###################################
141 groups of orthologs
144 in-paralogs from C.trachomatis
193 in-paralogs from L.infantum
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 894 bits
Score difference with first non-orthologous sequence - C.trachomatis:785 L.infantum:894

O84022              	100.00%		A4IDX6              	100.00%
Bootstrap support for O84022 as seed ortholog is 100%.
Bootstrap support for A4IDX6 as seed ortholog is 100%.

Group of orthologs #2. Best score 703 bits
Score difference with first non-orthologous sequence - C.trachomatis:135 L.infantum:20

O84115              	100.00%		A4I4I4              	100.00%
Bootstrap support for O84115 as seed ortholog is 99%.
Bootstrap support for A4I4I4 as seed ortholog is 69%.
Alternative seed ortholog is A4HRR6 (20 bits away from this cluster)

Group of orthologs #3. Best score 654 bits
Score difference with first non-orthologous sequence - C.trachomatis:654 L.infantum:112

P17821              	100.00%		A4I5S5              	100.00%
                    	       		A4I5T0              	100.00%
                    	       		A4I5S9              	98.27%
                    	       		A4I5S4              	77.55%
Bootstrap support for P17821 as seed ortholog is 100%.
Bootstrap support for A4I5S5 as seed ortholog is 99%.
Bootstrap support for A4I5T0 as seed ortholog is 99%.

Group of orthologs #4. Best score 547 bits
Score difference with first non-orthologous sequence - C.trachomatis:369 L.infantum:202

P0C0Z7              	100.00%		A4IDH5              	100.00%
                    	       		A4IDH4              	69.45%
                    	       		A4I800              	12.33%
Bootstrap support for P0C0Z7 as seed ortholog is 100%.
Bootstrap support for A4IDH5 as seed ortholog is 100%.

Group of orthologs #5. Best score 520 bits
Score difference with first non-orthologous sequence - C.trachomatis:398 L.infantum:437

O84304              	100.00%		A4I5Z4              	100.00%
Bootstrap support for O84304 as seed ortholog is 100%.
Bootstrap support for A4I5Z4 as seed ortholog is 100%.

Group of orthologs #6. Best score 497 bits
Score difference with first non-orthologous sequence - C.trachomatis:497 L.infantum:497

O84057              	100.00%		A4I2P6              	100.00%
                    	       		A4ID50              	100.00%
Bootstrap support for O84057 as seed ortholog is 100%.
Bootstrap support for A4I2P6 as seed ortholog is 100%.
Bootstrap support for A4ID50 as seed ortholog is 100%.

Group of orthologs #7. Best score 493 bits
Score difference with first non-orthologous sequence - C.trachomatis:493 L.infantum:493

O84755              	100.00%		A4I115              	100.00%
Bootstrap support for O84755 as seed ortholog is 100%.
Bootstrap support for A4I115 as seed ortholog is 100%.

Group of orthologs #8. Best score 452 bits
Score difference with first non-orthologous sequence - C.trachomatis:452 L.infantum:452

O84754              	100.00%		A4I013              	100.00%
Bootstrap support for O84754 as seed ortholog is 100%.
Bootstrap support for A4I013 as seed ortholog is 100%.

Group of orthologs #9. Best score 447 bits
Score difference with first non-orthologous sequence - C.trachomatis:447 L.infantum:447

O84834              	100.00%		A4I3G6              	100.00%
Bootstrap support for O84834 as seed ortholog is 100%.
Bootstrap support for A4I3G6 as seed ortholog is 100%.

Group of orthologs #10. Best score 441 bits
Score difference with first non-orthologous sequence - C.trachomatis:441 L.infantum:141

O84444              	100.00%		A4ICS8              	100.00%
Bootstrap support for O84444 as seed ortholog is 100%.
Bootstrap support for A4ICS8 as seed ortholog is 99%.

Group of orthologs #11. Best score 422 bits
Score difference with first non-orthologous sequence - C.trachomatis:422 L.infantum:422

O84392              	100.00%		A4IB83              	100.00%
Bootstrap support for O84392 as seed ortholog is 100%.
Bootstrap support for A4IB83 as seed ortholog is 100%.

Group of orthologs #12. Best score 415 bits
Score difference with first non-orthologous sequence - C.trachomatis:415 L.infantum:415

O84126              	100.00%		A4HRC6              	100.00%
Bootstrap support for O84126 as seed ortholog is 100%.
Bootstrap support for A4HRC6 as seed ortholog is 100%.

Group of orthologs #13. Best score 413 bits
Score difference with first non-orthologous sequence - C.trachomatis:339 L.infantum:413

O84585              	100.00%		A4IB34              	100.00%
Bootstrap support for O84585 as seed ortholog is 100%.
Bootstrap support for A4IB34 as seed ortholog is 100%.

Group of orthologs #14. Best score 404 bits
Score difference with first non-orthologous sequence - C.trachomatis:404 L.infantum:404

O84460              	100.00%		A4I2T4              	100.00%
Bootstrap support for O84460 as seed ortholog is 100%.
Bootstrap support for A4I2T4 as seed ortholog is 100%.

Group of orthologs #15. Best score 396 bits
Score difference with first non-orthologous sequence - C.trachomatis:396 L.infantum:396

Q59321              	100.00%		A4HYQ5              	100.00%
Bootstrap support for Q59321 as seed ortholog is 100%.
Bootstrap support for A4HYQ5 as seed ortholog is 100%.

Group of orthologs #16. Best score 387 bits
Score difference with first non-orthologous sequence - C.trachomatis:387 L.infantum:231

P0CD71              	100.00%		E9AGQ3              	100.00%
Bootstrap support for P0CD71 as seed ortholog is 100%.
Bootstrap support for E9AGQ3 as seed ortholog is 99%.

Group of orthologs #17. Best score 380 bits
Score difference with first non-orthologous sequence - C.trachomatis:380 L.infantum:68

P0CE13              	100.00%		A4IDK9              	100.00%
Bootstrap support for P0CE13 as seed ortholog is 100%.
Bootstrap support for A4IDK9 as seed ortholog is 97%.

Group of orthologs #18. Best score 373 bits
Score difference with first non-orthologous sequence - C.trachomatis:373 L.infantum:373

O84310              	100.00%		A4IAD4              	100.00%
Bootstrap support for O84310 as seed ortholog is 100%.
Bootstrap support for A4IAD4 as seed ortholog is 100%.

Group of orthologs #19. Best score 373 bits
Score difference with first non-orthologous sequence - C.trachomatis:373 L.infantum:35

O84848              	100.00%		A4ICH8              	100.00%
Bootstrap support for O84848 as seed ortholog is 100%.
Bootstrap support for A4ICH8 as seed ortholog is 84%.

Group of orthologs #20. Best score 351 bits
Score difference with first non-orthologous sequence - C.trachomatis:351 L.infantum:351

O84591              	100.00%		A4HW62              	100.00%
Bootstrap support for O84591 as seed ortholog is 100%.
Bootstrap support for A4HW62 as seed ortholog is 100%.

Group of orthologs #21. Best score 334 bits
Score difference with first non-orthologous sequence - C.trachomatis:334 L.infantum:213

O84067              	100.00%		A4I9M7              	100.00%
Bootstrap support for O84067 as seed ortholog is 100%.
Bootstrap support for A4I9M7 as seed ortholog is 99%.

Group of orthologs #22. Best score 324 bits
Score difference with first non-orthologous sequence - C.trachomatis:324 L.infantum:324

O84829              	100.00%		A4I1R2              	100.00%
Bootstrap support for O84829 as seed ortholog is 100%.
Bootstrap support for A4I1R2 as seed ortholog is 100%.

Group of orthologs #23. Best score 322 bits
Score difference with first non-orthologous sequence - C.trachomatis:322 L.infantum:322

P0CD78              	100.00%		E9AGT9              	100.00%
                    	       		E9AGU0              	100.00%
                    	       		A4I628              	6.43%
Bootstrap support for P0CD78 as seed ortholog is 100%.
Bootstrap support for E9AGT9 as seed ortholog is 100%.
Bootstrap support for E9AGU0 as seed ortholog is 100%.

Group of orthologs #24. Best score 314 bits
Score difference with first non-orthologous sequence - C.trachomatis:314 L.infantum:314

O84823              	100.00%		A4HSY7              	100.00%
Bootstrap support for O84823 as seed ortholog is 100%.
Bootstrap support for A4HSY7 as seed ortholog is 100%.

Group of orthologs #25. Best score 300 bits
Score difference with first non-orthologous sequence - C.trachomatis:300 L.infantum:88

O84248              	100.00%		A4I1L9              	100.00%
Bootstrap support for O84248 as seed ortholog is 100%.
Bootstrap support for A4I1L9 as seed ortholog is 99%.

Group of orthologs #26. Best score 299 bits
Score difference with first non-orthologous sequence - C.trachomatis:299 L.infantum:299

O84066              	100.00%		Q18L04              	100.00%
Bootstrap support for O84066 as seed ortholog is 100%.
Bootstrap support for Q18L04 as seed ortholog is 100%.

Group of orthologs #27. Best score 295 bits
Score difference with first non-orthologous sequence - C.trachomatis:238 L.infantum:114

O84561              	100.00%		A4I8F6              	100.00%
Bootstrap support for O84561 as seed ortholog is 100%.
Bootstrap support for A4I8F6 as seed ortholog is 99%.

Group of orthologs #28. Best score 285 bits
Score difference with first non-orthologous sequence - C.trachomatis:285 L.infantum:285

O84786              	100.00%		A4HWC4              	100.00%
Bootstrap support for O84786 as seed ortholog is 100%.
Bootstrap support for A4HWC4 as seed ortholog is 100%.

Group of orthologs #29. Best score 280 bits
Score difference with first non-orthologous sequence - C.trachomatis:280 L.infantum:280

P0CE21              	100.00%		A4IAQ1              	100.00%
                    	       		A4IAQ4              	78.07%
Bootstrap support for P0CE21 as seed ortholog is 100%.
Bootstrap support for A4IAQ1 as seed ortholog is 100%.

Group of orthologs #30. Best score 280 bits
Score difference with first non-orthologous sequence - C.trachomatis:280 L.infantum:280

P0CD72              	100.00%		E9AGE1              	100.00%
Bootstrap support for P0CD72 as seed ortholog is 100%.
Bootstrap support for E9AGE1 as seed ortholog is 100%.

Group of orthologs #31. Best score 279 bits
Score difference with first non-orthologous sequence - C.trachomatis:279 L.infantum:279

O84188              	100.00%		A2CIJ8              	100.00%
Bootstrap support for O84188 as seed ortholog is 100%.
Bootstrap support for A2CIJ8 as seed ortholog is 100%.

Group of orthologs #32. Best score 275 bits
Score difference with first non-orthologous sequence - C.trachomatis:275 L.infantum:275

O84315              	100.00%		A4HWX3              	100.00%
Bootstrap support for O84315 as seed ortholog is 100%.
Bootstrap support for A4HWX3 as seed ortholog is 100%.

Group of orthologs #33. Best score 266 bits
Score difference with first non-orthologous sequence - C.trachomatis:266 L.infantum:266

O84098              	100.00%		A4HZZ5              	100.00%
Bootstrap support for O84098 as seed ortholog is 100%.
Bootstrap support for A4HZZ5 as seed ortholog is 100%.

Group of orthologs #34. Best score 264 bits
Score difference with first non-orthologous sequence - C.trachomatis:264 L.infantum:264

O84831              	100.00%		A4HT59              	100.00%
Bootstrap support for O84831 as seed ortholog is 100%.
Bootstrap support for A4HT59 as seed ortholog is 100%.

Group of orthologs #35. Best score 258 bits
Score difference with first non-orthologous sequence - C.trachomatis:258 L.infantum:258

O84316              	100.00%		A4I766              	100.00%
                    	       		A4I9K6              	9.71%
Bootstrap support for O84316 as seed ortholog is 100%.
Bootstrap support for A4I766 as seed ortholog is 100%.

Group of orthologs #36. Best score 253 bits
Score difference with first non-orthologous sequence - C.trachomatis:253 L.infantum:253

O84828              	100.00%		A4ID83              	100.00%
Bootstrap support for O84828 as seed ortholog is 100%.
Bootstrap support for A4ID83 as seed ortholog is 100%.

Group of orthologs #37. Best score 250 bits
Score difference with first non-orthologous sequence - C.trachomatis:250 L.infantum:205

O84352              	100.00%		A4HRS7              	100.00%
                    	       		A4I8P8              	6.68%
Bootstrap support for O84352 as seed ortholog is 100%.
Bootstrap support for A4HRS7 as seed ortholog is 100%.

Group of orthologs #38. Best score 250 bits
Score difference with first non-orthologous sequence - C.trachomatis:87 L.infantum:126

O84058              	100.00%		A4I3X3              	100.00%
Bootstrap support for O84058 as seed ortholog is 98%.
Bootstrap support for A4I3X3 as seed ortholog is 99%.

Group of orthologs #39. Best score 247 bits
Score difference with first non-orthologous sequence - C.trachomatis:247 L.infantum:247

O84439              	100.00%		A4I3W7              	100.00%
                    	       		A4HW78              	42.49%
Bootstrap support for O84439 as seed ortholog is 100%.
Bootstrap support for A4I3W7 as seed ortholog is 100%.

Group of orthologs #40. Best score 246 bits
Score difference with first non-orthologous sequence - C.trachomatis:246 L.infantum:9

O84094              	100.00%		A4I330              	100.00%
Bootstrap support for O84094 as seed ortholog is 100%.
Bootstrap support for A4I330 as seed ortholog is 60%.
Alternative seed ortholog is A4I2Y9 (9 bits away from this cluster)

Group of orthologs #41. Best score 246 bits
Score difference with first non-orthologous sequence - C.trachomatis:246 L.infantum:246

O84309              	100.00%		A4I3X4              	100.00%
Bootstrap support for O84309 as seed ortholog is 100%.
Bootstrap support for A4I3X4 as seed ortholog is 100%.

Group of orthologs #42. Best score 246 bits
Score difference with first non-orthologous sequence - C.trachomatis:246 L.infantum:246

O84787              	100.00%		E9AGB4              	100.00%
Bootstrap support for O84787 as seed ortholog is 100%.
Bootstrap support for E9AGB4 as seed ortholog is 100%.

Group of orthologs #43. Best score 242 bits
Score difference with first non-orthologous sequence - C.trachomatis:242 L.infantum:242

O84642              	100.00%		E9AH48              	100.00%
Bootstrap support for O84642 as seed ortholog is 100%.
Bootstrap support for E9AH48 as seed ortholog is 100%.

Group of orthologs #44. Best score 238 bits
Score difference with first non-orthologous sequence - C.trachomatis:238 L.infantum:67

O84698              	100.00%		A4HUP5              	100.00%
                    	       		A4HYJ6              	56.23%
                    	       		E9AG39              	36.72%
Bootstrap support for O84698 as seed ortholog is 100%.
Bootstrap support for A4HUP5 as seed ortholog is 78%.

Group of orthologs #45. Best score 235 bits
Score difference with first non-orthologous sequence - C.trachomatis:235 L.infantum:235

O84562              	100.00%		A4HY57              	100.00%
Bootstrap support for O84562 as seed ortholog is 100%.
Bootstrap support for A4HY57 as seed ortholog is 100%.

Group of orthologs #46. Best score 233 bits
Score difference with first non-orthologous sequence - C.trachomatis:233 L.infantum:32

O84345              	100.00%		A4HS91              	100.00%
Bootstrap support for O84345 as seed ortholog is 100%.
Bootstrap support for A4HS91 as seed ortholog is 79%.

Group of orthologs #47. Best score 233 bits
Score difference with first non-orthologous sequence - C.trachomatis:233 L.infantum:87

O84049              	100.00%		A4I0E4              	100.00%
Bootstrap support for O84049 as seed ortholog is 100%.
Bootstrap support for A4I0E4 as seed ortholog is 99%.

Group of orthologs #48. Best score 233 bits
Score difference with first non-orthologous sequence - C.trachomatis:104 L.infantum:79

O84249              	100.00%		A4ICH2              	100.00%
Bootstrap support for O84249 as seed ortholog is 98%.
Bootstrap support for A4ICH2 as seed ortholog is 89%.

Group of orthologs #49. Best score 231 bits
Score difference with first non-orthologous sequence - C.trachomatis:231 L.infantum:177

O84381              	100.00%		A4I421              	100.00%
Bootstrap support for O84381 as seed ortholog is 100%.
Bootstrap support for A4I421 as seed ortholog is 100%.

Group of orthologs #50. Best score 231 bits
Score difference with first non-orthologous sequence - C.trachomatis:231 L.infantum:189

O84297              	100.00%		A4IAE6              	100.00%
Bootstrap support for O84297 as seed ortholog is 100%.
Bootstrap support for A4IAE6 as seed ortholog is 99%.

Group of orthologs #51. Best score 223 bits
Score difference with first non-orthologous sequence - C.trachomatis:223 L.infantum:72

O84081              	100.00%		A4I1W8              	100.00%
Bootstrap support for O84081 as seed ortholog is 100%.
Bootstrap support for A4I1W8 as seed ortholog is 98%.

Group of orthologs #52. Best score 223 bits
Score difference with first non-orthologous sequence - C.trachomatis:223 L.infantum:149

O84596              	100.00%		E9AH70              	100.00%
Bootstrap support for O84596 as seed ortholog is 100%.
Bootstrap support for E9AH70 as seed ortholog is 100%.

Group of orthologs #53. Best score 212 bits
Score difference with first non-orthologous sequence - C.trachomatis:212 L.infantum:212

P0CE09              	100.00%		A4I6A8              	100.00%
                    	       		E9AGT7              	16.83%
Bootstrap support for P0CE09 as seed ortholog is 100%.
Bootstrap support for A4I6A8 as seed ortholog is 100%.

Group of orthologs #54. Best score 212 bits
Score difference with first non-orthologous sequence - C.trachomatis:212 L.infantum:212

O84775              	100.00%		A4I9B2              	100.00%
Bootstrap support for O84775 as seed ortholog is 100%.
Bootstrap support for A4I9B2 as seed ortholog is 100%.

Group of orthologs #55. Best score 212 bits
Score difference with first non-orthologous sequence - C.trachomatis:212 L.infantum:11

O84797              	100.00%		A4IDG7              	100.00%
Bootstrap support for O84797 as seed ortholog is 100%.
Bootstrap support for A4IDG7 as seed ortholog is 57%.
Alternative seed ortholog is A4I8Q5 (11 bits away from this cluster)

Group of orthologs #56. Best score 203 bits
Score difference with first non-orthologous sequence - C.trachomatis:203 L.infantum:203

O84423              	100.00%		A4ID87              	100.00%
Bootstrap support for O84423 as seed ortholog is 100%.
Bootstrap support for A4ID87 as seed ortholog is 100%.

Group of orthologs #57. Best score 202 bits
Score difference with first non-orthologous sequence - C.trachomatis:202 L.infantum:202

O84859              	100.00%		A4HY76              	100.00%
Bootstrap support for O84859 as seed ortholog is 100%.
Bootstrap support for A4HY76 as seed ortholog is 100%.

Group of orthologs #58. Best score 191 bits
Score difference with first non-orthologous sequence - C.trachomatis:191 L.infantum:191

O84332              	100.00%		A4I0S4              	100.00%
Bootstrap support for O84332 as seed ortholog is 100%.
Bootstrap support for A4I0S4 as seed ortholog is 100%.

Group of orthologs #59. Best score 184 bits
Score difference with first non-orthologous sequence - C.trachomatis:184 L.infantum:184

O84734              	100.00%		A4HUS2              	100.00%
Bootstrap support for O84734 as seed ortholog is 100%.
Bootstrap support for A4HUS2 as seed ortholog is 100%.

Group of orthologs #60. Best score 178 bits
Score difference with first non-orthologous sequence - C.trachomatis:178 L.infantum:178

O84608              	100.00%		Q95U89              	100.00%
                    	       		A4HWK2              	12.01%
Bootstrap support for O84608 as seed ortholog is 100%.
Bootstrap support for Q95U89 as seed ortholog is 100%.

Group of orthologs #61. Best score 178 bits
Score difference with first non-orthologous sequence - C.trachomatis:178 L.infantum:77

O84028              	100.00%		A4I0R1              	100.00%
Bootstrap support for O84028 as seed ortholog is 100%.
Bootstrap support for A4I0R1 as seed ortholog is 98%.

Group of orthologs #62. Best score 178 bits
Score difference with first non-orthologous sequence - C.trachomatis:178 L.infantum:178

O84812              	100.00%		A4I7B5              	100.00%
Bootstrap support for O84812 as seed ortholog is 100%.
Bootstrap support for A4I7B5 as seed ortholog is 100%.

Group of orthologs #63. Best score 167 bits
Score difference with first non-orthologous sequence - C.trachomatis:167 L.infantum:167

O84613              	100.00%		A4HXS3              	100.00%
Bootstrap support for O84613 as seed ortholog is 100%.
Bootstrap support for A4HXS3 as seed ortholog is 100%.

Group of orthologs #64. Best score 166 bits
Score difference with first non-orthologous sequence - C.trachomatis:166 L.infantum:166

O84266              	100.00%		A4I8D3              	100.00%
Bootstrap support for O84266 as seed ortholog is 100%.
Bootstrap support for A4I8D3 as seed ortholog is 100%.

Group of orthologs #65. Best score 158 bits
Score difference with first non-orthologous sequence - C.trachomatis:158 L.infantum:158

O84035              	100.00%		A4HZ82              	100.00%
Bootstrap support for O84035 as seed ortholog is 100%.
Bootstrap support for A4HZ82 as seed ortholog is 100%.

Group of orthologs #66. Best score 157 bits
Score difference with first non-orthologous sequence - C.trachomatis:157 L.infantum:157

O84402              	100.00%		A4I3B7              	100.00%
                    	       		A4I3A3              	5.58%
Bootstrap support for O84402 as seed ortholog is 100%.
Bootstrap support for A4I3B7 as seed ortholog is 100%.

Group of orthologs #67. Best score 155 bits
Score difference with first non-orthologous sequence - C.trachomatis:155 L.infantum:65

O84247              	100.00%		A4HY08              	100.00%
Bootstrap support for O84247 as seed ortholog is 100%.
Bootstrap support for A4HY08 as seed ortholog is 95%.

Group of orthologs #68. Best score 155 bits
Score difference with first non-orthologous sequence - C.trachomatis:155 L.infantum:45

O84649              	100.00%		A4HZ99              	100.00%
Bootstrap support for O84649 as seed ortholog is 100%.
Bootstrap support for A4HZ99 as seed ortholog is 42%.
Alternative seed ortholog is A4IDA8 (45 bits away from this cluster)

Group of orthologs #69. Best score 153 bits
Score difference with first non-orthologous sequence - C.trachomatis:153 L.infantum:24

O84676              	100.00%		A4I1G1              	100.00%
O84722              	13.71%		E8NHD0              	48.60%
                    	       		A4I1G0              	41.40%
Bootstrap support for O84676 as seed ortholog is 100%.
Bootstrap support for A4I1G1 as seed ortholog is 76%.

Group of orthologs #70. Best score 153 bits
Score difference with first non-orthologous sequence - C.trachomatis:53 L.infantum:153

O84154              	100.00%		A4HUR6              	100.00%
Bootstrap support for O84154 as seed ortholog is 96%.
Bootstrap support for A4HUR6 as seed ortholog is 100%.

Group of orthologs #71. Best score 149 bits
Score difference with first non-orthologous sequence - C.trachomatis:149 L.infantum:149

O84196              	100.00%		A4I5K7              	100.00%
Bootstrap support for O84196 as seed ortholog is 100%.
Bootstrap support for A4I5K7 as seed ortholog is 100%.

Group of orthologs #72. Best score 148 bits
Score difference with first non-orthologous sequence - C.trachomatis:148 L.infantum:148

O84546              	100.00%		A4I574              	100.00%
                    	       		E9AGV6              	22.78%
Bootstrap support for O84546 as seed ortholog is 100%.
Bootstrap support for A4I574 as seed ortholog is 100%.

Group of orthologs #73. Best score 148 bits
Score difference with first non-orthologous sequence - C.trachomatis:148 L.infantum:148

O84614              	100.00%		A4HTY0              	100.00%
Bootstrap support for O84614 as seed ortholog is 100%.
Bootstrap support for A4HTY0 as seed ortholog is 100%.

Group of orthologs #74. Best score 145 bits
Score difference with first non-orthologous sequence - C.trachomatis:145 L.infantum:145

O84719              	100.00%		A4HUG3              	100.00%
Bootstrap support for O84719 as seed ortholog is 100%.
Bootstrap support for A4HUG3 as seed ortholog is 100%.

Group of orthologs #75. Best score 143 bits
Score difference with first non-orthologous sequence - C.trachomatis:143 L.infantum:143

O84026              	100.00%		A4I1J1              	100.00%
O84465              	5.87%		
Bootstrap support for O84026 as seed ortholog is 100%.
Bootstrap support for A4I1J1 as seed ortholog is 100%.

Group of orthologs #76. Best score 137 bits
Score difference with first non-orthologous sequence - C.trachomatis:137 L.infantum:137

O84109              	100.00%		A4I3U3              	100.00%
Bootstrap support for O84109 as seed ortholog is 100%.
Bootstrap support for A4I3U3 as seed ortholog is 100%.

Group of orthologs #77. Best score 131 bits
Score difference with first non-orthologous sequence - C.trachomatis:131 L.infantum:58

O84732              	100.00%		A4HRZ6              	100.00%
                    	       		A4IBA6              	12.63%
                    	       		A4HXD4              	9.01%
                    	       		A4I8W5              	7.94%
                    	       		A4HTF0              	6.98%
                    	       		A4HY22              	6.61%
                    	       		A4HY23              	6.61%
Bootstrap support for O84732 as seed ortholog is 100%.
Bootstrap support for A4HRZ6 as seed ortholog is 96%.

Group of orthologs #78. Best score 131 bits
Score difference with first non-orthologous sequence - C.trachomatis:131 L.infantum:131

O84296              	100.00%		A4HTI0              	100.00%
                    	       		A4I884              	13.73%
                    	       		A4I7Z7              	6.72%
                    	       		A4I7Z8              	5.60%
Bootstrap support for O84296 as seed ortholog is 100%.
Bootstrap support for A4HTI0 as seed ortholog is 100%.

Group of orthologs #79. Best score 130 bits
Score difference with first non-orthologous sequence - C.trachomatis:130 L.infantum:130

O84123              	100.00%		A4I928              	100.00%
                    	       		A4IBQ7              	19.75%
Bootstrap support for O84123 as seed ortholog is 100%.
Bootstrap support for A4I928 as seed ortholog is 100%.

Group of orthologs #80. Best score 128 bits
Score difference with first non-orthologous sequence - C.trachomatis:20 L.infantum:128

O84260              	100.00%		A4I2Q8              	100.00%
                    	       		E9AHW5              	6.94%
Bootstrap support for O84260 as seed ortholog is 55%.
Alternative seed ortholog is O84693 (20 bits away from this cluster)
Bootstrap support for A4I2Q8 as seed ortholog is 100%.

Group of orthologs #81. Best score 127 bits
Score difference with first non-orthologous sequence - C.trachomatis:127 L.infantum:127

O84835              	100.00%		A4I2X5              	100.00%
                    	       		E9AGZ9              	100.00%
Bootstrap support for O84835 as seed ortholog is 100%.
Bootstrap support for A4I2X5 as seed ortholog is 100%.
Bootstrap support for E9AGZ9 as seed ortholog is 100%.

Group of orthologs #82. Best score 124 bits
Score difference with first non-orthologous sequence - C.trachomatis:124 L.infantum:124

O84289              	100.00%		A4HT56              	100.00%
Bootstrap support for O84289 as seed ortholog is 100%.
Bootstrap support for A4HT56 as seed ortholog is 100%.

Group of orthologs #83. Best score 124 bits
Score difference with first non-orthologous sequence - C.trachomatis:124 L.infantum:124

O84709              	100.00%		A4I1W4              	100.00%
Bootstrap support for O84709 as seed ortholog is 100%.
Bootstrap support for A4I1W4 as seed ortholog is 100%.

Group of orthologs #84. Best score 123 bits
Score difference with first non-orthologous sequence - C.trachomatis:123 L.infantum:123

O84668              	100.00%		A4I3V9              	100.00%
O84193              	12.54%		A4HWL4              	20.00%
Bootstrap support for O84668 as seed ortholog is 100%.
Bootstrap support for A4I3V9 as seed ortholog is 100%.

Group of orthologs #85. Best score 121 bits
Score difference with first non-orthologous sequence - C.trachomatis:121 L.infantum:121

O84781              	100.00%		A4HYB7              	100.00%
                    	       		A4HYA8              	62.00%
                    	       		E9AGS5              	61.91%
                    	       		E9AGS6              	61.63%
Bootstrap support for O84781 as seed ortholog is 100%.
Bootstrap support for A4HYB7 as seed ortholog is 100%.

Group of orthologs #86. Best score 119 bits
Score difference with first non-orthologous sequence - C.trachomatis:119 L.infantum:9

O84130              	100.00%		A4ICK0              	100.00%
Bootstrap support for O84130 as seed ortholog is 100%.
Bootstrap support for A4ICK0 as seed ortholog is 63%.
Alternative seed ortholog is A4I9I0 (9 bits away from this cluster)

Group of orthologs #87. Best score 119 bits
Score difference with first non-orthologous sequence - C.trachomatis:119 L.infantum:119

O84508              	100.00%		Q9GP00              	100.00%
Bootstrap support for O84508 as seed ortholog is 100%.
Bootstrap support for Q9GP00 as seed ortholog is 100%.

Group of orthologs #88. Best score 116 bits
Score difference with first non-orthologous sequence - C.trachomatis:116 L.infantum:28

P38004              	100.00%		A4I345              	100.00%
Bootstrap support for P38004 as seed ortholog is 100%.
Bootstrap support for A4I345 as seed ortholog is 82%.

Group of orthologs #89. Best score 111 bits
Score difference with first non-orthologous sequence - C.trachomatis:111 L.infantum:111

O84547              	100.00%		A4I591              	100.00%
Bootstrap support for O84547 as seed ortholog is 100%.
Bootstrap support for A4I591 as seed ortholog is 100%.

Group of orthologs #90. Best score 111 bits
Score difference with first non-orthologous sequence - C.trachomatis:111 L.infantum:111

O84033              	100.00%		A4I8X4              	100.00%
Bootstrap support for O84033 as seed ortholog is 100%.
Bootstrap support for A4I8X4 as seed ortholog is 100%.

Group of orthologs #91. Best score 106 bits
Score difference with first non-orthologous sequence - C.trachomatis:106 L.infantum:106

O84456              	100.00%		A4HVD8              	100.00%
Bootstrap support for O84456 as seed ortholog is 100%.
Bootstrap support for A4HVD8 as seed ortholog is 100%.

Group of orthologs #92. Best score 106 bits
Score difference with first non-orthologous sequence - C.trachomatis:106 L.infantum:106

O84720              	100.00%		E9AHS0              	100.00%
Bootstrap support for O84720 as seed ortholog is 100%.
Bootstrap support for E9AHS0 as seed ortholog is 100%.

Group of orthologs #93. Best score 97 bits
Score difference with first non-orthologous sequence - C.trachomatis:97 L.infantum:31

O84530              	100.00%		A4I8K8              	100.00%
Bootstrap support for O84530 as seed ortholog is 100%.
Bootstrap support for A4I8K8 as seed ortholog is 82%.

Group of orthologs #94. Best score 94 bits
Score difference with first non-orthologous sequence - C.trachomatis:94 L.infantum:15

O84358              	100.00%		A4I515              	100.00%
Bootstrap support for O84358 as seed ortholog is 100%.
Bootstrap support for A4I515 as seed ortholog is 76%.

Group of orthologs #95. Best score 94 bits
Score difference with first non-orthologous sequence - C.trachomatis:94 L.infantum:94

O84200              	100.00%		A4I6A3              	100.00%
Bootstrap support for O84200 as seed ortholog is 100%.
Bootstrap support for A4I6A3 as seed ortholog is 100%.

Group of orthologs #96. Best score 91 bits
Score difference with first non-orthologous sequence - C.trachomatis:91 L.infantum:91

O84843              	100.00%		A4I7Q3              	100.00%
Bootstrap support for O84843 as seed ortholog is 100%.
Bootstrap support for A4I7Q3 as seed ortholog is 100%.

Group of orthologs #97. Best score 86 bits
Score difference with first non-orthologous sequence - C.trachomatis:86 L.infantum:37

O84665              	100.00%		A4I5M1              	100.00%
Bootstrap support for O84665 as seed ortholog is 100%.
Bootstrap support for A4I5M1 as seed ortholog is 54%.
Alternative seed ortholog is A4HRE9 (37 bits away from this cluster)

Group of orthologs #98. Best score 85 bits
Score difference with first non-orthologous sequence - C.trachomatis:85 L.infantum:85

O84822              	100.00%		A4HTA8              	100.00%
Bootstrap support for O84822 as seed ortholog is 100%.
Bootstrap support for A4HTA8 as seed ortholog is 100%.

Group of orthologs #99. Best score 85 bits
Score difference with first non-orthologous sequence - C.trachomatis:85 L.infantum:85

O84435              	100.00%		A4IC78              	100.00%
Bootstrap support for O84435 as seed ortholog is 100%.
Bootstrap support for A4IC78 as seed ortholog is 100%.

Group of orthologs #100. Best score 84 bits
Score difference with first non-orthologous sequence - C.trachomatis:84 L.infantum:84

O84442              	100.00%		A4IA43              	100.00%
                    	       		A4I3K3              	6.83%
                    	       		A4IDQ0              	6.66%
Bootstrap support for O84442 as seed ortholog is 100%.
Bootstrap support for A4IA43 as seed ortholog is 100%.

Group of orthologs #101. Best score 84 bits
Score difference with first non-orthologous sequence - C.trachomatis:84 L.infantum:84

O84108              	100.00%		A4I5I1              	100.00%
Bootstrap support for O84108 as seed ortholog is 100%.
Bootstrap support for A4I5I1 as seed ortholog is 100%.

Group of orthologs #102. Best score 84 bits
Score difference with first non-orthologous sequence - C.trachomatis:84 L.infantum:20

O84469              	100.00%		A4I5I4              	100.00%
Bootstrap support for O84469 as seed ortholog is 100%.
Bootstrap support for A4I5I4 as seed ortholog is 76%.

Group of orthologs #103. Best score 83 bits
Score difference with first non-orthologous sequence - C.trachomatis:83 L.infantum:83

O84307              	100.00%		A4I7Q8              	100.00%
                    	       		A4I0M2              	35.66%
Bootstrap support for O84307 as seed ortholog is 100%.
Bootstrap support for A4I7Q8 as seed ortholog is 100%.

Group of orthologs #104. Best score 78 bits
Score difference with first non-orthologous sequence - C.trachomatis:78 L.infantum:78

O84578              	100.00%		A4IBC7              	100.00%
Bootstrap support for O84578 as seed ortholog is 100%.
Bootstrap support for A4IBC7 as seed ortholog is 100%.

Group of orthologs #105. Best score 78 bits
Score difference with first non-orthologous sequence - C.trachomatis:78 L.infantum:78

P0CD81              	100.00%		A4IBR8              	100.00%
Bootstrap support for P0CD81 as seed ortholog is 100%.
Bootstrap support for A4IBR8 as seed ortholog is 100%.

Group of orthologs #106. Best score 74 bits
Score difference with first non-orthologous sequence - C.trachomatis:74 L.infantum:16

O84338              	100.00%		E9AHC5              	100.00%
                    	       		A4I5T9              	18.92%
                    	       		A4IBL6              	17.33%
Bootstrap support for O84338 as seed ortholog is 100%.
Bootstrap support for E9AHC5 as seed ortholog is 72%.
Alternative seed ortholog is A4IAB6 (16 bits away from this cluster)

Group of orthologs #107. Best score 74 bits
Score difference with first non-orthologous sequence - C.trachomatis:74 L.infantum:74

O84686              	100.00%		A4I4C5              	100.00%
Bootstrap support for O84686 as seed ortholog is 100%.
Bootstrap support for A4I4C5 as seed ortholog is 100%.

Group of orthologs #108. Best score 73 bits
Score difference with first non-orthologous sequence - C.trachomatis:73 L.infantum:73

O84703              	100.00%		A4HTS3              	100.00%
Bootstrap support for O84703 as seed ortholog is 100%.
Bootstrap support for A4HTS3 as seed ortholog is 100%.

Group of orthologs #109. Best score 71 bits
Score difference with first non-orthologous sequence - C.trachomatis:71 L.infantum:71

O84189              	100.00%		E9AHB9              	100.00%
Bootstrap support for O84189 as seed ortholog is 100%.
Bootstrap support for E9AHB9 as seed ortholog is 100%.

Group of orthologs #110. Best score 69 bits
Score difference with first non-orthologous sequence - C.trachomatis:69 L.infantum:69

O84492              	100.00%		A4HXM4              	100.00%
Bootstrap support for O84492 as seed ortholog is 100%.
Bootstrap support for A4HXM4 as seed ortholog is 100%.

Group of orthologs #111. Best score 69 bits
Score difference with first non-orthologous sequence - C.trachomatis:69 L.infantum:69

O84139              	100.00%		A4I3T5              	100.00%
Bootstrap support for O84139 as seed ortholog is 100%.
Bootstrap support for A4I3T5 as seed ortholog is 100%.

Group of orthologs #112. Best score 69 bits
Score difference with first non-orthologous sequence - C.trachomatis:69 L.infantum:69

O84782              	100.00%		A4IAE1              	100.00%
Bootstrap support for O84782 as seed ortholog is 100%.
Bootstrap support for A4IAE1 as seed ortholog is 100%.

Group of orthologs #113. Best score 67 bits
Score difference with first non-orthologous sequence - C.trachomatis:67 L.infantum:67

O84353              	100.00%		A4I7S0              	100.00%
Bootstrap support for O84353 as seed ortholog is 100%.
Bootstrap support for A4I7S0 as seed ortholog is 100%.

Group of orthologs #114. Best score 66 bits
Score difference with first non-orthologous sequence - C.trachomatis:66 L.infantum:66

P0CE03              	100.00%		A4I3H3              	100.00%
                    	       		A4I650              	100.00%
Bootstrap support for P0CE03 as seed ortholog is 100%.
Bootstrap support for A4I3H3 as seed ortholog is 100%.
Bootstrap support for A4I650 as seed ortholog is 100%.

Group of orthologs #115. Best score 65 bits
Score difference with first non-orthologous sequence - C.trachomatis:65 L.infantum:65

P0A4C8              	100.00%		A4I7K9              	100.00%
                    	       		E9AGQ8              	100.00%
Bootstrap support for P0A4C8 as seed ortholog is 100%.
Bootstrap support for A4I7K9 as seed ortholog is 100%.
Bootstrap support for E9AGQ8 as seed ortholog is 100%.

Group of orthologs #116. Best score 64 bits
Score difference with first non-orthologous sequence - C.trachomatis:64 L.infantum:64

P0C0Z8              	100.00%		A4I1Z4              	100.00%
Bootstrap support for P0C0Z8 as seed ortholog is 100%.
Bootstrap support for A4I1Z4 as seed ortholog is 100%.

Group of orthologs #117. Best score 63 bits
Score difference with first non-orthologous sequence - C.trachomatis:63 L.infantum:63

O84779              	100.00%		A4HWI6              	100.00%
                    	       		A4HXL7              	11.56%
Bootstrap support for O84779 as seed ortholog is 100%.
Bootstrap support for A4HWI6 as seed ortholog is 100%.

Group of orthologs #118. Best score 61 bits
Score difference with first non-orthologous sequence - C.trachomatis:61 L.infantum:61

O84284              	100.00%		A4IC11              	100.00%
Bootstrap support for O84284 as seed ortholog is 100%.
Bootstrap support for A4IC11 as seed ortholog is 100%.

Group of orthologs #119. Best score 61 bits
Score difference with first non-orthologous sequence - C.trachomatis:61 L.infantum:61

O84689              	100.00%		A4IDK2              	100.00%
Bootstrap support for O84689 as seed ortholog is 100%.
Bootstrap support for A4IDK2 as seed ortholog is 100%.

Group of orthologs #120. Best score 59 bits
Score difference with first non-orthologous sequence - C.trachomatis:59 L.infantum:59

O84258              	100.00%		A4IA41              	100.00%
                    	       		A4HXN9              	19.46%
                    	       		A4HXP0              	10.89%
Bootstrap support for O84258 as seed ortholog is 100%.
Bootstrap support for A4IA41 as seed ortholog is 100%.

Group of orthologs #121. Best score 58 bits
Score difference with first non-orthologous sequence - C.trachomatis:58 L.infantum:58

O84599              	100.00%		A4I2Q1              	100.00%
                    	       		A4HV34              	12.73%
Bootstrap support for O84599 as seed ortholog is 100%.
Bootstrap support for A4I2Q1 as seed ortholog is 100%.

Group of orthologs #122. Best score 57 bits
Score difference with first non-orthologous sequence - C.trachomatis:57 L.infantum:57

P36424              	100.00%		A4I5A2              	100.00%
                    	       		A4I5A3              	11.36%
Bootstrap support for P36424 as seed ortholog is 100%.
Bootstrap support for A4I5A2 as seed ortholog is 100%.

Group of orthologs #123. Best score 57 bits
Score difference with first non-orthologous sequence - C.trachomatis:57 L.infantum:57

P0CD80              	100.00%		A4IC25              	100.00%
                    	       		A4I3C9              	50.70%
Bootstrap support for P0CD80 as seed ortholog is 100%.
Bootstrap support for A4IC25 as seed ortholog is 100%.

Group of orthologs #124. Best score 55 bits
Score difference with first non-orthologous sequence - C.trachomatis:55 L.infantum:55

O84390              	100.00%		A4HVW6              	100.00%
Bootstrap support for O84390 as seed ortholog is 100%.
Bootstrap support for A4HVW6 as seed ortholog is 100%.

Group of orthologs #125. Best score 54 bits
Score difference with first non-orthologous sequence - C.trachomatis:54 L.infantum:54

O84395              	100.00%		A4IDL0              	100.00%
Bootstrap support for O84395 as seed ortholog is 100%.
Bootstrap support for A4IDL0 as seed ortholog is 100%.

Group of orthologs #126. Best score 53 bits
Score difference with first non-orthologous sequence - C.trachomatis:53 L.infantum:53

O84633              	100.00%		A4HWK0              	100.00%
Bootstrap support for O84633 as seed ortholog is 100%.
Bootstrap support for A4HWK0 as seed ortholog is 100%.

Group of orthologs #127. Best score 52 bits
Score difference with first non-orthologous sequence - C.trachomatis:52 L.infantum:52

P0CE04              	100.00%		A4ICP0              	100.00%
                    	       		A4ICP1              	100.00%
Bootstrap support for P0CE04 as seed ortholog is 100%.
Bootstrap support for A4ICP0 as seed ortholog is 100%.
Bootstrap support for A4ICP1 as seed ortholog is 100%.

Group of orthologs #128. Best score 52 bits
Score difference with first non-orthologous sequence - C.trachomatis:52 L.infantum:52

O84496              	100.00%		A4I048              	100.00%
Bootstrap support for O84496 as seed ortholog is 100%.
Bootstrap support for A4I048 as seed ortholog is 100%.

Group of orthologs #129. Best score 52 bits
Score difference with first non-orthologous sequence - C.trachomatis:52 L.infantum:52

P66480              	100.00%		A4HZS1              	100.00%
Bootstrap support for P66480 as seed ortholog is 100%.
Bootstrap support for A4HZS1 as seed ortholog is 100%.

Group of orthologs #130. Best score 50 bits
Score difference with first non-orthologous sequence - C.trachomatis:50 L.infantum:50

P66370              	100.00%		E9AGX4              	100.00%
Bootstrap support for P66370 as seed ortholog is 100%.
Bootstrap support for E9AGX4 as seed ortholog is 100%.

Group of orthologs #131. Best score 49 bits
Score difference with first non-orthologous sequence - C.trachomatis:49 L.infantum:49

O84544              	100.00%		A4HRE8              	100.00%
Bootstrap support for O84544 as seed ortholog is 100%.
Bootstrap support for A4HRE8 as seed ortholog is 100%.

Group of orthologs #132. Best score 48 bits
Score difference with first non-orthologous sequence - C.trachomatis:48 L.infantum:48

O84851              	100.00%		A4HUI5              	100.00%
Bootstrap support for O84851 as seed ortholog is 100%.
Bootstrap support for A4HUI5 as seed ortholog is 100%.

Group of orthologs #133. Best score 48 bits
Score difference with first non-orthologous sequence - C.trachomatis:48 L.infantum:48

O84527              	100.00%		A4HWJ3              	100.00%
Bootstrap support for O84527 as seed ortholog is 100%.
Bootstrap support for A4HWJ3 as seed ortholog is 100%.

Group of orthologs #134. Best score 45 bits
Score difference with first non-orthologous sequence - C.trachomatis:45 L.infantum:45

O84219              	100.00%		E9AHY7              	100.00%
Bootstrap support for O84219 as seed ortholog is 100%.
Bootstrap support for E9AHY7 as seed ortholog is 100%.

Group of orthologs #135. Best score 44 bits
Score difference with first non-orthologous sequence - C.trachomatis:44 L.infantum:44

O84459              	100.00%		A4I816              	100.00%
                    	       		A4I4U1              	5.75%
Bootstrap support for O84459 as seed ortholog is 100%.
Bootstrap support for A4I816 as seed ortholog is 100%.

Group of orthologs #136. Best score 44 bits
Score difference with first non-orthologous sequence - C.trachomatis:44 L.infantum:44

O84191              	100.00%		A4HUB3              	100.00%
Bootstrap support for O84191 as seed ortholog is 100%.
Bootstrap support for A4HUB3 as seed ortholog is 100%.

Group of orthologs #137. Best score 43 bits
Score difference with first non-orthologous sequence - C.trachomatis:43 L.infantum:43

P0CE06              	100.00%		A4HV05              	100.00%
                    	       		A4HV06              	100.00%
Bootstrap support for P0CE06 as seed ortholog is 100%.
Bootstrap support for A4HV05 as seed ortholog is 100%.
Bootstrap support for A4HV06 as seed ortholog is 100%.

Group of orthologs #138. Best score 43 bits
Score difference with first non-orthologous sequence - C.trachomatis:43 L.infantum:43

P0CE05              	100.00%		A4HYZ5              	100.00%
Bootstrap support for P0CE05 as seed ortholog is 100%.
Bootstrap support for A4HYZ5 as seed ortholog is 100%.

Group of orthologs #139. Best score 42 bits
Score difference with first non-orthologous sequence - C.trachomatis:42 L.infantum:42

P0CE02              	100.00%		E9AHH9              	100.00%
Bootstrap support for P0CE02 as seed ortholog is 100%.
Bootstrap support for E9AHH9 as seed ortholog is 100%.

Group of orthologs #140. Best score 41 bits
Score difference with first non-orthologous sequence - C.trachomatis:41 L.infantum:41

P0CD88              	100.00%		A4HS42              	100.00%
Bootstrap support for P0CD88 as seed ortholog is 100%.
Bootstrap support for A4HS42 as seed ortholog is 100%.

Group of orthologs #141. Best score 40 bits
Score difference with first non-orthologous sequence - C.trachomatis:40 L.infantum:40

P0CD83              	100.00%		A4HW37              	100.00%
Bootstrap support for P0CD83 as seed ortholog is 100%.
Bootstrap support for A4HW37 as seed ortholog is 100%.