii
370 in-paralogs from P.aerophilum
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 779 bits
Score difference with first non-orthologous sequence - A.gossypii:57 P.aerophilum:779

Q753Q4              	100.00%		Q8ZYQ9              	100.00%
Bootstrap support for Q753Q4 as seed ortholog is 78%.
Bootstrap support for Q8ZYQ9 as seed ortholog is 100%.

Group of orthologs #2. Best score 748 bits
Score difference with first non-orthologous sequence - A.gossypii:748 P.aerophilum:748

Q75D66              	100.00%		Q8ZY48              	100.00%
Bootstrap support for Q75D66 as seed ortholog is 100%.
Bootstrap support for Q8ZY48 as seed ortholog is 100%.

Group of orthologs #3. Best score 629 bits
Score difference with first non-orthologous sequence - A.gossypii:122 P.aerophilum:629

Q754B2              	100.00%		Q8ZYN4              	100.00%
                    	       		Q8ZTN5              	35.76%
Bootstrap support for Q754B2 as seed ortholog is 98%.
Bootstrap support for Q8ZYN4 as seed ortholog is 100%.

Group of orthologs #4. Best score 628 bits
Score difference with first non-orthologous sequence - A.gossypii:242 P.aerophilum:628

Q756K2              	100.00%		Q8ZYQ8              	100.00%
Bootstrap support for Q756K2 as seed ortholog is 99%.
Bootstrap support for Q8ZYQ8 as seed ortholog is 100%.

Group of orthologs #5. Best score 502 bits
Score difference with first non-orthologous sequence - A.gossypii:502 P.aerophilum:220

Q758X0              	100.00%		O93730              	100.00%
Q750T7              	29.09%		Q8ZV36              	7.18%
                    	       		Q8ZUB3              	5.95%
Bootstrap support for Q758X0 as seed ortholog is 100%.
Bootstrap support for O93730 as seed ortholog is 99%.

Group of orthologs #6. Best score 495 bits
Score difference with first non-orthologous sequence - A.gossypii:263 P.aerophilum:495

Q755X4              	100.00%		Q8ZWU4              	100.00%
Bootstrap support for Q755X4 as seed ortholog is 99%.
Bootstrap support for Q8ZWU4 as seed ortholog is 100%.

Group of orthologs #7. Best score 490 bits
Score difference with first non-orthologous sequence - A.gossypii:372 P.aerophilum:490

Q9UVJ8              	100.00%		Q8ZYR1              	100.00%
Bootstrap support for Q9UVJ8 as seed ortholog is 100%.
Bootstrap support for Q8ZYR1 as seed ortholog is 100%.

Group of orthologs #8. Best score 487 bits
Score difference with first non-orthologous sequence - A.gossypii:356 P.aerophilum:487

Q75BE4              	100.00%		Q8ZXR2              	100.00%
Bootstrap support for Q75BE4 as seed ortholog is 100%.
Bootstrap support for Q8ZXR2 as seed ortholog is 100%.

Group of orthologs #9. Best score 477 bits
Score difference with first non-orthologous sequence - A.gossypii:268 P.aerophilum:477

Q754C8              	100.00%		Q8ZZC1              	100.00%
Bootstrap support for Q754C8 as seed ortholog is 100%.
Bootstrap support for Q8ZZC1 as seed ortholog is 100%.

Group of orthologs #10. Best score 465 bits
Score difference with first non-orthologous sequence - A.gossypii:465 P.aerophilum:465

Q75CN6              	100.00%		Q8ZYU6              	100.00%
Bootstrap support for Q75CN6 as seed ortholog is 100%.
Bootstrap support for Q8ZYU6 as seed ortholog is 100%.

Group of orthologs #11. Best score 442 bits
Score difference with first non-orthologous sequence - A.gossypii:333 P.aerophilum:442

Q74ZS3              	100.00%		Q8ZVC5              	100.00%
Bootstrap support for Q74ZS3 as seed ortholog is 100%.
Bootstrap support for Q8ZVC5 as seed ortholog is 100%.

Group of orthologs #12. Best score 437 bits
Score difference with first non-orthologous sequence - A.gossypii:128 P.aerophilum:365

P41752              	100.00%		O93729              	100.00%
Bootstrap support for P41752 as seed ortholog is 99%.
Bootstrap support for O93729 as seed ortholog is 100%.

Group of orthologs #13. Best score 423 bits
Score difference with first non-orthologous sequence - A.gossypii:423 P.aerophilum:423

Q756B7              	100.00%		Q8ZT92              	100.00%
Bootstrap support for Q756B7 as seed ortholog is 100%.
Bootstrap support for Q8ZT92 as seed ortholog is 100%.

Group of orthologs #14. Best score 422 bits
Score difference with first non-orthologous sequence - A.gossypii:422 P.aerophilum:422

Q751L7              	100.00%		Q8ZSY7              	100.00%
Bootstrap support for Q751L7 as seed ortholog is 100%.
Bootstrap support for Q8ZSY7 as seed ortholog is 100%.

Group of orthologs #15. Best score 405 bits
Score difference with first non-orthologous sequence - A.gossypii:32 P.aerophilum:405

Q74Z89              	100.00%		Q8ZTF8              	100.00%
                    	       		Q8ZVU7              	28.31%
Bootstrap support for Q74Z89 as seed ortholog is 76%.
Bootstrap support for Q8ZTF8 as seed ortholog is 100%.

Group of orthologs #16. Best score 388 bits
Score difference with first non-orthologous sequence - A.gossypii:276 P.aerophilum:388

Q75C64              	100.00%		Q8ZYM0              	100.00%
Bootstrap support for Q75C64 as seed ortholog is 100%.
Bootstrap support for Q8ZYM0 as seed ortholog is 100%.

Group of orthologs #17. Best score 385 bits
Score difference with first non-orthologous sequence - A.gossypii:1 P.aerophilum:385

Q75AE3              	100.00%		Q8ZY88              	100.00%
Bootstrap support for Q75AE3 as seed ortholog is 49%.
Alternative seed ortholog is Q74ZC3 (1 bits away from this cluster)
Bootstrap support for Q8ZY88 as seed ortholog is 100%.

Group of orthologs #18. Best score 374 bits
Score difference with first non-orthologous sequence - A.gossypii:245 P.aerophilum:374

Q75F16              	100.00%		Q8ZXT6              	100.00%
Bootstrap support for Q75F16 as seed ortholog is 99%.
Bootstrap support for Q8ZXT6 as seed ortholog is 100%.

Group of orthologs #19. Best score 365 bits
Score difference with first non-orthologous sequence - A.gossypii:252 P.aerophilum:365

Q74Z74              	100.00%		Q8ZU56              	100.00%
Bootstrap support for Q74Z74 as seed ortholog is 100%.
Bootstrap support for Q8ZU56 as seed ortholog is 100%.

Group of orthologs #20. Best score 365 bits
Score difference with first non-orthologous sequence - A.gossypii:31 P.aerophilum:365

Q750R1              	100.00%		Q8ZWP0              	100.00%
Bootstrap support for Q750R1 as seed ortholog is 76%.
Bootstrap support for Q8ZWP0 as seed ortholog is 100%.

Group of orthologs #21. Best score 350 bits
Score difference with first non-orthologous sequence - A.gossypii:350 P.aerophilum:350

Q74ZJ9              	100.00%		Q8ZY71              	100.00%
Bootstrap support for Q74ZJ9 as seed ortholog is 100%.
Bootstrap support for Q8ZY71 as seed ortholog is 100%.

Group of orthologs #22. Best score 349 bits
Score difference with first non-orthologous sequence - A.gossypii:22 P.aerophilum:349

Q74ZR6              	100.00%		Q8ZXI3              	100.00%
Bootstrap support for Q74ZR6 as seed ortholog is 66%.
Alternative seed ortholog is Q75BE2 (22 bits away from this cluster)
Bootstrap support for Q8ZXI3 as seed ortholog is 100%.

Group of orthologs #23. Best score 349 bits
Score difference with first non-orthologous sequence - A.gossypii:349 P.aerophilum:349

Q75BD7              	100.00%		Q8ZVI3              	100.00%
Bootstrap support for Q75BD7 as seed ortholog is 100%.
Bootstrap support for Q8ZVI3 as seed ortholog is 100%.

Group of orthologs #24. Best score 331 bits
Score difference with first non-orthologous sequence - A.gossypii:205 P.aerophilum:331

Q759A4              	100.00%		Q8ZX20              	100.00%
Bootstrap support for Q759A4 as seed ortholog is 99%.
Bootstrap support for Q8ZX20 as seed ortholog is 100%.

Group of orthologs #25. Best score 322 bits
Score difference with first non-orthologous sequence - A.gossypii:223 P.aerophilum:322

Q758Q8              	100.00%		Q8ZTD9              	100.00%
Bootstrap support for Q758Q8 as seed ortholog is 100%.
Bootstrap support for Q8ZTD9 as seed ortholog is 100%.

Group of orthologs #26. Best score 320 bits
Score difference with first non-orthologous sequence - A.gossypii:169 P.aerophilum:320

Q75C31              	100.00%		Q8ZUJ0              	100.00%
Bootstrap support for Q75C31 as seed ortholog is 99%.
Bootstrap support for Q8ZUJ0 as seed ortholog is 100%.

Group of orthologs #27. Best score 316 bits
Score difference with first non-orthologous sequence - A.gossypii:316 P.aerophilum:316

Q75DQ3              	100.00%		Q8ZTZ0              	100.00%
Bootstrap support for Q75DQ3 as seed ortholog is 100%.
Bootstrap support for Q8ZTZ0 as seed ortholog is 100%.

Group of orthologs #28. Best score 307 bits
Score difference with first non-orthologous sequence - A.gossypii:307 P.aerophilum:307

Q753T3              	100.00%		Q8ZTQ7              	100.00%
Bootstrap support for Q753T3 as seed ortholog is 100%.
Bootstrap support for Q8ZTQ7 as seed ortholog is 100%.

Group of orthologs #29. Best score 303 bits
Score difference with first non-orthologous sequence - A.gossypii:303 P.aerophilum:214

P62514              	100.00%		Q8ZXD1              	100.00%
Bootstrap support for P62514 as seed ortholog is 100%.
Bootstrap support for Q8ZXD1 as seed ortholog is 100%.

Group of orthologs #30. Best score 301 bits
Score difference with first non-orthologous sequence - A.gossypii:301 P.aerophilum:301

Q75CS4              	100.00%		O93723              	100.00%
Bootstrap support for Q75CS4 as seed ortholog is 100%.
Bootstrap support for O93723 as seed ortholog is 100%.

Group of orthologs #31. Best score 298 bits
Score difference with first non-orthologous sequence - A.gossypii:298 P.aerophilum:298

Q75A13              	100.00%		Q8ZTU5              	100.00%
Bootstrap support for Q75A13 as seed ortholog is 100%.
Bootstrap support for Q8ZTU5 as seed ortholog is 100%.

Group of orthologs #32. Best score 294 bits
Score difference with first non-orthologous sequence - A.gossypii:205 P.aerophilum:294

Q75D48              	100.00%		Q8ZZV4              	100.00%
Bootstrap support for Q75D48 as seed ortholog is 99%.
Bootstrap support for Q8ZZV4 as seed ortholog is 100%.

Group of orthologs #33. Best score 292 bits
Score difference with first non-orthologous sequence - A.gossypii:102 P.aerophilum:292

Q75CG3              	100.00%		Q8ZV31              	100.00%
Q758W1              	47.52%		
Q755L5              	12.62%		
Bootstrap support for Q75CG3 as seed ortholog is 98%.
Bootstrap support for Q8ZV31 as seed ortholog is 100%.

Group of orthologs #34. Best score 279 bits
Score difference with first non-orthologous sequence - A.gossypii:279 P.aerophilum:279

Q75DA2              	100.00%		Q8ZUF0              	100.00%
Bootstrap support for Q75DA2 as seed ortholog is 100%.
Bootstrap support for Q8ZUF0 as seed ortholog is 100%.

Group of orthologs #35. Best score 278 bits
Score difference with first non-orthologous sequence - A.gossypii:105 P.aerophilum:158

Q757N2              	100.00%		Q8ZU29              	100.00%
Bootstrap support for Q757N2 as seed ortholog is 99%.
Bootstrap support for Q8ZU29 as seed ortholog is 99%.

Group of orthologs #36. Best score 274 bits
Score difference with first non-orthologous sequence - A.gossypii:274 P.aerophilum:128

Q75EN8              	100.00%		Q8ZT95              	100.00%
Bootstrap support for Q75EN8 as seed ortholog is 100%.
Bootstrap support for Q8ZT95 as seed ortholog is 99%.

Group of orthologs #37. Best score 273 bits
Score difference with first non-orthologous sequence - A.gossypii:273 P.aerophilum:213

Q759V7              	100.00%		Q8ZXL3              	100.00%
Bootstrap support for Q759V7 as seed ortholog is 100%.
Bootstrap support for Q8ZXL3 as seed ortholog is 100%.

Group of orthologs #38. Best score 270 bits
Score difference with first non-orthologous sequence - A.gossypii:102 P.aerophilum:227

Q750C0              	100.00%		Q8ZWD4              	100.00%
Bootstrap support for Q750C0 as seed ortholog is 98%.
Bootstrap support for Q8ZWD4 as seed ortholog is 100%.

Group of orthologs #39. Best score 262 bits
Score difference with first non-orthologous sequence - A.gossypii:262 P.aerophilum:148

Q75BP5              	100.00%		Q8ZYR9              	100.00%
Q74ZU7              	8.65%		
Bootstrap support for Q75BP5 as seed ortholog is 100%.
Bootstrap support for Q8ZYR9 as seed ortholog is 99%.

Group of orthologs #40. Best score 260 bits
Score difference with first non-orthologous sequence - A.gossypii:260 P.aerophilum:260

Q757N3              	100.00%		Q8ZVQ9              	100.00%
Bootstrap support for Q757N3 as seed ortholog is 100%.
Bootstrap support for Q8ZVQ9 as seed ortholog is 100%.

Group of orthologs #41. Best score 260 bits
Score difference with first non-orthologous sequence - A.gossypii:260 P.aerophilum:260

Q758H3              	100.00%		Q8ZVF3              	100.00%
Bootstrap support for Q758H3 as seed ortholog is 100%.
Bootstrap support for Q8ZVF3 as seed ortholog is 100%.

Group of orthologs #42. Best score 260 bits
Score difference with first non-orthologous sequence - A.gossypii:74 P.aerophilum:260

Q75DW1              	100.00%		Q8ZTP4              	100.00%
Bootstrap support for Q75DW1 as seed ortholog is 94%.
Bootstrap support for Q8ZTP4 as seed ortholog is 100%.

Group of orthologs #43. Best score 254 bits
Score difference with first non-orthologous sequence - A.gossypii:254 P.aerophilum:254

Q752D6              	100.00%		Q8ZYD8              	100.00%
Bootstrap support for Q752D6 as seed ortholog is 100%.
Bootstrap support for Q8ZYD8 as seed ortholog is 100%.

Group of orthologs #44. Best score 251 bits
Score difference with first non-orthologous sequence - A.gossypii:77 P.aerophilum:71

Q752R1              	100.00%		Q8ZUR5              	100.00%
Bootstrap support for Q752R1 as seed ortholog is 94%.
Bootstrap support for Q8ZUR5 as seed ortholog is 91%.

Group of orthologs #45. Best score 251 bits
Score difference with first non-orthologous sequence - A.gossypii:251 P.aerophilum:251

Q75DB0              	100.00%		Q8ZW10              	100.00%
Bootstrap support for Q75DB0 as seed ortholog is 100%.
Bootstrap support for Q8ZW10 as seed ortholog is 100%.

Group of orthologs #46. Best score 249 bits
Score difference with first non-orthologous sequence - A.gossypii:249 P.aerophilum:249

Q74ZH6              	100.00%		Q8ZUR9              	100.00%
Bootstrap support for Q74ZH6 as seed ortholog is 100%.
Bootstrap support for Q8ZUR9 as seed ortholog is 100%.

Group of orthologs #47. Best score 248 bits
Score difference with first non-orthologous sequence - A.gossypii:248 P.aerophilum:248

Q75EA4              	100.00%		Q8ZW54              	100.00%
Bootstrap support for Q75EA4 as seed ortholog is 100%.
Bootstrap support for Q8ZW54 as seed ortholog is 100%.

Group of orthologs #48. Best score 247 bits
Score difference with first non-orthologous sequence - A.gossypii:247 P.aerophilum:247

Q756M4              	100.00%		Q8ZU97              	100.00%
Bootstrap support for Q756M4 as seed ortholog is 100%.
Bootstrap support for Q8ZU97 as seed ortholog is 100%.

Group of orthologs #49. Best score 245 bits
Score difference with first non-orthologous sequence - A.gossypii:245 P.aerophilum:245

Q751B3              	100.00%		Q8ZU12              	100.00%
Bootstrap support for Q751B3 as seed ortholog is 100%.
Bootstrap support for Q8ZU12 as seed ortholog is 100%.

Group of orthologs #50. Best score 244 bits
Score difference with first non-orthologous sequence - A.gossypii:244 P.aerophilum:244

Q75CE3              	100.00%		Q8ZUK1              	100.00%
Bootstrap support for Q75CE3 as seed ortholog is 100%.
Bootstrap support for Q8ZUK1 as seed ortholog is 100%.

Group of orthologs #51. Best score 242 bits
Score difference with first non-orthologous sequence - A.gossypii:115 P.aerophilum:242

Q75EP5              	100.00%		Q8ZVG2              	100.00%
Bootstrap support for Q75EP5 as seed ortholog is 95%.
Bootstrap support for Q8ZVG2 as seed ortholog is 100%.

Group of orthologs #52. Best score 241 bits
Score difference with first non-orthologous sequence - A.gossypii:16 P.aerophilum:165

Q758F8              	100.00%		Q8ZYK4              	100.00%
                    	       		Q8ZWS2              	40.15%
Bootstrap support for Q758F8 as seed ortholog is 67%.
Alternative seed ortholog is Q753A2 (16 bits away from this cluster)
Bootstrap support for Q8ZYK4 as seed ortholog is 100%.

Group of orthologs #53. Best score 237 bits
Score difference with first non-orthologous sequence - A.gossypii:237 P.aerophilum:237

Q75B59              	100.00%		Q8ZW90              	100.00%
Bootstrap support for Q75B59 as seed ortholog is 100%.
Bootstrap support for Q8ZW90 as seed ortholog is 100%.

Group of orthologs #54. Best score 235 bits
Score difference with first non-orthologous sequence - A.gossypii:119 P.aerophilum:133

Q75AF7              	100.00%		Q8ZYM8              	100.00%
Bootstrap support for Q75AF7 as seed ortholog is 99%.
Bootstrap support for Q8ZYM8 as seed ortholog is 99%.

Group of orthologs #55. Best score 234 bits
Score difference with first non-orthologous sequence - A.gossypii:234 P.aerophilum:234

Q75EU2              	100.00%		Q8ZYB3              	100.00%
Bootstrap support for Q75EU2 as seed ortholog is 100%.
Bootstrap support for Q8ZYB3 as seed ortholog is 100%.

Group of orthologs #56. Best score 232 bits
Score difference with first non-orthologous sequence - A.gossypii:232 P.aerophilum:232

Q755K6              	100.00%		Q8ZVV2              	100.00%
Bootstrap support for Q755K6 as seed ortholog is 100%.
Bootstrap support for Q8ZVV2 as seed ortholog is 100%.

Group of orthologs #57. Best score 230 bits
Score difference with first non-orthologous sequence - A.gossypii:230 P.aerophilum:230

Q752N9              	100.00%		Q8ZY49              	100.00%
Bootstrap support for Q752N9 as seed ortholog is 100%.
Bootstrap support for Q8ZY49 as seed ortholog is 100%.

Group of orthologs #58. Best score 228 bits
Score difference with first non-orthologous sequence - A.gossypii:228 P.aerophilum:228

Q750W4              	100.00%		Q8ZUA4              	100.00%
Bootstrap support for Q750W4 as seed ortholog is 100%.
Bootstrap support for Q8ZUA4 as seed ortholog is 100%.

Group of orthologs #59. Best score 226 bits
Score difference with first non-orthologous sequence - A.gossypii:52 P.aerophilum:226

Q758U3              	100.00%		Q8ZV75              	100.00%
Bootstrap support for Q758U3 as seed ortholog is 89%.
Bootstrap support for Q8ZV75 as seed ortholog is 100%.

Group of orthologs #60. Best score 225 bits
Score difference with first non-orthologous sequence - A.gossypii:225 P.aerophilum:177

Q754D6              	100.00%		Q8ZVF2              	100.00%
Bootstrap support for Q754D6 as seed ortholog is 100%.
Bootstrap support for Q8ZVF2 as seed ortholog is 100%.

Group of orthologs #61. Best score 224 bits
Score difference with first non-orthologous sequence - A.gossypii:224 P.aerophilum:224

Q75DS8              	100.00%		Q8ZYN2              	100.00%
Bootstrap support for Q75DS8 as seed ortholog is 100%.
Bootstrap support for Q8ZYN2 as seed ortholog is 100%.

Group of orthologs #62. Best score 223 bits
Score difference with first non-orthologous sequence - A.gossypii:73 P.aerophilum:223

Q75AE9              	100.00%		Q8ZX30              	100.00%
Q752E7              	40.98%		
Bootstrap support for Q75AE9 as seed ortholog is 90%.
Bootstrap support for Q8ZX30 as seed ortholog is 100%.

Group of orthologs #63. Best score 223 bits
Score difference with first non-orthologous sequence - A.gossypii:141 P.aerophilum:223

Q75F08              	100.00%		Q8ZVG1              	100.00%
Bootstrap support for Q75F08 as seed ortholog is 99%.
Bootstrap support for Q8ZVG1 as seed ortholog is 100%.

Group of orthologs #64. Best score 222 bits
Score difference with first non-orthologous sequence - A.gossypii:222 P.aerophilum:163

Q753L0              	100.00%		Q8ZSN8              	100.00%
Bootstrap support for Q753L0 as seed ortholog is 100%.
Bootstrap support for Q8ZSN8 as seed ortholog is 99%.

Group of orthologs #65. Best score 222 bits
Score difference with first non-orthologous sequence - A.gossypii:222 P.aerophilum:222

Q74Z60              	100.00%		Q8ZXA8              	100.00%
Bootstrap support for Q74Z60 as seed ortholog is 100%.
Bootstrap support for Q8ZXA8 as seed ortholog is 100%.

Group of orthologs #66. Best score 221 bits
Score difference with first non-orthologous sequence - A.gossypii:221 P.aerophilum:221

Q75D13              	100.00%		Q8ZV46              	100.00%
Bootstrap support for Q75D13 as seed ortholog is 100%.
Bootstrap support for Q8ZV46 as seed ortholog is 100%.

Group of orthologs #67. Best score 216 bits
Score difference with first non-orthologous sequence - A.gossypii:216 P.aerophilum:216

Q750E0              	100.00%		Q8ZYW5              	100.00%
Bootstrap support for Q750E0 as seed ortholog is 100%.
Bootstrap support for Q8ZYW5 as seed ortholog is 100%.

Group of orthologs #68. Best score 215 bits
Score difference with first non-orthologous sequence - A.gossypii:215 P.aerophilum:215

Q752Q7              	100.00%		Q8ZX61              	100.00%
Bootstrap support for Q752Q7 as seed ortholog is 100%.
Bootstrap support for Q8ZX61 as seed ortholog is 100%.

Group of orthologs #69. Best score 215 bits
Score difference with first non-orthologous sequence - A.gossypii:215 P.aerophilum:215

Q75CQ5              	100.00%		Q8ZTN9              	100.00%
Bootstrap support for Q75CQ5 as seed ortholog is 100%.
Bootstrap support for Q8ZTN9 as seed ortholog is 100%.

Group of orthologs #70. Best score 213 bits
Score difference with first non-orthologous sequence - A.gossypii:213 P.aerophilum:152

Q75EB0              	100.00%		Q8ZUR7              	100.00%
Bootstrap support for Q75EB0 as seed ortholog is 100%.
Bootstrap support for Q8ZUR7 as seed ortholog is 100%.

Group of orthologs #71. Best score 207 bits
Score difference with first non-orthologous sequence - A.gossypii:30 P.aerophilum:207

Q74ZE0              	100.00%		Q8ZU33              	100.00%
Bootstrap support for Q74ZE0 as seed ortholog is 71%.
Alternative seed ortholog is Q753P8 (30 bits away from this cluster)
Bootstrap support for Q8ZU33 as seed ortholog is 100%.

Group of orthologs #72. Best score 205 bits
Score difference with first non-orthologous sequence - A.gossypii:124 P.aerophilum:205

Q753I4              	100.00%		Q8ZTI8              	100.00%
Q75CR3              	23.83%		
Bootstrap support for Q753I4 as seed ortholog is 100%.
Bootstrap support for Q8ZTI8 as seed ortholog is 100%.

Group of orthologs #73. Best score 205 bits
Score difference with first non-orthologous sequence - A.gossypii:16 P.aerophilum:99

Q756Z1              	100.00%		Q8ZWG5              	100.00%
Bootstrap support for Q756Z1 as seed ortholog is 62%.
Alternative seed ortholog is Q75AW1 (16 bits away from this cluster)
Bootstrap support for Q8ZWG5 as seed ortholog is 99%.

Group of orthologs #74. Best score 204 bits
Score difference with first non-orthologous sequence - A.gossypii:204 P.aerophilum:204

Q759B4              	100.00%		Q8ZSV6              	100.00%
Bootstrap support for Q759B4 as seed ortholog is 100%.
Bootstrap support for Q8ZSV6 as seed ortholog is 100%.

Group of orthologs #75. Best score 203 bits
Score difference with first non-orthologous sequence - A.gossypii:203 P.aerophilum:203

Q75DX9              	100.00%		Q8ZW41              	100.00%
Bootstrap support for Q75DX9 as seed ortholog is 100%.
Bootstrap support for Q8ZW41 as seed ortholog is 100%.

Group of orthologs #76. Best score 196 bits
Score difference with first non-orthologous sequence - A.gossypii:196 P.aerophilum:196

Q759R7              	100.00%		Q8ZW52              	100.00%
Bootstrap support for Q759R7 as seed ortholog is 100%.
Bootstrap support for Q8ZW52 as seed ortholog is 100%.

Group of orthologs #77. Best score 195 bits
Score difference with first non-orthologous sequence - A.gossypii:9 P.aerophilum:195

Q756A3              	100.00%		Q8ZUR6              	100.00%
Bootstrap support for Q756A3 as seed ortholog is 52%.
Alternative seed ortholog is Q751B0 (9 bits away from this cluster)
Bootstrap support for Q8ZUR6 as seed ortholog is 100%.

Group of orthologs #78. Best score 195 bits
Score difference with first non-orthologous sequence - A.gossypii:195 P.aerophilum:195

Q75AP7              	100.00%		Q8ZYF5              	100.00%
Bootstrap support for Q75AP7 as seed ortholog is 100%.
Bootstrap support for Q8ZYF5 as seed ortholog is 100%.

Group of orthologs #79. Best score 193 bits
Score difference with first non-orthologous sequence - A.gossypii:193 P.aerophilum:193

Q758F0              	100.00%		Q8ZYF9              	100.00%
Q75BQ6              	46.81%		
Bootstrap support for Q758F0 as seed ortholog is 100%.
Bootstrap support for Q8ZYF9 as seed ortholog is 100%.

Group of orthologs #80. Best score 192 bits
Score difference with first non-orthologous sequence - A.gossypii:192 P.aerophilum:192

Q756H2              	100.00%		Q8ZYE7              	100.00%
Bootstrap support for Q756H2 as seed ortholog is 100%.
Bootstrap support for Q8ZYE7 as seed ortholog is 100%.

Group of orthologs #81. Best score 191 bits
Score difference with first non-orthologous sequence - A.gossypii:107 P.aerophilum:191

Q758R9              	100.00%		Q8ZV67              	100.00%
Bootstrap support for Q758R9 as seed ortholog is 99%.
Bootstrap support for Q8ZV67 as seed ortholog is 100%.

Group of orthologs #82. Best score 191 bits
Score difference with first non-orthologous sequence - A.gossypii:191 P.aerophilum:191

Q75CW4              	100.00%		Q8ZTE1              	100.00%
Bootstrap support for Q75CW4 as seed ortholog is 100%.
Bootstrap support for Q8ZTE1 as seed ortholog is 100%.

Group of orthologs #83. Best score 190 bits
Score difference with first non-orthologous sequence - A.gossypii:113 P.aerophilum:58

Q75A20              	100.00%		Q8ZW39              	100.00%
                    	       		Q8ZW35              	13.60%
Bootstrap support for Q75A20 as seed ortholog is 99%.
Bootstrap support for Q8ZW39 as seed ortholog is 92%.

Group of orthologs #84. Best score 190 bits
Score difference with first non-orthologous sequence - A.gossypii:190 P.aerophilum:190

Q758Q3              	100.00%		Q8ZU26              	100.00%
Bootstrap support for Q758Q3 as seed ortholog is 100%.
Bootstrap support for Q8ZU26 as seed ortholog is 100%.

Group of orthologs #85. Best score 188 bits
Score difference with first non-orthologous sequence - A.gossypii:188 P.aerophilum:126

Q754H4              	100.00%		Q8ZW40              	100.00%
Bootstrap support for Q754H4 as seed ortholog is 100%.
Bootstrap support for Q8ZW40 as seed ortholog is 99%.

Group of orthologs #86. Best score 187 bits
Score difference with first non-orthologous sequence - A.gossypii:187 P.aerophilum:187

Q75AI4              	100.00%		Q8ZTP7              	100.00%
Q75BW6              	43.56%		
Bootstrap support for Q75AI4 as seed ortholog is 100%.
Bootstrap support for Q8ZTP7 as seed ortholog is 100%.

Group of orthologs #87. Best score 187 bits
Score difference with first non-orthologous sequence - A.gossypii:187 P.aerophilum:187

Q75AC3              	100.00%		Q8ZYG3              	100.00%
Q754X6              	14.59%		
Bootstrap support for Q75AC3 as seed ortholog is 100%.
Bootstrap support for Q8ZYG3 as seed ortholog is 100%.

Group of orthologs #88. Best score 186 bits
Score difference with first non-orthologous sequence - A.gossypii:186 P.aerophilum:186

Q75EA0              	100.00%		Q8ZXN9              	100.00%
Bootstrap support for Q75EA0 as seed ortholog is 100%.
Bootstrap support for Q8ZXN9 as seed ortholog is 100%.

Group of orthologs #89. Best score 185 bits
Score difference with first non-orthologous sequence - A.gossypii:185 P.aerophilum:185

Q752H7              	100.00%		Q8ZT51              	100.00%
Q752G3              	11.78%		
Bootstrap support for Q752H7 as seed ortholog is 100%.
Bootstrap support for Q8ZT51 as seed ortholog is 100%.

Group of orthologs #90. Best score 185 bits
Score difference with first non-orthologous sequence - A.gossypii:185 P.aerophilum:185

Q75D52              	100.00%		Q8ZYK5              	100.00%
Bootstrap support for Q75D52 as seed ortholog is 100%.
Bootstrap support for Q8ZYK5 as seed ortholog is 100%.

Group of orthologs #91. Best score 184 bits
Score difference with first non-orthologous sequence - A.gossypii:12 P.aerophilum:184

Q75ER7              	100.00%		Q8ZVM1              	100.00%
Bootstrap support for Q75ER7 as seed ortholog is 64%.
Alternative seed ortholog is Q753J4 (12 bits away from this cluster)
Bootstrap support for Q8ZVM1 as seed ortholog is 100%.

Group of orthologs #92. Best score 182 bits
Score difference with first non-orthologous sequence - A.gossypii:182 P.aerophilum:182

Q75CF2              	100.00%		Q8ZTC7              	100.00%
Bootstrap support for Q75CF2 as seed ortholog is 100%.
Bootstrap support for Q8ZTC7 as seed ortholog is 100%.

Group of orthologs #93. Best score 180 bits
Score difference with first non-orthologous sequence - A.gossypii:33 P.aerophilum:180

Q756E4              	100.00%		Q8ZXH3              	100.00%
                    	       		Q8ZW06              	5.09%
Bootstrap support for Q756E4 as seed ortholog is 78%.
Bootstrap support for Q8ZXH3 as seed ortholog is 100%.

Group of orthologs #94. Best score 180 bits
Score difference with first non-orthologous sequence - A.gossypii:118 P.aerophilum:71

Q75EA9              	100.00%		Q8ZXA2              	100.00%
Bootstrap support for Q75EA9 as seed ortholog is 98%.
Bootstrap support for Q8ZXA2 as seed ortholog is 93%.

Group of orthologs #95. Best score 179 bits
Score difference with first non-orthologous sequence - A.gossypii:108 P.aerophilum:179

Q75EI1              	100.00%		Q8ZYJ8              	100.00%
Bootstrap support for Q75EI1 as seed ortholog is 99%.
Bootstrap support for Q8ZYJ8 as seed ortholog is 100%.

Group of orthologs #96. Best score 178 bits
Score difference with first non-orthologous sequence - A.gossypii:84 P.aerophilum:178

Q75BN9              	100.00%		Q8ZVF0              	100.00%
Bootstrap support for Q75BN9 as seed ortholog is 99%.
Bootstrap support for Q8ZVF0 as seed ortholog is 100%.

Group of orthologs #97. Best score 175 bits
Score difference with first non-orthologous sequence - A.gossypii:175 P.aerophilum:175

Q74ZC0              	100.00%		Q8ZYD9              	100.00%
Bootstrap support for Q74ZC0 as seed ortholog is 100%.
Bootstrap support for Q8ZYD9 as seed ortholog is 100%.

Group of orthologs #98. Best score 173 bits
Score difference with first non-orthologous sequence - A.gossypii:173 P.aerophilum:173

Q75CM8              	100.00%		Q8ZUK0              	100.00%
                    	       		Q8ZWL7              	9.30%
Bootstrap support for Q75CM8 as seed ortholog is 100%.
Bootstrap support for Q8ZUK0 as seed ortholog is 100%.

Group of orthologs #99. Best score 173 bits
Score difference with first non-orthologous sequence - A.gossypii:173 P.aerophilum:173

Q75D37              	100.00%		Q8ZT69              	100.00%
Bootstrap support for Q75D37 as seed ortholog is 100%.
Bootstrap support for Q8ZT69 as seed ortholog is 100%.

Group of orthologs #100. Best score 171 bits
Score difference with first non-orthologous sequence - A.gossypii:107 P.aerophilum:3

Q75AY4              	100.00%		Q8ZWR8              	100.00%
Bootstrap support for Q75AY4 as seed ortholog is 99%.
Bootstrap support for Q8ZWR8 as seed ortholog is 54%.
Alternative seed ortholog is Q8ZW34 (3 bits away from this cluster)

Group of orthologs #101. Best score 171 bits
Score difference with first non-orthologous sequence - A.gossypii:171 P.aerophilum:171

Q75E89              	100.00%		Q8ZW51              	100.00%
Bootstrap support for Q75E89 as seed ortholog is 100%.
Bootstrap support for Q8ZW51 as seed ortholog is 100%.

Group of orthologs #102. Best score 170 bits
Score difference with first non-orthologous sequence - A.gossypii:170 P.aerophilum:170

Q757Q0              	100.00%		Q8ZWK6              	100.00%
Bootstrap support for Q757Q0 as seed ortholog is 100%.
Bootstrap support for Q8ZWK6 as seed ortholog is 100%.

Group of orthologs #103. Best score 168 bits
Score difference with first non-orthologous sequence - A.gossypii:168 P.aerophilum:168

Q75EH1              	100.00%		Q8ZYQ4              	100.00%
Bootstrap support for Q75EH1 as seed ortholog is 100%.
Bootstrap support for Q8ZYQ4 as seed ortholog is 100%.

Group of orthologs #104. Best score 167 bits
Score difference with first non-orthologous sequence - A.gossypii:167 P.aerophilum:167

Q74ZK6              	100.00%		Q8ZSQ9              	100.00%
Bootstrap support for Q74ZK6 as seed ortholog is 100%.
Bootstrap support for Q8ZSQ9 as seed ortholog is 100%.

Group of orthologs #105. Best score 166 bits
Score difference with first non-orthologous sequence - A.gossypii:166 P.aerophilum:166

Q759A9              	100.00%		Q8ZYE0              	100.00%
Bootstrap support for Q759A9 as seed ortholog is 100%.
Bootstrap support for Q8ZYE0 as seed ortholog is 100%.

Group of orthologs #106. Best score 165 bits
Score difference with first non-orthologous sequence - A.gossypii:165 P.aerophilum:165

Q754W3              	100.00%		Q8ZY16              	100.00%
Bootstrap support for Q754W3 as seed ortholog is 100%.
Bootstrap support for Q8ZY16 as seed ortholog is 100%.

Group of orthologs #107. Best score 155 bits
Score difference with first non-orthologous sequence - A.gossypii:155 P.aerophilum:36

Q750K5              	100.00%		Q8ZYL5              	100.00%
Bootstrap support for Q750K5 as seed ortholog is 100%.
Bootstrap support for Q8ZYL5 as seed ortholog is 81%.

Group of orthologs #108. Best score 151 bits
Score difference with first non-orthologous sequence - A.gossypii:77 P.aerophilum:26

Q752H4              	100.00%		Q8ZSW5              	100.00%
Bootstrap support for Q752H4 as seed ortholog is 99%.
Bootstrap support for Q8ZSW5 as seed ortholog is 75%.

Group of orthologs #109. Best score 151 bits
Score difference with first non-orthologous sequence - A.gossypii:106 P.aerophilum:151

Q757I5              	100.00%		Q8ZU81              	100.00%
Bootstrap support for Q757I5 as seed ortholog is 99%.
Bootstrap support for Q8ZU81 as seed ortholog is 100%.

Group of orthologs #110. Best score 150 bits
Score difference with first non-orthologous sequence - A.gossypii:150 P.aerophilum:150

Q75CI4              	100.00%		Q8ZYL9              	100.00%
Bootstrap support for Q75CI4 as seed ortholog is 100%.
Bootstrap support for Q8ZYL9 as seed ortholog is 100%.

Group of orthologs #111. Best score 149 bits
Score difference with first non-orthologous sequence - A.gossypii:149 P.aerophilum:149

Q759W2              	100.00%		O93724              	100.00%
Bootstrap support for Q759W2 as seed ortholog is 100%.
Bootstrap support for O93724 as seed ortholog is 100%.

Group of orthologs #112. Best score 148 bits
Score difference with first non-orthologous sequence - A.gossypii:148 P.aerophilum:148

Q757L9              	100.00%		Q8ZU95              	100.00%
Bootstrap support for Q757L9 as seed ortholog is 100%.
Bootstrap support for Q8ZU95 as seed ortholog is 100%.

Group of orthologs #113. Best score 148 bits
Score difference with first non-orthologous sequence - A.gossypii:148 P.aerophilum:148

Q75E56              	100.00%		Q8ZY26              	100.00%
Bootstrap support for Q75E56 as seed ortholog is 100%.
Bootstrap support for Q8ZY26 as seed ortholog is 100%.

Group of orthologs #114. Best score 147 bits
Score difference with first non-orthologous sequence - A.gossypii:58 P.aerophilum:98

Q74Z38              	100.00%		Q8ZVW7              	100.00%
Q75CW3              	11.76%		
Bootstrap support for Q74Z38 as seed ortholog is 98%.
Bootstrap support for Q8ZVW7 as seed ortholog is 99%.

Group of orthologs #115. Best score 147 bits
Score difference with first non-orthologous sequence - A.gossypii:147 P.aerophilum:147

Q758N0              	100.00%		Q8ZWY9              	100.00%
Bootstrap support for Q758N0 as seed ortholog is 100%.
Bootstrap support for Q8ZWY9 as seed ortholog is 100%.

Group of orthologs #116. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:74 P.aerophilum:46

Q757I1              	100.00%		Q8ZW83              	100.00%
Q75EJ5              	88.79%		
Q75DQ0              	65.84%		
Bootstrap support for Q757I1 as seed ortholog is 98%.
Bootstrap support for Q8ZW83 as seed ortholog is 87%.

Group of orthologs #117. Best score 146 bits
Score difference with first non-orthologous sequence - A.gossypii:146 P.aerophilum:53

Q751N1              	100.00%		Q8ZZJ6              	100.00%
Bootstrap support for Q751N1 as seed ortholog is 100%.
Bootstrap support for Q8ZZJ6 as seed ortholog is 86%.

Group of orthologs #118. Best score 145 bits
Score difference with first non-orthologous sequence - A.gossypii:145 P.aerophilum:145

Q752A0              	100.00%		Q8ZXX8              	100.00%
Bootstrap support for Q752A0 as seed ortholog is 100%.
Bootstrap support for Q8ZXX8 as seed ortholog is 100%.

Group of orthologs #119. Best score 145 bits
Score difference with first non-orthologous sequence - A.gossypii:145 P.aerophilum:145

Q753S2              	100.00%		Q8ZZK4              	100.00%
Bootstrap support for Q753S2 as seed ortholog is 100%.
Bootstrap support for Q8ZZK4 as seed ortholog is 100%.

Group of orthologs #120. Best score 145 bits
Score difference with first non-orthologous sequence - A.gossypii:145 P.aerophilum:145

Q75EW4              	100.00%		Q8ZT09              	100.00%
Bootstrap support for Q75EW4 as seed ortholog is 100%.
Bootstrap support for Q8ZT09 as seed ortholog is 100%.

Group of orthologs #121. Best score 144 bits
Score difference with first non-orthologous sequence - A.gossypii:144 P.aerophilum:144

Q755M0              	100.00%		Q8ZTA8              	100.00%
Bootstrap support for Q755M0 as seed ortholog is 100%.
Bootstrap support for Q8ZTA8 as seed ortholog is 100%.

Group of orthologs #122. Best score 144 bits
Score difference with first non-orthologous sequence - A.gossypii:144 P.aerophilum:144

Q758E0              	100.00%		Q8ZTM9              	100.00%
Bootstrap support for Q758E0 as seed ortholog is 100%.
Bootstrap support for Q8ZTM9 as seed ortholog is 100%.

Group of orthologs #123. Best score 144 bits
Score difference with first non-orthologous sequence - A.gossypii:144 P.aerophilum:144

Q75AK8              	100.00%		Q8ZY36              	100.00%
Bootstrap support for Q75AK8 as seed ortholog is 100%.
Bootstrap support for Q8ZY36 as seed ortholog is 100%.

Group of orthologs #124. Best score 144 bits
Score difference with first non-orthologous sequence - A.gossypii:144 P.aerophilum:144

Q75BT4              	100.00%		Q8ZWZ1              	100.00%
Bootstrap support for Q75BT4 as seed ortholog is 100%.
Bootstrap support for Q8ZWZ1 as seed ortholog is 100%.

Group of orthologs #125. Best score 141 bits
Score difference with first non-orthologous sequence - A.gossypii:141 P.aerophilum:141

Q75BQ2              	100.00%		Q8ZWQ7              	100.00%
Bootstrap support for Q75BQ2 as seed ortholog is 100%.
Bootstrap support for Q8ZWQ7 as seed ortholog is 100%.

Group of orthologs #126. Best score 140 bits
Score difference with first non-orthologous sequence - A.gossypii:140 P.aerophilum:140

Q74ZR4              	100.00%		Q8ZVR0              	100.00%
Bootstrap support for Q74ZR4 as seed ortholog is 100%.
Bootstrap support for Q8ZVR0 as seed ortholog is 100%.

Group of orthologs #127. Best score 140 bits
Score difference with first non-orthologous sequence - A.gossypii:140 P.aerophilum:140

Q753P1              	100.00%		Q8ZTS7              	100.00%
Bootstrap support for Q753P1 as seed ortholog is 100%.
Bootstrap support for Q8ZTS7 as seed ortholog is 100%.

Group of orthologs #128. Best score 140 bits
Score difference with first non-orthologous sequence - A.gossypii:140 P.aerophilum:84

Q755T1              	100.00%		Q8ZVG4              	100.00%
Bootstrap support for Q755T1 as seed ortholog is 100%.
Bootstrap support for Q8ZVG4 as seed ortholog is 99%.

Group of orthologs #129. Best score 139 bits
Score difference with first non-orthologous sequence - A.gossypii:139 P.aerophilum:139

Q752T2              	100.00%		Q8ZTY7              	100.00%
Bootstrap support for Q752T2 as seed ortholog is 100%.
Bootstrap support for Q8ZTY7 as seed ortholog is 100%.

Group of orthologs #130. Best score 139 bits
Score difference with first non-orthologous sequence - A.gossypii:139 P.aerophilum:139

Q75CQ9              	100.00%		Q8ZYE2              	100.00%
Bootstrap support for Q75CQ9 as seed ortholog is 100%.
Bootstrap support for Q8ZYE2 as seed ortholog is 100%.

Group of orthologs #131. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:138 P.aerophilum:138

Q75BA7              	100.00%		Q8ZXM4              	100.00%
Bootstrap support for Q75BA7 as seed ortholog is 100%.
Bootstrap support for Q8ZXM4 as seed ortholog is 100%.

Group of orthologs #132. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:49 P.aerophilum:136

Q752M6              	100.00%		Q8ZVF1              	100.00%
Q74ZN1              	36.41%		
Bootstrap support for Q752M6 as seed ortholog is 84%.
Bootstrap support for Q8ZVF1 as seed ortholog is 100%.

Group of orthologs #133. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:136 P.aerophilum:136

Q75CY7              	100.00%		Q8ZSV4              	100.00%
Bootstrap support for Q75CY7 as seed ortholog is 100%.
Bootstrap support for Q8ZSV4 as seed ortholog is 100%.

Group of orthologs #134. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 P.aerophilum:134

Q758S7              	100.00%		Q8ZSU7              	100.00%
Bootstrap support for Q758S7 as seed ortholog is 100%.
Bootstrap support for Q8ZSU7 as seed ortholog is 100%.

Group of orthologs #135. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 P.aerophilum:134

Q752K1              	100.00%		Q8ZZJ7              	100.00%
Bootstrap support for Q752K1 as seed ortholog is 100%.
Bootstrap support for Q8ZZJ7 as seed ortholog is 100%.

Group of orthologs #136. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 P.aerophilum:133

Q75F62              	100.00%		Q8ZWS0              	100.00%
Q759A5              	41.67%		
Bootstrap support for Q75F62 as seed ortholog is 100%.
Bootstrap support for Q8ZWS0 as seed ortholog is 100%.

Group of orthologs #137. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:37 P.aerophilum:133

Q75AY6              	100.00%		Q8ZU23              	100.00%
Bootstrap support for Q75AY6 as seed ortholog is 81%.
Bootstrap support for Q8ZU23 as seed ortholog is 100%.

Group of orthologs #138. Best score 133 bits
Score difference with first non-orthologous sequence - A.gossypii:133 P.aerophilum:133

Q75DM3              	100.00%		Q8ZY28              	100.00%
Bootstrap support for Q75DM3 as seed ortholog is 100%.
Bootstrap support for Q8ZY28 as seed ortholog is 100%.

Group of orthologs #139. Best score 132 bits
Score difference with first non-orthologous sequence - A.gossypii:132 P.aerophilum:132

Q75BR1              	100.00%		Q8ZZJ2              	100.00%
Bootstrap support for Q75BR1 as seed ortholog is 100%.
Bootstrap support for Q8ZZJ2 as seed ortholog is 100%.

Group of orthologs #140. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:131 P.aerophilum:131

O94198              	100.00%		Q8ZWB6              	100.00%
Q750K8              	26.07%		Q8ZWM5              	5.90%
Bootstrap support for O94198 as seed ortholog is 100%.
Bootstrap support for Q8ZWB6 as seed ortholog is 100%.

Group of orthologs #141. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:27 P.aerophilum:57

Q75CR7              	100.00%		Q8ZU64              	100.00%
Bootstrap support for Q75CR7 as seed ortholog is 71%.
Alternative seed ortholog is Q75CZ3 (27 bits away from this cluster)
Bootstrap support for Q8ZU64 as seed ortholog is 91%.

Group of orthologs #142. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:129 P.aerophilum:129

Q750F2              	100.00%		Q8ZWM4              	100.00%
Bootstrap support for Q750F2 as seed ortholog is 100%.
Bootstrap support for Q8ZWM4 as seed ortholog is 100%.

Group of orthologs #143. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:129 P.aerophilum:129

Q751I9              	100.00%		Q8ZVU8              	100.00%
Bootstrap support for Q751I9 as seed ortholog is 100%.
Bootstrap support for Q8ZVU8 as seed ortholog is 100%.

Group of orthologs #144. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 P.aerophilum:126

Q74ZF6              	100.00%		Q8ZUU0              	100.00%
Bootstrap support for Q74ZF6 as seed ortholog is 100%.
Bootstrap support for Q8ZUU0 as seed ortholog is 100%.

Group of orthologs #145. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 P.aerophilum:126

Q752J5              	100.00%		Q8ZVW0              	100.00%
Bootstrap support for Q752J5 as seed ortholog is 100%.
Bootstrap support for Q8ZVW0 as seed ortholog is 100%.

Group of orthologs #146. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 P.aerophilum:126

Q756L5              	100.00%		Q8ZV45              	100.00%
Bootstrap support for Q756L5 as seed ortholog is 100%.
Bootstrap support for Q8ZV45 as seed ortholog is 100%.

Group of orthologs #147. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 P.aerophilum:126

Q75DY0              	100.00%		Q8ZYW7              	100.00%
Bootstrap support for Q75DY0 as seed ortholog is 100%.
Bootstrap support for Q8ZYW7 as seed ortholog is 100%.

Group of orthologs #148. Best score 125 bits
Score difference with first non-orthologous sequence - A.gossypii:125 P.aerophilum:125

Q75F76              	100.00%		Q8ZYT7              	100.00%
                    	       		Q8ZW77              	8.55%
Bootstrap support for Q75F76 as seed ortholog is 100%.
Bootstrap support for Q8ZYT7 as seed ortholog is 100%.

Group of orthologs #149. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:21 P.aerophilum:124

Q75AB0              	100.00%		Q8ZYI4              	100.00%
Bootstrap support for Q75AB0 as seed ortholog is 69%.
Alternative seed ortholog is Q754V9 (21 bits away from this cluster)
Bootstrap support for Q8ZYI4 as seed ortholog is 100%.

Group of orthologs #150. Best score 123 bits
Score difference with first non-orthologous sequence - A.gossypii:123 P.aerophilum:123

Q750I1              	100.00%		Q8ZT11              	100.00%
Bootstrap support for Q750I1 as seed ortholog is 100%.
Bootstrap support for Q8ZT11 as seed ortholog is 100%.

Group of orthologs #151. Best score 123 bits
Score difference with first non-orthologous sequence - A.gossypii:123 P.aerophilum:123

Q756M8              	100.00%		Q8ZUZ4              	100.00%
Bootstrap support for Q756M8 as seed ortholog is 100%.
Bootstrap support for Q8ZUZ4 as seed ortholog is 100%.

Group of orthologs #152. Best score 123 bits
Score difference with first non-orthologous sequence - A.gossypii:53 P.aerophilum:123

Q75DM1              	100.00%		Q8ZT00              	100.00%
Bootstrap support for Q75DM1 as seed ortholog is 87%.
Bootstrap support for Q8ZT00 as seed ortholog is 100%.

Group of orthologs #153. Best score 122 bits
Score difference with first non-orthologous sequence - A.gossypii:122 P.aerophilum:122

Q755W7              	100.00%		Q8ZTH7              	100.00%
Q75CM6              	9.49%		Q8ZYV2              	28.47%
                    	       		Q8ZU65              	13.66%
                    	       		Q8ZXA1              	5.09%
Bootstrap support for Q755W7 as seed ortholog is 100%.
Bootstrap support for Q8ZTH7 as seed ortholog is 100%.

Group of orthologs #154. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:63 P.aerophilum:119

Q751J4              	100.00%		Q8ZTR0              	100.00%
Bootstrap support for Q751J4 as seed ortholog is 99%.
Bootstrap support for Q8ZTR0 as seed ortholog is 100%.

Group of orthologs #155. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 P.aerophilum:119

Q75C90              	100.00%		Q8ZTJ4              	100.00%
Bootstrap support for Q75C90 as seed ortholog is 100%.
Bootstrap support for Q8ZTJ4 as seed ortholog is 100%.

Group of orthologs #156. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 P.aerophilum:119

Q75DA1              	100.00%		Q8ZUE9              	100.00%
Bootstrap support for Q75DA1 as seed ortholog is 100%.
Bootstrap support for Q8ZUE9 as seed ortholog is 100%.

Group of orthologs #157. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:118 P.aerophilum:118

Q75B47              	100.00%		Q8ZY15              	100.00%
Bootstrap support for Q75B47 as seed ortholog is 100%.
Bootstrap support for Q8ZY15 as seed ortholog is 100%.

Group of orthologs #158. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:116 P.aerophilum:116

Q758U5              	100.00%		Q8ZWL4              	100.00%
Bootstrap support for Q758U5 as seed ortholog is 100%.
Bootstrap support for Q8ZWL4 as seed ortholog is 100%.

Group of orthologs #159. Best score 115 bits
Score difference with first non-orthologous sequence - A.gossypii:115 P.aerophilum:115

Q74ZU5              	100.00%		Q8ZUR8              	100.00%
Bootstrap support for Q74ZU5 as seed ortholog is 100%.
Bootstrap support for Q8ZUR8 as seed ortholog is 100%.

Group of orthologs #160. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:114 P.aerophilum:114

Q75C13              	100.00%		Q8ZVV7              	100.00%
Bootstrap support for Q75C13 as seed ortholog is 100%.
Bootstrap support for Q8ZVV7 as seed ortholog is 100%.

Group of orthologs #161. Best score 113 bits
Score difference with first non-orthologous sequence - A.gossypii:113 P.aerophilum:113

Q757A8              	100.00%		Q8ZWK4              	100.00%
Q75CF8              	32.32%		
Bootstrap support for Q757A8 as seed ortholog is 100%.
Bootstrap support for Q8ZWK4 as seed ortholog is 100%.

Group of orthologs #162. Best score 113 bits
Score difference with first non-orthologous sequence - A.gossypii:113 P.aerophilum:113

Q75AE7              	100.00%		Q8ZTU1              	100.00%
Bootstrap support for Q75AE7 as seed ortholog is 100%.
Bootstrap support for Q8ZTU1 as seed ortholog is 100%.

Group of orthologs #163. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 P.aerophilum:111

Q75A21              	100.00%		Q8ZW26              	100.00%
Q756Q2              	40.03%		
Q74ZR2              	35.83%		
Q756X4              	33.80%		
Q754A6              	26.79%		
Bootstrap support for Q75A21 as seed ortholog is 100%.
Bootstrap support for Q8ZW26 as seed ortholog is 100%.

Group of orthologs #164. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 P.aerophilum:111

Q753V8              	100.00%		Q8ZWD8              	100.00%
Bootstrap support for Q753V8 as seed ortholog is 100%.
Bootstrap support for Q8ZWD8 as seed ortholog is 100%.

Group of orthologs #165. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 P.aerophilum:111

Q75AB1              	100.00%		Q8ZWS3              	100.00%
Bootstrap support for Q75AB1 as seed ortholog is 100%.
Bootstrap support for Q8ZWS3 as seed ortholog is 100%.

Group of orthologs #166. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 P.aerophilum:57

Q75E36              	100.00%		Q8ZYP5              	100.00%
Bootstrap support for Q75E36 as seed ortholog is 100%.
Bootstrap support for Q8ZYP5 as seed ortholog is 96%.

Group of orthologs #167. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 P.aerophilum:109

Q75BG3              	100.00%		Q8ZTD3              	100.00%
Bootstrap support for Q75BG3 as seed ortholog is 100%.
Bootstrap support for Q8ZTD3 as seed ortholog is 100%.

Group of orthologs #168. Best score 107 bits
Score difference with first non-orthologous sequence - A.gossypii:107 P.aerophilum:107

Q754M4              	100.00%		Q8ZVI7              	100.00%
Bootstrap support for Q754M4 as seed ortholog is 100%.
Bootstrap support for Q8ZVI7 as seed ortholog is 100%.

Group of orthologs #169. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:61 P.aerophilum:106

Q756F0              	100.00%		Q8ZTV0              	100.00%
Bootstrap support for Q756F0 as seed ortholog is 99%.
Bootstrap support for Q8ZTV0 as seed ortholog is 100%.

Group of orthologs #170. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:106 P.aerophilum:106

Q75BY4              	100.00%		Q8ZTR2              	100.00%
Bootstrap support for Q75BY4 as seed ortholog is 100%.
Bootstrap support for Q8ZTR2 as seed ortholog is 100%.

Group of orthologs #171. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:106 P.aerophilum:106

Q758Z0              	100.00%		Q8ZYL2              	100.00%
Bootstrap support for Q758Z0 as seed ortholog is 100%.
Bootstrap support for Q8ZYL2 as seed ortholog is 100%.

Group of orthologs #172. Best score 105 bits
Score difference with first non-orthologous sequence - A.gossypii:55 P.aerophilum:105

Q75C81              	100.00%		Q8ZVM9              	100.00%
Bootstrap support for Q75C81 as seed ortholog is 98%.
Bootstrap support for Q8ZVM9 as seed ortholog is 100%.

Group of orthologs #173. Best score 105 bits
Score difference with first non-orthologous sequence - A.gossypii:105 P.aerophilum:105

Q75D95              	100.00%		Q8ZUM0              	100.00%
Bootstrap support for Q75D95 as seed ortholog is 100%.
Bootstrap support for Q8ZUM0 as seed ortholog is 100%.

Group of orthologs #174. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:104 P.aerophilum:104

Q757K9              	100.00%		Q8ZU54              	100.00%
Q75DN9              	14.19%		
Bootstrap support for Q757K9 as seed ortholog is 100%.
Bootstrap support for Q8ZU54 as seed ortholog is 100%.

Group of orthologs #175. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:26 P.aerophilum:104

Q750H1              	100.00%		Q8ZU41              	100.00%
Bootstrap support for Q750H1 as seed ortholog is 73%.
Alternative seed ortholog is Q758J1 (26 bits away from this cluster)
Bootstrap support for Q8ZU41 as seed ortholog is 100%.

Group of orthologs #176. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:104 P.aerophilum:104

Q74Z71              	100.00%		Q8ZWW5              	100.00%
Bootstrap support for Q74Z71 as seed ortholog is 100%.
Bootstrap support for Q8ZWW5 as seed ortholog is 100%.

Group of orthologs #177. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:104 P.aerophilum:104

Q74ZY3              	100.00%		Q8ZWT5              	100.00%
Bootstrap support for Q74ZY3 as seed ortholog is 100%.
Bootstrap support for Q8ZWT5 as seed ortholog is 100%.

Group of orthologs #178. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:104 P.aerophilum:104

Q759J2              	100.00%		Q8ZX71              	100.00%
Bootstrap support for Q759J2 as seed ortholog is 100%.
Bootstrap support for Q8ZX71 as seed ortholog is 100%.

Group of orthologs #179. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:6 P.aerophilum:102

Q753Q6              	100.00%		Q8ZTB6              	100.00%
Bootstrap support for Q753Q6 as seed ortholog is 57%.
Alternative seed ortholog is Q75F45 (6 bits away from this cluster)
Bootstrap support for Q8ZTB6 as seed ortholog is 100%.

Group of orthologs #180. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:40 P.aerophilum:102

Q758L6              	100.00%		Q8ZTV1              	100.00%
Bootstrap support for Q758L6 as seed ortholog is 95%.
Bootstrap support for Q8ZTV1 as seed ortholog is 100%.

Group of orthologs #181. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:101 P.aerophilum:101

Q74Z35              	100.00%		Q8ZU24              	100.00%
Q751A4              	58.35%		
Q759G2              	35.12%		
Bootstrap support for Q74Z35 as seed ortholog is 100%.
Bootstrap support for Q8ZU24 as seed ortholog is 100%.

Group of orthologs #182. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:44 P.aerophilum:101

Q74ZY2              	100.00%		Q8ZT99              	100.00%
Q75DQ7              	5.84%		
Bootstrap support for Q74ZY2 as seed ortholog is 86%.
Bootstrap support for Q8ZT99 as seed ortholog is 100%.

Group of orthologs #183. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:101 P.aerophilum:101

Q751X2              	100.00%		Q8ZY17              	100.00%
Bootstrap support for Q751X2 as seed ortholog is 100%.
Bootstrap support for Q8ZY17 as seed ortholog is 100%.

Group of orthologs #184. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:101 P.aerophilum:101

Q75AK4              	100.00%		Q8ZU06              	100.00%
Bootstrap support for Q75AK4 as seed ortholog is 100%.
Bootstrap support for Q8ZU06 as seed ortholog is 100%.

Group of orthologs #185. Best score 101 bits
Score difference with first non-orthologous sequence - A.gossypii:101 P.aerophilum:101

Q759L8              	100.00%		Q8ZYQ0              	100.00%
Bootstrap support for Q759L8 as seed ortholog is 100%.
Bootstrap support for Q8ZYQ0 as seed ortholog is 100%.

Group of orthologs #186. Best score 100 bits
Score difference with first non-orthologous sequence - A.gossypii:11 P.aerophilum:100

Q758C2              	100.00%		Q8ZVJ5              	100.00%
Bootstrap support for Q758C2 as seed ortholog is 56%.
Alternative seed ortholog is Q74ZX3 (11 bits away from this cluster)
Bootstrap support for Q8ZVJ5 as seed ortholog is 100%.

Group of orthologs #187. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:5 P.aerophilum:99

Q758S8              	100.00%		Q8ZYF2              	100.00%
Bootstrap support for Q758S8 as seed ortholog is 55%.
Alternative seed ortholog is Q75F88 (5 bits away from this cluster)
Bootstrap support for Q8ZYF2 as seed ortholog is 100%.

Group of orthologs #188. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 P.aerophilum:99

Q75B05              	100.00%		Q8ZYQ3              	100.00%
Bootstrap support for Q75B05 as seed ortholog is 100%.
Bootstrap support for Q8ZYQ3 as seed ortholog is 100%.

Group of orthologs #189. Best score 98 bits
Score difference with first non-orthologous sequence - A.gossypii:98 P.aerophilum:98

Q75DD1              	100.00%		Q8ZWY4              	100.00%
Bootstrap support for Q75DD1 as seed ortholog is 100%.
Bootstrap support for Q8ZWY4 as seed ortholog is 100%.

Group of orthologs #190. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:14 P.aerophilum:97

Q751M1              	100.00%		Q8ZST5              	100.00%
Bootstrap support for Q751M1 as seed ortholog is 71%.
Alternative seed ortholog is Q75EG2 (14 bits away from this cluster)
Bootstrap support for Q8ZST5 as seed ortholog is 100%.

Group of orthologs #191. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:26 P.aerophilum:96

Q756K6              	100.00%		Q8ZXW7              	100.00%
Bootstrap support for Q756K6 as seed ortholog is 79%.
Bootstrap support for Q8ZXW7 as seed ortholog is 100%.

Group of orthologs #192. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:95 P.aerophilum:95

Q75ES5              	100.00%		Q8ZWP2              	100.00%
Q750F3              	33.72%		Q8ZSU1              	14.52%
Bootstrap support for Q75ES5 as seed ortholog is 100%.
Bootstrap support for Q8ZWP2 as seed ortholog is 100%.

Group of orthologs #193. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:95 P.aerophilum:95

Q75CV6              	100.00%		Q8ZVX6              	100.00%
Bootstrap support for Q75CV6 as seed ortholog is 100%.
Bootstrap support for Q8ZVX6 as seed ortholog is 100%.

Group of orthologs #194. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:95 P.aerophilum:95

Q75CJ6              	100.00%		Q8ZXY8              	100.00%
Bootstrap support for Q75CJ6 as seed ortholog is 100%.
Bootstrap support for Q8ZXY8 as seed ortholog is 100%.

Group of orthologs #195. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 P.aerophilum:94

Q752F0              	100.00%		Q7LX31              	100.00%
Bootstrap support for Q752F0 as seed ortholog is 100%.
Bootstrap support for Q7LX31 as seed ortholog is 100%.

Group of orthologs #196. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 P.aerophilum:94

Q75CU7              	100.00%		Q8ZTT3              	100.00%
Bootstrap support for Q75CU7 as seed ortholog is 100%.
Bootstrap support for Q8ZTT3 as seed ortholog is 100%.

Group of orthologs #197. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 P.aerophilum:92

Q750R5              	100.00%		Q8ZYG2              	100.00%
Bootstrap support for Q750R5 as seed ortholog is 100%.
Bootstrap support for Q8ZYG2 as seed ortholog is 100%.

Group of orthologs #198. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 P.aerophilum:92

Q75CC4              	100.00%		Q8ZST4              	100.00%
Bootstrap support for Q75CC4 as seed ortholog is 100%.
Bootstrap support for Q8ZST4 as seed ortholog is 100%.

Group of orthologs #199. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:3 P.aerophilum:91

Q75CX6              	100.00%		Q8ZVW5              	100.00%
Q75DB2              	66.06%		
Q75CX5              	63.45%		
Q75DB1              	60.57%		
Q75BV0              	34.20%		
Bootstrap support for Q75CX6 as seed ortholog is 56%.
Alternative seed ortholog is Q75E33 (3 bits away from this cluster)
Bootstrap support for Q8ZVW5 as seed ortholog is 100%.

Group of orthologs #200. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 P.aerophilum:91

Q754M0              	100.00%		Q8ZWV9              	100.00%
Bootstrap support for Q754M0 as seed ortholog is 100%.
Bootstrap support for Q8ZWV9 as seed ortholog is 100%.

Group of orthologs #201. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 P.aerophilum:91

Q75B31              	100.00%		Q8ZSU5              	100.00%
Bootstrap support for Q75B31 as seed ortholog is 100%.
Bootstrap support for Q8ZSU5 as seed ortholog is 100%.

Group of orthologs #202. Best score 90 bits
Score difference with first non-orthologous sequence - A.gossypii:90 P.aerophilum:90

Q756Y3              	100.00%		Q8ZT21              	100.00%
Bootstrap support for Q756Y3 as seed ortholog is 100%.
Bootstrap support for Q8ZT21 as seed ortholog is 100%.

Group of orthologs #203. Best score 90 bits
Score difference with first non-orthologous sequence - A.gossypii:90 P.aerophilum:90

Q75B62              	100.00%		Q8ZVA7              	100.00%
Bootstrap support for Q75B62 as seed ortholog is 100%.
Bootstrap support for Q8ZVA7 as seed ortholog is 100%.

Group of orthologs #204. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 P.aerophilum:89

Q752Z9              	100.00%		Q8ZVB5              	100.00%
Bootstrap support for Q752Z9 as seed ortholog is 100%.
Bootstrap support for Q8ZVB5 as seed ortholog is 100%.

Group of orthologs #205. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 P.aerophilum:89

Q758M0              	100.00%		Q8ZUW4              	100.00%
Bootstrap support for Q758M0 as seed ortholog is 100%.
Bootstrap support for Q8ZUW4 as seed ortholog is 100%.

Group of orthologs #206. Best score 88 bits
Score difference with first non-orthologous sequence - A.gossypii:88 P.aerophilum:11

Q75DN5              	100.00%		Q8ZV43              	100.00%
Bootstrap support for Q75DN5 as seed ortholog is 100%.
Bootstrap support for Q8ZV43 as seed ortholog is 56%.
Alternative seed ortholog is Q8ZVD8 (11 bits away from this cluster)

Group of orthologs #207. Best score 88 bits
Score difference with first non-orthologous sequence - A.gossypii:88 P.aerophilum:12

Q75B26              	100.00%		Q8ZY38              	100.00%
Bootstrap support for Q75B26 as seed ortholog is 100%.
Bootstrap support for Q8ZY38 as seed ortholog is 62%.
Alternative seed ortholog is Q8ZY73 (12 bits away from this cluster)

Group of orthologs #208. Best score 88 bits
Score difference with first non-orthologous sequence - A.gossypii:88 P.aerophilum:88

Q75E11              	100.00%		Q8ZWI0              	100.00%
Bootstrap support for Q75E11 as seed ortholog is 100%.
Bootstrap support for Q8ZWI0 as seed ortholog is 100%.

Group of orthologs #209. Best score 88 bits
Score difference with first non-orthologous sequence - A.gossypii:41 P.aerophilum:88

Q75F52              	100.00%		Q8ZVN0              	100.00%
Bootstrap support for Q75F52 as seed ortholog is 91%.
Bootstrap support for Q8ZVN0 as seed ortholog is 100%.

Group of orthologs #210. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:5 P.aerophilum:87

Q757T2              	100.00%		Q8ZTA5              	100.00%
Bootstrap support for Q757T2 as seed ortholog is 61%.
Alternative seed ortholog is Q75DY8 (5 bits away from this cluster)
Bootstrap support for Q8ZTA5 as seed ortholog is 100%.

Group of orthologs #211. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 P.aerophilum:87

Q751P5              	100.00%		Q8ZY96              	100.00%
Bootstrap support for Q751P5 as seed ortholog is 100%.
Bootstrap support for Q8ZY96 as seed ortholog is 100%.

Group of orthologs #212. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 P.aerophilum:86

Q750G3              	100.00%		Q8ZU14              	100.00%
Q74ZT4              	5.28%		
Bootstrap support for Q750G3 as seed ortholog is 100%.
Bootstrap support for Q8ZU14 as seed ortholog is 100%.

Group of orthologs #213. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:86 P.aerophilum:86

Q75D12              	100.00%		Q8ZYM4              	100.00%
Bootstrap support for Q75D12 as seed ortholog is 100%.
Bootstrap support for Q8ZYM4 as seed ortholog is 100%.

Group of orthologs #214. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 P.aerophilum:85

Q755D9              	100.00%		Q8ZTT4              	100.00%
Bootstrap support for Q755D9 as seed ortholog is 100%.
Bootstrap support for Q8ZTT4 as seed ortholog is 100%.

Group of orthologs #215. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 P.aerophilum:85

Q756H6              	100.00%		Q8ZTG3              	100.00%
Bootstrap support for Q756H6 as seed ortholog is 100%.
Bootstrap support for Q8ZTG3 as seed ortholog is 100%.

Group of orthologs #216. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:6 P.aerophilum:84

Q753H9              	100.00%		Q8ZVE1              	100.00%
Q75E76              	100.00%		Q8ZUI5              	100.00%
Q75E88              	87.88%		Q8ZUB1              	23.22%
Bootstrap support for Q753H9 as seed ortholog is 51%.
Alternative seed ortholog is Q755Y2 (6 bits away from this cluster)
Bootstrap support for Q75E76 as seed ortholog is 56%.
Alternative seed ortholog is Q755Y2 (6 bits away from this cluster)
Bootstrap support for Q8ZVE1 as seed ortholog is 100%.
Bootstrap support for Q8ZUI5 as seed ortholog is 100%.

Group of orthologs #217. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 P.aerophilum:84

Q750E3              	100.00%		Q8ZXW9              	100.00%
Q758B3              	11.33%		
Q750D4              	9.17%		
Bootstrap support for Q750E3 as seed ortholog is 100%.
Bootstrap support for Q8ZXW9 as seed ortholog is 100%.

Group of orthologs #218. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 P.aerophilum:84

Q75CV0              	100.00%		Q8ZTD4              	100.00%
Bootstrap support for Q75CV0 as seed ortholog is 100%.
Bootstrap support for Q8ZTD4 as seed ortholog is 100%.

Group of orthologs #219. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 P.aerophilum:84

Q75F65              	100.00%		Q8ZZM5              	100.00%
Bootstrap support for Q75F65 as seed ortholog is 100%.
Bootstrap support for Q8ZZM5 as seed ortholog is 100%.

Group of orthologs #220. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 P.aerophilum:82

Q75B81              	100.00%		Q8ZTY0              	100.00%
                    	       		Q8ZYL6              	7.49%
Bootstrap support for Q75B81 as seed ortholog is 100%.
Bootstrap support for Q8ZTY0 as seed ortholog is 100%.

Group of orthologs #221. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 P.aerophilum:82

Q756S5              	100.00%		Q8ZVV8              	100.00%
Bootstrap support for Q756S5 as seed ortholog is 100%.
Bootstrap support for Q8ZVV8 as seed ortholog is 100%.

Group of orthologs #222. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 P.aerophilum:82

Q75AS8              	100.00%		Q8ZTX8              	100.00%
Bootstrap support for Q75AS8 as seed ortholog is 100%.
Bootstrap support for Q8ZTX8 as seed ortholog is 100%.

Group of orthologs #223. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:31 P.aerophilum:31

Q752L3              	100.00%		Q8ZUD8              	100.00%
Bootstrap support for Q752L3 as seed ortholog is 85%.
Bootstrap support for Q8ZUD8 as seed ortholog is 83%.

Group of orthologs #224. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 P.aerophilum:81

Q75D55              	100.00%		Q8ZW86              	100.00%
Bootstrap support for Q75D55 as seed ortholog is 100%.
Bootstrap support for Q8ZW86 as seed ortholog is 100%.

Group of orthologs #225. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 P.aerophilum:80

Q74ZF8              	100.00%		Q8ZTY5              	100.00%
Bootstrap support for Q74ZF8 as seed ortholog is 100%.
Bootstrap support for Q8ZTY5 as seed ortholog is 100%.

Group of orthologs #226. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 P.aerophilum:80

Q756A0              	100.00%		Q8ZYQ1              	100.00%
Bootstrap support for Q756A0 as seed ortholog is 100%.
Bootstrap support for Q8ZYQ1 as seed ortholog is 100%.

Group of orthologs #227. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 P.aerophilum:80

Q75C47              	100.00%		Q8ZZX3              	100.00%
Bootstrap support for Q75C47 as seed ortholog is 100%.
Bootstrap support for Q8ZZX3 as seed ortholog is 100%.

Group of orthologs #228. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:15 P.aerophilum:79

Q755B5              	100.00%		Q8ZYE4              	100.00%
Q758E1              	69.15%		
Q755C4              	17.41%		
Q757U5              	15.82%		
Q75A85              	12.97%		
Q755K5              	6.49%		
Bootstrap support for Q755B5 as seed ortholog is 67%.
Alternative seed ortholog is Q751E8 (15 bits away from this cluster)
Bootstrap support for Q8ZYE4 as seed ortholog is 100%.

Group of orthologs #229. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 P.aerophilum:79

Q75CP8              	100.00%		Q8ZST9              	100.00%
                    	       		Q8ZYL4              	8.33%
Bootstrap support for Q75CP8 as seed ortholog is 100%.
Bootstrap support for Q8ZST9 as seed ortholog is 100%.

Group of orthologs #230. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 P.aerophilum:79

Q74ZF7              	100.00%		Q8ZYE1              	100.00%
Bootstrap support for Q74ZF7 as seed ortholog is 100%.
Bootstrap support for Q8ZYE1 as seed ortholog is 100%.

Group of orthologs #231. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 P.aerophilum:79

Q754E7              	100.00%		Q8ZXR9              	100.00%
Bootstrap support for Q754E7 as seed ortholog is 100%.
Bootstrap support for Q8ZXR9 as seed ortholog is 100%.

Group of orthologs #232. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 P.aerophilum:79

Q75ED1              	100.00%		Q8ZT91              	100.00%
Bootstrap support for Q75ED1 as seed ortholog is 100%.
Bootstrap support for Q8ZT91 as seed ortholog is 100%.

Group of orthologs #233. Best score 78 bits
Score difference with first non-orthologous sequence - A.gossypii:78 P.aerophilum:78

Q75DW4              	100.00%		Q8ZWL3              	100.00%
Bootstrap support for Q75DW4 as seed ortholog is 100%.
Bootstrap support for Q8ZWL3 as seed ortholog is 100%.

Group of orthologs #234. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 P.aerophilum:77

Q759X1              	100.00%		Q8ZVB2              	100.00%
Q759M4              	38.03%		
Q75AT4              	23.77%		
Bootstrap support for Q759X1 as seed ortholog is 100%.
Bootstrap support for Q8ZVB2 as seed ortholog is 100%.

Group of orthologs #235. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 P.aerophilum:77

Q755F3              	100.00%		Q8ZYA5              	100.00%
Bootstrap support for Q755F3 as seed ortholog is 100%.
Bootstrap support for Q8ZYA5 as seed ortholog is 100%.

Group of orthologs #236. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 P.aerophilum:76

Q754B3              	100.00%		Q8ZTP1              	100.00%
Bootstrap support for Q754B3 as seed ortholog is 100%.
Bootstrap support for Q8ZTP1 as seed ortholog is 100%.

Group of orthologs #237. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 P.aerophilum:76

Q752U5              	100.00%		Q8ZYQ6              	100.00%
Bootstrap support for Q752U5 as seed ortholog is 100%.
Bootstrap support for Q8ZYQ6 as seed ortholog is 100%.

Group of orthologs #238. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 P.aerophilum:76

Q75A12              	100.00%		Q8ZU18              	100.00%
Bootstrap support for Q75A12 as seed ortholog is 100%.
Bootstrap support for Q8ZU18 as seed ortholog is 100%.

Group of orthologs #239. Best score 75 bits
Score difference with first non-orthologous sequence - A.gossypii:75 P.aerophilum:75

Q75CZ4              	100.00%		Q8ZWA8              	100.00%
Q759Z1              	39.47%		
Q759N6              	11.66%		
Bootstrap support for Q75CZ4 as seed ortholog is 100%.
Bootstrap support for Q8ZWA8 as seed ortholog is 100%.

Group of orthologs #240. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:14 P.aerophilum:74

Q753B5              	100.00%		Q8ZYH6              	100.00%
Bootstrap support for Q753B5 as seed ortholog is 65%.
Alternative seed ortholog is Q75A80 (14 bits away from this cluster)
Bootstrap support for Q8ZYH6 as seed ortholog is 100%.

Group of orthologs #241. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 P.aerophilum:74

Q75DI4              	100.00%		Q8ZU80              	100.00%
Bootstrap support for Q75DI4 as seed ortholog is 100%.
Bootstrap support for Q8ZU80 as seed ortholog is 100%.

Group of orthologs #242. Best score 73 bits
Score difference with first non-orthologous sequence - A.gossypii:73 P.aerophilum:73

Q750Z9              	100.00%		Q8ZWP3              	100.00%
Bootstrap support for Q750Z9 as seed ortholog is 100%.
Bootstrap support for Q8ZWP3 as seed ortholog is 100%.

Group of orthologs #243. Best score 73 bits
Score difference with first non-orthologous sequence - A.gossypii:73 P.aerophilum:73

Q755C8              	100.00%		Q8ZXR6              	100.00%
Bootstrap support for Q755C8 as seed ortholog is 100%.
Bootstrap support for Q8ZXR6 as seed ortholog is 100%.

Group of orthologs #244. Best score 73 bits
Score difference with first non-orthologous sequence - A.gossypii:73 P.aerophilum:73

Q756A4              	100.00%		Q8ZXL6              	100.00%
Bootstrap support for Q756A4 as seed ortholog is 100%.
Bootstrap support for Q8ZXL6 as seed ortholog is 100%.

Group of orthologs #245. Best score 73 bits
Score difference with first non-orthologous sequence - A.gossypii:73 P.aerophilum:73

Q75BE8              	100.00%		Q8ZTE2              	100.00%
Bootstrap support for Q75BE8 as seed ortholog is 100%.
Bootstrap support for Q8ZTE2 as seed ortholog is 100%.

Group of orthologs #246. Best score 73 bits
Score difference with first non-orthologous sequence - A.gossypii:73 P.aerophilum:73

Q75EX2              	100.00%		Q8ZT70              	100.00%
Bootstrap support for Q75EX2 as seed ortholog is 100%.
Bootstrap support for Q8ZT70 as seed ortholog is 100%.

Group of orthologs #247. Best score 73 bits
Score difference with first non-orthologous sequence - A.gossypii:73 P.aerophilum:73

Q75F96              	100.00%		Q8ZVM7              	100.00%
Bootstrap support for Q75F96 as seed ortholog is 100%.
Bootstrap support for Q8ZVM7 as seed ortholog is 100%.

Group of orthologs #248. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 P.aerophilum:72

Q756I6              	100.00%		Q8ZXV9              	100.00%
Bootstrap support for Q756I6 as seed ortholog is 100%.
Bootstrap support for Q8ZXV9 as seed ortholog is 100%.

Group of orthologs #249. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 P.aerophilum:72

Q756N6              	100.00%		Q8ZZC7              	100.00%
Bootstrap support for Q756N6 as seed ortholog is 100%.
Bootstrap support for Q8ZZC7 as seed ortholog is 100%.

Group of orthologs #250. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 P.aerophilum:72

Q75AA8              	100.00%		Q8ZWT7              	100.00%
Bootstrap support for Q75AA8 as seed ortholog is 100%.
Bootstrap support for Q8ZWT7 as seed ortholog is 100%.

Group of orthologs #251. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:17 P.aerophilum:71

Q750R4              	100.00%		Q8ZW13              	100.00%
                    	       		Q8ZYT2              	12.98%
Bootstrap support for Q750R4 as seed ortholog is 61%.
Alternative seed ortholog is Q750E7 (17 bits away from this cluster)
Bootstrap support for Q8ZW13 as seed ortholog is 100%.

Group of orthologs #252. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 P.aerophilum:71

Q75DV3              	100.00%		Q8ZUB0              	100.00%
Bootstrap support for Q75DV3 as seed ortholog is 100%.
Bootstrap support for Q8ZUB0 as seed ortholog is 100%.

Group of orthologs #253. Best score 70 bits
Score difference with first non-orthologous sequence - A.gossypii:70 P.aerophilum:70

Q753F8              	100.00%		P56635              	100.00%
Bootstrap support for Q753F8 as seed ortholog is 100%.
Bootstrap support for P56635 as seed ortholog is 100%.

Group of orthologs #254. Best score 70 bits
Score difference with first non-orthologous sequence - A.gossypii:70 P.aerophilum:70

Q753E7              	100.00%		Q8ZY35              	100.00%
Bootstrap support for Q753E7 as seed ortholog is 100%.
Bootstrap support for Q8ZY35 as seed ortholog is 100%.

Group of orthologs #255. Best score 70 bits
Score difference with first non-orthologous sequence - A.gossypii:21 P.aerophilum:70

Q757K8              	100.00%		Q8ZXZ8              	100.00%
Bootstrap support for Q757K8 as seed ortholog is 66%.
Alternative seed ortholog is Q757Y2 (21 bits away from this cluster)
Bootstrap support for Q8ZXZ8 as seed ortholog is 100%.

Group of orthologs #256. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 P.aerophilum:69

Q75C44              	100.00%		Q8ZY05              	100.00%
Q75C14              	20.28%		
Bootstrap support for Q75C44 as seed ortholog is 100%.
Bootstrap support for Q8ZY05 as seed ortholog is 100%.

Group of orthologs #257. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 P.aerophilum:69

Q757Z7              	100.00%		Q8ZWH7              	100.00%
Bootstrap support for Q757Z7 as seed ortholog is 100%.
Bootstrap support for Q8ZWH7 as seed ortholog is 100%.

Group of orthologs #258. Best score 68 bits
Score difference with first non-orthologous sequence - A.gossypii:68 P.aerophilum:68

Q753C6              	100.00%		Q8ZT20              	100.00%
Bootstrap support for Q753C6 as seed ortholog is 100%.
Bootstrap support for Q8ZT20 as seed ortholog is 100%.

Group of orthologs #259. Best score 68 bits
Score difference with first non-orthologous sequence - A.gossypii:68 P.aerophilum:68

P62513              	100.00%		Q8ZXC5              	100.00%
Bootstrap support for P62513 as seed ortholog is 100%.
Bootstrap support for Q8ZXC5 as seed ortholog is 100%.

Group of orthologs #260. Best score 68 bits
Score difference with first non-orthologous sequence - A.gossypii:68 P.aerophilum:68

Q753X8              	100.00%		Q8ZVQ6              	100.00%
Bootstrap support for Q753X8 as seed ortholog is 100%.
Bootstrap support for Q8ZVQ6 as seed ortholog is 100%.

Group of orthologs #261. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 P.aerophilum:67

Q754B8              	100.00%		Q8ZZG9              	100.00%
                    	       		Q8ZZD2              	21.35%
                    	       		Q8ZTW1              	18.61%
                    	       		Q8ZXE6              	12.41%
                    	       		Q8ZXP8              	10.22%
                    	       		Q8ZZV5              	9.31%
                    	       		Q8ZV42              	8.76%
                    	       		Q8ZUH3              	8.58%
                    	       		Q8ZX95              	8.39%
                    	       		Q8ZVX1              	8.03%
                    	       		Q8ZU93              	7.48%
                    	       		Q8ZTA1              	7.30%
                    	       		Q8ZW29              	7.12%
                    	       		Q8ZX96              	7.12%
                    	       		Q8ZZC4              	6.93%
                    	       		Q8ZVH0              	6.75%
                    	       		Q8ZXL2              	6.75%
                    	       		Q8ZXG5              	6.39%
                    	       		Q8ZX91              	6.20%
                    	       		Q8ZXJ7              	5.66%
                    	       		Q8ZXM7              	5.66%
                    	       		Q8ZXW3              	5.66%
Bootstrap support for Q754B8 as seed ortholog is 100%.
Bootstrap support for Q8ZZG9 as seed ortholog is 100%.

Group of orthologs #262. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 P.aerophilum:67

Q753J9              	100.00%		Q8ZZH5              	100.00%
Q75AR1              	44.30%		
Bootstrap support for Q753J9 as seed ortholog is 100%.
Bootstrap support for Q8ZZH5 as seed ortholog is 100%.

Group of orthologs #263. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 P.aerophilum:67

Q754V6              	100.00%		Q8ZT50              	100.00%
Bootstrap support for Q754V6 as seed ortholog is 100%.
Bootstrap support for Q8ZT50 as seed ortholog is 100%.

Group of orthologs #264. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 P.aerophilum:67

Q755M8              	100.00%		Q8ZVQ8              	100.00%
Bootstrap support for Q755M8 as seed ortholog is 100%.
Bootstrap support for Q8ZVQ8 as seed ortholog is 100%.

Group of orthologs #265. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 P.aerophilum:66

Q753U5              	100.00%		Q8ZYY0              	100.00%
Q74Z84              	40.95%		
Q757P2              	38.75%		
Q750B8              	35.85%		
Q750B9              	33.83%		
Q750B7              	33.74%		
Q751X7              	33.66%		
Q75B49              	29.70%		
Q755W3              	27.15%		
Q752A7              	24.08%		
Q752A8              	22.76%		
Q75CQ4              	19.24%		
Q754B4              	18.37%		
Q75EP1              	15.20%		
Q750W0              	14.32%		
Bootstrap support for Q753U5 as seed ortholog is 100%.
Bootstrap support for Q8ZYY0 as seed ortholog is 100%.

Group of orthologs #266. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 P.aerophilum:66

Q74ZD8              	100.00%		Q8ZTA7              	100.00%
Bootstrap support for Q74ZD8 as seed ortholog is 100%.
Bootstrap support for Q8ZTA7 as seed ortholog is 100%.

Group of orthologs #267. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 P.aerophilum:66

Q74Z75              	100.00%		Q8ZVN8              	100.00%
Bootstrap support for Q74Z75 as seed ortholog is 100%.
Bootstrap support for Q8ZVN8 as seed ortholog is 100%.

Group of orthologs #268. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 P.aerophilum:66

Q751I7              	100.00%		Q8ZVV9              	100.00%
Bootstrap support for Q751I7 as seed ortholog is 100%.
Bootstrap support for Q8ZVV9 as seed ortholog is 100%.

Group of orthologs #269. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 P.aerophilum:66

Q74Z49              	100.00%		Q8ZY04              	100.00%
Bootstrap support for Q74Z49 as seed ortholog is 100%.
Bootstrap support for Q8ZY04 as seed ortholog is 100%.

Group of orthologs #270. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:65 P.aerophilum:65

Q752V7              	100.00%		Q8ZU08              	100.00%
Bootstrap support for Q752V7 as seed ortholog is 100%.
Bootstrap support for Q8ZU08 as seed ortholog is 100%.

Group of orthologs #271. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:65 P.aerophilum:65

Q751L1              	100.00%		Q8ZVN1              	100.00%
Bootstrap support for Q751L1 as seed ortholog is 100%.
Bootstrap support for Q8ZVN1 as seed ortholog is 100%.

Group of orthologs #272. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:65 P.aerophilum:65

Q754P8              	100.00%		Q8ZUN9              	100.00%
Bootstrap support for Q754P8 as seed ortholog is 100%.
Bootstrap support for Q8ZUN9 as seed ortholog is 100%.

Group of orthologs #273. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:65 P.aerophilum:65

Q75F36              	100.00%		Q8ZZ46              	100.00%
Bootstrap support for Q75F36 as seed ortholog is 100%.
Bootstrap support for Q8ZZ46 as seed ortholog is 100%.

Group of orthologs #274. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 P.aerophilum:64

Q754N8              	100.00%		Q8ZTY3              	100.00%
Bootstrap support for Q754N8 as seed ortholog is 100%.
Bootstrap support for Q8ZTY3 as seed ortholog is 100%.

Group of orthologs #275. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 P.aerophilum:64

Q759Q9              	100.00%		Q8ZZK1              	100.00%
Bootstrap support for Q759Q9 as seed ortholog is 100%.
Bootstrap support for Q8ZZK1 as seed ortholog is 100%.

Group of orthologs #276. Best score 63 bits
Score difference with first non-orthologous sequence - A.gossypii:63 P.aerophilum:63

Q758N4              	100.00%		Q8ZTF9              	100.00%
Bootstrap support for Q758N4 as seed ortholog is 100%.
Bootstrap support for Q8ZTF9 as seed ortholog is 100%.

Group of orthologs #277. Best score 63 bits
Score difference with first non-orthologous sequence - A.gossypii:63 P.aerophilum:63

Q75BJ3              	100.00%		Q7LX30              	100.00%
Bootstrap support for Q75BJ3 as seed ortholog is 100%.
Bootstrap support for Q7LX30 as seed ortholog is 100%.

Group of orthologs #278. Best score 63 bits
Score difference with first non-orthologous sequence - A.gossypii:3 P.aerophilum:63

Q75C67              	100.00%		Q8ZSV9              	100.00%
Bootstrap support for Q75C67 as seed ortholog is 54%.
Alternative seed ortholog is Q753Q2 (3 bits away from this cluster)
Bootstrap support for Q8ZSV9 as seed ortholog is 100%.

Group of orthologs #279. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 P.aerophilum:62

Q75BT9              	100.00%		Q8ZT45              	100.00%
                    	       		Q8ZUY0              	100.00%
Bootstrap support for Q75BT9 as seed ortholog is 100%.
Bootstrap support for Q8ZT45 as seed ortholog is 100%.
Bootstrap support for Q8ZUY0 as seed ortholog is 100%.

Group of orthologs #280. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:18 P.aerophilum:62

Q750C6              	100.00%		Q8ZTX9              	100.00%
Bootstrap support for Q750C6 as seed ortholog is 73%.
Alternative seed ortholog is Q755B3 (18 bits away from this cluster)
Bootstrap support for Q8ZTX9 as seed ortholog is 100%.

Group of orthologs #281. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 P.aerophilum:62

Q755B9              	100.00%		Q8ZXW6              	100.00%
Bootstrap support for Q755B9 as seed ortholog is 100%.
Bootstrap support for Q8ZXW6 as seed ortholog is 100%.

Group of orthologs #282. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 P.aerophilum:61

Q750J6              	100.00%		Q8ZU76              	100.00%
Bootstrap support for Q750J6 as seed ortholog is 100%.
Bootstrap support for Q8ZU76 as seed ortholog is 100%.

Group of orthologs #283. Best score 61 bits
Score difference with first non-orthologous sequence - A.gossypii:61 P.aerophilum:61

Q75DA8              	100.00%		Q8ZWZ0              	100.00%
Bootstrap support for Q75DA8 as seed ortholog is 100%.
Bootstrap support for Q8ZWZ0 as seed ortholog is 100%.

Group of orthologs #284. Best score 60 bits
Score difference with first non-orthologous sequence - A.gossypii:60 P.aerophilum:60

Q754T6              	100.00%		Q8ZVB6              	100.00%
Bootstrap support for Q754T6 as seed ortholog is 100%.
Bootstrap support for Q8ZVB6 as seed ortholog is 100%.

Group of orthologs #285. Best score 60 bits
Score difference with first non-orthologous sequence - A.gossypii:60 P.aerophilum:60

Q75EW2              	100.00%		Q8ZVM8              	100.00%
Bootstrap support for Q75EW2 as seed ortholog is 100%.
Bootstrap support for Q8ZVM8 as seed ortholog is 100%.

Group of orthologs #286. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 P.aerophilum:59

Q751D7              	100.00%		Q8ZVA9              	100.00%
Bootstrap support for Q751D7 as seed ortholog is 100%.
Bootstrap support for Q8ZVA9 as seed ortholog is 100%.

Group of orthologs #287. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 P.aerophilum:59

Q756D2              	100.00%		Q8ZTT2              	100.00%
Bootstrap support for Q756D2 as seed ortholog is 100%.
Bootstrap support for Q8ZTT2 as seed ortholog is 100%.

Group of orthologs #288. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 P.aerophilum:59

Q75CR9              	100.00%		Q8ZU30              	100.00%
Bootstrap support for Q75CR9 as seed ortholog is 100%.
Bootstrap support for Q8ZU30 as seed ortholog is 100%.

Group of orthologs #289. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 P.aerophilum:59

Q756N3              	100.00%		Q8ZZK5              	100.00%
Bootstrap support for Q756N3 as seed ortholog is 100%.
Bootstrap support for Q8ZZK5 as seed ortholog is 100%.

Group of orthologs #290. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 P.aerophilum:59

Q75CG2              	100.00%		Q8ZV65              	100.00%
Bootstrap support for Q75CG2 as seed ortholog is 100%.
Bootstrap support for Q8ZV65 as seed ortholog is 100%.

Group of orthologs #291. Best score 58 bits
Score difference with first non-orthologous sequence - A.gossypii:58 P.aerophilum:58

Q755F6              	100.00%		Q8ZZ49              	100.00%
Bootstrap support for Q755F6 as seed ortholog is 100%.
Bootstrap support for Q8ZZ49 as seed ortholog is 100%.

Group of orthologs #292. Best score 58 bits
Score difference with first non-orthologous sequence - A.gossypii:58 P.aerophilum:10

Q75F24              	100.00%		Q8ZUK9              	100.00%
Bootstrap support for Q75F24 as seed ortholog is 100%.
Bootstrap support for Q8ZUK9 as seed ortholog is 59%.
Alternative seed ortholog is Q8ZUV9 (10 bits away from this cluster)

Group of orthologs #293. Best score 58 bits
Score difference with first non-orthologous sequence - A.gossypii:58 P.aerophilum:58

Q75BV8              	100.00%		Q8ZYP9              	100.00%
Bootstrap support for Q75BV8 as seed ortholog is 100%.
Bootstrap support for Q8ZYP9 as seed ortholog is 100%.

Group of orthologs #294. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 P.aerophilum:57

Q755M1              	100.00%		Q8ZZM4              	100.00%
Q755L9              	77.47%		
Q755L8              	68.86%		
Q752H1              	31.53%		
Q75A29              	20.12%		
Q757Q4              	15.28%		
Q753G9              	13.44%		
Q759Y4              	12.77%		
Q75CZ9              	9.09%		
Q754V5              	8.41%		
Q751I3              	5.90%		
Bootstrap support for Q755M1 as seed ortholog is 100%.
Bootstrap support for Q8ZZM4 as seed ortholog is 100%.

Group of orthologs #295. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 P.aerophilum:57

Q75C52              	100.00%		Q8ZTY4              	100.00%
Bootstrap support for Q75C52 as seed ortholog is 100%.
Bootstrap support for Q8ZTY4 as seed ortholog is 100%.

Group of orthologs #296. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 P.aerophilum:57

Q75D36              	100.00%		Q8ZVR4              	100.00%
Bootstrap support for Q75D36 as seed ortholog is 100%.
Bootstrap support for Q8ZVR4 as seed ortholog is 100%.

Group of orthologs #297. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 P.aerophilum:56

Q75EI7              	100.00%		Q8ZXU2              	100.00%
                    	       		Q8ZXS6              	10.19%
Bootstrap support for Q75EI7 as seed ortholog is 100%.
Bootstrap support for Q8ZXU2 as seed ortholog is 100%.

Group of orthologs #298. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 P.aerophilum:56

Q75BC3              	100.00%		Q8ZVP4              	100.00%
Bootstrap support for Q75BC3 as seed ortholog is 100%.
Bootstrap support for Q8ZVP4 as seed ortholog is 100%.

Group of orthologs #299. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 P.aerophilum:56

Q75AV0              	100.00%		Q8ZY91              	100.00%
Bootstrap support for Q75AV0 as seed ortholog is 100%.
Bootstrap support for Q8ZY91 as seed ortholog is 100%.

Group of orthologs #300. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:55 P.aerophilum:55

Q757G1              	100.00%		Q8ZVW1              	100.00%
Bootstrap support for Q757G1 as seed ortholog is 100%.
Bootstrap support for Q8ZVW1 as seed ortholog is 100%.

Group of orthologs #301. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:55 P.aerophilum:55

Q75DL3              	100.00%		Q8ZYB4              	100.00%
Bootstrap support for Q75DL3 as seed ortholog is 100%.
Bootstrap support for Q8ZYB4 as seed ortholog is 100%.

Group of orthologs #302. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 P.aerophilum:54

Q757Z2              	100.00%		Q8ZVD7              	100.00%
Q751M2              	22.90%		
Q751M3              	11.99%		
Bootstrap support for Q757Z2 as seed ortholog is 100%.
Bootstrap support for Q8ZVD7 as seed ortholog is 100%.

Group of orthologs #303. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 P.aerophilum:54

Q75A93              	100.00%		Q8ZVL9              	100.00%
Bootstrap support for Q75A93 as seed ortholog is 100%.
Bootstrap support for Q8ZVL9 as seed ortholog is 100%.

Group of orthologs #304. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 P.aerophilum:54

Q8J1F7              	100.00%		Q8ZXQ6              	100.00%
Bootstrap support for Q8J1F7 as seed ortholog is 100%.
Bootstrap support for Q8ZXQ6 as seed ortholog is 100%.

Group of orthologs #305. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 P.aerophilum:52

Q758L5              	100.00%		Q8ZTB5              	100.00%
Bootstrap support for Q758L5 as seed ortholog is 100%.
Bootstrap support for Q8ZTB5 as seed ortholog is 100%.

Group of orthologs #306. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 P.aerophilum:52

Q75AR2              	100.00%		Q8ZWC4              	100.00%
Bootstrap support for Q75AR2 as seed ortholog is 100%.
Bootstrap support for Q8ZWC4 as seed ortholog is 100%.

Group of orthologs #307. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 P.aerophilum:52

Q7YFV7              	100.00%		Q8ZXD0              	100.00%
Bootstrap support for Q7YFV7 as seed ortholog is 100%.
Bootstrap support for Q8ZXD0 as seed ortholog is 100%.

Group of orthologs #308. Best score 51 bits
Score difference with first non-orthologous sequence - A.gossypii:51 P.aerophilum:51

Q750N0              	100.00%		Q8ZTX7              	100.00%
Bootstrap support for Q750N0 as seed ortholog is 100%.
Bootstrap support for Q8ZTX7 as seed ortholog is 100%.

Group of orthologs #309. Best score 51 bits
Score difference with first non-orthologous sequence - A.gossypii:51 P.aerophilum:51

Q750Y8              	100.00%		Q8ZX28              	100.00%
Bootstrap support for Q750Y8 as seed ortholog is 100%.
Bootstrap support for Q8ZX28 as seed ortholog is 100%.

Group of orthologs #310. Best score 49 bits
Score difference with first non-orthologous sequence - A.gossypii:49 P.aerophilum:49

Q75CE1              	100.00%		Q8ZTG4              	100.00%
Bootstrap support for Q75CE1 as seed ortholog is 100%.
Bootstrap support for Q8ZTG4 as seed ortholog is 100%.

Group of orthologs #311. Best score 48 bits
Score difference with first non-orthologous sequence - A.gossypii:48 P.aerophilum:48

Q755M7              	100.00%		Q8ZXA3              	100.00%
                    	       		Q8ZV22              	25.98%
                    	       		Q8ZV35              	24.15%
                    	       		Q8ZVY0              	19.06%
Bootstrap support for Q755M7 as seed ortholog is 100%.
Bootstrap support for Q8ZXA3 as seed ortholog is 100%.

Group of orthologs #312. Best score 48 bits
Score difference with first non-orthologous sequence - A.gossypii:48 P.aerophilum:48

Q753H3              	100.00%		Q8ZSP2              	100.00%
Bootstrap support for Q753H3 as seed ortholog is 100%.
Bootstrap support for Q8ZSP2 as seed ortholog is 100%.

Group of orthologs #313. Best score 47 bits
Score difference with first non-orthologous sequence - A.gossypii:47 P.aerophilum:47

Q75DU3              	100.00%		Q8ZTX2              	100.00%
                    	       		Q8ZSZ0              	18.87%
Bootstrap support for Q75DU3 as seed ortholog is 100%.
Bootstrap support for Q8ZTX2 as seed ortholog is 100%.

Group of orthologs #314. Best score 47 bits
Score difference with first non-orthologous sequence - A.gossypii:47 P.aerophilum:47

Q757D7              	100.00%		Q8ZTU2              	100.00%
Bootstrap support for Q757D7 as seed ortholog is 100%.
Bootstrap support for Q8ZTU2 as seed ortholog is 100%.

Group of orthologs #315. Best score 47 bits
Score difference with first non-orthologous sequence - A.gossypii:47 P.aerophilum:47

Q752L4              	100.00%		Q8ZYJ4              	100.00%
Bootstrap support for Q752L4 as seed ortholog is 100%.
Bootstrap support for Q8ZYJ4 as seed ortholog is 100%.

Group of orthologs #316. Best score 45 bits
Score difference with first non-orthologous sequence - A.gossypii:45 P.aerophilum:45

Q756Y9              	100.00%		Q8ZYG5              	100.00%
Bootstrap support for Q756Y9 as seed ortholog is 100%.
Bootstrap support for Q8ZYG5 as seed ortholog is 100%.

Group of orthologs #317. Best score 43 bits
Score difference with first non-orthologous sequence - A.gossypii:1 P.aerophilum:43

Q752R2              	100.00%		Q8ZYP8              	100.00%
Bootstrap support for Q752R2 as seed ortholog is 47%.
Alternative seed ortholog is Q75BR7 (1 bits away from this cluster)
Bootstrap support for Q8ZYP8 as seed ortholog is 100%.

Group of orthologs #318. Best score 42 bits
Score difference with first non-orthologous sequence - A.gossypii:42 P.aerophilum:42

Q752V9              	100.00%		Q8ZW60              	100.00%
Q75B39              	28.42%		Q8ZT74              	42.32%
Q75D02              	12.84%		Q8ZT06              	28.33%
Q750L3              	11.58%		Q8ZTH2              	25.60%
Q75CK3              	10.32%		Q8ZTE7              	23.55%
Q74ZE2              	9.68%		Q8ZUH0              	11.60%
Q75CA9              	8.84%		
Q9HF54              	8.84%		
Q755T4              	8.21%		
Q75D41              	8.00%		
Q75F92              	6.32%		
Q9HF56              	6.11%		
Q9HF51              	6.11%		
Q75CK6              	5.05%		
Q9P8V0              	5.05%		
Bootstrap support for Q752V9 as seed ortholog is 100%.
Bootstrap support for Q8ZW60 as seed ortholog is 100%.

Group of orthologs #319. Best score 42 bits
Score difference with first non-orthologous sequence - A.gossypii:42 P.aerophilum:42

Q759W4              	100.00%		Q8ZZH3              	100.00%
Bootstrap support for Q759W4 as seed ortholog is 100%.
Bootstrap support for Q8ZZH3 as seed ortholog is 100%.