###################################
107 groups of orthologs
133 in-paralogs from C.parvum
110 in-paralogs from C.trachomatis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 824 bits
Score difference with first non-orthologous sequence - C.parvum:824 C.trachomatis:718

A3FQ48              	100.00%		O84022              	100.00%
Bootstrap support for A3FQ48 as seed ortholog is 100%.
Bootstrap support for O84022 as seed ortholog is 100%.

Group of orthologs #2. Best score 715 bits
Score difference with first non-orthologous sequence - C.parvum:715 C.trachomatis:715

Q5CX54              	100.00%		O84250              	100.00%
Bootstrap support for Q5CX54 as seed ortholog is 100%.
Bootstrap support for O84250 as seed ortholog is 100%.

Group of orthologs #3. Best score 665 bits
Score difference with first non-orthologous sequence - C.parvum:111 C.trachomatis:665

Q5CUB9              	100.00%		P17821              	100.00%
Bootstrap support for Q5CUB9 as seed ortholog is 99%.
Bootstrap support for P17821 as seed ortholog is 100%.

Group of orthologs #4. Best score 497 bits
Score difference with first non-orthologous sequence - C.parvum:497 C.trachomatis:497

Q5CVR2              	100.00%		O84304              	100.00%
Bootstrap support for Q5CVR2 as seed ortholog is 100%.
Bootstrap support for O84304 as seed ortholog is 100%.

Group of orthologs #5. Best score 467 bits
Score difference with first non-orthologous sequence - C.parvum:389 C.trachomatis:467

Q5CWY1              	100.00%		O84874              	100.00%
Bootstrap support for Q5CWY1 as seed ortholog is 100%.
Bootstrap support for O84874 as seed ortholog is 100%.

Group of orthologs #6. Best score 457 bits
Score difference with first non-orthologous sequence - C.parvum:457 C.trachomatis:457

Q5CYN0              	100.00%		O84585              	100.00%
Bootstrap support for Q5CYN0 as seed ortholog is 100%.
Bootstrap support for O84585 as seed ortholog is 100%.

Group of orthologs #7. Best score 455 bits
Score difference with first non-orthologous sequence - C.parvum:455 C.trachomatis:455

Q5CX98              	100.00%		O84834              	100.00%
Bootstrap support for Q5CX98 as seed ortholog is 100%.
Bootstrap support for O84834 as seed ortholog is 100%.

Group of orthologs #8. Best score 450 bits
Score difference with first non-orthologous sequence - C.parvum:370 C.trachomatis:289

Q5CWI3              	100.00%		P0C0Z7              	100.00%
Bootstrap support for Q5CWI3 as seed ortholog is 100%.
Bootstrap support for P0C0Z7 as seed ortholog is 100%.

Group of orthologs #9. Best score 446 bits
Score difference with first non-orthologous sequence - C.parvum:446 C.trachomatis:446

Q5CXL6              	100.00%		O84754              	100.00%
Bootstrap support for Q5CXL6 as seed ortholog is 100%.
Bootstrap support for O84754 as seed ortholog is 100%.

Group of orthologs #10. Best score 398 bits
Score difference with first non-orthologous sequence - C.parvum:398 C.trachomatis:398

A3FQP6              	100.00%		O84460              	100.00%
Bootstrap support for A3FQP6 as seed ortholog is 100%.
Bootstrap support for O84460 as seed ortholog is 100%.

Group of orthologs #11. Best score 386 bits
Score difference with first non-orthologous sequence - C.parvum:386 C.trachomatis:386

Q5CSB7              	100.00%		O84848              	100.00%
Bootstrap support for Q5CSB7 as seed ortholog is 100%.
Bootstrap support for O84848 as seed ortholog is 100%.

Group of orthologs #12. Best score 359 bits
Score difference with first non-orthologous sequence - C.parvum:359 C.trachomatis:359

Q5CRS1              	100.00%		Q59321              	100.00%
Bootstrap support for Q5CRS1 as seed ortholog is 100%.
Bootstrap support for Q59321 as seed ortholog is 100%.

Group of orthologs #13. Best score 358 bits
Score difference with first non-orthologous sequence - C.parvum:358 C.trachomatis:358

Q5CWT6              	100.00%		P0CE13              	100.00%
Bootstrap support for Q5CWT6 as seed ortholog is 100%.
Bootstrap support for P0CE13 as seed ortholog is 100%.

Group of orthologs #14. Best score 356 bits
Score difference with first non-orthologous sequence - C.parvum:356 C.trachomatis:356

Q5CXT6              	100.00%		O84310              	100.00%
Bootstrap support for Q5CXT6 as seed ortholog is 100%.
Bootstrap support for O84310 as seed ortholog is 100%.

Group of orthologs #15. Best score 354 bits
Score difference with first non-orthologous sequence - C.parvum:354 C.trachomatis:354

Q5CRP8              	100.00%		O84591              	100.00%
Bootstrap support for Q5CRP8 as seed ortholog is 100%.
Bootstrap support for O84591 as seed ortholog is 100%.

Group of orthologs #16. Best score 352 bits
Score difference with first non-orthologous sequence - C.parvum:352 C.trachomatis:352

Q5CPD7              	100.00%		O84172              	100.00%
Bootstrap support for Q5CPD7 as seed ortholog is 100%.
Bootstrap support for O84172 as seed ortholog is 100%.

Group of orthologs #17. Best score 331 bits
Score difference with first non-orthologous sequence - C.parvum:331 C.trachomatis:331

Q5CS83              	100.00%		O84823              	100.00%
Bootstrap support for Q5CS83 as seed ortholog is 100%.
Bootstrap support for O84823 as seed ortholog is 100%.

Group of orthologs #18. Best score 324 bits
Score difference with first non-orthologous sequence - C.parvum:270 C.trachomatis:324

Q5CR27              	100.00%		O84786              	100.00%
Bootstrap support for Q5CR27 as seed ortholog is 100%.
Bootstrap support for O84786 as seed ortholog is 100%.

Group of orthologs #19. Best score 305 bits
Score difference with first non-orthologous sequence - C.parvum:305 C.trachomatis:305

Q5CYV1              	100.00%		P0CD78              	100.00%
Bootstrap support for Q5CYV1 as seed ortholog is 100%.
Bootstrap support for P0CD78 as seed ortholog is 100%.

Group of orthologs #20. Best score 290 bits
Score difference with first non-orthologous sequence - C.parvum:290 C.trachomatis:290

Q5CUJ2              	100.00%		O84316              	100.00%
Q5CWY0              	13.09%		
A3FQH3              	5.87%		
Bootstrap support for Q5CUJ2 as seed ortholog is 100%.
Bootstrap support for O84316 as seed ortholog is 100%.

Group of orthologs #21. Best score 268 bits
Score difference with first non-orthologous sequence - C.parvum:268 C.trachomatis:268

Q5CSM7              	100.00%		P0CE21              	100.00%
Bootstrap support for Q5CSM7 as seed ortholog is 100%.
Bootstrap support for P0CE21 as seed ortholog is 100%.

Group of orthologs #22. Best score 260 bits
Score difference with first non-orthologous sequence - C.parvum:260 C.trachomatis:260

Q5CPZ8              	100.00%		P0CE09              	100.00%
Q5CY45              	15.42%		
Q5CSG7              	6.63%		
Bootstrap support for Q5CPZ8 as seed ortholog is 100%.
Bootstrap support for P0CE09 as seed ortholog is 100%.

Group of orthologs #23. Best score 255 bits
Score difference with first non-orthologous sequence - C.parvum:48 C.trachomatis:255

A3FQP9              	100.00%		O84797              	100.00%
Bootstrap support for A3FQP9 as seed ortholog is 91%.
Bootstrap support for O84797 as seed ortholog is 100%.

Group of orthologs #24. Best score 253 bits
Score difference with first non-orthologous sequence - C.parvum:253 C.trachomatis:253

Q5CW46              	100.00%		O84309              	100.00%
Bootstrap support for Q5CW46 as seed ortholog is 100%.
Bootstrap support for O84309 as seed ortholog is 100%.

Group of orthologs #25. Best score 242 bits
Score difference with first non-orthologous sequence - C.parvum:242 C.trachomatis:242

Q5CSG8              	100.00%		O84094              	100.00%
Bootstrap support for Q5CSG8 as seed ortholog is 100%.
Bootstrap support for O84094 as seed ortholog is 100%.

Group of orthologs #26. Best score 242 bits
Score difference with first non-orthologous sequence - C.parvum:177 C.trachomatis:242

Q5CWF9              	100.00%		O84352              	100.00%
Bootstrap support for Q5CWF9 as seed ortholog is 99%.
Bootstrap support for O84352 as seed ortholog is 100%.

Group of orthologs #27. Best score 241 bits
Score difference with first non-orthologous sequence - C.parvum:241 C.trachomatis:241

Q5CTF8              	100.00%		P0CD72              	100.00%
Bootstrap support for Q5CTF8 as seed ortholog is 100%.
Bootstrap support for P0CD72 as seed ortholog is 100%.

Group of orthologs #28. Best score 234 bits
Score difference with first non-orthologous sequence - C.parvum:99 C.trachomatis:234

Q5CU45              	100.00%		O84812              	100.00%
Q5CU44              	80.93%		
Bootstrap support for Q5CU45 as seed ortholog is 98%.
Bootstrap support for O84812 as seed ortholog is 100%.

Group of orthologs #29. Best score 223 bits
Score difference with first non-orthologous sequence - C.parvum:223 C.trachomatis:223

Q5CXI5              	100.00%		O84787              	100.00%
Bootstrap support for Q5CXI5 as seed ortholog is 100%.
Bootstrap support for O84787 as seed ortholog is 100%.

Group of orthologs #30. Best score 206 bits
Score difference with first non-orthologous sequence - C.parvum:206 C.trachomatis:206

Q5CVB3              	100.00%		O84734              	100.00%
Bootstrap support for Q5CVB3 as seed ortholog is 100%.
Bootstrap support for O84734 as seed ortholog is 100%.

Group of orthologs #31. Best score 202 bits
Score difference with first non-orthologous sequence - C.parvum:202 C.trachomatis:202

Q5CYV8              	100.00%		O84196              	100.00%
Bootstrap support for Q5CYV8 as seed ortholog is 100%.
Bootstrap support for O84196 as seed ortholog is 100%.

Group of orthologs #32. Best score 200 bits
Score difference with first non-orthologous sequence - C.parvum:200 C.trachomatis:122

Q5CSH4              	100.00%		O84859              	100.00%
Bootstrap support for Q5CSH4 as seed ortholog is 100%.
Bootstrap support for O84859 as seed ortholog is 99%.

Group of orthologs #33. Best score 194 bits
Score difference with first non-orthologous sequence - C.parvum:194 C.trachomatis:194

A3FQN6              	100.00%		O84608              	100.00%
Bootstrap support for A3FQN6 as seed ortholog is 100%.
Bootstrap support for O84608 as seed ortholog is 100%.

Group of orthologs #34. Best score 191 bits
Score difference with first non-orthologous sequence - C.parvum:75 C.trachomatis:68

Q5CYN6              	100.00%		O84028              	100.00%
Bootstrap support for Q5CYN6 as seed ortholog is 98%.
Bootstrap support for O84028 as seed ortholog is 98%.

Group of orthologs #35. Best score 189 bits
Score difference with first non-orthologous sequence - C.parvum:87 C.trachomatis:189

Q5CVV8              	100.00%		O84439              	100.00%
Bootstrap support for Q5CVV8 as seed ortholog is 97%.
Bootstrap support for O84439 as seed ortholog is 100%.

Group of orthologs #36. Best score 180 bits
Score difference with first non-orthologous sequence - C.parvum:180 C.trachomatis:180

Q5CSE7              	100.00%		O84332              	100.00%
Bootstrap support for Q5CSE7 as seed ortholog is 100%.
Bootstrap support for O84332 as seed ortholog is 100%.

Group of orthologs #37. Best score 178 bits
Score difference with first non-orthologous sequence - C.parvum:12 C.trachomatis:178

Q5CVK0              	100.00%		O84345              	100.00%
Bootstrap support for Q5CVK0 as seed ortholog is 81%.
Bootstrap support for O84345 as seed ortholog is 100%.

Group of orthologs #38. Best score 170 bits
Score difference with first non-orthologous sequence - C.parvum:80 C.trachomatis:170

A3FPW5              	100.00%		P0CD71              	100.00%
A3FQ81              	12.98%		
Bootstrap support for A3FPW5 as seed ortholog is 96%.
Bootstrap support for P0CD71 as seed ortholog is 100%.

Group of orthologs #39. Best score 167 bits
Score difference with first non-orthologous sequence - C.parvum:167 C.trachomatis:167

Q5CVS6              	100.00%		O84444              	100.00%
Q5CU80              	21.16%		
A3FPW4              	12.10%		
Bootstrap support for Q5CVS6 as seed ortholog is 100%.
Bootstrap support for O84444 as seed ortholog is 100%.

Group of orthologs #40. Best score 167 bits
Score difference with first non-orthologous sequence - C.parvum:167 C.trachomatis:167

Q5CT26              	100.00%		O84630              	100.00%
Bootstrap support for Q5CT26 as seed ortholog is 100%.
Bootstrap support for O84630 as seed ortholog is 100%.

Group of orthologs #41. Best score 165 bits
Score difference with first non-orthologous sequence - C.parvum:165 C.trachomatis:165

Q5CT58              	100.00%		O84561              	100.00%
Bootstrap support for Q5CT58 as seed ortholog is 100%.
Bootstrap support for O84561 as seed ortholog is 100%.

Group of orthologs #42. Best score 164 bits
Score difference with first non-orthologous sequence - C.parvum:164 C.trachomatis:164

Q5CRI9              	100.00%		O84049              	100.00%
Bootstrap support for Q5CRI9 as seed ortholog is 100%.
Bootstrap support for O84049 as seed ortholog is 100%.

Group of orthologs #43. Best score 163 bits
Score difference with first non-orthologous sequence - C.parvum:163 C.trachomatis:163

Q5CPT5              	100.00%		O84478              	100.00%
Bootstrap support for Q5CPT5 as seed ortholog is 100%.
Bootstrap support for O84478 as seed ortholog is 100%.

Group of orthologs #44. Best score 159 bits
Score difference with first non-orthologous sequence - C.parvum:159 C.trachomatis:159

Q5CYE7              	100.00%		O84288              	100.00%
                    	       		O84115              	27.52%
Bootstrap support for Q5CYE7 as seed ortholog is 100%.
Bootstrap support for O84288 as seed ortholog is 100%.

Group of orthologs #45. Best score 158 bits
Score difference with first non-orthologous sequence - C.parvum:158 C.trachomatis:158

Q5CW52              	100.00%		O84548              	100.00%
Bootstrap support for Q5CW52 as seed ortholog is 100%.
Bootstrap support for O84548 as seed ortholog is 100%.

Group of orthologs #46. Best score 158 bits
Score difference with first non-orthologous sequence - C.parvum:158 C.trachomatis:158

Q5CXZ9              	100.00%		O84727              	100.00%
Bootstrap support for Q5CXZ9 as seed ortholog is 100%.
Bootstrap support for O84727 as seed ortholog is 100%.

Group of orthologs #47. Best score 152 bits
Score difference with first non-orthologous sequence - C.parvum:152 C.trachomatis:13

Q5CVQ2              	100.00%		O84614              	100.00%
Bootstrap support for Q5CVQ2 as seed ortholog is 100%.
Bootstrap support for O84614 as seed ortholog is 64%.
Alternative seed ortholog is O84645 (13 bits away from this cluster)

Group of orthologs #48. Best score 146 bits
Score difference with first non-orthologous sequence - C.parvum:146 C.trachomatis:146

A3FQJ9              	100.00%		O84296              	100.00%
Bootstrap support for A3FQJ9 as seed ortholog is 100%.
Bootstrap support for O84296 as seed ortholog is 100%.

Group of orthologs #49. Best score 144 bits
Score difference with first non-orthologous sequence - C.parvum:21 C.trachomatis:144

A3FQ64              	100.00%		O84676              	100.00%
                    	       		O84722              	14.81%
Bootstrap support for A3FQ64 as seed ortholog is 70%.
Alternative seed ortholog is A3FPS2 (21 bits away from this cluster)
Bootstrap support for O84676 as seed ortholog is 100%.

Group of orthologs #50. Best score 143 bits
Score difference with first non-orthologous sequence - C.parvum:143 C.trachomatis:143

Q5CX78              	100.00%		O84098              	100.00%
Bootstrap support for Q5CX78 as seed ortholog is 100%.
Bootstrap support for O84098 as seed ortholog is 100%.

Group of orthologs #51. Best score 135 bits
Score difference with first non-orthologous sequence - C.parvum:89 C.trachomatis:135

Q5CXK7              	100.00%		O84835              	100.00%
Bootstrap support for Q5CXK7 as seed ortholog is 98%.
Bootstrap support for O84835 as seed ortholog is 100%.

Group of orthologs #52. Best score 134 bits
Score difference with first non-orthologous sequence - C.parvum:56 C.trachomatis:134

A3FPN1              	100.00%		O84546              	100.00%
Bootstrap support for A3FPN1 as seed ortholog is 91%.
Bootstrap support for O84546 as seed ortholog is 100%.

Group of orthologs #53. Best score 131 bits
Score difference with first non-orthologous sequence - C.parvum:131 C.trachomatis:47

Q5CVN0              	100.00%		O84035              	100.00%
Bootstrap support for Q5CVN0 as seed ortholog is 100%.
Bootstrap support for O84035 as seed ortholog is 84%.

Group of orthologs #54. Best score 128 bits
Score difference with first non-orthologous sequence - C.parvum:61 C.trachomatis:128

Q5CQG5              	100.00%		O84720              	100.00%
Bootstrap support for Q5CQG5 as seed ortholog is 93%.
Bootstrap support for O84720 as seed ortholog is 100%.

Group of orthologs #55. Best score 126 bits
Score difference with first non-orthologous sequence - C.parvum:126 C.trachomatis:20

Q5CQW4              	100.00%		O84260              	100.00%
Bootstrap support for Q5CQW4 as seed ortholog is 100%.
Bootstrap support for O84260 as seed ortholog is 35%.
Alternative seed ortholog is O84693 (20 bits away from this cluster)

Group of orthologs #56. Best score 125 bits
Score difference with first non-orthologous sequence - C.parvum:125 C.trachomatis:125

Q5CY06              	100.00%		O84732              	100.00%
Q5CQZ5              	14.93%		
Bootstrap support for Q5CY06 as seed ortholog is 100%.
Bootstrap support for O84732 as seed ortholog is 100%.

Group of orthologs #57. Best score 121 bits
Score difference with first non-orthologous sequence - C.parvum:121 C.trachomatis:121

A3FPN2              	100.00%		O84613              	100.00%
Bootstrap support for A3FPN2 as seed ortholog is 100%.
Bootstrap support for O84613 as seed ortholog is 100%.

Group of orthologs #58. Best score 121 bits
Score difference with first non-orthologous sequence - C.parvum:121 C.trachomatis:121

Q5CSU0              	100.00%		O84266              	100.00%
Bootstrap support for Q5CSU0 as seed ortholog is 100%.
Bootstrap support for O84266 as seed ortholog is 100%.

Group of orthologs #59. Best score 119 bits
Score difference with first non-orthologous sequence - C.parvum:27 C.trachomatis:119

Q5CRC5              	100.00%		O84130              	100.00%
Bootstrap support for Q5CRC5 as seed ortholog is 81%.
Bootstrap support for O84130 as seed ortholog is 100%.

Group of orthologs #60. Best score 115 bits
Score difference with first non-orthologous sequence - C.parvum:115 C.trachomatis:115

Q5CR64              	100.00%		O84508              	100.00%
Q5CRU2              	16.09%		
Bootstrap support for Q5CR64 as seed ortholog is 100%.
Bootstrap support for O84508 as seed ortholog is 100%.

Group of orthologs #61. Best score 112 bits
Score difference with first non-orthologous sequence - C.parvum:112 C.trachomatis:112

A3FPU8              	100.00%		O84771              	100.00%
Bootstrap support for A3FPU8 as seed ortholog is 100%.
Bootstrap support for O84771 as seed ortholog is 100%.

Group of orthologs #62. Best score 111 bits
Score difference with first non-orthologous sequence - C.parvum:111 C.trachomatis:111

Q5CQA1              	100.00%		O84456              	100.00%
Bootstrap support for Q5CQA1 as seed ortholog is 100%.
Bootstrap support for O84456 as seed ortholog is 100%.

Group of orthologs #63. Best score 106 bits
Score difference with first non-orthologous sequence - C.parvum:106 C.trachomatis:106

A3FPU5              	100.00%		O84649              	100.00%
A3FQH8              	15.21%		
Bootstrap support for A3FPU5 as seed ortholog is 100%.
Bootstrap support for O84649 as seed ortholog is 100%.

Group of orthologs #64. Best score 104 bits
Score difference with first non-orthologous sequence - C.parvum:104 C.trachomatis:104

Q5CYI7              	100.00%		O84033              	100.00%
Bootstrap support for Q5CYI7 as seed ortholog is 100%.
Bootstrap support for O84033 as seed ortholog is 100%.

Group of orthologs #65. Best score 98 bits
Score difference with first non-orthologous sequence - C.parvum:98 C.trachomatis:98

A3FPV9              	100.00%		O84200              	100.00%
Bootstrap support for A3FPV9 as seed ortholog is 100%.
Bootstrap support for O84200 as seed ortholog is 100%.

Group of orthologs #66. Best score 97 bits
Score difference with first non-orthologous sequence - C.parvum:97 C.trachomatis:97

Q5CXI8              	100.00%		O84358              	100.00%
Bootstrap support for Q5CXI8 as seed ortholog is 100%.
Bootstrap support for O84358 as seed ortholog is 100%.

Group of orthologs #67. Best score 93 bits
Score difference with first non-orthologous sequence - C.parvum:31 C.trachomatis:93

A3FQ12              	100.00%		P38004              	100.00%
Bootstrap support for A3FQ12 as seed ortholog is 83%.
Bootstrap support for P38004 as seed ortholog is 100%.

Group of orthologs #68. Best score 87 bits
Score difference with first non-orthologous sequence - C.parvum:87 C.trachomatis:87

Q5CTJ7              	100.00%		P55137              	100.00%
Bootstrap support for Q5CTJ7 as seed ortholog is 100%.
Bootstrap support for P55137 as seed ortholog is 100%.

Group of orthologs #69. Best score 86 bits
Score difference with first non-orthologous sequence - C.parvum:86 C.trachomatis:86

Q5CYJ3              	100.00%		O84530              	100.00%
Bootstrap support for Q5CYJ3 as seed ortholog is 100%.
Bootstrap support for O84530 as seed ortholog is 100%.

Group of orthologs #70. Best score 84 bits
Score difference with first non-orthologous sequence - C.parvum:84 C.trachomatis:84

A3FQK3              	100.00%		P36424              	100.00%
Bootstrap support for A3FQK3 as seed ortholog is 100%.
Bootstrap support for P36424 as seed ortholog is 100%.

Group of orthologs #71. Best score 84 bits
Score difference with first non-orthologous sequence - C.parvum:84 C.trachomatis:84

Q5CV63              	100.00%		O84469              	100.00%
Bootstrap support for Q5CV63 as seed ortholog is 100%.
Bootstrap support for O84469 as seed ortholog is 100%.

Group of orthologs #72. Best score 81 bits
Score difference with first non-orthologous sequence - C.parvum:81 C.trachomatis:81

A3FQF3              	100.00%		O84435              	100.00%
Bootstrap support for A3FQF3 as seed ortholog is 100%.
Bootstrap support for O84435 as seed ortholog is 100%.

Group of orthologs #73. Best score 79 bits
Score difference with first non-orthologous sequence - C.parvum:79 C.trachomatis:79

Q5CSA9              	100.00%		O84650              	100.00%
Bootstrap support for Q5CSA9 as seed ortholog is 100%.
Bootstrap support for O84650 as seed ortholog is 100%.

Group of orthologs #74. Best score 77 bits
Score difference with first non-orthologous sequence - C.parvum:77 C.trachomatis:77

Q5CQA5              	100.00%		O84307              	100.00%
Bootstrap support for Q5CQA5 as seed ortholog is 100%.
Bootstrap support for O84307 as seed ortholog is 100%.

Group of orthologs #75. Best score 77 bits
Score difference with first non-orthologous sequence - C.parvum:77 C.trachomatis:77

Q5CR91              	100.00%		O84544              	100.00%
Bootstrap support for Q5CR91 as seed ortholog is 100%.
Bootstrap support for O84544 as seed ortholog is 100%.

Group of orthologs #76. Best score 77 bits
Score difference with first non-orthologous sequence - C.parvum:77 C.trachomatis:77

Q5CUD1              	100.00%		O84843              	100.00%
Bootstrap support for Q5CUD1 as seed ortholog is 100%.
Bootstrap support for O84843 as seed ortholog is 100%.

Group of orthologs #77. Best score 76 bits
Score difference with first non-orthologous sequence - C.parvum:76 C.trachomatis:76

Q5CSR7              	100.00%		O84390              	100.00%
Bootstrap support for Q5CSR7 as seed ortholog is 100%.
Bootstrap support for O84390 as seed ortholog is 100%.

Group of orthologs #78. Best score 73 bits
Score difference with first non-orthologous sequence - C.parvum:73 C.trachomatis:73

A3FQ96              	100.00%		O84680              	100.00%
A3FPQ1              	12.03%		
A3FQ39              	10.08%		
Q5CSH8              	8.27%		
Bootstrap support for A3FQ96 as seed ortholog is 100%.
Bootstrap support for O84680 as seed ortholog is 100%.

Group of orthologs #79. Best score 69 bits
Score difference with first non-orthologous sequence - C.parvum:24 C.trachomatis:69

Q5CQT5              	100.00%		O84781              	100.00%
Q5CRD8              	25.60%		
Q5CV15              	17.45%		
Bootstrap support for Q5CQT5 as seed ortholog is 65%.
Alternative seed ortholog is Q5CS85 (24 bits away from this cluster)
Bootstrap support for O84781 as seed ortholog is 100%.

Group of orthologs #80. Best score 66 bits
Score difference with first non-orthologous sequence - C.parvum:66 C.trachomatis:66

Q5CUK8              	100.00%		P0CE04              	100.00%
Bootstrap support for Q5CUK8 as seed ortholog is 100%.
Bootstrap support for P0CE04 as seed ortholog is 100%.

Group of orthologs #81. Best score 65 bits
Score difference with first non-orthologous sequence - C.parvum:65 C.trachomatis:65

Q5CTH5              	100.00%		O84128              	100.00%
Bootstrap support for Q5CTH5 as seed ortholog is 100%.
Bootstrap support for O84128 as seed ortholog is 100%.

Group of orthologs #82. Best score 64 bits
Score difference with first non-orthologous sequence - C.parvum:64 C.trachomatis:64

Q5CUU4              	100.00%		O84338              	100.00%
Q5CVS5              	21.09%		
Q5CUE4              	16.64%		
Bootstrap support for Q5CUU4 as seed ortholog is 100%.
Bootstrap support for O84338 as seed ortholog is 100%.

Group of orthologs #83. Best score 64 bits
Score difference with first non-orthologous sequence - C.parvum:64 C.trachomatis:64

Q5CXL5              	100.00%		P0CD81              	100.00%
Bootstrap support for Q5CXL5 as seed ortholog is 100%.
Bootstrap support for P0CD81 as seed ortholog is 100%.

Group of orthologs #84. Best score 62 bits
Score difference with first non-orthologous sequence - C.parvum:62 C.trachomatis:62

Q5CPU2              	100.00%		P0A4C8              	100.00%
Bootstrap support for Q5CPU2 as seed ortholog is 100%.
Bootstrap support for P0A4C8 as seed ortholog is 100%.

Group of orthologs #85. Best score 62 bits
Score difference with first non-orthologous sequence - C.parvum:62 C.trachomatis:62

Q5CX09              	100.00%		O84589              	100.00%
Bootstrap support for Q5CX09 as seed ortholog is 100%.
Bootstrap support for O84589 as seed ortholog is 100%.

Group of orthologs #86. Best score 60 bits
Score difference with first non-orthologous sequence - C.parvum:60 C.trachomatis:60

A3FQ26              	100.00%		P0CD79              	100.00%
Bootstrap support for A3FQ26 as seed ortholog is 100%.
Bootstrap support for P0CD79 as seed ortholog is 100%.

Group of orthologs #87. Best score 59 bits
Score difference with first non-orthologous sequence - C.parvum:59 C.trachomatis:59

A3FQ67              	100.00%		O84851              	100.00%
Bootstrap support for A3FQ67 as seed ortholog is 100%.
Bootstrap support for O84851 as seed ortholog is 100%.

Group of orthologs #88. Best score 58 bits
Score difference with first non-orthologous sequence - C.parvum:58 C.trachomatis:58

A3FQ16              	100.00%		O84147              	100.00%
Q5CS01              	45.59%		
Q5CTW4              	29.14%		
Q5CTY5              	26.36%		
Q5CYL9              	26.07%		
A3FQM1              	19.72%		
Q5CZ29              	16.45%		
Q5CYR9              	16.25%		
Bootstrap support for A3FQ16 as seed ortholog is 100%.
Bootstrap support for O84147 as seed ortholog is 100%.

Group of orthologs #89. Best score 58 bits
Score difference with first non-orthologous sequence - C.parvum:58 C.trachomatis:58

Q5CQB2              	100.00%		O84777              	100.00%
Bootstrap support for Q5CQB2 as seed ortholog is 100%.
Bootstrap support for O84777 as seed ortholog is 100%.

Group of orthologs #90. Best score 58 bits
Score difference with first non-orthologous sequence - C.parvum:58 C.trachomatis:58

Q5CYI1              	100.00%		O84527              	100.00%
Bootstrap support for Q5CYI1 as seed ortholog is 100%.
Bootstrap support for O84527 as seed ortholog is 100%.

Group of orthologs #91. Best score 57 bits
Score difference with first non-orthologous sequence - C.parvum:57 C.trachomatis:57

Q5CTS3              	100.00%		O84496              	100.00%
Bootstrap support for Q5CTS3 as seed ortholog is 100%.
Bootstrap support for O84496 as seed ortholog is 100%.

Group of orthologs #92. Best score 56 bits
Score difference with first non-orthologous sequence - C.parvum:56 C.trachomatis:56

Q5CT60              	100.00%		O84353              	100.00%
Bootstrap support for Q5CT60 as seed ortholog is 100%.
Bootstrap support for O84353 as seed ortholog is 100%.

Group of orthologs #93. Best score 54 bits
Score difference with first non-orthologous sequence - C.parvum:54 C.trachomatis:54

A3FQQ6              	100.00%		O84611              	100.00%
Bootstrap support for A3FQQ6 as seed ortholog is 100%.
Bootstrap support for O84611 as seed ortholog is 100%.

Group of orthologs #94. Best score 53 bits
Score difference with first non-orthologous sequence - C.parvum:53 C.trachomatis:53

Q5CPN1              	100.00%		O84719              	100.00%
Bootstrap support for Q5CPN1 as seed ortholog is 100%.
Bootstrap support for O84719 as seed ortholog is 100%.

Group of orthologs #95. Best score 53 bits
Score difference with first non-orthologous sequence - C.parvum:53 C.trachomatis:53

Q5CXS0              	100.00%		O84294              	100.00%
Bootstrap support for Q5CXS0 as seed ortholog is 100%.
Bootstrap support for O84294 as seed ortholog is 100%.

Group of orthologs #96. Best score 52 bits
Score difference with first non-orthologous sequence - C.parvum:52 C.trachomatis:52

Q5CWP0              	100.00%		P0CE06              	100.00%
Bootstrap support for Q5CWP0 as seed ortholog is 100%.
Bootstrap support for P0CE06 as seed ortholog is 100%.

Group of orthologs #97. Best score 51 bits
Score difference with first non-orthologous sequence - C.parvum:51 C.trachomatis:51

Q5CZ15              	100.00%		P26623              	100.00%
Bootstrap support for Q5CZ15 as seed ortholog is 100%.
Bootstrap support for P26623 as seed ortholog is 100%.

Group of orthologs #98. Best score 50 bits
Score difference with first non-orthologous sequence - C.parvum:50 C.trachomatis:50

Q5CXT1              	100.00%		P0CE02              	100.00%
Bootstrap support for Q5CXT1 as seed ortholog is 100%.
Bootstrap support for P0CE02 as seed ortholog is 100%.

Group of orthologs #99. Best score 47 bits
Score difference with first non-orthologous sequence - C.parvum:47 C.trachomatis:47

A3FPT1              	100.00%		P66370              	100.00%
Bootstrap support for A3FPT1 as seed ortholog is 100%.
Bootstrap support for P66370 as seed ortholog is 100%.

Group of orthologs #100. Best score 47 bits
Score difference with first non-orthologous sequence - C.parvum:47 C.trachomatis:47

Q5CS24              	100.00%		O84219              	100.00%
Bootstrap support for Q5CS24 as seed ortholog is 100%.
Bootstrap support for O84219 as seed ortholog is 100%.

Group of orthologs #101. Best score 47 bits
Score difference with first non-orthologous sequence - C.parvum:47 C.trachomatis:47

Q5CRM4              	100.00%		O84762              	100.00%
Bootstrap support for Q5CRM4 as seed ortholog is 100%.
Bootstrap support for O84762 as seed ortholog is 100%.

Group of orthologs #102. Best score 47 bits
Score difference with first non-orthologous sequence - C.parvum:47 C.trachomatis:47

Q5CTI3              	100.00%		O84730              	100.00%
Bootstrap support for Q5CTI3 as seed ortholog is 100%.
Bootstrap support for O84730 as seed ortholog is 100%.

Group of orthologs #103. Best score 47 bits
Score difference with first non-orthologous sequence - C.parvum:47 C.trachomatis:47

Q5CZ11              	100.00%		O84733              	100.00%
Bootstrap support for Q5CZ11 as seed ortholog is 100%.
Bootstrap support for O84733 as seed ortholog is 100%.

Group of orthologs #104. Best score 46 bits
Score difference with first non-orthologous sequence - C.parvum:46 C.trachomatis:46

Q5CS33              	100.00%		P0CD80              	100.00%
Q5CYN2              	39.69%		
Bootstrap support for Q5CS33 as seed ortholog is 100%.
Bootstrap support for P0CD80 as seed ortholog is 100%.

Group of orthologs #105. Best score 46 bits
Score difference with first non-orthologous sequence - C.parvum:46 C.trachomatis:46

Q5CTM4              	100.00%		O84665              	100.00%
                    	       		O84108              	10.88%
Bootstrap support for Q5CTM4 as seed ortholog is 100%.
Bootstrap support for O84665 as seed ortholog is 100%.

Group of orthologs #106. Best score 46 bits
Score difference with first non-orthologous sequence - C.parvum:46 C.trachomatis:46

Q5CUN6              	100.00%		O84687              	100.00%
Bootstrap support for Q5CUN6 as seed ortholog is 100%.
Bootstrap support for O84687 as seed ortholog is 100%.

Group of orthologs #107. Best score 43 bits
Score difference with first non-orthologous sequence - C.parvum:43 C.trachomatis:43

Q5CX79              	100.00%		P0CD88              	100.00%
Bootstrap support for Q5CX79 as seed ortholog is 100%.
Bootstrap support for P0CD88 as seed ortholog is 100%.