###################################
185 groups of orthologs
232 in-paralogs from C.lusitaniae
196 in-paralogs from C.trachomatis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 843 bits
Score difference with first non-orthologous sequence - C.lusitaniae:607 C.trachomatis:843

C4Y967              	100.00%		O84022              	100.00%
Bootstrap support for C4Y967 as seed ortholog is 100%.
Bootstrap support for O84022 as seed ortholog is 100%.

Group of orthologs #2. Best score 722 bits
Score difference with first non-orthologous sequence - C.lusitaniae:722 C.trachomatis:722

C4Y8B3              	100.00%		O84250              	100.00%
Bootstrap support for C4Y8B3 as seed ortholog is 100%.
Bootstrap support for O84250 as seed ortholog is 100%.

Group of orthologs #3. Best score 681 bits
Score difference with first non-orthologous sequence - C.lusitaniae:48 C.trachomatis:155

C4Y2K3              	100.00%		O84115              	100.00%
Bootstrap support for C4Y2K3 as seed ortholog is 82%.
Bootstrap support for O84115 as seed ortholog is 100%.

Group of orthologs #4. Best score 670 bits
Score difference with first non-orthologous sequence - C.lusitaniae:120 C.trachomatis:670

C4Y7E4              	100.00%		P17821              	100.00%
Bootstrap support for C4Y7E4 as seed ortholog is 99%.
Bootstrap support for P17821 as seed ortholog is 100%.

Group of orthologs #5. Best score 572 bits
Score difference with first non-orthologous sequence - C.lusitaniae:495 C.trachomatis:377

C4XXE6              	100.00%		P0C0Z7              	100.00%
Bootstrap support for C4XXE6 as seed ortholog is 100%.
Bootstrap support for P0C0Z7 as seed ortholog is 100%.

Group of orthologs #6. Best score 541 bits
Score difference with first non-orthologous sequence - C.lusitaniae:541 C.trachomatis:541

C4Y7P2              	100.00%		O84057              	100.00%
Bootstrap support for C4Y7P2 as seed ortholog is 100%.
Bootstrap support for O84057 as seed ortholog is 100%.

Group of orthologs #7. Best score 521 bits
Score difference with first non-orthologous sequence - C.lusitaniae:398 C.trachomatis:521

C4Y8M4              	100.00%		O84067              	100.00%
Bootstrap support for C4Y8M4 as seed ortholog is 100%.
Bootstrap support for O84067 as seed ortholog is 100%.

Group of orthologs #8. Best score 519 bits
Score difference with first non-orthologous sequence - C.lusitaniae:373 C.trachomatis:519

C4Y1H5              	100.00%		O84304              	100.00%
Bootstrap support for C4Y1H5 as seed ortholog is 100%.
Bootstrap support for O84304 as seed ortholog is 100%.

Group of orthologs #9. Best score 517 bits
Score difference with first non-orthologous sequence - C.lusitaniae:517 C.trachomatis:517

C4Y8W6              	100.00%		O84754              	100.00%
Bootstrap support for C4Y8W6 as seed ortholog is 100%.
Bootstrap support for O84754 as seed ortholog is 100%.

Group of orthologs #10. Best score 507 bits
Score difference with first non-orthologous sequence - C.lusitaniae:142 C.trachomatis:507

C4Y212              	100.00%		O84444              	100.00%
Bootstrap support for C4Y212 as seed ortholog is 99%.
Bootstrap support for O84444 as seed ortholog is 100%.

Group of orthologs #11. Best score 488 bits
Score difference with first non-orthologous sequence - C.lusitaniae:488 C.trachomatis:488

C4Y061              	100.00%		O84834              	100.00%
C4Y487              	34.76%		
Bootstrap support for C4Y061 as seed ortholog is 100%.
Bootstrap support for O84834 as seed ortholog is 100%.

Group of orthologs #12. Best score 482 bits
Score difference with first non-orthologous sequence - C.lusitaniae:322 C.trachomatis:482

C4Y8E7              	100.00%		P0CD71              	100.00%
Bootstrap support for C4Y8E7 as seed ortholog is 100%.
Bootstrap support for P0CD71 as seed ortholog is 100%.

Group of orthologs #13. Best score 478 bits
Score difference with first non-orthologous sequence - C.lusitaniae:478 C.trachomatis:478

C4Y7R6              	100.00%		O84066              	100.00%
Bootstrap support for C4Y7R6 as seed ortholog is 100%.
Bootstrap support for O84066 as seed ortholog is 100%.

Group of orthologs #14. Best score 476 bits
Score difference with first non-orthologous sequence - C.lusitaniae:375 C.trachomatis:476

C4Y2K5              	100.00%		O84211              	100.00%
Bootstrap support for C4Y2K5 as seed ortholog is 100%.
Bootstrap support for O84211 as seed ortholog is 100%.

Group of orthologs #15. Best score 473 bits
Score difference with first non-orthologous sequence - C.lusitaniae:473 C.trachomatis:473

C4XW47              	100.00%		O84755              	100.00%
Bootstrap support for C4XW47 as seed ortholog is 100%.
Bootstrap support for O84755 as seed ortholog is 100%.

Group of orthologs #16. Best score 473 bits
Score difference with first non-orthologous sequence - C.lusitaniae:166 C.trachomatis:473

C4YCG5              	100.00%		O84585              	100.00%
Bootstrap support for C4YCG5 as seed ortholog is 99%.
Bootstrap support for O84585 as seed ortholog is 100%.

Group of orthologs #17. Best score 465 bits
Score difference with first non-orthologous sequence - C.lusitaniae:465 C.trachomatis:465

C4Y5T6              	100.00%		O84863              	100.00%
Bootstrap support for C4Y5T6 as seed ortholog is 100%.
Bootstrap support for O84863 as seed ortholog is 100%.

Group of orthologs #18. Best score 441 bits
Score difference with first non-orthologous sequence - C.lusitaniae:441 C.trachomatis:441

C4YC65              	100.00%		P0CD73              	100.00%
Bootstrap support for C4YC65 as seed ortholog is 100%.
Bootstrap support for P0CD73 as seed ortholog is 100%.

Group of orthologs #19. Best score 419 bits
Score difference with first non-orthologous sequence - C.lusitaniae:31 C.trachomatis:419

C4Y5J8              	100.00%		O84848              	100.00%
C4Y1C8              	23.99%		
Bootstrap support for C4Y5J8 as seed ortholog is 74%.
Alternative seed ortholog is C4XY48 (31 bits away from this cluster)
Bootstrap support for O84848 as seed ortholog is 100%.

Group of orthologs #20. Best score 384 bits
Score difference with first non-orthologous sequence - C.lusitaniae:12 C.trachomatis:384

C4Y288              	100.00%		O84348              	100.00%
Bootstrap support for C4Y288 as seed ortholog is 53%.
Alternative seed ortholog is C4YBR6 (12 bits away from this cluster)
Bootstrap support for O84348 as seed ortholog is 100%.

Group of orthologs #21. Best score 383 bits
Score difference with first non-orthologous sequence - C.lusitaniae:383 C.trachomatis:383

C4Y125              	100.00%		Q59321              	100.00%
Bootstrap support for C4Y125 as seed ortholog is 100%.
Bootstrap support for Q59321 as seed ortholog is 100%.

Group of orthologs #22. Best score 382 bits
Score difference with first non-orthologous sequence - C.lusitaniae:231 C.trachomatis:382

C4YCJ9              	100.00%		O84098              	100.00%
Bootstrap support for C4YCJ9 as seed ortholog is 99%.
Bootstrap support for O84098 as seed ortholog is 100%.

Group of orthologs #23. Best score 375 bits
Score difference with first non-orthologous sequence - C.lusitaniae:306 C.trachomatis:375

C4XZK1              	100.00%		O84172              	100.00%
Bootstrap support for C4XZK1 as seed ortholog is 100%.
Bootstrap support for O84172 as seed ortholog is 100%.

Group of orthologs #24. Best score 372 bits
Score difference with first non-orthologous sequence - C.lusitaniae:372 C.trachomatis:372

C4Y5R5              	100.00%		P0CE13              	100.00%
Bootstrap support for C4Y5R5 as seed ortholog is 100%.
Bootstrap support for P0CE13 as seed ortholog is 100%.

Group of orthologs #25. Best score 354 bits
Score difference with first non-orthologous sequence - C.lusitaniae:354 C.trachomatis:354

C4Y6W3              	100.00%		O84591              	100.00%
Bootstrap support for C4Y6W3 as seed ortholog is 100%.
Bootstrap support for O84591 as seed ortholog is 100%.

Group of orthologs #26. Best score 350 bits
Score difference with first non-orthologous sequence - C.lusitaniae:350 C.trachomatis:350

C4Y1B3              	100.00%		O84310              	100.00%
Bootstrap support for C4Y1B3 as seed ortholog is 100%.
Bootstrap support for O84310 as seed ortholog is 100%.

Group of orthologs #27. Best score 343 bits
Score difference with first non-orthologous sequence - C.lusitaniae:343 C.trachomatis:343

C4Y6J5              	100.00%		O84101              	100.00%
Bootstrap support for C4Y6J5 as seed ortholog is 100%.
Bootstrap support for O84101 as seed ortholog is 100%.

Group of orthologs #28. Best score 325 bits
Score difference with first non-orthologous sequence - C.lusitaniae:212 C.trachomatis:325

C4Y0R7              	100.00%		O84035              	100.00%
Bootstrap support for C4Y0R7 as seed ortholog is 99%.
Bootstrap support for O84035 as seed ortholog is 100%.

Group of orthologs #29. Best score 310 bits
Score difference with first non-orthologous sequence - C.lusitaniae:310 C.trachomatis:310

C4Y4H6              	100.00%		O84248              	100.00%
Bootstrap support for C4Y4H6 as seed ortholog is 100%.
Bootstrap support for O84248 as seed ortholog is 100%.

Group of orthologs #30. Best score 306 bits
Score difference with first non-orthologous sequence - C.lusitaniae:123 C.trachomatis:306

C4Y0F4              	100.00%		O84561              	100.00%
Bootstrap support for C4Y0F4 as seed ortholog is 99%.
Bootstrap support for O84561 as seed ortholog is 100%.

Group of orthologs #31. Best score 304 bits
Score difference with first non-orthologous sequence - C.lusitaniae:304 C.trachomatis:304

C4Y618              	100.00%		O84829              	100.00%
Bootstrap support for C4Y618 as seed ortholog is 100%.
Bootstrap support for O84829 as seed ortholog is 100%.

Group of orthologs #32. Best score 304 bits
Score difference with first non-orthologous sequence - C.lusitaniae:304 C.trachomatis:304

C4Y6B1              	100.00%		P0CD78              	100.00%
Bootstrap support for C4Y6B1 as seed ortholog is 100%.
Bootstrap support for P0CD78 as seed ortholog is 100%.

Group of orthologs #33. Best score 293 bits
Score difference with first non-orthologous sequence - C.lusitaniae:101 C.trachomatis:293

C4Y696              	100.00%		O84786              	100.00%
Bootstrap support for C4Y696 as seed ortholog is 97%.
Bootstrap support for O84786 as seed ortholog is 100%.

Group of orthologs #34. Best score 288 bits
Score difference with first non-orthologous sequence - C.lusitaniae:288 C.trachomatis:288

C4Y1M4              	100.00%		O84315              	100.00%
Bootstrap support for C4Y1M4 as seed ortholog is 100%.
Bootstrap support for O84315 as seed ortholog is 100%.

Group of orthologs #35. Best score 288 bits
Score difference with first non-orthologous sequence - C.lusitaniae:288 C.trachomatis:288

C4Y167              	100.00%		O84775              	100.00%
Bootstrap support for C4Y167 as seed ortholog is 100%.
Bootstrap support for O84775 as seed ortholog is 100%.

Group of orthologs #36. Best score 280 bits
Score difference with first non-orthologous sequence - C.lusitaniae:280 C.trachomatis:280

C4Y486              	100.00%		P0CE09              	100.00%
C4Y645              	14.97%		
C4Y3J9              	5.81%		
Bootstrap support for C4Y486 as seed ortholog is 100%.
Bootstrap support for P0CE09 as seed ortholog is 100%.

Group of orthologs #37. Best score 278 bits
Score difference with first non-orthologous sequence - C.lusitaniae:278 C.trachomatis:278

C4Y2A0              	100.00%		O84823              	100.00%
Bootstrap support for C4Y2A0 as seed ortholog is 100%.
Bootstrap support for O84823 as seed ortholog is 100%.

Group of orthologs #38. Best score 276 bits
Score difference with first non-orthologous sequence - C.lusitaniae:276 C.trachomatis:276

C4Y6N6              	100.00%		O84451              	100.00%
Bootstrap support for C4Y6N6 as seed ortholog is 100%.
Bootstrap support for O84451 as seed ortholog is 100%.

Group of orthologs #39. Best score 272 bits
Score difference with first non-orthologous sequence - C.lusitaniae:272 C.trachomatis:272

C4Y0Y8              	100.00%		O84188              	100.00%
Bootstrap support for C4Y0Y8 as seed ortholog is 100%.
Bootstrap support for O84188 as seed ortholog is 100%.

Group of orthologs #40. Best score 272 bits
Score difference with first non-orthologous sequence - C.lusitaniae:272 C.trachomatis:272

C4Y4A1              	100.00%		O84828              	100.00%
Bootstrap support for C4Y4A1 as seed ortholog is 100%.
Bootstrap support for O84828 as seed ortholog is 100%.

Group of orthologs #41. Best score 263 bits
Score difference with first non-orthologous sequence - C.lusitaniae:124 C.trachomatis:263

C4Y3N9              	100.00%		O84546              	100.00%
Bootstrap support for C4Y3N9 as seed ortholog is 99%.
Bootstrap support for O84546 as seed ortholog is 100%.

Group of orthologs #42. Best score 260 bits
Score difference with first non-orthologous sequence - C.lusitaniae:45 C.trachomatis:260

C4Y9E8              	100.00%		O84797              	100.00%
Bootstrap support for C4Y9E8 as seed ortholog is 80%.
Bootstrap support for O84797 as seed ortholog is 100%.

Group of orthologs #43. Best score 259 bits
Score difference with first non-orthologous sequence - C.lusitaniae:259 C.trachomatis:259

C4YA37              	100.00%		O84562              	100.00%
Bootstrap support for C4YA37 as seed ortholog is 100%.
Bootstrap support for O84562 as seed ortholog is 100%.

Group of orthologs #44. Best score 255 bits
Score difference with first non-orthologous sequence - C.lusitaniae:196 C.trachomatis:255

C4XXR3              	100.00%		O84309              	100.00%
Bootstrap support for C4XXR3 as seed ortholog is 100%.
Bootstrap support for O84309 as seed ortholog is 100%.

Group of orthologs #45. Best score 255 bits
Score difference with first non-orthologous sequence - C.lusitaniae:255 C.trachomatis:97

C4XZW3              	100.00%		O84058              	100.00%
Bootstrap support for C4XZW3 as seed ortholog is 100%.
Bootstrap support for O84058 as seed ortholog is 99%.

Group of orthologs #46. Best score 255 bits
Score difference with first non-orthologous sequence - C.lusitaniae:172 C.trachomatis:255

C4XZ59              	100.00%		O84831              	100.00%
Bootstrap support for C4XZ59 as seed ortholog is 99%.
Bootstrap support for O84831 as seed ortholog is 100%.

Group of orthologs #47. Best score 252 bits
Score difference with first non-orthologous sequence - C.lusitaniae:252 C.trachomatis:252

C4XZV9              	100.00%		O84373              	100.00%
Bootstrap support for C4XZV9 as seed ortholog is 100%.
Bootstrap support for O84373 as seed ortholog is 100%.

Group of orthologs #48. Best score 252 bits
Score difference with first non-orthologous sequence - C.lusitaniae:252 C.trachomatis:97

C4Y2V1              	100.00%		O84249              	100.00%
Bootstrap support for C4Y2V1 as seed ortholog is 100%.
Bootstrap support for O84249 as seed ortholog is 98%.

Group of orthologs #49. Best score 249 bits
Score difference with first non-orthologous sequence - C.lusitaniae:249 C.trachomatis:249

C4Y365              	100.00%		O84439              	100.00%
C4Y1L9              	43.04%		
Bootstrap support for C4Y365 as seed ortholog is 100%.
Bootstrap support for O84439 as seed ortholog is 100%.

Group of orthologs #50. Best score 248 bits
Score difference with first non-orthologous sequence - C.lusitaniae:248 C.trachomatis:248

C4XYW6              	100.00%		P0CD72              	100.00%
Bootstrap support for C4XYW6 as seed ortholog is 100%.
Bootstrap support for P0CD72 as seed ortholog is 100%.

Group of orthologs #51. Best score 248 bits
Score difference with first non-orthologous sequence - C.lusitaniae:248 C.trachomatis:248

C4Y214              	100.00%		O84787              	100.00%
Bootstrap support for C4Y214 as seed ortholog is 100%.
Bootstrap support for O84787 as seed ortholog is 100%.

Group of orthologs #52. Best score 237 bits
Score difference with first non-orthologous sequence - C.lusitaniae:237 C.trachomatis:237

C4XWU9              	100.00%		O84642              	100.00%
C4XZV4              	11.65%		
Bootstrap support for C4XWU9 as seed ortholog is 100%.
Bootstrap support for O84642 as seed ortholog is 100%.

Group of orthologs #53. Best score 236 bits
Score difference with first non-orthologous sequence - C.lusitaniae:236 C.trachomatis:82

C4Y6S1              	100.00%		O84026              	100.00%
Bootstrap support for C4Y6S1 as seed ortholog is 100%.
Bootstrap support for O84026 as seed ortholog is 98%.

Group of orthologs #54. Best score 235 bits
Score difference with first non-orthologous sequence - C.lusitaniae:149 C.trachomatis:235

C4Y1K7              	100.00%		O84352              	100.00%
C4Y233              	10.39%		
Bootstrap support for C4Y1K7 as seed ortholog is 99%.
Bootstrap support for O84352 as seed ortholog is 100%.

Group of orthologs #55. Best score 234 bits
Score difference with first non-orthologous sequence - C.lusitaniae:234 C.trachomatis:234

C4Y5N4              	100.00%		O84316              	100.00%
C4Y380              	18.68%		
C4YAX5              	10.85%		
Bootstrap support for C4Y5N4 as seed ortholog is 100%.
Bootstrap support for O84316 as seed ortholog is 100%.

Group of orthologs #56. Best score 232 bits
Score difference with first non-orthologous sequence - C.lusitaniae:232 C.trachomatis:232

C4XWL8              	100.00%		O84698              	100.00%
Bootstrap support for C4XWL8 as seed ortholog is 100%.
Bootstrap support for O84698 as seed ortholog is 100%.

Group of orthologs #57. Best score 231 bits
Score difference with first non-orthologous sequence - C.lusitaniae:231 C.trachomatis:231

C4Y0R8              	100.00%		O84006              	100.00%
Bootstrap support for C4Y0R8 as seed ortholog is 100%.
Bootstrap support for O84006 as seed ortholog is 100%.

Group of orthologs #58. Best score 229 bits
Score difference with first non-orthologous sequence - C.lusitaniae:133 C.trachomatis:117

C4Y181              	100.00%		O84614              	100.00%
Bootstrap support for C4Y181 as seed ortholog is 99%.
Bootstrap support for O84614 as seed ortholog is 99%.

Group of orthologs #59. Best score 228 bits
Score difference with first non-orthologous sequence - C.lusitaniae:228 C.trachomatis:228

C4Y2J1              	100.00%		O84094              	100.00%
C4YB69              	24.42%		
Bootstrap support for C4Y2J1 as seed ortholog is 100%.
Bootstrap support for O84094 as seed ortholog is 100%.

Group of orthologs #60. Best score 225 bits
Score difference with first non-orthologous sequence - C.lusitaniae:225 C.trachomatis:225

C4Y490              	100.00%		O84423              	100.00%
Bootstrap support for C4Y490 as seed ortholog is 100%.
Bootstrap support for O84423 as seed ortholog is 100%.

Group of orthologs #61. Best score 224 bits
Score difference with first non-orthologous sequence - C.lusitaniae:146 C.trachomatis:224

C4XWG2              	100.00%		P36431              	100.00%
Bootstrap support for C4XWG2 as seed ortholog is 99%.
Bootstrap support for P36431 as seed ortholog is 100%.

Group of orthologs #62. Best score 222 bits
Score difference with first non-orthologous sequence - C.lusitaniae:140 C.trachomatis:222

C4XX21              	100.00%		O84596              	100.00%
Bootstrap support for C4XX21 as seed ortholog is 99%.
Bootstrap support for O84596 as seed ortholog is 100%.

Group of orthologs #63. Best score 220 bits
Score difference with first non-orthologous sequence - C.lusitaniae:220 C.trachomatis:220

C4Y459              	100.00%		O84007              	100.00%
Bootstrap support for C4Y459 as seed ortholog is 100%.
Bootstrap support for O84007 as seed ortholog is 100%.

Group of orthologs #64. Best score 208 bits
Score difference with first non-orthologous sequence - C.lusitaniae:208 C.trachomatis:208

C4Y8X7              	100.00%		O84065              	100.00%
Bootstrap support for C4Y8X7 as seed ortholog is 100%.
Bootstrap support for O84065 as seed ortholog is 100%.

Group of orthologs #65. Best score 207 bits
Score difference with first non-orthologous sequence - C.lusitaniae:16 C.trachomatis:207

C4Y028              	100.00%		O84734              	100.00%
Bootstrap support for C4Y028 as seed ortholog is 63%.
Alternative seed ortholog is C4Y432 (16 bits away from this cluster)
Bootstrap support for O84734 as seed ortholog is 100%.

Group of orthologs #66. Best score 206 bits
Score difference with first non-orthologous sequence - C.lusitaniae:38 C.trachomatis:206

C4Y789              	100.00%		O84266              	100.00%
C4XVZ4              	19.61%		
Bootstrap support for C4Y789 as seed ortholog is 79%.
Bootstrap support for O84266 as seed ortholog is 100%.

Group of orthologs #67. Best score 201 bits
Score difference with first non-orthologous sequence - C.lusitaniae:8 C.trachomatis:201

C4Y2W6              	100.00%		O84345              	100.00%
Bootstrap support for C4Y2W6 as seed ortholog is 73%.
Alternative seed ortholog is C4Y6Y8 (8 bits away from this cluster)
Bootstrap support for O84345 as seed ortholog is 100%.

Group of orthologs #68. Best score 201 bits
Score difference with first non-orthologous sequence - C.lusitaniae:201 C.trachomatis:201

C4Y390              	100.00%		O84859              	100.00%
Bootstrap support for C4Y390 as seed ortholog is 100%.
Bootstrap support for O84859 as seed ortholog is 100%.

Group of orthologs #69. Best score 200 bits
Score difference with first non-orthologous sequence - C.lusitaniae:200 C.trachomatis:200

C4Y0K5              	100.00%		O84289              	100.00%
Bootstrap support for C4Y0K5 as seed ortholog is 100%.
Bootstrap support for O84289 as seed ortholog is 100%.

Group of orthologs #70. Best score 198 bits
Score difference with first non-orthologous sequence - C.lusitaniae:198 C.trachomatis:198

C4Y641              	100.00%		O84460              	100.00%
Bootstrap support for C4Y641 as seed ortholog is 100%.
Bootstrap support for O84460 as seed ortholog is 100%.

Group of orthologs #71. Best score 196 bits
Score difference with first non-orthologous sequence - C.lusitaniae:196 C.trachomatis:196

C4Y859              	100.00%		O84704              	100.00%
Bootstrap support for C4Y859 as seed ortholog is 100%.
Bootstrap support for O84704 as seed ortholog is 100%.

Group of orthologs #72. Best score 192 bits
Score difference with first non-orthologous sequence - C.lusitaniae:90 C.trachomatis:192

C4Y1U6              	100.00%		O84812              	100.00%
Bootstrap support for C4Y1U6 as seed ortholog is 97%.
Bootstrap support for O84812 as seed ortholog is 100%.

Group of orthologs #73. Best score 189 bits
Score difference with first non-orthologous sequence - C.lusitaniae:189 C.trachomatis:189

C4XXC8              	100.00%		O84530              	100.00%
Bootstrap support for C4XXC8 as seed ortholog is 100%.
Bootstrap support for O84530 as seed ortholog is 100%.

Group of orthologs #74. Best score 188 bits
Score difference with first non-orthologous sequence - C.lusitaniae:188 C.trachomatis:188

C4XW91              	100.00%		O84297              	100.00%
Bootstrap support for C4XW91 as seed ortholog is 100%.
Bootstrap support for O84297 as seed ortholog is 100%.

Group of orthologs #75. Best score 182 bits
Score difference with first non-orthologous sequence - C.lusitaniae:182 C.trachomatis:182

C4XW29              	100.00%		P0CE21              	100.00%
Bootstrap support for C4XW29 as seed ortholog is 100%.
Bootstrap support for P0CE21 as seed ortholog is 100%.

Group of orthologs #76. Best score 182 bits
Score difference with first non-orthologous sequence - C.lusitaniae:182 C.trachomatis:182

C4Y9P9              	100.00%		O84028              	100.00%
Bootstrap support for C4Y9P9 as seed ortholog is 100%.
Bootstrap support for O84028 as seed ortholog is 100%.

Group of orthologs #77. Best score 179 bits
Score difference with first non-orthologous sequence - C.lusitaniae:179 C.trachomatis:179

C4Y105              	100.00%		O84638              	100.00%
Bootstrap support for C4Y105 as seed ortholog is 100%.
Bootstrap support for O84638 as seed ortholog is 100%.

Group of orthologs #78. Best score 179 bits
Score difference with first non-orthologous sequence - C.lusitaniae:179 C.trachomatis:179

C4Y952              	100.00%		O84402              	100.00%
Bootstrap support for C4Y952 as seed ortholog is 100%.
Bootstrap support for O84402 as seed ortholog is 100%.

Group of orthologs #79. Best score 177 bits
Score difference with first non-orthologous sequence - C.lusitaniae:177 C.trachomatis:177

C4Y374              	100.00%		O84247              	100.00%
Bootstrap support for C4Y374 as seed ortholog is 100%.
Bootstrap support for O84247 as seed ortholog is 100%.

Group of orthologs #80. Best score 175 bits
Score difference with first non-orthologous sequence - C.lusitaniae:175 C.trachomatis:175

C4Y699              	100.00%		O84332              	100.00%
Bootstrap support for C4Y699 as seed ortholog is 100%.
Bootstrap support for O84332 as seed ortholog is 100%.

Group of orthologs #81. Best score 170 bits
Score difference with first non-orthologous sequence - C.lusitaniae:29 C.trachomatis:170

C4XWF5              	100.00%		O84676              	100.00%
                    	       		O84722              	11.57%
Bootstrap support for C4XWF5 as seed ortholog is 79%.
Bootstrap support for O84676 as seed ortholog is 100%.

Group of orthologs #82. Best score 167 bits
Score difference with first non-orthologous sequence - C.lusitaniae:167 C.trachomatis:167

C4Y022              	100.00%		O84296              	100.00%
Bootstrap support for C4Y022 as seed ortholog is 100%.
Bootstrap support for O84296 as seed ortholog is 100%.

Group of orthologs #83. Best score 165 bits
Score difference with first non-orthologous sequence - C.lusitaniae:68 C.trachomatis:165

C4Y612              	100.00%		O84608              	100.00%
Bootstrap support for C4Y612 as seed ortholog is 99%.
Bootstrap support for O84608 as seed ortholog is 100%.

Group of orthologs #84. Best score 161 bits
Score difference with first non-orthologous sequence - C.lusitaniae:114 C.trachomatis:161

C4Y108              	100.00%		O84727              	100.00%
C4XZM6              	24.32%		
Bootstrap support for C4Y108 as seed ortholog is 99%.
Bootstrap support for O84727 as seed ortholog is 100%.

Group of orthologs #85. Best score 161 bits
Score difference with first non-orthologous sequence - C.lusitaniae:161 C.trachomatis:161

C4YBK0              	100.00%		O84630              	100.00%
Bootstrap support for C4YBK0 as seed ortholog is 100%.
Bootstrap support for O84630 as seed ortholog is 100%.

Group of orthologs #86. Best score 160 bits
Score difference with first non-orthologous sequence - C.lusitaniae:160 C.trachomatis:39

C4YB61              	100.00%		O84260              	100.00%
Bootstrap support for C4YB61 as seed ortholog is 100%.
Bootstrap support for O84260 as seed ortholog is 83%.

Group of orthologs #87. Best score 158 bits
Score difference with first non-orthologous sequence - C.lusitaniae:68 C.trachomatis:158

C4Y7Q4              	100.00%		O84478              	100.00%
Bootstrap support for C4Y7Q4 as seed ortholog is 99%.
Bootstrap support for O84478 as seed ortholog is 100%.

Group of orthologs #88. Best score 156 bits
Score difference with first non-orthologous sequence - C.lusitaniae:156 C.trachomatis:156

C4XW14              	100.00%		O84368              	100.00%
Bootstrap support for C4XW14 as seed ortholog is 100%.
Bootstrap support for O84368 as seed ortholog is 100%.

Group of orthologs #89. Best score 155 bits
Score difference with first non-orthologous sequence - C.lusitaniae:109 C.trachomatis:155

C4Y0P0              	100.00%		O84579              	100.00%
Bootstrap support for C4Y0P0 as seed ortholog is 99%.
Bootstrap support for O84579 as seed ortholog is 100%.

Group of orthologs #90. Best score 155 bits
Score difference with first non-orthologous sequence - C.lusitaniae:4 C.trachomatis:155

C4YC88              	100.00%		O84732              	100.00%
Bootstrap support for C4YC88 as seed ortholog is 52%.
Alternative seed ortholog is C4XYT9 (4 bits away from this cluster)
Bootstrap support for O84732 as seed ortholog is 100%.

Group of orthologs #91. Best score 151 bits
Score difference with first non-orthologous sequence - C.lusitaniae:151 C.trachomatis:151

C4XZ69              	100.00%		O84613              	100.00%
Bootstrap support for C4XZ69 as seed ortholog is 100%.
Bootstrap support for O84613 as seed ortholog is 100%.

Group of orthologs #92. Best score 149 bits
Score difference with first non-orthologous sequence - C.lusitaniae:149 C.trachomatis:149

C4XYC5              	100.00%		O84835              	100.00%
Bootstrap support for C4XYC5 as seed ortholog is 100%.
Bootstrap support for O84835 as seed ortholog is 100%.

Group of orthologs #93. Best score 143 bits
Score difference with first non-orthologous sequence - C.lusitaniae:143 C.trachomatis:143

C4XYP1              	100.00%		O84123              	100.00%
Bootstrap support for C4XYP1 as seed ortholog is 100%.
Bootstrap support for O84123 as seed ortholog is 100%.

Group of orthologs #94. Best score 141 bits
Score difference with first non-orthologous sequence - C.lusitaniae:141 C.trachomatis:141

C4YBE7              	100.00%		O84193              	100.00%
                    	       		O84668              	8.02%
Bootstrap support for C4YBE7 as seed ortholog is 100%.
Bootstrap support for O84193 as seed ortholog is 100%.

Group of orthologs #95. Best score 136 bits
Score difference with first non-orthologous sequence - C.lusitaniae:88 C.trachomatis:136

C4Y6J0              	100.00%		O84589              	100.00%
Bootstrap support for C4Y6J0 as seed ortholog is 98%.
Bootstrap support for O84589 as seed ortholog is 100%.

Group of orthologs #96. Best score 136 bits
Score difference with first non-orthologous sequence - C.lusitaniae:136 C.trachomatis:136

C4YB47              	100.00%		O84033              	100.00%
Bootstrap support for C4YB47 as seed ortholog is 100%.
Bootstrap support for O84033 as seed ortholog is 100%.

Group of orthologs #97. Best score 135 bits
Score difference with first non-orthologous sequence - C.lusitaniae:2 C.trachomatis:135

C4Y313              	100.00%		P38004              	100.00%
Bootstrap support for C4Y313 as seed ortholog is 48%.
Alternative seed ortholog is C4Y6G1 (2 bits away from this cluster)
Bootstrap support for P38004 as seed ortholog is 100%.

Group of orthologs #98. Best score 127 bits
Score difference with first non-orthologous sequence - C.lusitaniae:80 C.trachomatis:127

C4Y6E8              	100.00%		P66370              	100.00%
Bootstrap support for C4Y6E8 as seed ortholog is 99%.
Bootstrap support for P66370 as seed ortholog is 100%.

Group of orthologs #99. Best score 124 bits
Score difference with first non-orthologous sequence - C.lusitaniae:124 C.trachomatis:124

C4Y1R4              	100.00%		O84456              	100.00%
Bootstrap support for C4Y1R4 as seed ortholog is 100%.
Bootstrap support for O84456 as seed ortholog is 100%.

Group of orthologs #100. Best score 121 bits
Score difference with first non-orthologous sequence - C.lusitaniae:37 C.trachomatis:121

C4Y0N8              	100.00%		O84200              	100.00%
Bootstrap support for C4Y0N8 as seed ortholog is 80%.
Bootstrap support for O84200 as seed ortholog is 100%.

Group of orthologs #101. Best score 121 bits
Score difference with first non-orthologous sequence - C.lusitaniae:15 C.trachomatis:121

C4Y856              	100.00%		O84843              	100.00%
Bootstrap support for C4Y856 as seed ortholog is 60%.
Alternative seed ortholog is C4Y0F6 (15 bits away from this cluster)
Bootstrap support for O84843 as seed ortholog is 100%.

Group of orthologs #102. Best score 119 bits
Score difference with first non-orthologous sequence - C.lusitaniae:119 C.trachomatis:119

C4XY32              	100.00%		O84096              	100.00%
Bootstrap support for C4XY32 as seed ortholog is 100%.
Bootstrap support for O84096 as seed ortholog is 100%.

Group of orthologs #103. Best score 118 bits
Score difference with first non-orthologous sequence - C.lusitaniae:118 C.trachomatis:118

C4XYR6              	100.00%		O84463              	100.00%
Bootstrap support for C4XYR6 as seed ortholog is 100%.
Bootstrap support for O84463 as seed ortholog is 100%.

Group of orthologs #104. Best score 117 bits
Score difference with first non-orthologous sequence - C.lusitaniae:117 C.trachomatis:117

C4Y8U0              	100.00%		O84492              	100.00%
Bootstrap support for C4Y8U0 as seed ortholog is 100%.
Bootstrap support for O84492 as seed ortholog is 100%.

Group of orthologs #105. Best score 113 bits
Score difference with first non-orthologous sequence - C.lusitaniae:36 C.trachomatis:113

C4YBA9              	100.00%		O84130              	100.00%
C4YAD9              	12.18%		
Bootstrap support for C4YBA9 as seed ortholog is 87%.
Bootstrap support for O84130 as seed ortholog is 100%.

Group of orthologs #106. Best score 113 bits
Score difference with first non-orthologous sequence - C.lusitaniae:113 C.trachomatis:113

C4Y114              	100.00%		O84720              	100.00%
Bootstrap support for C4Y114 as seed ortholog is 100%.
Bootstrap support for O84720 as seed ortholog is 100%.

Group of orthologs #107. Best score 108 bits
Score difference with first non-orthologous sequence - C.lusitaniae:108 C.trachomatis:108

C4Y821              	100.00%		O84533              	100.00%
Bootstrap support for C4Y821 as seed ortholog is 100%.
Bootstrap support for O84533 as seed ortholog is 100%.

Group of orthologs #108. Best score 106 bits
Score difference with first non-orthologous sequence - C.lusitaniae:106 C.trachomatis:106

C4Y3W6              	100.00%		P55137              	100.00%
C4Y199              	10.72%		
Bootstrap support for C4Y3W6 as seed ortholog is 100%.
Bootstrap support for P55137 as seed ortholog is 100%.

Group of orthologs #109. Best score 106 bits
Score difference with first non-orthologous sequence - C.lusitaniae:106 C.trachomatis:106

C4XYV8              	100.00%		O84508              	100.00%
Bootstrap support for C4XYV8 as seed ortholog is 100%.
Bootstrap support for O84508 as seed ortholog is 100%.

Group of orthologs #110. Best score 106 bits
Score difference with first non-orthologous sequence - C.lusitaniae:106 C.trachomatis:106

C4Y8X6              	100.00%		O84779              	100.00%
Bootstrap support for C4Y8X6 as seed ortholog is 100%.
Bootstrap support for O84779 as seed ortholog is 100%.

Group of orthologs #111. Best score 105 bits
Score difference with first non-orthologous sequence - C.lusitaniae:105 C.trachomatis:105

C4Y9S2              	100.00%		O84719              	100.00%
C4Y5B3              	54.46%		
Bootstrap support for C4Y9S2 as seed ortholog is 100%.
Bootstrap support for O84719 as seed ortholog is 100%.

Group of orthologs #112. Best score 105 bits
Score difference with first non-orthologous sequence - C.lusitaniae:105 C.trachomatis:105

C4XW59              	100.00%		O84321              	100.00%
Bootstrap support for C4XW59 as seed ortholog is 100%.
Bootstrap support for O84321 as seed ortholog is 100%.

Group of orthologs #113. Best score 102 bits
Score difference with first non-orthologous sequence - C.lusitaniae:102 C.trachomatis:102

C4Y396              	100.00%		O84649              	100.00%
Bootstrap support for C4Y396 as seed ortholog is 100%.
Bootstrap support for O84649 as seed ortholog is 100%.

Group of orthologs #114. Best score 101 bits
Score difference with first non-orthologous sequence - C.lusitaniae:101 C.trachomatis:101

C4XWE4              	100.00%		O84212              	100.00%
C4Y4I0              	11.56%		
Bootstrap support for C4XWE4 as seed ortholog is 100%.
Bootstrap support for O84212 as seed ortholog is 100%.

Group of orthologs #115. Best score 101 bits
Score difference with first non-orthologous sequence - C.lusitaniae:101 C.trachomatis:101

C4Y0J4              	100.00%		O84771              	100.00%
Bootstrap support for C4Y0J4 as seed ortholog is 100%.
Bootstrap support for O84771 as seed ortholog is 100%.

Group of orthologs #116. Best score 100 bits
Score difference with first non-orthologous sequence - C.lusitaniae:100 C.trachomatis:100

C4Y0R5              	100.00%		O84827              	100.00%
Bootstrap support for C4Y0R5 as seed ortholog is 100%.
Bootstrap support for O84827 as seed ortholog is 100%.

Group of orthologs #117. Best score 100 bits
Score difference with first non-orthologous sequence - C.lusitaniae:100 C.trachomatis:100

C4Y5F2              	100.00%		O84619              	100.00%
Bootstrap support for C4Y5F2 as seed ortholog is 100%.
Bootstrap support for O84619 as seed ortholog is 100%.

Group of orthologs #118. Best score 98 bits
Score difference with first non-orthologous sequence - C.lusitaniae:98 C.trachomatis:98

C4YC77              	100.00%		O84391              	100.00%
Bootstrap support for C4YC77 as seed ortholog is 100%.
Bootstrap support for O84391 as seed ortholog is 100%.

Group of orthologs #119. Best score 97 bits
Score difference with first non-orthologous sequence - C.lusitaniae:6 C.trachomatis:97

C4XWB6              	100.00%		O84442              	100.00%
Bootstrap support for C4XWB6 as seed ortholog is 56%.
Alternative seed ortholog is C4Y857 (6 bits away from this cluster)
Bootstrap support for O84442 as seed ortholog is 100%.

Group of orthologs #120. Best score 97 bits
Score difference with first non-orthologous sequence - C.lusitaniae:97 C.trachomatis:97

C4XZ20              	100.00%		O84578              	100.00%
Bootstrap support for C4XZ20 as seed ortholog is 100%.
Bootstrap support for O84578 as seed ortholog is 100%.

Group of orthologs #121. Best score 97 bits
Score difference with first non-orthologous sequence - C.lusitaniae:41 C.trachomatis:97

C4Y5H9              	100.00%		O84650              	100.00%
Bootstrap support for C4Y5H9 as seed ortholog is 89%.
Bootstrap support for O84650 as seed ortholog is 100%.

Group of orthologs #122. Best score 97 bits
Score difference with first non-orthologous sequence - C.lusitaniae:97 C.trachomatis:97

C4YCG6              	100.00%		P0CD81              	100.00%
Bootstrap support for C4YCG6 as seed ortholog is 100%.
Bootstrap support for P0CD81 as seed ortholog is 100%.

Group of orthologs #123. Best score 96 bits
Score difference with first non-orthologous sequence - C.lusitaniae:96 C.trachomatis:96

C4Y4Y3              	100.00%		O84358              	100.00%
Bootstrap support for C4Y4Y3 as seed ortholog is 100%.
Bootstrap support for O84358 as seed ortholog is 100%.

Group of orthologs #124. Best score 94 bits
Score difference with first non-orthologous sequence - C.lusitaniae:94 C.trachomatis:94

C4YBU4              	100.00%		O84782              	100.00%
C4XYI5              	5.18%		
Bootstrap support for C4YBU4 as seed ortholog is 100%.
Bootstrap support for O84782 as seed ortholog is 100%.

Group of orthologs #125. Best score 94 bits
Score difference with first non-orthologous sequence - C.lusitaniae:94 C.trachomatis:94

C4Y8G7              	100.00%		O84367              	100.00%
Bootstrap support for C4Y8G7 as seed ortholog is 100%.
Bootstrap support for O84367 as seed ortholog is 100%.

Group of orthologs #126. Best score 93 bits
Score difference with first non-orthologous sequence - C.lusitaniae:93 C.trachomatis:93

C4XXQ6              	100.00%		O84320              	100.00%
Bootstrap support for C4XXQ6 as seed ortholog is 100%.
Bootstrap support for O84320 as seed ortholog is 100%.

Group of orthologs #127. Best score 93 bits
Score difference with first non-orthologous sequence - C.lusitaniae:16 C.trachomatis:93

C4Y007              	100.00%		O84544              	100.00%
Bootstrap support for C4Y007 as seed ortholog is 83%.
Bootstrap support for O84544 as seed ortholog is 100%.

Group of orthologs #128. Best score 91 bits
Score difference with first non-orthologous sequence - C.lusitaniae:91 C.trachomatis:91

C4Y6Z3              	100.00%		O84027              	100.00%
Bootstrap support for C4Y6Z3 as seed ortholog is 100%.
Bootstrap support for O84027 as seed ortholog is 100%.

Group of orthologs #129. Best score 90 bits
Score difference with first non-orthologous sequence - C.lusitaniae:90 C.trachomatis:90

C4Y196              	100.00%		O84864              	100.00%
Bootstrap support for C4Y196 as seed ortholog is 100%.
Bootstrap support for O84864 as seed ortholog is 100%.

Group of orthologs #130. Best score 88 bits
Score difference with first non-orthologous sequence - C.lusitaniae:88 C.trachomatis:88

C4Y3L6              	100.00%		O84294              	100.00%
Bootstrap support for C4Y3L6 as seed ortholog is 100%.
Bootstrap support for O84294 as seed ortholog is 100%.

Group of orthologs #131. Best score 88 bits
Score difference with first non-orthologous sequence - C.lusitaniae:88 C.trachomatis:88

C4Y819              	100.00%		P0CE01              	100.00%
Bootstrap support for C4Y819 as seed ortholog is 100%.
Bootstrap support for P0CE01 as seed ortholog is 100%.

Group of orthologs #132. Best score 87 bits
Score difference with first non-orthologous sequence - C.lusitaniae:87 C.trachomatis:87

C4Y644              	100.00%		O84127              	100.00%
Bootstrap support for C4Y644 as seed ortholog is 100%.
Bootstrap support for O84127 as seed ortholog is 100%.

Group of orthologs #133. Best score 86 bits
Score difference with first non-orthologous sequence - C.lusitaniae:86 C.trachomatis:86

C4Y771              	100.00%		O84595              	100.00%
Bootstrap support for C4Y771 as seed ortholog is 100%.
Bootstrap support for O84595 as seed ortholog is 100%.

Group of orthologs #134. Best score 84 bits
Score difference with first non-orthologous sequence - C.lusitaniae:84 C.trachomatis:84

C4Y9J8              	100.00%		O84410              	100.00%
Bootstrap support for C4Y9J8 as seed ortholog is 100%.
Bootstrap support for O84410 as seed ortholog is 100%.

Group of orthologs #135. Best score 84 bits
Score difference with first non-orthologous sequence - C.lusitaniae:84 C.trachomatis:84

C4Y9H2              	100.00%		O84752              	100.00%
Bootstrap support for C4Y9H2 as seed ortholog is 100%.
Bootstrap support for O84752 as seed ortholog is 100%.

Group of orthologs #136. Best score 82 bits
Score difference with first non-orthologous sequence - C.lusitaniae:82 C.trachomatis:82

C4Y9D4              	100.00%		O84710              	100.00%
                    	       		O84415              	10.38%
Bootstrap support for C4Y9D4 as seed ortholog is 100%.
Bootstrap support for O84710 as seed ortholog is 100%.

Group of orthologs #137. Best score 82 bits
Score difference with first non-orthologous sequence - C.lusitaniae:82 C.trachomatis:82

C4XW30              	100.00%		O84435              	100.00%
Bootstrap support for C4XW30 as seed ortholog is 100%.
Bootstrap support for O84435 as seed ortholog is 100%.

Group of orthologs #138. Best score 81 bits
Score difference with first non-orthologous sequence - C.lusitaniae:81 C.trachomatis:81

C4YAY6              	100.00%		O84081              	100.00%
Bootstrap support for C4YAY6 as seed ortholog is 100%.
Bootstrap support for O84081 as seed ortholog is 100%.

Group of orthologs #139. Best score 80 bits
Score difference with first non-orthologous sequence - C.lusitaniae:80 C.trachomatis:80

C4Y4A8              	100.00%		O84189              	100.00%
C4Y341              	14.42%		
Bootstrap support for C4Y4A8 as seed ortholog is 100%.
Bootstrap support for O84189 as seed ortholog is 100%.

Group of orthologs #140. Best score 80 bits
Score difference with first non-orthologous sequence - C.lusitaniae:80 C.trachomatis:80

C4Y9Q0              	100.00%		O84301              	100.00%
Bootstrap support for C4Y9Q0 as seed ortholog is 100%.
Bootstrap support for O84301 as seed ortholog is 100%.

Group of orthologs #141. Best score 79 bits
Score difference with first non-orthologous sequence - C.lusitaniae:37 C.trachomatis:79

C4Y8W1              	100.00%		P0CD88              	100.00%
Bootstrap support for C4Y8W1 as seed ortholog is 94%.
Bootstrap support for P0CD88 as seed ortholog is 100%.

Group of orthologs #142. Best score 76 bits
Score difference with first non-orthologous sequence - C.lusitaniae:76 C.trachomatis:76

C4YBY6              	100.00%		O84338              	100.00%
C4Y5N0              	15.65%		
C4XYZ9              	6.63%		
C4Y848              	6.12%		
Bootstrap support for C4YBY6 as seed ortholog is 100%.
Bootstrap support for O84338 as seed ortholog is 100%.

Group of orthologs #143. Best score 75 bits
Score difference with first non-orthologous sequence - C.lusitaniae:75 C.trachomatis:75

C4Y2N7              	100.00%		O84215              	100.00%
Bootstrap support for C4Y2N7 as seed ortholog is 100%.
Bootstrap support for O84215 as seed ortholog is 100%.

Group of orthologs #144. Best score 74 bits
Score difference with first non-orthologous sequence - C.lusitaniae:8 C.trachomatis:74

C4XXP4              	100.00%		O84806              	100.00%
Bootstrap support for C4XXP4 as seed ortholog is 60%.
Alternative seed ortholog is C4Y3V9 (8 bits away from this cluster)
Bootstrap support for O84806 as seed ortholog is 100%.

Group of orthologs #145. Best score 73 bits
Score difference with first non-orthologous sequence - C.lusitaniae:73 C.trachomatis:73

C4Y393              	100.00%		O84499              	100.00%
Bootstrap support for C4Y393 as seed ortholog is 100%.
Bootstrap support for O84499 as seed ortholog is 100%.

Group of orthologs #146. Best score 71 bits
Score difference with first non-orthologous sequence - C.lusitaniae:71 C.trachomatis:71

C4XYY3              	100.00%		O84547              	100.00%
Bootstrap support for C4XYY3 as seed ortholog is 100%.
Bootstrap support for O84547 as seed ortholog is 100%.

Group of orthologs #147. Best score 71 bits
Score difference with first non-orthologous sequence - C.lusitaniae:12 C.trachomatis:71

C4Y4R7              	100.00%		P0CE04              	100.00%
Bootstrap support for C4Y4R7 as seed ortholog is 70%.
Alternative seed ortholog is C4Y8B6 (12 bits away from this cluster)
Bootstrap support for P0CE04 as seed ortholog is 100%.

Group of orthologs #148. Best score 69 bits
Score difference with first non-orthologous sequence - C.lusitaniae:3 C.trachomatis:69

C4XXG2              	100.00%		O84395              	100.00%
Bootstrap support for C4XXG2 as seed ortholog is 55%.
Alternative seed ortholog is C4Y765 (3 bits away from this cluster)
Bootstrap support for O84395 as seed ortholog is 100%.

Group of orthologs #149. Best score 69 bits
Score difference with first non-orthologous sequence - C.lusitaniae:69 C.trachomatis:69

C4Y7T4              	100.00%		O84469              	100.00%
Bootstrap support for C4Y7T4 as seed ortholog is 100%.
Bootstrap support for O84469 as seed ortholog is 100%.

Group of orthologs #150. Best score 69 bits
Score difference with first non-orthologous sequence - C.lusitaniae:69 C.trachomatis:69

C4YC48              	100.00%		O84220              	100.00%
Bootstrap support for C4YC48 as seed ortholog is 100%.
Bootstrap support for O84220 as seed ortholog is 100%.

Group of orthologs #151. Best score 67 bits
Score difference with first non-orthologous sequence - C.lusitaniae:67 C.trachomatis:67

C4Y0N4              	100.00%		O84205              	100.00%
C4Y3E8              	100.00%		O84421              	100.00%
C4XYI1              	100.00%		O84695              	100.00%
                    	       		O84071              	100.00%
                    	       		O84204              	16.46%
                    	       		O84696              	16.25%
                    	       		O84132              	9.79%
Bootstrap support for C4Y0N4 as seed ortholog is 100%.
Bootstrap support for C4Y3E8 as seed ortholog is 100%.
Bootstrap support for C4XYI1 as seed ortholog is 100%.
Bootstrap support for O84205 as seed ortholog is 100%.
Bootstrap support for O84421 as seed ortholog is 100%.
Bootstrap support for O84695 as seed ortholog is 100%.
Bootstrap support for O84071 as seed ortholog is 100%.

Group of orthologs #152. Best score 67 bits
Score difference with first non-orthologous sequence - C.lusitaniae:67 C.trachomatis:67

C4Y315              	100.00%		O84366              	100.00%
Bootstrap support for C4Y315 as seed ortholog is 100%.
Bootstrap support for O84366 as seed ortholog is 100%.

Group of orthologs #153. Best score 66 bits
Score difference with first non-orthologous sequence - C.lusitaniae:66 C.trachomatis:66

C4XYA1              	100.00%		P0A4C8              	100.00%
Bootstrap support for C4XYA1 as seed ortholog is 100%.
Bootstrap support for P0A4C8 as seed ortholog is 100%.

Group of orthologs #154. Best score 66 bits
Score difference with first non-orthologous sequence - C.lusitaniae:66 C.trachomatis:66

C4XZK4              	100.00%		O84535              	100.00%
Bootstrap support for C4XZK4 as seed ortholog is 100%.
Bootstrap support for O84535 as seed ortholog is 100%.

Group of orthologs #155. Best score 66 bits
Score difference with first non-orthologous sequence - C.lusitaniae:66 C.trachomatis:66

C4Y236              	100.00%		O84221              	100.00%
Bootstrap support for C4Y236 as seed ortholog is 100%.
Bootstrap support for O84221 as seed ortholog is 100%.

Group of orthologs #156. Best score 66 bits
Score difference with first non-orthologous sequence - C.lusitaniae:66 C.trachomatis:66

C4Y1Y8              	100.00%		O84737              	100.00%
Bootstrap support for C4Y1Y8 as seed ortholog is 100%.
Bootstrap support for O84737 as seed ortholog is 100%.

Group of orthologs #157. Best score 66 bits
Score difference with first non-orthologous sequence - C.lusitaniae:66 C.trachomatis:66

C4Y501              	100.00%		O84284              	100.00%
Bootstrap support for C4Y501 as seed ortholog is 100%.
Bootstrap support for O84284 as seed ortholog is 100%.

Group of orthologs #158. Best score 66 bits
Score difference with first non-orthologous sequence - C.lusitaniae:66 C.trachomatis:66

C4Y855              	100.00%		P0CD83              	100.00%
Bootstrap support for C4Y855 as seed ortholog is 100%.
Bootstrap support for P0CD83 as seed ortholog is 100%.

Group of orthologs #159. Best score 65 bits
Score difference with first non-orthologous sequence - C.lusitaniae:65 C.trachomatis:65

C4XYS3              	100.00%		O84618              	100.00%
Bootstrap support for C4XYS3 as seed ortholog is 100%.
Bootstrap support for O84618 as seed ortholog is 100%.

Group of orthologs #160. Best score 65 bits
Score difference with first non-orthologous sequence - C.lusitaniae:65 C.trachomatis:65

C4Y539              	100.00%		O84851              	100.00%
Bootstrap support for C4Y539 as seed ortholog is 100%.
Bootstrap support for O84851 as seed ortholog is 100%.

Group of orthologs #161. Best score 65 bits
Score difference with first non-orthologous sequence - C.lusitaniae:65 C.trachomatis:65

C4Y7Z5              	100.00%		P36424              	100.00%
Bootstrap support for C4Y7Z5 as seed ortholog is 100%.
Bootstrap support for P36424 as seed ortholog is 100%.

Group of orthologs #162. Best score 64 bits
Score difference with first non-orthologous sequence - C.lusitaniae:64 C.trachomatis:64

C4Y3Q7              	100.00%		O84527              	100.00%
Bootstrap support for C4Y3Q7 as seed ortholog is 100%.
Bootstrap support for O84527 as seed ortholog is 100%.

Group of orthologs #163. Best score 63 bits
Score difference with first non-orthologous sequence - C.lusitaniae:63 C.trachomatis:63

C4Y8H1              	100.00%		O84379              	100.00%
C4XXU0              	53.12%		
C4XWM9              	52.84%		
C4Y4U9              	46.88%		
C4Y9T4              	45.11%		
C4XXU1              	36.81%		
C4Y7G1              	33.64%		
C4Y5H1              	32.43%		
C4Y7E1              	24.51%		
C4Y0E1              	22.93%		
C4YAB7              	22.93%		
C4Y6Z6              	22.27%		
C4XVQ3              	21.81%		
C4Y116              	19.11%		
C4Y9B2              	18.55%		
C4Y7E2              	16.78%		
C4XXK5              	16.22%		
C4Y748              	15.19%		
C4Y1D7              	14.26%		
C4Y7E0              	11.18%		
C4XWY1              	9.69%		
C4XW39              	9.41%		
Bootstrap support for C4Y8H1 as seed ortholog is 100%.
Bootstrap support for O84379 as seed ortholog is 100%.

Group of orthologs #164. Best score 63 bits
Score difference with first non-orthologous sequence - C.lusitaniae:63 C.trachomatis:63

C4Y7C9              	100.00%		P66480              	100.00%
Bootstrap support for C4Y7C9 as seed ortholog is 100%.
Bootstrap support for P66480 as seed ortholog is 100%.

Group of orthologs #165. Best score 62 bits
Score difference with first non-orthologous sequence - C.lusitaniae:62 C.trachomatis:62

C4Y707              	100.00%		P18584              	100.00%
Bootstrap support for C4Y707 as seed ortholog is 100%.
Bootstrap support for P18584 as seed ortholog is 100%.

Group of orthologs #166. Best score 60 bits
Score difference with first non-orthologous sequence - C.lusitaniae:60 C.trachomatis:60

C4Y928              	100.00%		O84735              	100.00%
Bootstrap support for C4Y928 as seed ortholog is 100%.
Bootstrap support for O84735 as seed ortholog is 100%.

Group of orthologs #167. Best score 59 bits
Score difference with first non-orthologous sequence - C.lusitaniae:59 C.trachomatis:59

C4Y802              	100.00%		O84381              	100.00%
C4Y826              	42.76%		
C4Y9Q7              	35.60%		
Bootstrap support for C4Y802 as seed ortholog is 100%.
Bootstrap support for O84381 as seed ortholog is 100%.

Group of orthologs #168. Best score 59 bits
Score difference with first non-orthologous sequence - C.lusitaniae:59 C.trachomatis:59

C4Y2U9              	100.00%		O84353              	100.00%
Bootstrap support for C4Y2U9 as seed ortholog is 100%.
Bootstrap support for O84353 as seed ortholog is 100%.

Group of orthologs #169. Best score 59 bits
Score difference with first non-orthologous sequence - C.lusitaniae:59 C.trachomatis:59

C4Y2G6              	100.00%		O84792              	100.00%
Bootstrap support for C4Y2G6 as seed ortholog is 100%.
Bootstrap support for O84792 as seed ortholog is 100%.

Group of orthologs #170. Best score 59 bits
Score difference with first non-orthologous sequence - C.lusitaniae:59 C.trachomatis:59

C4Y4D7              	100.00%		O84496              	100.00%
Bootstrap support for C4Y4D7 as seed ortholog is 100%.
Bootstrap support for O84496 as seed ortholog is 100%.

Group of orthologs #171. Best score 59 bits
Score difference with first non-orthologous sequence - C.lusitaniae:59 C.trachomatis:59

C4Y636              	100.00%		O84611              	100.00%
Bootstrap support for C4Y636 as seed ortholog is 100%.
Bootstrap support for O84611 as seed ortholog is 100%.

Group of orthologs #172. Best score 58 bits
Score difference with first non-orthologous sequence - C.lusitaniae:58 C.trachomatis:58

C4Y5V0              	100.00%		O84390              	100.00%
Bootstrap support for C4Y5V0 as seed ortholog is 100%.
Bootstrap support for O84390 as seed ortholog is 100%.

Group of orthologs #173. Best score 58 bits
Score difference with first non-orthologous sequence - C.lusitaniae:4 C.trachomatis:58

C4Y4X5              	100.00%		O84822              	100.00%
Bootstrap support for C4Y4X5 as seed ortholog is 55%.
Alternative seed ortholog is C4XWV0 (4 bits away from this cluster)
Bootstrap support for O84822 as seed ortholog is 100%.

Group of orthologs #174. Best score 57 bits
Score difference with first non-orthologous sequence - C.lusitaniae:57 C.trachomatis:4

C4XYV5              	100.00%		O84183              	100.00%
                    	       		O84660              	6.85%
                    	       		O84154              	5.08%
Bootstrap support for C4XYV5 as seed ortholog is 100%.
Bootstrap support for O84183 as seed ortholog is 56%.
Alternative seed ortholog is O84691 (4 bits away from this cluster)

Group of orthologs #175. Best score 54 bits
Score difference with first non-orthologous sequence - C.lusitaniae:54 C.trachomatis:54

C4Y497              	100.00%		O84241              	100.00%
Bootstrap support for C4Y497 as seed ortholog is 100%.
Bootstrap support for O84241 as seed ortholog is 100%.

Group of orthologs #176. Best score 53 bits
Score difference with first non-orthologous sequence - C.lusitaniae:13 C.trachomatis:53

C4XXG6              	100.00%		P0CE06              	100.00%
Bootstrap support for C4XXG6 as seed ortholog is 70%.
Alternative seed ortholog is C4Y9U6 (13 bits away from this cluster)
Bootstrap support for P0CE06 as seed ortholog is 100%.

Group of orthologs #177. Best score 52 bits
Score difference with first non-orthologous sequence - C.lusitaniae:52 C.trachomatis:52

C4Y2R4              	100.00%		P0CE02              	100.00%
Bootstrap support for C4Y2R4 as seed ortholog is 100%.
Bootstrap support for P0CE02 as seed ortholog is 100%.

Group of orthologs #178. Best score 52 bits
Score difference with first non-orthologous sequence - C.lusitaniae:52 C.trachomatis:52

C4Y5L4              	100.00%		O84331              	100.00%
Bootstrap support for C4Y5L4 as seed ortholog is 100%.
Bootstrap support for O84331 as seed ortholog is 100%.

Group of orthologs #179. Best score 51 bits
Score difference with first non-orthologous sequence - C.lusitaniae:51 C.trachomatis:51

C4Y6D3              	100.00%		O84684              	100.00%
Bootstrap support for C4Y6D3 as seed ortholog is 100%.
Bootstrap support for O84684 as seed ortholog is 100%.

Group of orthologs #180. Best score 50 bits
Score difference with first non-orthologous sequence - C.lusitaniae:50 C.trachomatis:50

C4XX39              	100.00%		O84777              	100.00%
C4YBD4              	42.22%		
Bootstrap support for C4XX39 as seed ortholog is 100%.
Bootstrap support for O84777 as seed ortholog is 100%.

Group of orthologs #181. Best score 48 bits
Score difference with first non-orthologous sequence - C.lusitaniae:48 C.trachomatis:48

C4Y7U8              	100.00%		O84029              	100.00%
Bootstrap support for C4Y7U8 as seed ortholog is 100%.
Bootstrap support for O84029 as seed ortholog is 100%.

Group of orthologs #182. Best score 45 bits
Score difference with first non-orthologous sequence - C.lusitaniae:45 C.trachomatis:45

C4XXK6              	100.00%		O84140              	100.00%
Bootstrap support for C4XXK6 as seed ortholog is 100%.
Bootstrap support for O84140 as seed ortholog is 100%.

Group of orthologs #183. Best score 44 bits
Score difference with first non-orthologous sequence - C.lusitaniae:44 C.trachomatis:44

C4Y6H8              	100.00%		P0CD80              	100.00%
Bootstrap support for C4Y6H8 as seed ortholog is 100%.
Bootstrap support for P0CD80 as seed ortholog is 100%.

Group of orthologs #184. Best score 42 bits
Score difference with first non-orthologous sequence - C.lusitaniae:42 C.trachomatis:42

C4XZJ0              	100.00%		O84138              	100.00%
Bootstrap support for C4XZJ0 as seed ortholog is 100%.
Bootstrap support for O84138 as seed ortholog is 100%.

Group of orthologs #185. Best score 40 bits
Score difference with first non-orthologous sequence - C.lusitaniae:40 C.trachomatis:40

C4Y966              	100.00%		O84219              	100.00%
Bootstrap support for C4Y966 as seed ortholog is 100%.
Bootstrap support for O84219 as seed ortholog is 100%.