###################################
316 groups of orthologs
367 in-paralogs from A.gossypii
376 in-paralogs from P.kodakaraensis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 797 bits
Score difference with first non-orthologous sequence - A.gossypii:48 P.kodakaraensis:797

Q753Q4              	100.00%		Q5JE32              	100.00%
Bootstrap support for Q753Q4 as seed ortholog is 74%.
Alternative seed ortholog is Q75B52 (48 bits away from this cluster)
Bootstrap support for Q5JE32 as seed ortholog is 100%.

Group of orthologs #2. Best score 633 bits
Score difference with first non-orthologous sequence - A.gossypii:200 P.kodakaraensis:633

Q756K2              	100.00%		Q5JE33              	100.00%
Bootstrap support for Q756K2 as seed ortholog is 99%.
Bootstrap support for Q5JE33 as seed ortholog is 100%.

Group of orthologs #3. Best score 618 bits
Score difference with first non-orthologous sequence - A.gossypii:158 P.kodakaraensis:618

Q754B2              	100.00%		Q5JE98              	100.00%
                    	       		Q9V2X2              	53.07%
Bootstrap support for Q754B2 as seed ortholog is 99%.
Bootstrap support for Q5JE98 as seed ortholog is 100%.

Group of orthologs #4. Best score 584 bits
Score difference with first non-orthologous sequence - A.gossypii:475 P.kodakaraensis:584

Q9UVJ8              	100.00%		Q5JIR3              	100.00%
Bootstrap support for Q9UVJ8 as seed ortholog is 100%.
Bootstrap support for Q5JIR3 as seed ortholog is 100%.

Group of orthologs #5. Best score 562 bits
Score difference with first non-orthologous sequence - A.gossypii:403 P.kodakaraensis:562

Q75BE4              	100.00%		Q5JIR2              	100.00%
Bootstrap support for Q75BE4 as seed ortholog is 100%.
Bootstrap support for Q5JIR2 as seed ortholog is 100%.

Group of orthologs #6. Best score 554 bits
Score difference with first non-orthologous sequence - A.gossypii:243 P.kodakaraensis:554

Q755X4              	100.00%		Q5JJ31              	100.00%
Bootstrap support for Q755X4 as seed ortholog is 99%.
Bootstrap support for Q5JJ31 as seed ortholog is 100%.

Group of orthologs #7. Best score 528 bits
Score difference with first non-orthologous sequence - A.gossypii:528 P.kodakaraensis:528

Q74ZS3              	100.00%		Q5JDX6              	100.00%
Bootstrap support for Q74ZS3 as seed ortholog is 100%.
Bootstrap support for Q5JDX6 as seed ortholog is 100%.

Group of orthologs #8. Best score 517 bits
Score difference with first non-orthologous sequence - A.gossypii:517 P.kodakaraensis:517

Q751L7              	100.00%		Q5JGF1              	100.00%
Bootstrap support for Q751L7 as seed ortholog is 100%.
Bootstrap support for Q5JGF1 as seed ortholog is 100%.

Group of orthologs #9. Best score 457 bits
Score difference with first non-orthologous sequence - A.gossypii:191 P.kodakaraensis:457

P41752              	100.00%		Q5JFZ4              	100.00%
Bootstrap support for P41752 as seed ortholog is 99%.
Bootstrap support for Q5JFZ4 as seed ortholog is 100%.

Group of orthologs #10. Best score 445 bits
Score difference with first non-orthologous sequence - A.gossypii:445 P.kodakaraensis:360

Q756H2              	100.00%		Q5JEV6              	100.00%
Bootstrap support for Q756H2 as seed ortholog is 100%.
Bootstrap support for Q5JEV6 as seed ortholog is 100%.

Group of orthologs #11. Best score 426 bits
Score difference with first non-orthologous sequence - A.gossypii:426 P.kodakaraensis:426

Q752T8              	100.00%		Q9YGB0              	100.00%
Bootstrap support for Q752T8 as seed ortholog is 100%.
Bootstrap support for Q9YGB0 as seed ortholog is 100%.

Group of orthologs #12. Best score 423 bits
Score difference with first non-orthologous sequence - A.gossypii:302 P.kodakaraensis:423

Q75F16              	100.00%		Q8NKR7              	100.00%
Bootstrap support for Q75F16 as seed ortholog is 100%.
Bootstrap support for Q8NKR7 as seed ortholog is 100%.

Group of orthologs #13. Best score 417 bits
Score difference with first non-orthologous sequence - A.gossypii:71 P.kodakaraensis:417

Q75C31              	100.00%		Q5JDF4              	100.00%
Bootstrap support for Q75C31 as seed ortholog is 81%.
Bootstrap support for Q5JDF4 as seed ortholog is 100%.

Group of orthologs #14. Best score 410 bits
Score difference with first non-orthologous sequence - A.gossypii:410 P.kodakaraensis:410

Q74ZJ9              	100.00%		Q5JIP3              	100.00%
Bootstrap support for Q74ZJ9 as seed ortholog is 100%.
Bootstrap support for Q5JIP3 as seed ortholog is 100%.

Group of orthologs #15. Best score 395 bits
Score difference with first non-orthologous sequence - A.gossypii:27 P.kodakaraensis:395

Q74Z89              	100.00%		Q52500              	100.00%
                    	       		P61111              	72.07%
Bootstrap support for Q74Z89 as seed ortholog is 72%.
Alternative seed ortholog is Q753A6 (27 bits away from this cluster)
Bootstrap support for Q52500 as seed ortholog is 100%.

Group of orthologs #16. Best score 388 bits
Score difference with first non-orthologous sequence - A.gossypii:388 P.kodakaraensis:324

Q75DQ3              	100.00%		Q5JH71              	100.00%
Bootstrap support for Q75DQ3 as seed ortholog is 100%.
Bootstrap support for Q5JH71 as seed ortholog is 100%.

Group of orthologs #17. Best score 378 bits
Score difference with first non-orthologous sequence - A.gossypii:246 P.kodakaraensis:378

Q74Z74              	100.00%		Q5JDZ7              	100.00%
Bootstrap support for Q74Z74 as seed ortholog is 100%.
Bootstrap support for Q5JDZ7 as seed ortholog is 100%.

Group of orthologs #18. Best score 378 bits
Score difference with first non-orthologous sequence - A.gossypii:378 P.kodakaraensis:378

Q75BD7              	100.00%		Q5JID8              	100.00%
Bootstrap support for Q75BD7 as seed ortholog is 100%.
Bootstrap support for Q5JID8 as seed ortholog is 100%.

Group of orthologs #19. Best score 370 bits
Score difference with first non-orthologous sequence - A.gossypii:156 P.kodakaraensis:370

Q754C8              	100.00%		Q5JFZ3              	100.00%
Q754P1              	8.78%		
Bootstrap support for Q754C8 as seed ortholog is 98%.
Bootstrap support for Q5JFZ3 as seed ortholog is 100%.

Group of orthologs #20. Best score 358 bits
Score difference with first non-orthologous sequence - A.gossypii:7 P.kodakaraensis:358

Q75FB3              	100.00%		Q5JJA2              	100.00%
Bootstrap support for Q75FB3 as seed ortholog is 50%.
Alternative seed ortholog is Q74ZW9 (7 bits away from this cluster)
Bootstrap support for Q5JJA2 as seed ortholog is 100%.

Group of orthologs #21. Best score 357 bits
Score difference with first non-orthologous sequence - A.gossypii:1 P.kodakaraensis:357

Q750R1              	100.00%		Q5JGE5              	100.00%
Bootstrap support for Q750R1 as seed ortholog is 48%.
Alternative seed ortholog is Q755G5 (1 bits away from this cluster)
Bootstrap support for Q5JGE5 as seed ortholog is 100%.

Group of orthologs #22. Best score 353 bits
Score difference with first non-orthologous sequence - A.gossypii:4 P.kodakaraensis:240

Q750J4              	100.00%		Q5JHS5              	100.00%
Q757M5              	100.00%		
Bootstrap support for Q750J4 as seed ortholog is 42%.
Alternative seed ortholog is Q75F41 (4 bits away from this cluster)
Bootstrap support for Q757M5 as seed ortholog is 56%.
Alternative seed ortholog is Q75F41 (4 bits away from this cluster)
Bootstrap support for Q5JHS5 as seed ortholog is 100%.

Group of orthologs #23. Best score 348 bits
Score difference with first non-orthologous sequence - A.gossypii:43 P.kodakaraensis:348

Q75AE3              	100.00%		Q5JIT1              	100.00%
Bootstrap support for Q75AE3 as seed ortholog is 77%.
Bootstrap support for Q5JIT1 as seed ortholog is 100%.

Group of orthologs #24. Best score 343 bits
Score difference with first non-orthologous sequence - A.gossypii:202 P.kodakaraensis:343

Q75D48              	100.00%		Q5JDL3              	100.00%
Bootstrap support for Q75D48 as seed ortholog is 100%.
Bootstrap support for Q5JDL3 as seed ortholog is 100%.

Group of orthologs #25. Best score 328 bits
Score difference with first non-orthologous sequence - A.gossypii:328 P.kodakaraensis:328

Q753T3              	100.00%		Q5JED2              	100.00%
Bootstrap support for Q753T3 as seed ortholog is 100%.
Bootstrap support for Q5JED2 as seed ortholog is 100%.

Group of orthologs #26. Best score 324 bits
Score difference with first non-orthologous sequence - A.gossypii:324 P.kodakaraensis:324

Q75A13              	100.00%		Q5JEP3              	100.00%
Bootstrap support for Q75A13 as seed ortholog is 100%.
Bootstrap support for Q5JEP3 as seed ortholog is 100%.

Group of orthologs #27. Best score 321 bits
Score difference with first non-orthologous sequence - A.gossypii:321 P.kodakaraensis:321

Q75EN8              	100.00%		Q5JJC8              	100.00%
Bootstrap support for Q75EN8 as seed ortholog is 100%.
Bootstrap support for Q5JJC8 as seed ortholog is 100%.

Group of orthologs #28. Best score 312 bits
Score difference with first non-orthologous sequence - A.gossypii:136 P.kodakaraensis:312

Q75EP5              	100.00%		Q5JGN7              	100.00%
Bootstrap support for Q75EP5 as seed ortholog is 97%.
Bootstrap support for Q5JGN7 as seed ortholog is 100%.

Group of orthologs #29. Best score 308 bits
Score difference with first non-orthologous sequence - A.gossypii:308 P.kodakaraensis:308

Q75DA2              	100.00%		Q5JFR1              	100.00%
Bootstrap support for Q75DA2 as seed ortholog is 100%.
Bootstrap support for Q5JFR1 as seed ortholog is 100%.

Group of orthologs #30. Best score 301 bits
Score difference with first non-orthologous sequence - A.gossypii:229 P.kodakaraensis:301

Q75CI8              	100.00%		O93623              	100.00%
Bootstrap support for Q75CI8 as seed ortholog is 100%.
Bootstrap support for O93623 as seed ortholog is 100%.

Group of orthologs #31. Best score 301 bits
Score difference with first non-orthologous sequence - A.gossypii:301 P.kodakaraensis:301

Q75ED6              	100.00%		Q5JIF8              	100.00%
Bootstrap support for Q75ED6 as seed ortholog is 100%.
Bootstrap support for Q5JIF8 as seed ortholog is 100%.

Group of orthologs #32. Best score 298 bits
Score difference with first non-orthologous sequence - A.gossypii:298 P.kodakaraensis:298

Q756B7              	100.00%		Q5JFM1              	100.00%
Bootstrap support for Q756B7 as seed ortholog is 100%.
Bootstrap support for Q5JFM1 as seed ortholog is 100%.

Group of orthologs #33. Best score 291 bits
Score difference with first non-orthologous sequence - A.gossypii:92 P.kodakaraensis:291

Q75DW1              	100.00%		Q5JE75              	100.00%
Bootstrap support for Q75DW1 as seed ortholog is 98%.
Bootstrap support for Q5JE75 as seed ortholog is 100%.

Group of orthologs #34. Best score 286 bits
Score difference with first non-orthologous sequence - A.gossypii:286 P.kodakaraensis:286

Q759A9              	100.00%		Q76I93              	100.00%
Bootstrap support for Q759A9 as seed ortholog is 100%.
Bootstrap support for Q76I93 as seed ortholog is 100%.

Group of orthologs #35. Best score 281 bits
Score difference with first non-orthologous sequence - A.gossypii:281 P.kodakaraensis:281

Q757N3              	100.00%		Q5JF49              	100.00%
Bootstrap support for Q757N3 as seed ortholog is 100%.
Bootstrap support for Q5JF49 as seed ortholog is 100%.

Group of orthologs #36. Best score 281 bits
Score difference with first non-orthologous sequence - A.gossypii:143 P.kodakaraensis:210

Q75AF7              	100.00%		Q52428              	100.00%
Bootstrap support for Q75AF7 as seed ortholog is 99%.
Bootstrap support for Q52428 as seed ortholog is 100%.

Group of orthologs #37. Best score 279 bits
Score difference with first non-orthologous sequence - A.gossypii:279 P.kodakaraensis:185

Q74ZU7              	100.00%		Q5JET4              	100.00%
Q75BP5              	6.99%		
Bootstrap support for Q74ZU7 as seed ortholog is 100%.
Bootstrap support for Q5JET4 as seed ortholog is 100%.

Group of orthologs #38. Best score 279 bits
Score difference with first non-orthologous sequence - A.gossypii:93 P.kodakaraensis:279

Q757N2              	100.00%		Q5JHC1              	100.00%
Bootstrap support for Q757N2 as seed ortholog is 98%.
Bootstrap support for Q5JHC1 as seed ortholog is 100%.

Group of orthologs #39. Best score 265 bits
Score difference with first non-orthologous sequence - A.gossypii:265 P.kodakaraensis:265

Q758Q3              	100.00%		Q5JIA4              	100.00%
Bootstrap support for Q758Q3 as seed ortholog is 100%.
Bootstrap support for Q5JIA4 as seed ortholog is 100%.

Group of orthologs #40. Best score 265 bits
Score difference with first non-orthologous sequence - A.gossypii:265 P.kodakaraensis:265

Q75EU2              	100.00%		Q5JJE8              	100.00%
Bootstrap support for Q75EU2 as seed ortholog is 100%.
Bootstrap support for Q5JJE8 as seed ortholog is 100%.

Group of orthologs #41. Best score 260 bits
Score difference with first non-orthologous sequence - A.gossypii:260 P.kodakaraensis:260

Q752H7              	100.00%		Q5JJH1              	100.00%
Bootstrap support for Q752H7 as seed ortholog is 100%.
Bootstrap support for Q5JJH1 as seed ortholog is 100%.

Group of orthologs #42. Best score 260 bits
Score difference with first non-orthologous sequence - A.gossypii:260 P.kodakaraensis:260

Q75EW4              	100.00%		Q5JEY0              	100.00%
Bootstrap support for Q75EW4 as seed ortholog is 100%.
Bootstrap support for Q5JEY0 as seed ortholog is 100%.

Group of orthologs #43. Best score 259 bits
Score difference with first non-orthologous sequence - A.gossypii:259 P.kodakaraensis:259

Q75CS4              	100.00%		Q9HHC4              	100.00%
Bootstrap support for Q75CS4 as seed ortholog is 100%.
Bootstrap support for Q9HHC4 as seed ortholog is 100%.

Group of orthologs #44. Best score 256 bits
Score difference with first non-orthologous sequence - A.gossypii:256 P.kodakaraensis:256

Q757I5              	100.00%		Q5JGK6              	100.00%
Bootstrap support for Q757I5 as seed ortholog is 100%.
Bootstrap support for Q5JGK6 as seed ortholog is 100%.

Group of orthologs #45. Best score 255 bits
Score difference with first non-orthologous sequence - A.gossypii:150 P.kodakaraensis:255

Q758R9              	100.00%		Q5JEW3              	100.00%
Bootstrap support for Q758R9 as seed ortholog is 99%.
Bootstrap support for Q5JEW3 as seed ortholog is 100%.

Group of orthologs #46. Best score 253 bits
Score difference with first non-orthologous sequence - A.gossypii:253 P.kodakaraensis:253

Q75CL7              	100.00%		Q5JFK3              	100.00%
Bootstrap support for Q75CL7 as seed ortholog is 100%.
Bootstrap support for Q5JFK3 as seed ortholog is 100%.

Group of orthologs #47. Best score 253 bits
Score difference with first non-orthologous sequence - A.gossypii:253 P.kodakaraensis:253

Q75F08              	100.00%		Q5JF13              	100.00%
Bootstrap support for Q75F08 as seed ortholog is 100%.
Bootstrap support for Q5JF13 as seed ortholog is 100%.

Group of orthologs #48. Best score 252 bits
Score difference with first non-orthologous sequence - A.gossypii:7 P.kodakaraensis:252

Q74ZE0              	100.00%		Q5JH16              	100.00%
Bootstrap support for Q74ZE0 as seed ortholog is 51%.
Alternative seed ortholog is Q753P8 (7 bits away from this cluster)
Bootstrap support for Q5JH16 as seed ortholog is 100%.

Group of orthologs #49. Best score 249 bits
Score difference with first non-orthologous sequence - A.gossypii:100 P.kodakaraensis:249

Q75DS8              	100.00%		Q5JGN0              	100.00%
Bootstrap support for Q75DS8 as seed ortholog is 99%.
Bootstrap support for Q5JGN0 as seed ortholog is 100%.

Group of orthologs #50. Best score 246 bits
Score difference with first non-orthologous sequence - A.gossypii:14 P.kodakaraensis:246

Q75BL8              	100.00%		Q5JFZ6              	100.00%
Q755W0              	36.62%		
Q75BS4              	8.35%		
Bootstrap support for Q75BL8 as seed ortholog is 36%.
Alternative seed ortholog is Q755A5 (14 bits away from this cluster)
Bootstrap support for Q5JFZ6 as seed ortholog is 100%.

Group of orthologs #51. Best score 240 bits
Score difference with first non-orthologous sequence - A.gossypii:240 P.kodakaraensis:240

Q75D13              	100.00%		Q9YGB3              	100.00%
Bootstrap support for Q75D13 as seed ortholog is 100%.
Bootstrap support for Q9YGB3 as seed ortholog is 100%.

Group of orthologs #52. Best score 237 bits
Score difference with first non-orthologous sequence - A.gossypii:237 P.kodakaraensis:237

Q75BW6              	100.00%		Q5JJ43              	100.00%
Q75AI4              	43.25%		
Bootstrap support for Q75BW6 as seed ortholog is 100%.
Bootstrap support for Q5JJ43 as seed ortholog is 100%.

Group of orthologs #53. Best score 237 bits
Score difference with first non-orthologous sequence - A.gossypii:161 P.kodakaraensis:237

Q752D6              	100.00%		Q5JD45              	100.00%
Bootstrap support for Q752D6 as seed ortholog is 99%.
Bootstrap support for Q5JD45 as seed ortholog is 100%.

Group of orthologs #54. Best score 236 bits
Score difference with first non-orthologous sequence - A.gossypii:174 P.kodakaraensis:236

Q75F62              	100.00%		Q5JGQ7              	100.00%
Q759A5              	29.58%		
Bootstrap support for Q75F62 as seed ortholog is 99%.
Bootstrap support for Q5JGQ7 as seed ortholog is 100%.

Group of orthologs #55. Best score 234 bits
Score difference with first non-orthologous sequence - A.gossypii:234 P.kodakaraensis:234

Q75B59              	100.00%		Q5JFT4              	100.00%
Bootstrap support for Q75B59 as seed ortholog is 100%.
Bootstrap support for Q5JFT4 as seed ortholog is 100%.

Group of orthologs #56. Best score 232 bits
Score difference with first non-orthologous sequence - A.gossypii:232 P.kodakaraensis:152

Q754H4              	100.00%		Q5JI16              	100.00%
Bootstrap support for Q754H4 as seed ortholog is 100%.
Bootstrap support for Q5JI16 as seed ortholog is 99%.

Group of orthologs #57. Best score 230 bits
Score difference with first non-orthologous sequence - A.gossypii:230 P.kodakaraensis:230

Q751N1              	100.00%		Q5JFN4              	100.00%
Bootstrap support for Q751N1 as seed ortholog is 100%.
Bootstrap support for Q5JFN4 as seed ortholog is 100%.

Group of orthologs #58. Best score 223 bits
Score difference with first non-orthologous sequence - A.gossypii:223 P.kodakaraensis:97

Q75BR1              	100.00%		Q5JDF6              	100.00%
Bootstrap support for Q75BR1 as seed ortholog is 100%.
Bootstrap support for Q5JDF6 as seed ortholog is 98%.

Group of orthologs #59. Best score 220 bits
Score difference with first non-orthologous sequence - A.gossypii:220 P.kodakaraensis:220

Q759R7              	100.00%		Q5JDJ0              	100.00%
Bootstrap support for Q759R7 as seed ortholog is 100%.
Bootstrap support for Q5JDJ0 as seed ortholog is 100%.

Group of orthologs #60. Best score 220 bits
Score difference with first non-orthologous sequence - A.gossypii:220 P.kodakaraensis:220

Q759B4              	100.00%		Q5JIL7              	100.00%
Bootstrap support for Q759B4 as seed ortholog is 100%.
Bootstrap support for Q5JIL7 as seed ortholog is 100%.

Group of orthologs #61. Best score 220 bits
Score difference with first non-orthologous sequence - A.gossypii:25 P.kodakaraensis:220

Q75DX7              	100.00%		Q5JHP3              	100.00%
Bootstrap support for Q75DX7 as seed ortholog is 74%.
Alternative seed ortholog is Q74ZS1 (25 bits away from this cluster)
Bootstrap support for Q5JHP3 as seed ortholog is 100%.

Group of orthologs #62. Best score 216 bits
Score difference with first non-orthologous sequence - A.gossypii:216 P.kodakaraensis:216

Q74Z60              	100.00%		Q5JHC6              	100.00%
Bootstrap support for Q74Z60 as seed ortholog is 100%.
Bootstrap support for Q5JHC6 as seed ortholog is 100%.

Group of orthologs #63. Best score 215 bits
Score difference with first non-orthologous sequence - A.gossypii:215 P.kodakaraensis:215

Q755M0              	100.00%		Q5JGH7              	100.00%
Bootstrap support for Q755M0 as seed ortholog is 100%.
Bootstrap support for Q5JGH7 as seed ortholog is 100%.

Group of orthologs #64. Best score 213 bits
Score difference with first non-orthologous sequence - A.gossypii:213 P.kodakaraensis:213

Q75BQ2              	100.00%		Q76KA7              	100.00%
Bootstrap support for Q75BQ2 as seed ortholog is 100%.
Bootstrap support for Q76KA7 as seed ortholog is 100%.

Group of orthologs #65. Best score 212 bits
Score difference with first non-orthologous sequence - A.gossypii:77 P.kodakaraensis:89

Q75CF2              	100.00%		Q5JGC4              	100.00%
                    	       		Q5JEZ2              	9.60%
Bootstrap support for Q75CF2 as seed ortholog is 99%.
Bootstrap support for Q5JGC4 as seed ortholog is 99%.

Group of orthologs #66. Best score 212 bits
Score difference with first non-orthologous sequence - A.gossypii:107 P.kodakaraensis:212

Q75AA7              	100.00%		Q5JJ98              	100.00%
Bootstrap support for Q75AA7 as seed ortholog is 99%.
Bootstrap support for Q5JJ98 as seed ortholog is 100%.

Group of orthologs #67. Best score 210 bits
Score difference with first non-orthologous sequence - A.gossypii:210 P.kodakaraensis:210

Q74ZK6              	100.00%		Q5JGF4              	100.00%
Bootstrap support for Q74ZK6 as seed ortholog is 100%.
Bootstrap support for Q5JGF4 as seed ortholog is 100%.

Group of orthologs #68. Best score 208 bits
Score difference with first non-orthologous sequence - A.gossypii:161 P.kodakaraensis:208

Q752Q7              	100.00%		Q76KA8              	100.00%
Bootstrap support for Q752Q7 as seed ortholog is 99%.
Bootstrap support for Q76KA8 as seed ortholog is 100%.

Group of orthologs #69. Best score 208 bits
Score difference with first non-orthologous sequence - A.gossypii:59 P.kodakaraensis:208

Q758U3              	100.00%		Q5JH48              	100.00%
Bootstrap support for Q758U3 as seed ortholog is 91%.
Bootstrap support for Q5JH48 as seed ortholog is 100%.

Group of orthologs #70. Best score 207 bits
Score difference with first non-orthologous sequence - A.gossypii:132 P.kodakaraensis:207

Q75AW1              	100.00%		Q5JFW3              	100.00%
Bootstrap support for Q75AW1 as seed ortholog is 99%.
Bootstrap support for Q5JFW3 as seed ortholog is 100%.

Group of orthologs #71. Best score 206 bits
Score difference with first non-orthologous sequence - A.gossypii:206 P.kodakaraensis:206

Q754E7              	100.00%		Q5JFE7              	100.00%
Bootstrap support for Q754E7 as seed ortholog is 100%.
Bootstrap support for Q5JFE7 as seed ortholog is 100%.

Group of orthologs #72. Best score 205 bits
Score difference with first non-orthologous sequence - A.gossypii:146 P.kodakaraensis:205

Q75A20              	100.00%		Q5JFV5              	100.00%
Bootstrap support for Q75A20 as seed ortholog is 99%.
Bootstrap support for Q5JFV5 as seed ortholog is 100%.

Group of orthologs #73. Best score 204 bits
Score difference with first non-orthologous sequence - A.gossypii:118 P.kodakaraensis:204

Q75AP7              	100.00%		Q5JDH2              	100.00%
Bootstrap support for Q75AP7 as seed ortholog is 99%.
Bootstrap support for Q5JDH2 as seed ortholog is 100%.

Group of orthologs #74. Best score 204 bits
Score difference with first non-orthologous sequence - A.gossypii:123 P.kodakaraensis:204

Q75CQ5              	100.00%		Q5JD92              	100.00%
Bootstrap support for Q75CQ5 as seed ortholog is 99%.
Bootstrap support for Q5JD92 as seed ortholog is 100%.

Group of orthologs #75. Best score 203 bits
Score difference with first non-orthologous sequence - A.gossypii:58 P.kodakaraensis:203

Q758W1              	100.00%		Q5JG59              	100.00%
Q75CG3              	55.24%		
Q755L5              	21.95%		
Q757K5              	10.97%		
Bootstrap support for Q758W1 as seed ortholog is 90%.
Bootstrap support for Q5JG59 as seed ortholog is 100%.

Group of orthologs #76. Best score 203 bits
Score difference with first non-orthologous sequence - A.gossypii:203 P.kodakaraensis:203

Q74ZC0              	100.00%		Q5JH24              	100.00%
Bootstrap support for Q74ZC0 as seed ortholog is 100%.
Bootstrap support for Q5JH24 as seed ortholog is 100%.

Group of orthologs #77. Best score 201 bits
Score difference with first non-orthologous sequence - A.gossypii:201 P.kodakaraensis:201

Q751B3              	100.00%		Q5JE24              	100.00%
Bootstrap support for Q751B3 as seed ortholog is 100%.
Bootstrap support for Q5JE24 as seed ortholog is 100%.

Group of orthologs #78. Best score 199 bits
Score difference with first non-orthologous sequence - A.gossypii:199 P.kodakaraensis:199

Q757Q0              	100.00%		Q5JIG7              	100.00%
Bootstrap support for Q757Q0 as seed ortholog is 100%.
Bootstrap support for Q5JIG7 as seed ortholog is 100%.

Group of orthologs #79. Best score 198 bits
Score difference with first non-orthologous sequence - A.gossypii:26 P.kodakaraensis:198

Q75AY4              	100.00%		Q5JFV8              	100.00%
Bootstrap support for Q75AY4 as seed ortholog is 75%.
Bootstrap support for Q5JFV8 as seed ortholog is 100%.

Group of orthologs #80. Best score 198 bits
Score difference with first non-orthologous sequence - A.gossypii:198 P.kodakaraensis:198

Q75E56              	100.00%		Q5JIE6              	100.00%
Bootstrap support for Q75E56 as seed ortholog is 100%.
Bootstrap support for Q5JIE6 as seed ortholog is 100%.

Group of orthologs #81. Best score 196 bits
Score difference with first non-orthologous sequence - A.gossypii:102 P.kodakaraensis:196

Q756Z1              	100.00%		Q5JGG6              	100.00%
                    	       		Q5JEW1              	15.25%
Bootstrap support for Q756Z1 as seed ortholog is 98%.
Bootstrap support for Q5JGG6 as seed ortholog is 100%.

Group of orthologs #82. Best score 195 bits
Score difference with first non-orthologous sequence - A.gossypii:195 P.kodakaraensis:195

Q75D37              	100.00%		Q5JCY6              	100.00%
Bootstrap support for Q75D37 as seed ortholog is 100%.
Bootstrap support for Q5JCY6 as seed ortholog is 100%.

Group of orthologs #83. Best score 192 bits
Score difference with first non-orthologous sequence - A.gossypii:192 P.kodakaraensis:192

Q753I4              	100.00%		Q5JFN0              	100.00%
Q75CR3              	25.10%		
Bootstrap support for Q753I4 as seed ortholog is 100%.
Bootstrap support for Q5JFN0 as seed ortholog is 100%.

Group of orthologs #84. Best score 192 bits
Score difference with first non-orthologous sequence - A.gossypii:192 P.kodakaraensis:192

Q750W4              	100.00%		Q5JH37              	100.00%
Bootstrap support for Q750W4 as seed ortholog is 100%.
Bootstrap support for Q5JH37 as seed ortholog is 100%.

Group of orthologs #85. Best score 191 bits
Score difference with first non-orthologous sequence - A.gossypii:10 P.kodakaraensis:191

Q753J4              	100.00%		Q5JIU9              	100.00%
Bootstrap support for Q753J4 as seed ortholog is 59%.
Alternative seed ortholog is Q75ER7 (10 bits away from this cluster)
Bootstrap support for Q5JIU9 as seed ortholog is 100%.

Group of orthologs #86. Best score 191 bits
Score difference with first non-orthologous sequence - A.gossypii:134 P.kodakaraensis:191

Q75DM3              	100.00%		Q5JF38              	100.00%
Bootstrap support for Q75DM3 as seed ortholog is 99%.
Bootstrap support for Q5JF38 as seed ortholog is 100%.

Group of orthologs #87. Best score 188 bits
Score difference with first non-orthologous sequence - A.gossypii:188 P.kodakaraensis:188

Q75B31              	100.00%		Q5JI15              	100.00%
Bootstrap support for Q75B31 as seed ortholog is 100%.
Bootstrap support for Q5JI15 as seed ortholog is 100%.

Group of orthologs #88. Best score 187 bits
Score difference with first non-orthologous sequence - A.gossypii:187 P.kodakaraensis:127

Q75CM8              	100.00%		Q5JIK4              	100.00%
Bootstrap support for Q75CM8 as seed ortholog is 100%.
Bootstrap support for Q5JIK4 as seed ortholog is 99%.

Group of orthologs #89. Best score 182 bits
Score difference with first non-orthologous sequence - A.gossypii:182 P.kodakaraensis:69

Q75AC3              	100.00%		Q5JDD8              	100.00%
Q754X6              	15.71%		
Bootstrap support for Q75AC3 as seed ortholog is 100%.
Bootstrap support for Q5JDD8 as seed ortholog is 98%.

Group of orthologs #90. Best score 180 bits
Score difference with first non-orthologous sequence - A.gossypii:180 P.kodakaraensis:180

Q755T1              	100.00%		Q5JDV8              	100.00%
                    	       		Q5JIM8              	7.69%
Bootstrap support for Q755T1 as seed ortholog is 100%.
Bootstrap support for Q5JDV8 as seed ortholog is 100%.

Group of orthologs #91. Best score 180 bits
Score difference with first non-orthologous sequence - A.gossypii:180 P.kodakaraensis:180

Q753S2              	100.00%		Q5JFP1              	100.00%
Bootstrap support for Q753S2 as seed ortholog is 100%.
Bootstrap support for Q5JFP1 as seed ortholog is 100%.

Group of orthologs #92. Best score 180 bits
Score difference with first non-orthologous sequence - A.gossypii:180 P.kodakaraensis:180

Q758E0              	100.00%		Q5JJF3              	100.00%
Bootstrap support for Q758E0 as seed ortholog is 100%.
Bootstrap support for Q5JJF3 as seed ortholog is 100%.

Group of orthologs #93. Best score 180 bits
Score difference with first non-orthologous sequence - A.gossypii:180 P.kodakaraensis:180

Q75F07              	100.00%		Q5JF74              	100.00%
Bootstrap support for Q75F07 as seed ortholog is 100%.
Bootstrap support for Q5JF74 as seed ortholog is 100%.

Group of orthologs #94. Best score 178 bits
Score difference with first non-orthologous sequence - A.gossypii:178 P.kodakaraensis:178

Q75BQ6              	100.00%		Q5JF06              	100.00%
Q758F0              	50.85%		
Bootstrap support for Q75BQ6 as seed ortholog is 100%.
Bootstrap support for Q5JF06 as seed ortholog is 100%.

Group of orthologs #95. Best score 178 bits
Score difference with first non-orthologous sequence - A.gossypii:111 P.kodakaraensis:178

Q75EI1              	100.00%		Q5JF43              	100.00%
Bootstrap support for Q75EI1 as seed ortholog is 99%.
Bootstrap support for Q5JF43 as seed ortholog is 100%.

Group of orthologs #96. Best score 175 bits
Score difference with first non-orthologous sequence - A.gossypii:105 P.kodakaraensis:56

Q752H4              	100.00%		Q5JI97              	100.00%
Bootstrap support for Q752H4 as seed ortholog is 99%.
Bootstrap support for Q5JI97 as seed ortholog is 91%.

Group of orthologs #97. Best score 175 bits
Score difference with first non-orthologous sequence - A.gossypii:175 P.kodakaraensis:175

Q75D95              	100.00%		Q5JIH2              	100.00%
Bootstrap support for Q75D95 as seed ortholog is 100%.
Bootstrap support for Q5JIH2 as seed ortholog is 100%.

Group of orthologs #98. Best score 174 bits
Score difference with first non-orthologous sequence - A.gossypii:174 P.kodakaraensis:174

Q75DX9              	100.00%		Q5JFV6              	100.00%
Bootstrap support for Q75DX9 as seed ortholog is 100%.
Bootstrap support for Q5JFV6 as seed ortholog is 100%.

Group of orthologs #99. Best score 174 bits
Score difference with first non-orthologous sequence - A.gossypii:174 P.kodakaraensis:174

Q75BT4              	100.00%		Q5JIM2              	100.00%
Bootstrap support for Q75BT4 as seed ortholog is 100%.
Bootstrap support for Q5JIM2 as seed ortholog is 100%.

Group of orthologs #100. Best score 172 bits
Score difference with first non-orthologous sequence - A.gossypii:172 P.kodakaraensis:172

Q75E89              	100.00%		Q5JDI0              	100.00%
Bootstrap support for Q75E89 as seed ortholog is 100%.
Bootstrap support for Q5JDI0 as seed ortholog is 100%.

Group of orthologs #101. Best score 171 bits
Score difference with first non-orthologous sequence - A.gossypii:171 P.kodakaraensis:171

Q75C94              	100.00%		Q5JEZ9              	100.00%
Q751Z2              	26.96%		
Bootstrap support for Q75C94 as seed ortholog is 100%.
Bootstrap support for Q5JEZ9 as seed ortholog is 100%.

Group of orthologs #102. Best score 170 bits
Score difference with first non-orthologous sequence - A.gossypii:170 P.kodakaraensis:170

Q74Z04              	100.00%		Q5JF76              	100.00%
Bootstrap support for Q74Z04 as seed ortholog is 100%.
Bootstrap support for Q5JF76 as seed ortholog is 100%.

Group of orthologs #103. Best score 170 bits
Score difference with first non-orthologous sequence - A.gossypii:170 P.kodakaraensis:170

Q755K6              	100.00%		P77933              	100.00%
Bootstrap support for Q755K6 as seed ortholog is 100%.
Bootstrap support for P77933 as seed ortholog is 100%.

Group of orthologs #104. Best score 170 bits
Score difference with first non-orthologous sequence - A.gossypii:170 P.kodakaraensis:170

Q753V8              	100.00%		Q5JH43              	100.00%
Bootstrap support for Q753V8 as seed ortholog is 100%.
Bootstrap support for Q5JH43 as seed ortholog is 100%.

Group of orthologs #105. Best score 168 bits
Score difference with first non-orthologous sequence - A.gossypii:168 P.kodakaraensis:109

Q758N0              	100.00%		Q5JES4              	100.00%
Bootstrap support for Q758N0 as seed ortholog is 100%.
Bootstrap support for Q5JES4 as seed ortholog is 99%.

Group of orthologs #106. Best score 166 bits
Score difference with first non-orthologous sequence - A.gossypii:166 P.kodakaraensis:166

Q758S7              	100.00%		Q5JJG1              	100.00%
Bootstrap support for Q758S7 as seed ortholog is 100%.
Bootstrap support for Q5JJG1 as seed ortholog is 100%.

Group of orthologs #107. Best score 164 bits
Score difference with first non-orthologous sequence - A.gossypii:80 P.kodakaraensis:164

Q75C64              	100.00%		Q5JFX8              	100.00%
Bootstrap support for Q75C64 as seed ortholog is 87%.
Bootstrap support for Q5JFX8 as seed ortholog is 100%.

Group of orthologs #108. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:163 P.kodakaraensis:163

Q754W3              	100.00%		Q5JFU8              	100.00%
Bootstrap support for Q754W3 as seed ortholog is 100%.
Bootstrap support for Q5JFU8 as seed ortholog is 100%.

Group of orthologs #109. Best score 163 bits
Score difference with first non-orthologous sequence - A.gossypii:93 P.kodakaraensis:163

Q75EH1              	100.00%		Q5JE20              	100.00%
Bootstrap support for Q75EH1 as seed ortholog is 99%.
Bootstrap support for Q5JE20 as seed ortholog is 100%.

Group of orthologs #110. Best score 162 bits
Score difference with first non-orthologous sequence - A.gossypii:81 P.kodakaraensis:162

Q751I9              	100.00%		Q5JGD1              	100.00%
Bootstrap support for Q751I9 as seed ortholog is 99%.
Bootstrap support for Q5JGD1 as seed ortholog is 100%.

Group of orthologs #111. Best score 162 bits
Score difference with first non-orthologous sequence - A.gossypii:162 P.kodakaraensis:162

Q75BA7              	100.00%		Q5JFG9              	100.00%
Bootstrap support for Q75BA7 as seed ortholog is 100%.
Bootstrap support for Q5JFG9 as seed ortholog is 100%.

Group of orthologs #112. Best score 161 bits
Score difference with first non-orthologous sequence - A.gossypii:161 P.kodakaraensis:161

Q75EA0              	100.00%		Q5JJG8              	100.00%
Bootstrap support for Q75EA0 as seed ortholog is 100%.
Bootstrap support for Q5JJG8 as seed ortholog is 100%.

Group of orthologs #113. Best score 159 bits
Score difference with first non-orthologous sequence - A.gossypii:159 P.kodakaraensis:159

Q754P8              	100.00%		Q5JEP5              	100.00%
Bootstrap support for Q754P8 as seed ortholog is 100%.
Bootstrap support for Q5JEP5 as seed ortholog is 100%.

Group of orthologs #114. Best score 158 bits
Score difference with first non-orthologous sequence - A.gossypii:158 P.kodakaraensis:158

Q74ZT4              	100.00%		Q5JH96              	100.00%
Bootstrap support for Q74ZT4 as seed ortholog is 100%.
Bootstrap support for Q5JH96 as seed ortholog is 100%.

Group of orthologs #115. Best score 156 bits
Score difference with first non-orthologous sequence - A.gossypii:28 P.kodakaraensis:156

Q74ZL1              	100.00%		Q5JH68              	100.00%
Bootstrap support for Q74ZL1 as seed ortholog is 83%.
Bootstrap support for Q5JH68 as seed ortholog is 100%.

Group of orthologs #116. Best score 156 bits
Score difference with first non-orthologous sequence - A.gossypii:156 P.kodakaraensis:156

Q75D52              	100.00%		Q5JE04              	100.00%
Bootstrap support for Q75D52 as seed ortholog is 100%.
Bootstrap support for Q5JE04 as seed ortholog is 100%.

Group of orthologs #117. Best score 155 bits
Score difference with first non-orthologous sequence - A.gossypii:88 P.kodakaraensis:155

Q75CQ9              	100.00%		Q5JJD2              	100.00%
Bootstrap support for Q75CQ9 as seed ortholog is 99%.
Bootstrap support for Q5JJD2 as seed ortholog is 100%.

Group of orthologs #118. Best score 150 bits
Score difference with first non-orthologous sequence - A.gossypii:150 P.kodakaraensis:150

Q75C90              	100.00%		Q5JI54              	100.00%
Bootstrap support for Q75C90 as seed ortholog is 100%.
Bootstrap support for Q5JI54 as seed ortholog is 100%.

Group of orthologs #119. Best score 149 bits
Score difference with first non-orthologous sequence - A.gossypii:149 P.kodakaraensis:149

Q756D2              	100.00%		Q5JJC6              	100.00%
Bootstrap support for Q756D2 as seed ortholog is 100%.
Bootstrap support for Q5JJC6 as seed ortholog is 100%.

Group of orthologs #120. Best score 147 bits
Score difference with first non-orthologous sequence - A.gossypii:147 P.kodakaraensis:147

Q750H0              	100.00%		Q5JDJ5              	100.00%
Bootstrap support for Q750H0 as seed ortholog is 100%.
Bootstrap support for Q5JDJ5 as seed ortholog is 100%.

Group of orthologs #121. Best score 145 bits
Score difference with first non-orthologous sequence - A.gossypii:145 P.kodakaraensis:145

Q753P1              	100.00%		Q5JFR0              	100.00%
Bootstrap support for Q753P1 as seed ortholog is 100%.
Bootstrap support for Q5JFR0 as seed ortholog is 100%.

Group of orthologs #122. Best score 145 bits
Score difference with first non-orthologous sequence - A.gossypii:145 P.kodakaraensis:145

Q75BG3              	100.00%		Q5JJG0              	100.00%
Bootstrap support for Q75BG3 as seed ortholog is 100%.
Bootstrap support for Q5JJG0 as seed ortholog is 100%.

Group of orthologs #123. Best score 143 bits
Score difference with first non-orthologous sequence - A.gossypii:143 P.kodakaraensis:143

Q758C2              	100.00%		Q5JF51              	100.00%
                    	       		Q5JHU0              	32.18%
Bootstrap support for Q758C2 as seed ortholog is 100%.
Bootstrap support for Q5JF51 as seed ortholog is 100%.

Group of orthologs #124. Best score 143 bits
Score difference with first non-orthologous sequence - A.gossypii:143 P.kodakaraensis:143

Q74ZY3              	100.00%		Q5JIB3              	100.00%
Bootstrap support for Q74ZY3 as seed ortholog is 100%.
Bootstrap support for Q5JIB3 as seed ortholog is 100%.

Group of orthologs #125. Best score 143 bits
Score difference with first non-orthologous sequence - A.gossypii:143 P.kodakaraensis:143

Q75CJ6              	100.00%		Q5JH26              	100.00%
Bootstrap support for Q75CJ6 as seed ortholog is 100%.
Bootstrap support for Q5JH26 as seed ortholog is 100%.

Group of orthologs #126. Best score 143 bits
Score difference with first non-orthologous sequence - A.gossypii:143 P.kodakaraensis:143

Q75DD1              	100.00%		Q5JGR7              	100.00%
Bootstrap support for Q75DD1 as seed ortholog is 100%.
Bootstrap support for Q5JGR7 as seed ortholog is 100%.

Group of orthologs #127. Best score 142 bits
Score difference with first non-orthologous sequence - A.gossypii:47 P.kodakaraensis:142

Q752M6              	100.00%		Q5JFM8              	100.00%
Q74ZN1              	35.97%		
Bootstrap support for Q752M6 as seed ortholog is 81%.
Bootstrap support for Q5JFM8 as seed ortholog is 100%.

Group of orthologs #128. Best score 141 bits
Score difference with first non-orthologous sequence - A.gossypii:141 P.kodakaraensis:141

Q757K9              	100.00%		Q5JGE1              	100.00%
Q75DN9              	6.39%		
Bootstrap support for Q757K9 as seed ortholog is 100%.
Bootstrap support for Q5JGE1 as seed ortholog is 100%.

Group of orthologs #129. Best score 141 bits
Score difference with first non-orthologous sequence - A.gossypii:141 P.kodakaraensis:57

Q75B26              	100.00%		Q5JFU6              	100.00%
Bootstrap support for Q75B26 as seed ortholog is 100%.
Bootstrap support for Q5JFU6 as seed ortholog is 95%.

Group of orthologs #130. Best score 141 bits
Score difference with first non-orthologous sequence - A.gossypii:82 P.kodakaraensis:141

Q75CU7              	100.00%		Q5JH36              	100.00%
Bootstrap support for Q75CU7 as seed ortholog is 99%.
Bootstrap support for Q5JH36 as seed ortholog is 100%.

Group of orthologs #131. Best score 139 bits
Score difference with first non-orthologous sequence - A.gossypii:139 P.kodakaraensis:139

Q750I1              	100.00%		Q5JGJ4              	100.00%
Bootstrap support for Q750I1 as seed ortholog is 100%.
Bootstrap support for Q5JGJ4 as seed ortholog is 100%.

Group of orthologs #132. Best score 139 bits
Score difference with first non-orthologous sequence - A.gossypii:43 P.kodakaraensis:139

Q75DM1              	100.00%		Q5JG47              	100.00%
Bootstrap support for Q75DM1 as seed ortholog is 85%.
Bootstrap support for Q5JG47 as seed ortholog is 100%.

Group of orthologs #133. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:91 P.kodakaraensis:67

Q74ZX3              	100.00%		Q5JE21              	100.00%
Bootstrap support for Q74ZX3 as seed ortholog is 98%.
Bootstrap support for Q5JE21 as seed ortholog is 93%.

Group of orthologs #134. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:138 P.kodakaraensis:138

Q75DA1              	100.00%		Q5JFR2              	100.00%
Bootstrap support for Q75DA1 as seed ortholog is 100%.
Bootstrap support for Q5JFR2 as seed ortholog is 100%.

Group of orthologs #135. Best score 138 bits
Score difference with first non-orthologous sequence - A.gossypii:138 P.kodakaraensis:138

Q75F76              	100.00%		Q5JF63              	100.00%
Bootstrap support for Q75F76 as seed ortholog is 100%.
Bootstrap support for Q5JF63 as seed ortholog is 100%.

Group of orthologs #136. Best score 137 bits
Score difference with first non-orthologous sequence - A.gossypii:137 P.kodakaraensis:137

Q752J5              	100.00%		Q5JJG3              	100.00%
Bootstrap support for Q752J5 as seed ortholog is 100%.
Bootstrap support for Q5JJG3 as seed ortholog is 100%.

Group of orthologs #137. Best score 136 bits
Score difference with first non-orthologous sequence - A.gossypii:136 P.kodakaraensis:136

Q75DA4              	100.00%		Q5JEM6              	100.00%
Bootstrap support for Q75DA4 as seed ortholog is 100%.
Bootstrap support for Q5JEM6 as seed ortholog is 100%.

Group of orthologs #138. Best score 134 bits
Score difference with first non-orthologous sequence - A.gossypii:134 P.kodakaraensis:134

Q752K1              	100.00%		Q5JFL7              	100.00%
Bootstrap support for Q752K1 as seed ortholog is 100%.
Bootstrap support for Q5JFL7 as seed ortholog is 100%.

Group of orthologs #139. Best score 132 bits
Score difference with first non-orthologous sequence - A.gossypii:132 P.kodakaraensis:132

Q752F4              	100.00%		Q5JGG5              	100.00%
Bootstrap support for Q752F4 as seed ortholog is 100%.
Bootstrap support for Q5JGG5 as seed ortholog is 100%.

Group of orthologs #140. Best score 132 bits
Score difference with first non-orthologous sequence - A.gossypii:34 P.kodakaraensis:132

Q752D9              	100.00%		Q5JHN1              	100.00%
Bootstrap support for Q752D9 as seed ortholog is 97%.
Bootstrap support for Q5JHN1 as seed ortholog is 100%.

Group of orthologs #141. Best score 132 bits
Score difference with first non-orthologous sequence - A.gossypii:132 P.kodakaraensis:132

Q75E36              	100.00%		Q5JHS7              	100.00%
Bootstrap support for Q75E36 as seed ortholog is 100%.
Bootstrap support for Q5JHS7 as seed ortholog is 100%.

Group of orthologs #142. Best score 131 bits
Score difference with first non-orthologous sequence - A.gossypii:131 P.kodakaraensis:131

Q75AE7              	100.00%		Q5JGT4              	100.00%
Bootstrap support for Q75AE7 as seed ortholog is 100%.
Bootstrap support for Q5JGT4 as seed ortholog is 100%.

Group of orthologs #143. Best score 130 bits
Score difference with first non-orthologous sequence - A.gossypii:130 P.kodakaraensis:130

Q75AB1              	100.00%		Q5JGN1              	100.00%
                    	       		P58109              	61.62%
Bootstrap support for Q75AB1 as seed ortholog is 100%.
Bootstrap support for Q5JGN1 as seed ortholog is 100%.

Group of orthologs #144. Best score 130 bits
Score difference with first non-orthologous sequence - A.gossypii:130 P.kodakaraensis:130

Q75BY4              	100.00%		Q5JDB6              	100.00%
Bootstrap support for Q75BY4 as seed ortholog is 100%.
Bootstrap support for Q5JDB6 as seed ortholog is 100%.

Group of orthologs #145. Best score 130 bits
Score difference with first non-orthologous sequence - A.gossypii:74 P.kodakaraensis:130

Q75F52              	100.00%		Q5JIR7              	100.00%
Bootstrap support for Q75F52 as seed ortholog is 98%.
Bootstrap support for Q5JIR7 as seed ortholog is 100%.

Group of orthologs #146. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:129 P.kodakaraensis:129

Q74ZR4              	100.00%		Q52366              	100.00%
Bootstrap support for Q74ZR4 as seed ortholog is 100%.
Bootstrap support for Q52366 as seed ortholog is 100%.

Group of orthologs #147. Best score 129 bits
Score difference with first non-orthologous sequence - A.gossypii:129 P.kodakaraensis:129

Q75E11              	100.00%		Q5JDH5              	100.00%
Bootstrap support for Q75E11 as seed ortholog is 100%.
Bootstrap support for Q5JDH5 as seed ortholog is 100%.

Group of orthologs #148. Best score 128 bits
Score difference with first non-orthologous sequence - A.gossypii:128 P.kodakaraensis:128

Q753K9              	100.00%		Q5JIA2              	100.00%
Bootstrap support for Q753K9 as seed ortholog is 100%.
Bootstrap support for Q5JIA2 as seed ortholog is 100%.

Group of orthologs #149. Best score 127 bits
Score difference with first non-orthologous sequence - A.gossypii:127 P.kodakaraensis:127

Q756S5              	100.00%		Q5JJG6              	100.00%
Bootstrap support for Q756S5 as seed ortholog is 100%.
Bootstrap support for Q5JJG6 as seed ortholog is 100%.

Group of orthologs #150. Best score 127 bits
Score difference with first non-orthologous sequence - A.gossypii:127 P.kodakaraensis:127

Q75B75              	100.00%		Q5JHP2              	100.00%
Bootstrap support for Q75B75 as seed ortholog is 100%.
Bootstrap support for Q5JHP2 as seed ortholog is 100%.

Group of orthologs #151. Best score 126 bits
Score difference with first non-orthologous sequence - A.gossypii:126 P.kodakaraensis:126

Q756J7              	100.00%		Q5JH79              	100.00%
Bootstrap support for Q756J7 as seed ortholog is 100%.
Bootstrap support for Q5JH79 as seed ortholog is 100%.

Group of orthologs #152. Best score 125 bits
Score difference with first non-orthologous sequence - A.gossypii:125 P.kodakaraensis:125

Q75BL5              	100.00%		Q5JE68              	100.00%
                    	       		Q5JHF7              	35.01%
Bootstrap support for Q75BL5 as seed ortholog is 100%.
Bootstrap support for Q5JE68 as seed ortholog is 100%.

Group of orthologs #153. Best score 124 bits
Score difference with first non-orthologous sequence - A.gossypii:124 P.kodakaraensis:124

Q759J2              	100.00%		Q5JIF4              	100.00%
Bootstrap support for Q759J2 as seed ortholog is 100%.
Bootstrap support for Q5JIF4 as seed ortholog is 100%.

Group of orthologs #154. Best score 123 bits
Score difference with first non-orthologous sequence - A.gossypii:123 P.kodakaraensis:123

Q74Z75              	100.00%		Q5JEZ6              	100.00%
Bootstrap support for Q74Z75 as seed ortholog is 100%.
Bootstrap support for Q5JEZ6 as seed ortholog is 100%.

Group of orthologs #155. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:34 P.kodakaraensis:121

Q74Z38              	100.00%		Q5JF30              	100.00%
Q75CW3              	17.75%		
Bootstrap support for Q74Z38 as seed ortholog is 88%.
Bootstrap support for Q5JF30 as seed ortholog is 100%.

Group of orthologs #156. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:76 P.kodakaraensis:121

Q752Y9              	100.00%		Q5JF69              	100.00%
Bootstrap support for Q752Y9 as seed ortholog is 85%.
Bootstrap support for Q5JF69 as seed ortholog is 100%.

Group of orthologs #157. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:53 P.kodakaraensis:121

Q757K8              	100.00%		Q76CZ2              	100.00%
Bootstrap support for Q757K8 as seed ortholog is 91%.
Bootstrap support for Q76CZ2 as seed ortholog is 100%.

Group of orthologs #158. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:44 P.kodakaraensis:121

Q758L6              	100.00%		Q5JJF2              	100.00%
Bootstrap support for Q758L6 as seed ortholog is 96%.
Bootstrap support for Q5JJF2 as seed ortholog is 100%.

Group of orthologs #159. Best score 121 bits
Score difference with first non-orthologous sequence - A.gossypii:121 P.kodakaraensis:121

Q75F65              	100.00%		Q5JD25              	100.00%
Bootstrap support for Q75F65 as seed ortholog is 100%.
Bootstrap support for Q5JD25 as seed ortholog is 100%.

Group of orthologs #160. Best score 120 bits
Score difference with first non-orthologous sequence - A.gossypii:120 P.kodakaraensis:120

Q750E3              	100.00%		Q5JIZ7              	100.00%
Q758B3              	7.56%		
Q750D4              	5.31%		
Bootstrap support for Q750E3 as seed ortholog is 100%.
Bootstrap support for Q5JIZ7 as seed ortholog is 100%.

Group of orthologs #161. Best score 120 bits
Score difference with first non-orthologous sequence - A.gossypii:120 P.kodakaraensis:120

Q75CA0              	100.00%		P58502              	100.00%
Bootstrap support for Q75CA0 as seed ortholog is 100%.
Bootstrap support for P58502 as seed ortholog is 100%.

Group of orthologs #162. Best score 120 bits
Score difference with first non-orthologous sequence - A.gossypii:120 P.kodakaraensis:120

Q75AZ9              	100.00%		Q5JET7              	100.00%
Bootstrap support for Q75AZ9 as seed ortholog is 100%.
Bootstrap support for Q5JET7 as seed ortholog is 100%.

Group of orthologs #163. Best score 120 bits
Score difference with first non-orthologous sequence - A.gossypii:72 P.kodakaraensis:120

Q756F0              	100.00%		Q5JJF1              	100.00%
Bootstrap support for Q756F0 as seed ortholog is 99%.
Bootstrap support for Q5JJF1 as seed ortholog is 100%.

Group of orthologs #164. Best score 120 bits
Score difference with first non-orthologous sequence - A.gossypii:120 P.kodakaraensis:120

Q75B62              	100.00%		Q5JJG4              	100.00%
Bootstrap support for Q75B62 as seed ortholog is 100%.
Bootstrap support for Q5JJG4 as seed ortholog is 100%.

Group of orthologs #165. Best score 120 bits
Score difference with first non-orthologous sequence - A.gossypii:36 P.kodakaraensis:120

Q75E54              	100.00%		Q5JJ45              	100.00%
Bootstrap support for Q75E54 as seed ortholog is 90%.
Bootstrap support for Q5JJ45 as seed ortholog is 100%.

Group of orthologs #166. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 P.kodakaraensis:119

Q759G2              	100.00%		O52958              	100.00%
Q757D0              	23.41%		
Q751A4              	22.89%		
Q74Z35              	21.46%		
Bootstrap support for Q759G2 as seed ortholog is 100%.
Bootstrap support for O52958 as seed ortholog is 100%.

Group of orthologs #167. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 P.kodakaraensis:57

Q75F36              	100.00%		Q5JGT2              	100.00%
                    	       		Q5JI45              	100.00%
Bootstrap support for Q75F36 as seed ortholog is 100%.
Bootstrap support for Q5JGT2 as seed ortholog is 93%.
Bootstrap support for Q5JI45 as seed ortholog is 93%.

Group of orthologs #168. Best score 119 bits
Score difference with first non-orthologous sequence - A.gossypii:119 P.kodakaraensis:119

Q758U5              	100.00%		Q5JDH3              	100.00%
Bootstrap support for Q758U5 as seed ortholog is 100%.
Bootstrap support for Q5JDH3 as seed ortholog is 100%.

Group of orthologs #169. Best score 118 bits
Score difference with first non-orthologous sequence - A.gossypii:59 P.kodakaraensis:118

Q751J4              	100.00%		Q5JJF8              	100.00%
Bootstrap support for Q751J4 as seed ortholog is 99%.
Bootstrap support for Q5JJF8 as seed ortholog is 100%.

Group of orthologs #170. Best score 116 bits
Score difference with first non-orthologous sequence - A.gossypii:116 P.kodakaraensis:116

Q759L8              	100.00%		Q5JJE2              	100.00%
Bootstrap support for Q759L8 as seed ortholog is 100%.
Bootstrap support for Q5JJE2 as seed ortholog is 100%.

Group of orthologs #171. Best score 115 bits
Score difference with first non-orthologous sequence - A.gossypii:115 P.kodakaraensis:115

Q75CF8              	100.00%		Q5JGC8              	100.00%
Q757A8              	19.26%		
Bootstrap support for Q75CF8 as seed ortholog is 100%.
Bootstrap support for Q5JGC8 as seed ortholog is 100%.

Group of orthologs #172. Best score 115 bits
Score difference with first non-orthologous sequence - A.gossypii:115 P.kodakaraensis:115

Q754T7              	100.00%		Q5JJ50              	100.00%
Bootstrap support for Q754T7 as seed ortholog is 100%.
Bootstrap support for Q5JJ50 as seed ortholog is 100%.

Group of orthologs #173. Best score 114 bits
Score difference with first non-orthologous sequence - A.gossypii:67 P.kodakaraensis:114

Q75C81              	100.00%		Q5JIR6              	100.00%
Bootstrap support for Q75C81 as seed ortholog is 98%.
Bootstrap support for Q5JIR6 as seed ortholog is 100%.

Group of orthologs #174. Best score 113 bits
Score difference with first non-orthologous sequence - A.gossypii:45 P.kodakaraensis:113

Q750E7              	100.00%		Q5JIB6              	100.00%
Bootstrap support for Q750E7 as seed ortholog is 86%.
Bootstrap support for Q5JIB6 as seed ortholog is 100%.

Group of orthologs #175. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 P.kodakaraensis:111

Q755W7              	100.00%		Q5JI09              	100.00%
Q75CM6              	11.41%		
Bootstrap support for Q755W7 as seed ortholog is 100%.
Bootstrap support for Q5JI09 as seed ortholog is 100%.

Group of orthologs #176. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 P.kodakaraensis:111

Q74ZF8              	100.00%		Q5JE49              	100.00%
Bootstrap support for Q74ZF8 as seed ortholog is 100%.
Bootstrap support for Q5JE49 as seed ortholog is 100%.

Group of orthologs #177. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 P.kodakaraensis:111

Q752V7              	100.00%		Q5JIT6              	100.00%
Bootstrap support for Q752V7 as seed ortholog is 100%.
Bootstrap support for Q5JIT6 as seed ortholog is 100%.

Group of orthologs #178. Best score 111 bits
Score difference with first non-orthologous sequence - A.gossypii:111 P.kodakaraensis:111

Q754M4              	100.00%		Q5JI38              	100.00%
Bootstrap support for Q754M4 as seed ortholog is 100%.
Bootstrap support for Q5JI38 as seed ortholog is 100%.

Group of orthologs #179. Best score 110 bits
Score difference with first non-orthologous sequence - A.gossypii:110 P.kodakaraensis:110

Q75C13              	100.00%		Q5JJG7              	100.00%
Bootstrap support for Q75C13 as seed ortholog is 100%.
Bootstrap support for Q5JJG7 as seed ortholog is 100%.

Group of orthologs #180. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:5 P.kodakaraensis:109

Q75CZ3              	100.00%		Q5JI69              	100.00%
Bootstrap support for Q75CZ3 as seed ortholog is 67%.
Alternative seed ortholog is Q75DQ0 (5 bits away from this cluster)
Bootstrap support for Q5JI69 as seed ortholog is 100%.

Group of orthologs #181. Best score 109 bits
Score difference with first non-orthologous sequence - A.gossypii:109 P.kodakaraensis:109

Q75ES9              	100.00%		Q5JIB9              	100.00%
Bootstrap support for Q75ES9 as seed ortholog is 100%.
Bootstrap support for Q5JIB9 as seed ortholog is 100%.

Group of orthologs #182. Best score 108 bits
Score difference with first non-orthologous sequence - A.gossypii:108 P.kodakaraensis:108

Q75CY7              	100.00%		Q5JDI6              	100.00%
Bootstrap support for Q75CY7 as seed ortholog is 100%.
Bootstrap support for Q5JDI6 as seed ortholog is 100%.

Group of orthologs #183. Best score 107 bits
Score difference with first non-orthologous sequence - A.gossypii:107 P.kodakaraensis:107

Q759U6              	100.00%		Q5JDS2              	100.00%
Q759Z6              	40.67%		
Bootstrap support for Q759U6 as seed ortholog is 100%.
Bootstrap support for Q5JDS2 as seed ortholog is 100%.

Group of orthologs #184. Best score 107 bits
Score difference with first non-orthologous sequence - A.gossypii:107 P.kodakaraensis:107

Q754X9              	100.00%		Q5JEW5              	100.00%
Bootstrap support for Q754X9 as seed ortholog is 100%.
Bootstrap support for Q5JEW5 as seed ortholog is 100%.

Group of orthologs #185. Best score 107 bits
Score difference with first non-orthologous sequence - A.gossypii:107 P.kodakaraensis:107

Q75DA8              	100.00%		Q5JI29              	100.00%
Bootstrap support for Q75DA8 as seed ortholog is 100%.
Bootstrap support for Q5JI29 as seed ortholog is 100%.

Group of orthologs #186. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:5 P.kodakaraensis:106

Q758F8              	100.00%		Q5JHP1              	100.00%
Q75A16              	19.63%		
Q753A2              	17.80%		
Bootstrap support for Q758F8 as seed ortholog is 53%.
Alternative seed ortholog is Q75DK2 (5 bits away from this cluster)
Bootstrap support for Q5JHP1 as seed ortholog is 100%.

Group of orthologs #187. Best score 106 bits
Score difference with first non-orthologous sequence - A.gossypii:24 P.kodakaraensis:106

Q758S8              	100.00%		Q5JDJ9              	100.00%
                    	       		Q5JHL8              	22.30%
Bootstrap support for Q758S8 as seed ortholog is 93%.
Bootstrap support for Q5JDJ9 as seed ortholog is 100%.

Group of orthologs #188. Best score 105 bits
Score difference with first non-orthologous sequence - A.gossypii:10 P.kodakaraensis:105

Q754J0              	100.00%		Q5JFM9              	100.00%
                    	       		Q5JDZ9              	5.76%
Bootstrap support for Q754J0 as seed ortholog is 56%.
Alternative seed ortholog is Q758S4 (10 bits away from this cluster)
Bootstrap support for Q5JFM9 as seed ortholog is 100%.

Group of orthologs #189. Best score 104 bits
Score difference with first non-orthologous sequence - A.gossypii:104 P.kodakaraensis:104

Q758Y2              	100.00%		Q5JFJ9              	100.00%
Bootstrap support for Q758Y2 as seed ortholog is 100%.
Bootstrap support for Q5JFJ9 as seed ortholog is 100%.

Group of orthologs #190. Best score 103 bits
Score difference with first non-orthologous sequence - A.gossypii:103 P.kodakaraensis:103

Q75CV0              	100.00%		Q5JJF9              	100.00%
Bootstrap support for Q75CV0 as seed ortholog is 100%.
Bootstrap support for Q5JJF9 as seed ortholog is 100%.

Group of orthologs #191. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:102 P.kodakaraensis:102

Q74Z49              	100.00%		Q5JIW4              	100.00%
                    	       		Q5JI77              	15.44%
Bootstrap support for Q74Z49 as seed ortholog is 100%.
Bootstrap support for Q5JIW4 as seed ortholog is 100%.

Group of orthologs #192. Best score 102 bits
Score difference with first non-orthologous sequence - A.gossypii:60 P.kodakaraensis:102

Q755D9              	100.00%		Q5JH35              	100.00%
Bootstrap support for Q755D9 as seed ortholog is 99%.
Bootstrap support for Q5JH35 as seed ortholog is 100%.

Group of orthologs #193. Best score 100 bits
Score difference with first non-orthologous sequence - A.gossypii:100 P.kodakaraensis:100

Q756M8              	100.00%		Q5JD52              	100.00%
Bootstrap support for Q756M8 as seed ortholog is 100%.
Bootstrap support for Q5JD52 as seed ortholog is 100%.

Group of orthologs #194. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 P.kodakaraensis:99

Q752Z9              	100.00%		Q5JEX8              	100.00%
Bootstrap support for Q752Z9 as seed ortholog is 100%.
Bootstrap support for Q5JEX8 as seed ortholog is 100%.

Group of orthologs #195. Best score 99 bits
Score difference with first non-orthologous sequence - A.gossypii:99 P.kodakaraensis:2

Q755F6              	100.00%		Q5JJ24              	100.00%
Bootstrap support for Q755F6 as seed ortholog is 100%.
Bootstrap support for Q5JJ24 as seed ortholog is 47%.
Alternative seed ortholog is Q5JCY5 (2 bits away from this cluster)

Group of orthologs #196. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:97 P.kodakaraensis:97

Q752M7              	100.00%		Q5JH18              	100.00%
Bootstrap support for Q752M7 as seed ortholog is 100%.
Bootstrap support for Q5JH18 as seed ortholog is 100%.

Group of orthologs #197. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:97 P.kodakaraensis:97

Q756Y3              	100.00%		Q5JGM4              	100.00%
Bootstrap support for Q756Y3 as seed ortholog is 100%.
Bootstrap support for Q5JGM4 as seed ortholog is 100%.

Group of orthologs #198. Best score 97 bits
Score difference with first non-orthologous sequence - A.gossypii:97 P.kodakaraensis:97

Q75EF1              	100.00%		Q5JIR1              	100.00%
Bootstrap support for Q75EF1 as seed ortholog is 100%.
Bootstrap support for Q5JIR1 as seed ortholog is 100%.

Group of orthologs #199. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 P.kodakaraensis:96

Q751Q9              	100.00%		Q5JI74              	100.00%
Bootstrap support for Q751Q9 as seed ortholog is 100%.
Bootstrap support for Q5JI74 as seed ortholog is 100%.

Group of orthologs #200. Best score 96 bits
Score difference with first non-orthologous sequence - A.gossypii:96 P.kodakaraensis:96

Q75B47              	100.00%		Q5JFT0              	100.00%
Bootstrap support for Q75B47 as seed ortholog is 100%.
Bootstrap support for Q5JFT0 as seed ortholog is 100%.

Group of orthologs #201. Best score 95 bits
Score difference with first non-orthologous sequence - A.gossypii:5 P.kodakaraensis:95

Q75B05              	100.00%		Q5JJF4              	100.00%
Bootstrap support for Q75B05 as seed ortholog is 56%.
Alternative seed ortholog is Q75A87 (5 bits away from this cluster)
Bootstrap support for Q5JJF4 as seed ortholog is 100%.

Group of orthologs #202. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 P.kodakaraensis:94

Q74ZG6              	100.00%		Q5JD35              	100.00%
Bootstrap support for Q74ZG6 as seed ortholog is 100%.
Bootstrap support for Q5JD35 as seed ortholog is 100%.

Group of orthologs #203. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 P.kodakaraensis:94

Q755F1              	100.00%		Q5JDW2              	100.00%
Bootstrap support for Q755F1 as seed ortholog is 100%.
Bootstrap support for Q5JDW2 as seed ortholog is 100%.

Group of orthologs #204. Best score 94 bits
Score difference with first non-orthologous sequence - A.gossypii:94 P.kodakaraensis:94

Q75AS8              	100.00%		Q5JGN5              	100.00%
Bootstrap support for Q75AS8 as seed ortholog is 100%.
Bootstrap support for Q5JGN5 as seed ortholog is 100%.

Group of orthologs #205. Best score 93 bits
Score difference with first non-orthologous sequence - A.gossypii:93 P.kodakaraensis:93

Q75AK8              	100.00%		Q5JFR6              	100.00%
Bootstrap support for Q75AK8 as seed ortholog is 100%.
Bootstrap support for Q5JFR6 as seed ortholog is 100%.

Group of orthologs #206. Best score 92 bits
Score difference with first non-orthologous sequence - A.gossypii:92 P.kodakaraensis:92

Q756A0              	100.00%		Q5JJF6              	100.00%
Bootstrap support for Q756A0 as seed ortholog is 100%.
Bootstrap support for Q5JJF6 as seed ortholog is 100%.

Group of orthologs #207. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 P.kodakaraensis:91

Q754Z5              	100.00%		Q5JEB7              	100.00%
Bootstrap support for Q754Z5 as seed ortholog is 100%.
Bootstrap support for Q5JEB7 as seed ortholog is 100%.

Group of orthologs #208. Best score 91 bits
Score difference with first non-orthologous sequence - A.gossypii:91 P.kodakaraensis:91

Q757Z7              	100.00%		Q5JDH4              	100.00%
Bootstrap support for Q757Z7 as seed ortholog is 100%.
Bootstrap support for Q5JDH4 as seed ortholog is 100%.

Group of orthologs #209. Best score 90 bits
Score difference with first non-orthologous sequence - A.gossypii:90 P.kodakaraensis:90

Q75B81              	100.00%		Q5JF32              	100.00%
                    	       		Q5JFD3              	45.90%
Bootstrap support for Q75B81 as seed ortholog is 100%.
Bootstrap support for Q5JF32 as seed ortholog is 100%.

Group of orthologs #210. Best score 90 bits
Score difference with first non-orthologous sequence - A.gossypii:90 P.kodakaraensis:50

Q75CV6              	100.00%		Q5JEU9              	100.00%
Bootstrap support for Q75CV6 as seed ortholog is 100%.
Bootstrap support for Q5JEU9 as seed ortholog is 92%.

Group of orthologs #211. Best score 90 bits
Score difference with first non-orthologous sequence - A.gossypii:42 P.kodakaraensis:90

Q75CD7              	100.00%		Q5JH42              	100.00%
Bootstrap support for Q75CD7 as seed ortholog is 89%.
Bootstrap support for Q5JH42 as seed ortholog is 100%.

Group of orthologs #212. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:89 P.kodakaraensis:89

Q755F3              	100.00%		Q5JJB4              	100.00%
Bootstrap support for Q755F3 as seed ortholog is 100%.
Bootstrap support for Q5JJB4 as seed ortholog is 100%.

Group of orthologs #213. Best score 89 bits
Score difference with first non-orthologous sequence - A.gossypii:28 P.kodakaraensis:89

Q756N6              	100.00%		Q5JJ91              	100.00%
Bootstrap support for Q756N6 as seed ortholog is 73%.
Alternative seed ortholog is Q757B5 (28 bits away from this cluster)
Bootstrap support for Q5JJ91 as seed ortholog is 100%.

Group of orthologs #214. Best score 88 bits
Score difference with first non-orthologous sequence - A.gossypii:88 P.kodakaraensis:88

Q750F7              	100.00%		Q5JI92              	100.00%
Bootstrap support for Q750F7 as seed ortholog is 100%.
Bootstrap support for Q5JI92 as seed ortholog is 100%.

Group of orthologs #215. Best score 88 bits
Score difference with first non-orthologous sequence - A.gossypii:88 P.kodakaraensis:88

Q751P5              	100.00%		Q5JHE8              	100.00%
Bootstrap support for Q751P5 as seed ortholog is 100%.
Bootstrap support for Q5JHE8 as seed ortholog is 100%.

Group of orthologs #216. Best score 88 bits
Score difference with first non-orthologous sequence - A.gossypii:4 P.kodakaraensis:88

Q75DY8              	100.00%		Q5JGR3              	100.00%
Bootstrap support for Q75DY8 as seed ortholog is 54%.
Alternative seed ortholog is Q757T2 (4 bits away from this cluster)
Bootstrap support for Q5JGR3 as seed ortholog is 100%.

Group of orthologs #217. Best score 88 bits
Score difference with first non-orthologous sequence - A.gossypii:88 P.kodakaraensis:88

Q75DV3              	100.00%		Q5JIS3              	100.00%
Bootstrap support for Q75DV3 as seed ortholog is 100%.
Bootstrap support for Q5JIS3 as seed ortholog is 100%.

Group of orthologs #218. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 P.kodakaraensis:87

Q74Z11              	100.00%		Q5JD31              	100.00%
Bootstrap support for Q74Z11 as seed ortholog is 100%.
Bootstrap support for Q5JD31 as seed ortholog is 100%.

Group of orthologs #219. Best score 87 bits
Score difference with first non-orthologous sequence - A.gossypii:87 P.kodakaraensis:87

Q74ZF7              	100.00%		Q5JJC3              	100.00%
Bootstrap support for Q74ZF7 as seed ortholog is 100%.
Bootstrap support for Q5JJC3 as seed ortholog is 100%.

Group of orthologs #220. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:19 P.kodakaraensis:86

Q75CE5              	100.00%		Q68BJ6              	100.00%
                    	       		Q68BJ7              	33.01%
                    	       		Q6I7B6              	29.20%
Bootstrap support for Q75CE5 as seed ortholog is 57%.
Alternative seed ortholog is Q75DP6 (19 bits away from this cluster)
Bootstrap support for Q68BJ6 as seed ortholog is 100%.

Group of orthologs #221. Best score 86 bits
Score difference with first non-orthologous sequence - A.gossypii:3 P.kodakaraensis:86

Q753Q6              	100.00%		Q5JIA1              	100.00%
Bootstrap support for Q753Q6 as seed ortholog is 53%.
Alternative seed ortholog is Q75F45 (3 bits away from this cluster)
Bootstrap support for Q5JIA1 as seed ortholog is 100%.

Group of orthologs #222. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:1 P.kodakaraensis:85

Q75DB1              	100.00%		Q5JJE5              	100.00%
Q75CX5              	77.11%		
Q75DB2              	75.66%		
Q75CX6              	57.35%		
Q75BV0              	31.08%		
Bootstrap support for Q75DB1 as seed ortholog is 48%.
Alternative seed ortholog is Q755Z4 (1 bits away from this cluster)
Bootstrap support for Q5JJE5 as seed ortholog is 100%.

Group of orthologs #223. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 P.kodakaraensis:85

Q754A0              	100.00%		Q5JFI2              	100.00%
Q74Z12              	43.38%		
Q75BA6              	9.46%		
Bootstrap support for Q754A0 as seed ortholog is 100%.
Bootstrap support for Q5JFI2 as seed ortholog is 100%.

Group of orthologs #224. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 P.kodakaraensis:85

Q752F5              	100.00%		Q5JET2              	100.00%
Bootstrap support for Q752F5 as seed ortholog is 100%.
Bootstrap support for Q5JET2 as seed ortholog is 100%.

Group of orthologs #225. Best score 85 bits
Score difference with first non-orthologous sequence - A.gossypii:85 P.kodakaraensis:85

Q75CE1              	100.00%		Q5JHR7              	100.00%
Bootstrap support for Q75CE1 as seed ortholog is 100%.
Bootstrap support for Q5JHR7 as seed ortholog is 100%.

Group of orthologs #226. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:84 P.kodakaraensis:84

Q756A4              	100.00%		O74035              	100.00%
Bootstrap support for Q756A4 as seed ortholog is 100%.
Bootstrap support for O74035 as seed ortholog is 100%.

Group of orthologs #227. Best score 84 bits
Score difference with first non-orthologous sequence - A.gossypii:16 P.kodakaraensis:84

Q75EE7              	100.00%		Q5JH34              	100.00%
Bootstrap support for Q75EE7 as seed ortholog is 74%.
Alternative seed ortholog is Q75E17 (16 bits away from this cluster)
Bootstrap support for Q5JH34 as seed ortholog is 100%.

Group of orthologs #228. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:83 P.kodakaraensis:21

Q752R1              	100.00%		Q5JFZ8              	100.00%
Q74ZK4              	100.00%		Q5JJB9              	100.00%
                    	       		Q5JGP4              	21.96%
Bootstrap support for Q752R1 as seed ortholog is 100%.
Bootstrap support for Q74ZK4 as seed ortholog is 100%.
Bootstrap support for Q5JFZ8 as seed ortholog is 65%.
Alternative seed ortholog is Q5JIW7 (21 bits away from this cluster)
Bootstrap support for Q5JJB9 as seed ortholog is 84%.

Group of orthologs #229. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:83 P.kodakaraensis:83

Q75DI4              	100.00%		Q5JFZ5              	100.00%
Bootstrap support for Q75DI4 as seed ortholog is 100%.
Bootstrap support for Q5JFZ5 as seed ortholog is 100%.

Group of orthologs #230. Best score 83 bits
Score difference with first non-orthologous sequence - A.gossypii:83 P.kodakaraensis:83

Q75EW2              	100.00%		Q5JIR5              	100.00%
Bootstrap support for Q75EW2 as seed ortholog is 100%.
Bootstrap support for Q5JIR5 as seed ortholog is 100%.

Group of orthologs #231. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 P.kodakaraensis:82

Q751I7              	100.00%		Q5JJG5              	100.00%
Bootstrap support for Q751I7 as seed ortholog is 100%.
Bootstrap support for Q5JJG5 as seed ortholog is 100%.

Group of orthologs #232. Best score 82 bits
Score difference with first non-orthologous sequence - A.gossypii:82 P.kodakaraensis:82

Q752T2              	100.00%		Q5JJ26              	100.00%
Bootstrap support for Q752T2 as seed ortholog is 100%.
Bootstrap support for Q5JJ26 as seed ortholog is 100%.

Group of orthologs #233. Best score 81 bits
Score difference with first non-orthologous sequence - A.gossypii:81 P.kodakaraensis:81

Q750Z9              	100.00%		Q5JGC7              	100.00%
Bootstrap support for Q750Z9 as seed ortholog is 100%.
Bootstrap support for Q5JGC7 as seed ortholog is 100%.

Group of orthologs #234. Best score 80 bits
Score difference with first non-orthologous sequence - A.gossypii:80 P.kodakaraensis:80

Q757T3              	100.00%		Q5JI34              	100.00%
Q751T7              	13.05%		
Bootstrap support for Q757T3 as seed ortholog is 100%.
Bootstrap support for Q5JI34 as seed ortholog is 100%.

Group of orthologs #235. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 P.kodakaraensis:79

Q756M0              	100.00%		Q5JGQ4              	100.00%
Q757W1              	100.00%		Q5JGQ5              	100.00%
Q75EZ1              	19.69%		Q5JIE2              	10.34%
Bootstrap support for Q756M0 as seed ortholog is 100%.
Bootstrap support for Q757W1 as seed ortholog is 100%.
Bootstrap support for Q5JGQ4 as seed ortholog is 100%.
Bootstrap support for Q5JGQ5 as seed ortholog is 100%.

Group of orthologs #236. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 P.kodakaraensis:79

Q75D12              	100.00%		Q5JDB8              	100.00%
Bootstrap support for Q75D12 as seed ortholog is 100%.
Bootstrap support for Q5JDB8 as seed ortholog is 100%.

Group of orthologs #237. Best score 79 bits
Score difference with first non-orthologous sequence - A.gossypii:79 P.kodakaraensis:79

Q75CR9              	100.00%		Q5JG26              	100.00%
Bootstrap support for Q75CR9 as seed ortholog is 100%.
Bootstrap support for Q5JG26 as seed ortholog is 100%.

Group of orthologs #238. Best score 78 bits
Score difference with first non-orthologous sequence - A.gossypii:78 P.kodakaraensis:78

Q756N3              	100.00%		Q5JFN5              	100.00%
                    	       		Q5JD27              	8.91%
Bootstrap support for Q756N3 as seed ortholog is 100%.
Bootstrap support for Q5JFN5 as seed ortholog is 100%.

Group of orthologs #239. Best score 78 bits
Score difference with first non-orthologous sequence - A.gossypii:78 P.kodakaraensis:78

Q759V7              	100.00%		Q5JFK1              	100.00%
Q753L0              	14.80%		
Bootstrap support for Q759V7 as seed ortholog is 100%.
Bootstrap support for Q5JFK1 as seed ortholog is 100%.

Group of orthologs #240. Best score 78 bits
Score difference with first non-orthologous sequence - A.gossypii:78 P.kodakaraensis:78

Q755M8              	100.00%		Q5JGS7              	100.00%
Bootstrap support for Q755M8 as seed ortholog is 100%.
Bootstrap support for Q5JGS7 as seed ortholog is 100%.

Group of orthologs #241. Best score 78 bits
Score difference with first non-orthologous sequence - A.gossypii:78 P.kodakaraensis:78

Q75DW4              	100.00%		Q5JDH9              	100.00%
Bootstrap support for Q75DW4 as seed ortholog is 100%.
Bootstrap support for Q5JDH9 as seed ortholog is 100%.

Group of orthologs #242. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 P.kodakaraensis:77

Q751L1              	100.00%		Q5JDM6              	100.00%
Bootstrap support for Q751L1 as seed ortholog is 100%.
Bootstrap support for Q5JDM6 as seed ortholog is 100%.

Group of orthologs #243. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 P.kodakaraensis:77

Q759B9              	100.00%		Q5JDS0              	100.00%
Bootstrap support for Q759B9 as seed ortholog is 100%.
Bootstrap support for Q5JDS0 as seed ortholog is 100%.

Group of orthologs #244. Best score 77 bits
Score difference with first non-orthologous sequence - A.gossypii:77 P.kodakaraensis:77

Q75F96              	100.00%		Q5JIV0              	100.00%
Bootstrap support for Q75F96 as seed ortholog is 100%.
Bootstrap support for Q5JIV0 as seed ortholog is 100%.

Group of orthologs #245. Best score 76 bits
Score difference with first non-orthologous sequence - A.gossypii:76 P.kodakaraensis:76

Q757J8              	100.00%		Q5JIY3              	100.00%
Q756H8              	33.20%		
Bootstrap support for Q757J8 as seed ortholog is 100%.
Bootstrap support for Q5JIY3 as seed ortholog is 100%.

Group of orthologs #246. Best score 75 bits
Score difference with first non-orthologous sequence - A.gossypii:75 P.kodakaraensis:75

Q751Y9              	100.00%		Q5JI44              	100.00%
Bootstrap support for Q751Y9 as seed ortholog is 100%.
Bootstrap support for Q5JI44 as seed ortholog is 100%.

Group of orthologs #247. Best score 74 bits
Score difference with first non-orthologous sequence - A.gossypii:74 P.kodakaraensis:74

Q75C47              	100.00%		Q5JH53              	100.00%
Bootstrap support for Q75C47 as seed ortholog is 100%.
Bootstrap support for Q5JH53 as seed ortholog is 100%.

Group of orthologs #248. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:28 P.kodakaraensis:72

Q750C6              	100.00%		Q5JF34              	100.00%
Bootstrap support for Q750C6 as seed ortholog is 85%.
Bootstrap support for Q5JF34 as seed ortholog is 100%.

Group of orthologs #249. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 P.kodakaraensis:72

Q751H0              	100.00%		Q5JI88              	100.00%
Bootstrap support for Q751H0 as seed ortholog is 100%.
Bootstrap support for Q5JI88 as seed ortholog is 100%.

Group of orthologs #250. Best score 72 bits
Score difference with first non-orthologous sequence - A.gossypii:72 P.kodakaraensis:72

Q754M0              	100.00%		Q5JGQ6              	100.00%
Bootstrap support for Q754M0 as seed ortholog is 100%.
Bootstrap support for Q5JGQ6 as seed ortholog is 100%.

Group of orthologs #251. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:15 P.kodakaraensis:71

Q75BN9              	100.00%		Q5JHM0              	100.00%
                    	       		Q5JJC2              	16.74%
Bootstrap support for Q75BN9 as seed ortholog is 65%.
Alternative seed ortholog is Q751S7 (15 bits away from this cluster)
Bootstrap support for Q5JHM0 as seed ortholog is 100%.

Group of orthologs #252. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 P.kodakaraensis:71

Q74ZD8              	100.00%		Q5JGR4              	100.00%
Bootstrap support for Q74ZD8 as seed ortholog is 100%.
Bootstrap support for Q5JGR4 as seed ortholog is 100%.

Group of orthologs #253. Best score 71 bits
Score difference with first non-orthologous sequence - A.gossypii:71 P.kodakaraensis:71

Q75BV8              	100.00%		Q5JJC9              	100.00%
Bootstrap support for Q75BV8 as seed ortholog is 100%.
Bootstrap support for Q5JJC9 as seed ortholog is 100%.

Group of orthologs #254. Best score 70 bits
Score difference with first non-orthologous sequence - A.gossypii:70 P.kodakaraensis:70

Q75CC4              	100.00%		Q5JIQ0              	100.00%
Bootstrap support for Q75CC4 as seed ortholog is 100%.
Bootstrap support for Q5JIQ0 as seed ortholog is 100%.

Group of orthologs #255. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:20 P.kodakaraensis:69

Q75AD5              	100.00%		Q5JDZ1              	100.00%
Bootstrap support for Q75AD5 as seed ortholog is 77%.
Bootstrap support for Q5JDZ1 as seed ortholog is 100%.

Group of orthologs #256. Best score 69 bits
Score difference with first non-orthologous sequence - A.gossypii:69 P.kodakaraensis:69

Q756H6              	100.00%		Q5JHF4              	100.00%
Bootstrap support for Q756H6 as seed ortholog is 100%.
Bootstrap support for Q5JHF4 as seed ortholog is 100%.

Group of orthologs #257. Best score 68 bits
Score difference with first non-orthologous sequence - A.gossypii:68 P.kodakaraensis:68

Q754B8              	100.00%		Q5JH77              	100.00%
                    	       		Q5JIG9              	10.69%
                    	       		Q5JF59              	10.69%
                    	       		Q5JFJ1              	10.47%
                    	       		Q5JG56              	10.47%
                    	       		Q5JEB0              	10.02%
                    	       		Q5JDD9              	10.02%
                    	       		Q5JJ54              	9.80%
                    	       		Q5JGV1              	9.58%
                    	       		Q5JIN8              	9.35%
                    	       		Q5JIB0              	8.91%
                    	       		Q5JG78              	8.69%
                    	       		Q5JDQ2              	8.69%
                    	       		Q5JIG1              	8.24%
                    	       		Q5JCX0              	7.80%
                    	       		Q5JHL7              	7.57%
                    	       		Q5JJ95              	6.90%
                    	       		Q5JHD4              	6.68%
                    	       		Q5JDA7              	6.46%
                    	       		Q5JG06              	6.46%
                    	       		Q5JGD3              	6.46%
                    	       		Q5JDD3              	5.79%
                    	       		Q5JE43              	5.79%
                    	       		Q5JG38              	5.57%
                    	       		Q5JEP9              	5.35%
                    	       		Q5JEM4              	5.35%
                    	       		Q5JHJ6              	5.35%
Bootstrap support for Q754B8 as seed ortholog is 100%.
Bootstrap support for Q5JH77 as seed ortholog is 100%.

Group of orthologs #258. Best score 68 bits
Score difference with first non-orthologous sequence - A.gossypii:68 P.kodakaraensis:68

Q753E7              	100.00%		Q5JH21              	100.00%
Bootstrap support for Q753E7 as seed ortholog is 100%.
Bootstrap support for Q5JH21 as seed ortholog is 100%.

Group of orthologs #259. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 P.kodakaraensis:67

Q752L4              	100.00%		Q5JFK7              	100.00%
Bootstrap support for Q752L4 as seed ortholog is 100%.
Bootstrap support for Q5JFK7 as seed ortholog is 100%.

Group of orthologs #260. Best score 67 bits
Score difference with first non-orthologous sequence - A.gossypii:67 P.kodakaraensis:67

Q753F8              	100.00%		Q5JI42              	100.00%
Bootstrap support for Q753F8 as seed ortholog is 100%.
Bootstrap support for Q5JI42 as seed ortholog is 100%.

Group of orthologs #261. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 P.kodakaraensis:66

Q750X5              	100.00%		Q5JIX8              	100.00%
Bootstrap support for Q750X5 as seed ortholog is 100%.
Bootstrap support for Q5JIX8 as seed ortholog is 100%.

Group of orthologs #262. Best score 66 bits
Score difference with first non-orthologous sequence - A.gossypii:66 P.kodakaraensis:66

Q75EG9              	100.00%		Q5JHH1              	100.00%
Bootstrap support for Q75EG9 as seed ortholog is 100%.
Bootstrap support for Q5JHH1 as seed ortholog is 100%.

Group of orthologs #263. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:65 P.kodakaraensis:65

Q75AY5              	100.00%		Q5JDP5              	100.00%
                    	       		Q5JDB4              	16.81%
                    	       		Q5JCY9              	9.12%
Bootstrap support for Q75AY5 as seed ortholog is 100%.
Bootstrap support for Q5JDP5 as seed ortholog is 100%.

Group of orthologs #264. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:65 P.kodakaraensis:65

Q75D50              	100.00%		Q5JHY3              	100.00%
                    	       		Q5JII8              	32.56%
Bootstrap support for Q75D50 as seed ortholog is 100%.
Bootstrap support for Q5JHY3 as seed ortholog is 100%.

Group of orthologs #265. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:65 P.kodakaraensis:65

Q752U5              	100.00%		Q5JE35              	100.00%
Bootstrap support for Q752U5 as seed ortholog is 100%.
Bootstrap support for Q5JE35 as seed ortholog is 100%.

Group of orthologs #266. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:11 P.kodakaraensis:65

Q75B80              	100.00%		Q5JHP6              	100.00%
Bootstrap support for Q75B80 as seed ortholog is 67%.
Alternative seed ortholog is Q75A80 (11 bits away from this cluster)
Bootstrap support for Q5JHP6 as seed ortholog is 100%.

Group of orthologs #267. Best score 65 bits
Score difference with first non-orthologous sequence - A.gossypii:65 P.kodakaraensis:65

Q75ES1              	100.00%		Q5JJ61              	100.00%
Bootstrap support for Q75ES1 as seed ortholog is 100%.
Bootstrap support for Q5JJ61 as seed ortholog is 100%.

Group of orthologs #268. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 P.kodakaraensis:64

Q753J9              	100.00%		Q5JCX7              	100.00%
Q75AR1              	44.65%		Q5JGS4              	30.14%
Bootstrap support for Q753J9 as seed ortholog is 100%.
Bootstrap support for Q5JCX7 as seed ortholog is 100%.

Group of orthologs #269. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 P.kodakaraensis:64

Q750J6              	100.00%		Q5JFK6              	100.00%
                    	       		Q5JES6              	25.60%
Bootstrap support for Q750J6 as seed ortholog is 100%.
Bootstrap support for Q5JFK6 as seed ortholog is 100%.

Group of orthologs #270. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:19 P.kodakaraensis:64

Q75D62              	100.00%		Q5JDG9              	100.00%
Bootstrap support for Q75D62 as seed ortholog is 64%.
Alternative seed ortholog is Q752F0 (19 bits away from this cluster)
Bootstrap support for Q5JDG9 as seed ortholog is 100%.

Group of orthologs #271. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:8 P.kodakaraensis:64

Q75C67              	100.00%		Q5JIY4              	100.00%
Bootstrap support for Q75C67 as seed ortholog is 55%.
Alternative seed ortholog is Q753Q2 (8 bits away from this cluster)
Bootstrap support for Q5JIY4 as seed ortholog is 100%.

Group of orthologs #272. Best score 64 bits
Score difference with first non-orthologous sequence - A.gossypii:64 P.kodakaraensis:64

Q75EX2              	100.00%		Q5JGC2              	100.00%
Bootstrap support for Q75EX2 as seed ortholog is 100%.
Bootstrap support for Q5JGC2 as seed ortholog is 100%.

Group of orthologs #273. Best score 63 bits
Score difference with first non-orthologous sequence - A.gossypii:63 P.kodakaraensis:63

Q74ZL6              	100.00%		Q5JIB2              	100.00%
Bootstrap support for Q74ZL6 as seed ortholog is 100%.
Bootstrap support for Q5JIB2 as seed ortholog is 100%.

Group of orthologs #274. Best score 63 bits
Score difference with first non-orthologous sequence - A.gossypii:63 P.kodakaraensis:63

Q754V6              	100.00%		Q5JJH0              	100.00%
Bootstrap support for Q754V6 as seed ortholog is 100%.
Bootstrap support for Q5JJH0 as seed ortholog is 100%.

Group of orthologs #275. Best score 63 bits
Score difference with first non-orthologous sequence - A.gossypii:63 P.kodakaraensis:63

Q75AA8              	100.00%		Q5JHT3              	100.00%
Bootstrap support for Q75AA8 as seed ortholog is 100%.
Bootstrap support for Q5JHT3 as seed ortholog is 100%.

Group of orthologs #276. Best score 62 bits
Score difference with first non-orthologous sequence - A.gossypii:62 P.kodakaraensis:62

Q75AL3              	100.00%		Q5JH52              	100.00%
Bootstrap support for Q75AL3 as seed ortholog is 100%.
Bootstrap support for Q5JH52 as seed ortholog is 100%.

Group of orthologs #277. Best score 60 bits
Score difference with first non-orthologous sequence - A.gossypii:60 P.kodakaraensis:60

Q759W4              	100.00%		Q5JDG1              	100.00%
Bootstrap support for Q759W4 as seed ortholog is 100%.
Bootstrap support for Q5JDG1 as seed ortholog is 100%.

Group of orthologs #278. Best score 59 bits
Score difference with first non-orthologous sequence - A.gossypii:59 P.kodakaraensis:59

Q75BB9              	100.00%		Q5JIE3              	100.00%
Bootstrap support for Q75BB9 as seed ortholog is 100%.
Bootstrap support for Q5JIE3 as seed ortholog is 100%.

Group of orthologs #279. Best score 58 bits
Score difference with first non-orthologous sequence - A.gossypii:58 P.kodakaraensis:58

Q74ZK5              	100.00%		Q5JDV0              	100.00%
Q75CU1              	9.97%		
Q75B35              	5.70%		
Bootstrap support for Q74ZK5 as seed ortholog is 100%.
Bootstrap support for Q5JDV0 as seed ortholog is 100%.

Group of orthologs #280. Best score 58 bits
Score difference with first non-orthologous sequence - A.gossypii:58 P.kodakaraensis:58

Q755N8              	100.00%		Q5JI98              	100.00%
Bootstrap support for Q755N8 as seed ortholog is 100%.
Bootstrap support for Q5JI98 as seed ortholog is 100%.

Group of orthologs #281. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 P.kodakaraensis:57

Q751Y7              	100.00%		Q5JIE1              	100.00%
Bootstrap support for Q751Y7 as seed ortholog is 100%.
Bootstrap support for Q5JIE1 as seed ortholog is 100%.

Group of orthologs #282. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 P.kodakaraensis:57

Q756I6              	100.00%		Q5JH78              	100.00%
Bootstrap support for Q756I6 as seed ortholog is 100%.
Bootstrap support for Q5JH78 as seed ortholog is 100%.

Group of orthologs #283. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 P.kodakaraensis:57

Q757G1              	100.00%		Q5JJG2              	100.00%
Bootstrap support for Q757G1 as seed ortholog is 100%.
Bootstrap support for Q5JJG2 as seed ortholog is 100%.

Group of orthologs #284. Best score 57 bits
Score difference with first non-orthologous sequence - A.gossypii:57 P.kodakaraensis:57

Q75EB0              	100.00%		Q5JFW9              	100.00%
Bootstrap support for Q75EB0 as seed ortholog is 100%.
Bootstrap support for Q5JFW9 as seed ortholog is 100%.

Group of orthologs #285. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 P.kodakaraensis:56

Q754B3              	100.00%		Q5JI19              	100.00%
Q75EY1              	100.00%		Q5JIU7              	19.10%
Bootstrap support for Q754B3 as seed ortholog is 100%.
Bootstrap support for Q75EY1 as seed ortholog is 100%.
Bootstrap support for Q5JI19 as seed ortholog is 100%.

Group of orthologs #286. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 P.kodakaraensis:56

Q758D8              	100.00%		Q5JGT6              	100.00%
Bootstrap support for Q758D8 as seed ortholog is 100%.
Bootstrap support for Q5JGT6 as seed ortholog is 100%.

Group of orthologs #287. Best score 56 bits
Score difference with first non-orthologous sequence - A.gossypii:56 P.kodakaraensis:56

Q75BC3              	100.00%		Q5JFL6              	100.00%
Bootstrap support for Q75BC3 as seed ortholog is 100%.
Bootstrap support for Q5JFL6 as seed ortholog is 100%.

Group of orthologs #288. Best score 55 bits
Score difference with first non-orthologous sequence - A.gossypii:55 P.kodakaraensis:55

Q755A7              	100.00%		Q5JJG9              	100.00%
Q75ET5              	14.18%		
Bootstrap support for Q755A7 as seed ortholog is 100%.
Bootstrap support for Q5JJG9 as seed ortholog is 100%.

Group of orthologs #289. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 P.kodakaraensis:54

Q753C6              	100.00%		Q5JH80              	100.00%
Bootstrap support for Q753C6 as seed ortholog is 100%.
Bootstrap support for Q5JH80 as seed ortholog is 100%.

Group of orthologs #290. Best score 54 bits
Score difference with first non-orthologous sequence - A.gossypii:54 P.kodakaraensis:54

Q8J1F7              	100.00%		Q5JFK8              	100.00%
Bootstrap support for Q8J1F7 as seed ortholog is 100%.
Bootstrap support for Q5JFK8 as seed ortholog is 100%.

Group of orthologs #291. Best score 53 bits
Score difference with first non-orthologous sequence - A.gossypii:53 P.kodakaraensis:53

Q75C62              	100.00%		Q8NKS4              	100.00%
Q75AL4              	18.82%		Q5JJ90              	12.12%
Q752Y4              	16.20%		
Bootstrap support for Q75C62 as seed ortholog is 100%.
Bootstrap support for Q8NKS4 as seed ortholog is 100%.

Group of orthologs #292. Best score 53 bits
Score difference with first non-orthologous sequence - A.gossypii:53 P.kodakaraensis:53

Q75CG2              	100.00%		Q5JIY8              	100.00%
Bootstrap support for Q75CG2 as seed ortholog is 100%.
Bootstrap support for Q5JIY8 as seed ortholog is 100%.

Group of orthologs #293. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 P.kodakaraensis:52

Q754S1              	100.00%		Q5JIE4              	100.00%
                    	       		Q5JJ05              	100.00%
Bootstrap support for Q754S1 as seed ortholog is 100%.
Bootstrap support for Q5JIE4 as seed ortholog is 100%.
Bootstrap support for Q5JJ05 as seed ortholog is 100%.

Group of orthologs #294. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 P.kodakaraensis:52

Q756D6              	100.00%		Q5JJ66              	100.00%
                    	       		Q5JJ71              	5.75%
Bootstrap support for Q756D6 as seed ortholog is 100%.
Bootstrap support for Q5JJ66 as seed ortholog is 100%.

Group of orthologs #295. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 P.kodakaraensis:52

Q74ZH4              	100.00%		Q5JIP5              	100.00%
Bootstrap support for Q74ZH4 as seed ortholog is 100%.
Bootstrap support for Q5JIP5 as seed ortholog is 100%.

Group of orthologs #296. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 P.kodakaraensis:52

Q75C52              	100.00%		Q5JE50              	100.00%
Bootstrap support for Q75C52 as seed ortholog is 100%.
Bootstrap support for Q5JE50 as seed ortholog is 100%.

Group of orthologs #297. Best score 52 bits
Score difference with first non-orthologous sequence - A.gossypii:52 P.kodakaraensis:52

Q75AS7              	100.00%		Q5JJF5              	100.00%
Bootstrap support for Q75AS7 as seed ortholog is 100%.
Bootstrap support for Q5JJF5 as seed ortholog is 100%.

Group of orthologs #298. Best score 50 bits
Score difference with first non-orthologous sequence - A.gossypii:50 P.kodakaraensis:50

Q75E76              	100.00%		Q5JHS6              	100.00%
Q75E88              	67.94%		
Q753H9              	65.32%		
Bootstrap support for Q75E76 as seed ortholog is 100%.
Bootstrap support for Q5JHS6 as seed ortholog is 100%.

Group of orthologs #299. Best score 50 bits
Score difference with first non-orthologous sequence - A.gossypii:50 P.kodakaraensis:50

Q75D36              	100.00%		Q5JFH5              	100.00%
                    	       		Q5JHR1              	9.61%
Bootstrap support for Q75D36 as seed ortholog is 100%.
Bootstrap support for Q5JFH5 as seed ortholog is 100%.

Group of orthologs #300. Best score 50 bits
Score difference with first non-orthologous sequence - A.gossypii:50 P.kodakaraensis:50

Q75DU3              	100.00%		Q5JJ42              	100.00%
                    	       		Q5JEY7              	6.84%
Bootstrap support for Q75DU3 as seed ortholog is 100%.
Bootstrap support for Q5JJ42 as seed ortholog is 100%.

Group of orthologs #301. Best score 50 bits
Score difference with first non-orthologous sequence - A.gossypii:50 P.kodakaraensis:50

Q754K8              	100.00%		Q5JEN3              	100.00%
Bootstrap support for Q754K8 as seed ortholog is 100%.
Bootstrap support for Q5JEN3 as seed ortholog is 100%.

Group of orthologs #302. Best score 49 bits
Score difference with first non-orthologous sequence - A.gossypii:49 P.kodakaraensis:49

Q759L4              	100.00%		Q5JHY2              	100.00%
Q752X6              	36.09%		
Bootstrap support for Q759L4 as seed ortholog is 100%.
Bootstrap support for Q5JHY2 as seed ortholog is 100%.

Group of orthologs #303. Best score 49 bits
Score difference with first non-orthologous sequence - A.gossypii:49 P.kodakaraensis:49

Q750N0              	100.00%		Q5JGN3              	100.00%
Bootstrap support for Q750N0 as seed ortholog is 100%.
Bootstrap support for Q5JGN3 as seed ortholog is 100%.

Group of orthologs #304. Best score 49 bits
Score difference with first non-orthologous sequence - A.gossypii:49 P.kodakaraensis:49

Q75CF1              	100.00%		Q5JE88              	100.00%
Bootstrap support for Q75CF1 as seed ortholog is 100%.
Bootstrap support for Q5JE88 as seed ortholog is 100%.

Group of orthologs #305. Best score 48 bits
Score difference with first non-orthologous sequence - A.gossypii:48 P.kodakaraensis:48

Q753B3              	100.00%		Q5JDC4              	100.00%
Bootstrap support for Q753B3 as seed ortholog is 100%.
Bootstrap support for Q5JDC4 as seed ortholog is 100%.

Group of orthologs #306. Best score 48 bits
Score difference with first non-orthologous sequence - A.gossypii:1 P.kodakaraensis:48

Q74ZR8              	100.00%		Q5JIE0              	100.00%
Bootstrap support for Q74ZR8 as seed ortholog is 51%.
Alternative seed ortholog is Q756Y9 (1 bits away from this cluster)
Bootstrap support for Q5JIE0 as seed ortholog is 100%.

Group of orthologs #307. Best score 48 bits
Score difference with first non-orthologous sequence - A.gossypii:48 P.kodakaraensis:48

Q75CP9              	100.00%		Q5JEE0              	100.00%
Bootstrap support for Q75CP9 as seed ortholog is 100%.
Bootstrap support for Q5JEE0 as seed ortholog is 100%.

Group of orthologs #308. Best score 47 bits
Score difference with first non-orthologous sequence - A.gossypii:47 P.kodakaraensis:47

Q74ZG3              	100.00%		Q5JF17              	100.00%
Bootstrap support for Q74ZG3 as seed ortholog is 100%.
Bootstrap support for Q5JF17 as seed ortholog is 100%.

Group of orthologs #309. Best score 46 bits
Score difference with first non-orthologous sequence - A.gossypii:46 P.kodakaraensis:46

Q751D5              	100.00%		Q5JDF3              	100.00%
Q75CQ0              	14.59%		
Bootstrap support for Q751D5 as seed ortholog is 100%.
Bootstrap support for Q5JDF3 as seed ortholog is 100%.

Group of orthologs #310. Best score 45 bits
Score difference with first non-orthologous sequence - A.gossypii:45 P.kodakaraensis:45

Q753H3              	100.00%		Q5JFX3              	100.00%
Bootstrap support for Q753H3 as seed ortholog is 100%.
Bootstrap support for Q5JFX3 as seed ortholog is 100%.

Group of orthologs #311. Best score 44 bits
Score difference with first non-orthologous sequence - A.gossypii:44 P.kodakaraensis:44

Q75AV7              	100.00%		Q5JH23              	100.00%
Bootstrap support for Q75AV7 as seed ortholog is 100%.
Bootstrap support for Q5JH23 as seed ortholog is 100%.

Group of orthologs #312. Best score 43 bits
Score difference with first non-orthologous sequence - A.gossypii:43 P.kodakaraensis:43

Q75E69              	100.00%		Q5JE86              	100.00%
Bootstrap support for Q75E69 as seed ortholog is 100%.
Bootstrap support for Q5JE86 as seed ortholog is 100%.

Group of orthologs #313. Best score 43 bits
Score difference with first non-orthologous sequence - A.gossypii:43 P.kodakaraensis:43

Q75BZ9              	100.00%		Q5JIB4              	100.00%
Bootstrap support for Q75BZ9 as seed ortholog is 100%.
Bootstrap support for Q5JIB4 as seed ortholog is 100%.

Group of orthologs #314. Best score 42 bits
Score difference with first non-orthologous sequence - A.gossypii:42 P.kodakaraensis:42

Q753U8              	100.00%		Q5JEG7              	13.15%
Q755X6              	100.00%		Q5JD61              	100.00%
                    	       		Q5JG46              	12.16%
Bootstrap support for Q753U8 as seed ortholog is 100%.
Bootstrap support for Q755X6 as seed ortholog is 100%.
Bootstrap support for Q5JD61 as seed ortholog is 100%.

Group of orthologs #315. Best score 41 bits
Score difference with first non-orthologous sequence - A.gossypii:41 P.kodakaraensis:41

Q74Z52              	100.00%		Q5JE48              	100.00%
Bootstrap support for Q74Z52 as seed ortholog is 100%.
Bootstrap support for Q5JE48 as seed ortholog is 100%.

Group of orthologs #316. Best score 40 bits
Score difference with first non-orthologous sequence - A.gossypii:40 P.kodakaraensis:40

Q754R1              	100.00%		Q5JG19              	100.00%
Bootstrap support for Q754R1 as seed ortholog is 100%.
Bootstrap support for Q5JG19 as seed ortholog is 100%.