###################################
177 groups of orthologs
258 in-paralogs from A.gypseum
179 in-paralogs from C.trachomatis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 868 bits
Score difference with first non-orthologous sequence - A.gypseum:585 C.trachomatis:868

E4V4U2              	100.00%		O84022              	100.00%
Bootstrap support for E4V4U2 as seed ortholog is 100%.
Bootstrap support for O84022 as seed ortholog is 100%.

Group of orthologs #2. Best score 768 bits
Score difference with first non-orthologous sequence - A.gypseum:768 C.trachomatis:768

E4USP3              	100.00%		O84250              	100.00%
Bootstrap support for E4USP3 as seed ortholog is 100%.
Bootstrap support for O84250 as seed ortholog is 100%.

Group of orthologs #3. Best score 683 bits
Score difference with first non-orthologous sequence - A.gypseum:249 C.trachomatis:683

E4V3H8              	100.00%		O84348              	100.00%
Bootstrap support for E4V3H8 as seed ortholog is 99%.
Bootstrap support for O84348 as seed ortholog is 100%.

Group of orthologs #4. Best score 671 bits
Score difference with first non-orthologous sequence - A.gypseum:132 C.trachomatis:614

E4V572              	100.00%		P17821              	100.00%
Bootstrap support for E4V572 as seed ortholog is 99%.
Bootstrap support for P17821 as seed ortholog is 100%.

Group of orthologs #5. Best score 663 bits
Score difference with first non-orthologous sequence - A.gypseum:663 C.trachomatis:93

E4UTI6              	100.00%		O84115              	100.00%
Bootstrap support for E4UTI6 as seed ortholog is 100%.
Bootstrap support for O84115 as seed ortholog is 96%.

Group of orthologs #6. Best score 546 bits
Score difference with first non-orthologous sequence - A.gypseum:465 C.trachomatis:362

E4UTY4              	100.00%		P0C0Z7              	100.00%
Bootstrap support for E4UTY4 as seed ortholog is 100%.
Bootstrap support for P0C0Z7 as seed ortholog is 100%.

Group of orthologs #7. Best score 540 bits
Score difference with first non-orthologous sequence - A.gypseum:540 C.trachomatis:540

E4V158              	100.00%		O84057              	100.00%
Bootstrap support for E4V158 as seed ortholog is 100%.
Bootstrap support for O84057 as seed ortholog is 100%.

Group of orthologs #8. Best score 515 bits
Score difference with first non-orthologous sequence - A.gypseum:384 C.trachomatis:515

E4UNA8              	100.00%		O84067              	100.00%
Bootstrap support for E4UNA8 as seed ortholog is 100%.
Bootstrap support for O84067 as seed ortholog is 100%.

Group of orthologs #9. Best score 498 bits
Score difference with first non-orthologous sequence - A.gypseum:365 C.trachomatis:498

E4UY24              	100.00%		O84304              	100.00%
Bootstrap support for E4UY24 as seed ortholog is 100%.
Bootstrap support for O84304 as seed ortholog is 100%.

Group of orthologs #10. Best score 494 bits
Score difference with first non-orthologous sequence - A.gypseum:494 C.trachomatis:494

E4UXZ9              	100.00%		O84754              	100.00%
Bootstrap support for E4UXZ9 as seed ortholog is 100%.
Bootstrap support for O84754 as seed ortholog is 100%.

Group of orthologs #11. Best score 486 bits
Score difference with first non-orthologous sequence - A.gypseum:118 C.trachomatis:486

E4UP97              	100.00%		O84444              	100.00%
Bootstrap support for E4UP97 as seed ortholog is 97%.
Bootstrap support for O84444 as seed ortholog is 100%.

Group of orthologs #12. Best score 483 bits
Score difference with first non-orthologous sequence - A.gypseum:409 C.trachomatis:483

E4UZF6              	100.00%		O84211              	100.00%
Bootstrap support for E4UZF6 as seed ortholog is 100%.
Bootstrap support for O84211 as seed ortholog is 100%.

Group of orthologs #13. Best score 475 bits
Score difference with first non-orthologous sequence - A.gypseum:475 C.trachomatis:475

E5R3Z2              	100.00%		O84834              	100.00%
Bootstrap support for E5R3Z2 as seed ortholog is 100%.
Bootstrap support for O84834 as seed ortholog is 100%.

Group of orthologs #14. Best score 469 bits
Score difference with first non-orthologous sequence - A.gypseum:260 C.trachomatis:469

E4V6Z0              	100.00%		O84066              	100.00%
Bootstrap support for E4V6Z0 as seed ortholog is 100%.
Bootstrap support for O84066 as seed ortholog is 100%.

Group of orthologs #15. Best score 465 bits
Score difference with first non-orthologous sequence - A.gypseum:465 C.trachomatis:465

E5R399              	100.00%		O84755              	100.00%
Bootstrap support for E5R399 as seed ortholog is 100%.
Bootstrap support for O84755 as seed ortholog is 100%.

Group of orthologs #16. Best score 455 bits
Score difference with first non-orthologous sequence - A.gypseum:455 C.trachomatis:455

E5R0M8              	100.00%		O84863              	100.00%
Bootstrap support for E5R0M8 as seed ortholog is 100%.
Bootstrap support for O84863 as seed ortholog is 100%.

Group of orthologs #17. Best score 452 bits
Score difference with first non-orthologous sequence - A.gypseum:293 C.trachomatis:452

E4UN51              	100.00%		P0CD71              	100.00%
Bootstrap support for E4UN51 as seed ortholog is 100%.
Bootstrap support for P0CD71 as seed ortholog is 100%.

Group of orthologs #18. Best score 418 bits
Score difference with first non-orthologous sequence - A.gypseum:1 C.trachomatis:418

E4V167              	100.00%		O84848              	100.00%
Bootstrap support for E4V167 as seed ortholog is 62%.
Alternative seed ortholog is E5R042 (1 bits away from this cluster)
Bootstrap support for O84848 as seed ortholog is 100%.

Group of orthologs #19. Best score 418 bits
Score difference with first non-orthologous sequence - A.gypseum:109 C.trachomatis:418

E5R038              	100.00%		O84585              	100.00%
Bootstrap support for E5R038 as seed ortholog is 98%.
Bootstrap support for O84585 as seed ortholog is 100%.

Group of orthologs #20. Best score 401 bits
Score difference with first non-orthologous sequence - A.gypseum:401 C.trachomatis:401

E4V0E6              	100.00%		Q59321              	100.00%
Bootstrap support for E4V0E6 as seed ortholog is 100%.
Bootstrap support for Q59321 as seed ortholog is 100%.

Group of orthologs #21. Best score 369 bits
Score difference with first non-orthologous sequence - A.gypseum:369 C.trachomatis:369

E4UQX4              	100.00%		O84172              	100.00%
Bootstrap support for E4UQX4 as seed ortholog is 100%.
Bootstrap support for O84172 as seed ortholog is 100%.

Group of orthologs #22. Best score 364 bits
Score difference with first non-orthologous sequence - A.gypseum:364 C.trachomatis:364

E4US77              	100.00%		O84310              	100.00%
Bootstrap support for E4US77 as seed ortholog is 100%.
Bootstrap support for O84310 as seed ortholog is 100%.

Group of orthologs #23. Best score 361 bits
Score difference with first non-orthologous sequence - A.gypseum:200 C.trachomatis:361

E5R0Z9              	100.00%		O84098              	100.00%
Bootstrap support for E5R0Z9 as seed ortholog is 99%.
Bootstrap support for O84098 as seed ortholog is 100%.

Group of orthologs #24. Best score 354 bits
Score difference with first non-orthologous sequence - A.gypseum:354 C.trachomatis:354

E4UUU8              	100.00%		P0CE13              	100.00%
Bootstrap support for E4UUU8 as seed ortholog is 100%.
Bootstrap support for P0CE13 as seed ortholog is 100%.

Group of orthologs #25. Best score 346 bits
Score difference with first non-orthologous sequence - A.gypseum:346 C.trachomatis:346

E4UUI3              	100.00%		O84126              	100.00%
Bootstrap support for E4UUI3 as seed ortholog is 100%.
Bootstrap support for O84126 as seed ortholog is 100%.

Group of orthologs #26. Best score 345 bits
Score difference with first non-orthologous sequence - A.gypseum:345 C.trachomatis:345

E4UW97              	100.00%		O84591              	100.00%
Bootstrap support for E4UW97 as seed ortholog is 100%.
Bootstrap support for O84591 as seed ortholog is 100%.

Group of orthologs #27. Best score 341 bits
Score difference with first non-orthologous sequence - A.gypseum:341 C.trachomatis:341

E4UZD9              	100.00%		P0CD73              	100.00%
Bootstrap support for E4UZD9 as seed ortholog is 100%.
Bootstrap support for P0CD73 as seed ortholog is 100%.

Group of orthologs #28. Best score 336 bits
Score difference with first non-orthologous sequence - A.gypseum:249 C.trachomatis:336

E4UVX5              	100.00%		O84831              	100.00%
Bootstrap support for E4UVX5 as seed ortholog is 100%.
Bootstrap support for O84831 as seed ortholog is 100%.

Group of orthologs #29. Best score 333 bits
Score difference with first non-orthologous sequence - A.gypseum:333 C.trachomatis:333

E5R255              	100.00%		O84101              	100.00%
Bootstrap support for E5R255 as seed ortholog is 100%.
Bootstrap support for O84101 as seed ortholog is 100%.

Group of orthologs #30. Best score 311 bits
Score difference with first non-orthologous sequence - A.gypseum:123 C.trachomatis:311

E4V5Y3              	100.00%		O84248              	100.00%
Bootstrap support for E4V5Y3 as seed ortholog is 99%.
Bootstrap support for O84248 as seed ortholog is 100%.

Group of orthologs #31. Best score 308 bits
Score difference with first non-orthologous sequence - A.gypseum:244 C.trachomatis:308

E5R0W8              	100.00%		O84786              	100.00%
Bootstrap support for E5R0W8 as seed ortholog is 100%.
Bootstrap support for O84786 as seed ortholog is 100%.

Group of orthologs #32. Best score 307 bits
Score difference with first non-orthologous sequence - A.gypseum:307 C.trachomatis:307

E4UTJ5              	100.00%		O84829              	100.00%
Bootstrap support for E4UTJ5 as seed ortholog is 100%.
Bootstrap support for O84829 as seed ortholog is 100%.

Group of orthologs #33. Best score 305 bits
Score difference with first non-orthologous sequence - A.gypseum:305 C.trachomatis:305

E4UNG0              	100.00%		P0CD78              	100.00%
Bootstrap support for E4UNG0 as seed ortholog is 100%.
Bootstrap support for P0CD78 as seed ortholog is 100%.

Group of orthologs #34. Best score 300 bits
Score difference with first non-orthologous sequence - A.gypseum:157 C.trachomatis:300

E5R1R1              	100.00%		O84035              	100.00%
E5QZ46              	41.02%		
Bootstrap support for E5R1R1 as seed ortholog is 99%.
Bootstrap support for O84035 as seed ortholog is 100%.

Group of orthologs #35. Best score 296 bits
Score difference with first non-orthologous sequence - A.gypseum:145 C.trachomatis:296

E4UXK2              	100.00%		O84561              	100.00%
Bootstrap support for E4UXK2 as seed ortholog is 99%.
Bootstrap support for O84561 as seed ortholog is 100%.

Group of orthologs #36. Best score 292 bits
Score difference with first non-orthologous sequence - A.gypseum:230 C.trachomatis:292

E4UR03              	100.00%		O84775              	100.00%
Bootstrap support for E4UR03 as seed ortholog is 100%.
Bootstrap support for O84775 as seed ortholog is 100%.

Group of orthologs #37. Best score 285 bits
Score difference with first non-orthologous sequence - A.gypseum:285 C.trachomatis:285

E4V383              	100.00%		P0CE21              	100.00%
Bootstrap support for E4V383 as seed ortholog is 100%.
Bootstrap support for P0CE21 as seed ortholog is 100%.

Group of orthologs #38. Best score 282 bits
Score difference with first non-orthologous sequence - A.gypseum:282 C.trachomatis:282

E4UTZ2              	100.00%		O84711              	100.00%
Bootstrap support for E4UTZ2 as seed ortholog is 100%.
Bootstrap support for O84711 as seed ortholog is 100%.

Group of orthologs #39. Best score 281 bits
Score difference with first non-orthologous sequence - A.gypseum:281 C.trachomatis:281

E5QZF9              	100.00%		O84188              	100.00%
Bootstrap support for E5QZF9 as seed ortholog is 100%.
Bootstrap support for O84188 as seed ortholog is 100%.

Group of orthologs #40. Best score 279 bits
Score difference with first non-orthologous sequence - A.gypseum:279 C.trachomatis:279

E5R1G4              	100.00%		O84316              	100.00%
E5R344              	14.03%		
E5R1U8              	9.60%		
Bootstrap support for E5R1G4 as seed ortholog is 100%.
Bootstrap support for O84316 as seed ortholog is 100%.

Group of orthologs #41. Best score 278 bits
Score difference with first non-orthologous sequence - A.gypseum:222 C.trachomatis:278

E4V490              	100.00%		O84451              	100.00%
Bootstrap support for E4V490 as seed ortholog is 100%.
Bootstrap support for O84451 as seed ortholog is 100%.

Group of orthologs #42. Best score 275 bits
Score difference with first non-orthologous sequence - A.gypseum:48 C.trachomatis:275

E4UVM5              	100.00%		O84797              	100.00%
E4UYE0              	100.00%		
Bootstrap support for E4UVM5 as seed ortholog is 80%.
Bootstrap support for E4UYE0 as seed ortholog is 96%.
Bootstrap support for O84797 as seed ortholog is 100%.

Group of orthologs #43. Best score 266 bits
Score difference with first non-orthologous sequence - A.gypseum:266 C.trachomatis:266

E4US96              	100.00%		O84787              	100.00%
E5R3U7              	42.98%		
Bootstrap support for E4US96 as seed ortholog is 100%.
Bootstrap support for O84787 as seed ortholog is 100%.

Group of orthologs #44. Best score 265 bits
Score difference with first non-orthologous sequence - A.gypseum:265 C.trachomatis:265

E4USB1              	100.00%		O84698              	100.00%
E4V537              	19.57%		
Bootstrap support for E4USB1 as seed ortholog is 100%.
Bootstrap support for O84698 as seed ortholog is 100%.

Group of orthologs #45. Best score 265 bits
Score difference with first non-orthologous sequence - A.gypseum:265 C.trachomatis:265

E4UTX8              	100.00%		P0CE09              	100.00%
E4V307              	18.29%		
Bootstrap support for E4UTX8 as seed ortholog is 100%.
Bootstrap support for P0CE09 as seed ortholog is 100%.

Group of orthologs #46. Best score 265 bits
Score difference with first non-orthologous sequence - A.gypseum:265 C.trachomatis:265

E4V2V6              	100.00%		O84828              	100.00%
Bootstrap support for E4V2V6 as seed ortholog is 100%.
Bootstrap support for O84828 as seed ortholog is 100%.

Group of orthologs #47. Best score 262 bits
Score difference with first non-orthologous sequence - A.gypseum:262 C.trachomatis:262

E4UUM8              	100.00%		O84315              	100.00%
Bootstrap support for E4UUM8 as seed ortholog is 100%.
Bootstrap support for O84315 as seed ortholog is 100%.

Group of orthologs #48. Best score 260 bits
Score difference with first non-orthologous sequence - A.gypseum:123 C.trachomatis:100

E4UN07              	100.00%		O84249              	100.00%
Bootstrap support for E4UN07 as seed ortholog is 99%.
Bootstrap support for O84249 as seed ortholog is 98%.

Group of orthologs #49. Best score 257 bits
Score difference with first non-orthologous sequence - A.gypseum:125 C.trachomatis:257

E4V5X5              	100.00%		O84006              	100.00%
Bootstrap support for E4V5X5 as seed ortholog is 99%.
Bootstrap support for O84006 as seed ortholog is 100%.

Group of orthologs #50. Best score 255 bits
Score difference with first non-orthologous sequence - A.gypseum:56 C.trachomatis:255

E5QYL6              	100.00%		O84352              	100.00%
E4UT19              	11.85%		
Bootstrap support for E5QYL6 as seed ortholog is 90%.
Bootstrap support for O84352 as seed ortholog is 100%.

Group of orthologs #51. Best score 255 bits
Score difference with first non-orthologous sequence - A.gypseum:255 C.trachomatis:255

E4UQX2              	100.00%		O84309              	100.00%
Bootstrap support for E4UQX2 as seed ortholog is 100%.
Bootstrap support for O84309 as seed ortholog is 100%.

Group of orthologs #52. Best score 252 bits
Score difference with first non-orthologous sequence - A.gypseum:252 C.trachomatis:252

E5R229              	100.00%		O84439              	100.00%
E5R0F8              	43.61%		
Bootstrap support for E5R229 as seed ortholog is 100%.
Bootstrap support for O84439 as seed ortholog is 100%.

Group of orthologs #53. Best score 251 bits
Score difference with first non-orthologous sequence - A.gypseum:251 C.trachomatis:251

E4V504              	100.00%		P0CD72              	100.00%
Bootstrap support for E4V504 as seed ortholog is 100%.
Bootstrap support for P0CD72 as seed ortholog is 100%.

Group of orthologs #54. Best score 243 bits
Score difference with first non-orthologous sequence - A.gypseum:243 C.trachomatis:243

E4UT78              	100.00%		P36431              	100.00%
Bootstrap support for E4UT78 as seed ortholog is 100%.
Bootstrap support for P36431 as seed ortholog is 100%.

Group of orthologs #55. Best score 243 bits
Score difference with first non-orthologous sequence - A.gypseum:243 C.trachomatis:243

E5R2M0              	100.00%		O84373              	100.00%
Bootstrap support for E5R2M0 as seed ortholog is 100%.
Bootstrap support for O84373 as seed ortholog is 100%.

Group of orthologs #56. Best score 232 bits
Score difference with first non-orthologous sequence - A.gypseum:232 C.trachomatis:232

E4V0T3              	100.00%		O84094              	100.00%
Bootstrap support for E4V0T3 as seed ortholog is 100%.
Bootstrap support for O84094 as seed ortholog is 100%.

Group of orthologs #57. Best score 231 bits
Score difference with first non-orthologous sequence - A.gypseum:231 C.trachomatis:231

E4V1J0              	100.00%		O84642              	100.00%
E4V552              	24.71%		
E4UPX8              	14.08%		
Bootstrap support for E4V1J0 as seed ortholog is 100%.
Bootstrap support for O84642 as seed ortholog is 100%.

Group of orthologs #58. Best score 229 bits
Score difference with first non-orthologous sequence - A.gypseum:145 C.trachomatis:229

E4UYL7              	100.00%		O84596              	100.00%
Bootstrap support for E4UYL7 as seed ortholog is 98%.
Bootstrap support for O84596 as seed ortholog is 100%.

Group of orthologs #59. Best score 228 bits
Score difference with first non-orthologous sequence - A.gypseum:228 C.trachomatis:228

E4UWN0              	100.00%		O84562              	100.00%
Bootstrap support for E4UWN0 as seed ortholog is 100%.
Bootstrap support for O84562 as seed ortholog is 100%.

Group of orthologs #60. Best score 221 bits
Score difference with first non-orthologous sequence - A.gypseum:221 C.trachomatis:87

E4UXY2              	100.00%		O84026              	100.00%
Bootstrap support for E4UXY2 as seed ortholog is 100%.
Bootstrap support for O84026 as seed ortholog is 98%.

Group of orthologs #61. Best score 219 bits
Score difference with first non-orthologous sequence - A.gypseum:219 C.trachomatis:219

E4UUU0              	100.00%		O84812              	100.00%
Bootstrap support for E4UUU0 as seed ortholog is 100%.
Bootstrap support for O84812 as seed ortholog is 100%.

Group of orthologs #62. Best score 215 bits
Score difference with first non-orthologous sequence - A.gypseum:170 C.trachomatis:215

E4UXK4              	100.00%		O84297              	100.00%
Bootstrap support for E4UXK4 as seed ortholog is 99%.
Bootstrap support for O84297 as seed ortholog is 100%.

Group of orthologs #63. Best score 212 bits
Score difference with first non-orthologous sequence - A.gypseum:212 C.trachomatis:212

E4V176              	100.00%		O84296              	100.00%
Bootstrap support for E4V176 as seed ortholog is 100%.
Bootstrap support for O84296 as seed ortholog is 100%.

Group of orthologs #64. Best score 209 bits
Score difference with first non-orthologous sequence - A.gypseum:16 C.trachomatis:209

E4V3H9              	100.00%		O84345              	100.00%
Bootstrap support for E4V3H9 as seed ortholog is 73%.
Alternative seed ortholog is E4V026 (16 bits away from this cluster)
Bootstrap support for O84345 as seed ortholog is 100%.

Group of orthologs #65. Best score 206 bits
Score difference with first non-orthologous sequence - A.gypseum:159 C.trachomatis:206

E4V642              	100.00%		O84196              	100.00%
Bootstrap support for E4V642 as seed ortholog is 99%.
Bootstrap support for O84196 as seed ortholog is 100%.

Group of orthologs #66. Best score 204 bits
Score difference with first non-orthologous sequence - A.gypseum:204 C.trachomatis:204

E5QZ30              	100.00%		O84638              	100.00%
E4UXV4              	35.06%		
E4V0C6              	29.68%		
Bootstrap support for E5QZ30 as seed ortholog is 100%.
Bootstrap support for O84638 as seed ortholog is 100%.

Group of orthologs #67. Best score 203 bits
Score difference with first non-orthologous sequence - A.gypseum:203 C.trachomatis:203

E4UVL6              	100.00%		O84460              	100.00%
E4URH5              	42.40%		
Bootstrap support for E4UVL6 as seed ortholog is 100%.
Bootstrap support for O84460 as seed ortholog is 100%.

Group of orthologs #68. Best score 203 bits
Score difference with first non-orthologous sequence - A.gypseum:203 C.trachomatis:203

E4UP86              	100.00%		O84065              	100.00%
Bootstrap support for E4UP86 as seed ortholog is 100%.
Bootstrap support for O84065 as seed ortholog is 100%.

Group of orthologs #69. Best score 202 bits
Score difference with first non-orthologous sequence - A.gypseum:202 C.trachomatis:202

E5R1J2              	100.00%		O84423              	100.00%
Bootstrap support for E5R1J2 as seed ortholog is 100%.
Bootstrap support for O84423 as seed ortholog is 100%.

Group of orthologs #70. Best score 193 bits
Score difference with first non-orthologous sequence - A.gypseum:15 C.trachomatis:193

E4UV21              	100.00%		O84734              	100.00%
Bootstrap support for E4UV21 as seed ortholog is 62%.
Alternative seed ortholog is E5R2V1 (15 bits away from this cluster)
Bootstrap support for O84734 as seed ortholog is 100%.

Group of orthologs #71. Best score 190 bits
Score difference with first non-orthologous sequence - A.gypseum:190 C.trachomatis:190

E4US05              	100.00%		O84028              	100.00%
Bootstrap support for E4US05 as seed ortholog is 100%.
Bootstrap support for O84028 as seed ortholog is 100%.

Group of orthologs #72. Best score 189 bits
Score difference with first non-orthologous sequence - A.gypseum:189 C.trachomatis:189

E4UNK0              	100.00%		O84007              	100.00%
Bootstrap support for E4UNK0 as seed ortholog is 100%.
Bootstrap support for O84007 as seed ortholog is 100%.

Group of orthologs #73. Best score 189 bits
Score difference with first non-orthologous sequence - A.gypseum:189 C.trachomatis:189

E4V370              	100.00%		O84859              	100.00%
Bootstrap support for E4V370 as seed ortholog is 100%.
Bootstrap support for O84859 as seed ortholog is 100%.

Group of orthologs #74. Best score 188 bits
Score difference with first non-orthologous sequence - A.gypseum:188 C.trachomatis:188

E4UYT4              	100.00%		O84266              	100.00%
Bootstrap support for E4UYT4 as seed ortholog is 100%.
Bootstrap support for O84266 as seed ortholog is 100%.

Group of orthologs #75. Best score 187 bits
Score difference with first non-orthologous sequence - A.gypseum:187 C.trachomatis:187

E4UWS3              	100.00%		O84823              	100.00%
Bootstrap support for E4UWS3 as seed ortholog is 100%.
Bootstrap support for O84823 as seed ortholog is 100%.

Group of orthologs #76. Best score 186 bits
Score difference with first non-orthologous sequence - A.gypseum:186 C.trachomatis:186

E4UT74              	100.00%		O84360              	100.00%
Bootstrap support for E4UT74 as seed ortholog is 100%.
Bootstrap support for O84360 as seed ortholog is 100%.

Group of orthologs #77. Best score 181 bits
Score difference with first non-orthologous sequence - A.gypseum:63 C.trachomatis:181

E4UZA5              	100.00%		O84247              	100.00%
Bootstrap support for E4UZA5 as seed ortholog is 96%.
Bootstrap support for O84247 as seed ortholog is 100%.

Group of orthologs #78. Best score 176 bits
Score difference with first non-orthologous sequence - A.gypseum:36 C.trachomatis:176

E4UTY8              	100.00%		O84676              	100.00%
                    	       		O84722              	10.78%
Bootstrap support for E4UTY8 as seed ortholog is 82%.
Bootstrap support for O84676 as seed ortholog is 100%.

Group of orthologs #79. Best score 176 bits
Score difference with first non-orthologous sequence - A.gypseum:176 C.trachomatis:176

E4V6Z8              	100.00%		O84630              	100.00%
Bootstrap support for E4V6Z8 as seed ortholog is 100%.
Bootstrap support for O84630 as seed ortholog is 100%.

Group of orthologs #80. Best score 175 bits
Score difference with first non-orthologous sequence - A.gypseum:82 C.trachomatis:175

E4V3V3              	100.00%		O84332              	100.00%
Bootstrap support for E4V3V3 as seed ortholog is 99%.
Bootstrap support for O84332 as seed ortholog is 100%.

Group of orthologs #81. Best score 174 bits
Score difference with first non-orthologous sequence - A.gypseum:174 C.trachomatis:40

E4V0R9              	100.00%		O84712              	100.00%
Bootstrap support for E4V0R9 as seed ortholog is 100%.
Bootstrap support for O84712 as seed ortholog is 94%.

Group of orthologs #82. Best score 171 bits
Score difference with first non-orthologous sequence - A.gypseum:171 C.trachomatis:171

E5QYP2              	100.00%		O84613              	100.00%
Bootstrap support for E5QYP2 as seed ortholog is 100%.
Bootstrap support for O84613 as seed ortholog is 100%.

Group of orthologs #83. Best score 169 bits
Score difference with first non-orthologous sequence - A.gypseum:36 C.trachomatis:169

E4V0U4              	100.00%		O84732              	100.00%
E5R2K4              	5.23%		
Bootstrap support for E4V0U4 as seed ortholog is 77%.
Bootstrap support for O84732 as seed ortholog is 100%.

Group of orthologs #84. Best score 156 bits
Score difference with first non-orthologous sequence - A.gypseum:27 C.trachomatis:156

E4V221              	100.00%		P38004              	100.00%
Bootstrap support for E4V221 as seed ortholog is 81%.
Bootstrap support for P38004 as seed ortholog is 100%.

Group of orthologs #85. Best score 155 bits
Score difference with first non-orthologous sequence - A.gypseum:155 C.trachomatis:155

E4UR62              	100.00%		O84368              	100.00%
Bootstrap support for E4UR62 as seed ortholog is 100%.
Bootstrap support for O84368 as seed ortholog is 100%.

Group of orthologs #86. Best score 150 bits
Score difference with first non-orthologous sequence - A.gypseum:150 C.trachomatis:150

E4V514              	100.00%		O84619              	100.00%
Bootstrap support for E4V514 as seed ortholog is 100%.
Bootstrap support for O84619 as seed ortholog is 100%.

Group of orthologs #87. Best score 149 bits
Score difference with first non-orthologous sequence - A.gypseum:55 C.trachomatis:149

E4UP74              	100.00%		O84546              	100.00%
Bootstrap support for E4UP74 as seed ortholog is 91%.
Bootstrap support for O84546 as seed ortholog is 100%.

Group of orthologs #88. Best score 148 bits
Score difference with first non-orthologous sequence - A.gypseum:148 C.trachomatis:148

E4UZU9              	100.00%		O84720              	100.00%
Bootstrap support for E4UZU9 as seed ortholog is 100%.
Bootstrap support for O84720 as seed ortholog is 100%.

Group of orthologs #89. Best score 143 bits
Score difference with first non-orthologous sequence - A.gypseum:143 C.trachomatis:143

E4V3M9              	100.00%		O84835              	100.00%
Bootstrap support for E4V3M9 as seed ortholog is 100%.
Bootstrap support for O84835 as seed ortholog is 100%.

Group of orthologs #90. Best score 139 bits
Score difference with first non-orthologous sequence - A.gypseum:89 C.trachomatis:139

E4URB2              	100.00%		P66370              	100.00%
Bootstrap support for E4URB2 as seed ortholog is 99%.
Bootstrap support for P66370 as seed ortholog is 100%.

Group of orthologs #91. Best score 135 bits
Score difference with first non-orthologous sequence - A.gypseum:135 C.trachomatis:135

E4UZG5              	100.00%		O84704              	100.00%
Bootstrap support for E4UZG5 as seed ortholog is 100%.
Bootstrap support for O84704 as seed ortholog is 100%.

Group of orthologs #92. Best score 134 bits
Score difference with first non-orthologous sequence - A.gypseum:134 C.trachomatis:10

E5R1C5              	100.00%		O84260              	100.00%
Bootstrap support for E5R1C5 as seed ortholog is 100%.
Bootstrap support for O84260 as seed ortholog is 41%.
Alternative seed ortholog is O84693 (10 bits away from this cluster)

Group of orthologs #93. Best score 133 bits
Score difference with first non-orthologous sequence - A.gypseum:133 C.trachomatis:133

E4UVG3              	100.00%		O84123              	100.00%
Bootstrap support for E4UVG3 as seed ortholog is 100%.
Bootstrap support for O84123 as seed ortholog is 100%.

Group of orthologs #94. Best score 133 bits
Score difference with first non-orthologous sequence - A.gypseum:133 C.trachomatis:133

E4V3M4              	100.00%		O84096              	100.00%
Bootstrap support for E4V3M4 as seed ortholog is 100%.
Bootstrap support for O84096 as seed ortholog is 100%.

Group of orthologs #95. Best score 131 bits
Score difference with first non-orthologous sequence - A.gypseum:131 C.trachomatis:131

E4V025              	100.00%		O84752              	100.00%
Bootstrap support for E4V025 as seed ortholog is 100%.
Bootstrap support for O84752 as seed ortholog is 100%.

Group of orthologs #96. Best score 127 bits
Score difference with first non-orthologous sequence - A.gypseum:127 C.trachomatis:127

E5QZU9              	100.00%		O84456              	100.00%
E4V197              	13.51%		
Bootstrap support for E5QZU9 as seed ortholog is 100%.
Bootstrap support for O84456 as seed ortholog is 100%.

Group of orthologs #97. Best score 125 bits
Score difference with first non-orthologous sequence - A.gypseum:125 C.trachomatis:125

E4UYZ1              	100.00%		O84589              	100.00%
Bootstrap support for E4UYZ1 as seed ortholog is 100%.
Bootstrap support for O84589 as seed ortholog is 100%.

Group of orthologs #98. Best score 124 bits
Score difference with first non-orthologous sequence - A.gypseum:124 C.trachomatis:124

E5QZ20              	100.00%		O84033              	100.00%
E4UTG4              	20.07%		
Bootstrap support for E5QZ20 as seed ortholog is 100%.
Bootstrap support for O84033 as seed ortholog is 100%.

Group of orthologs #99. Best score 123 bits
Score difference with first non-orthologous sequence - A.gypseum:37 C.trachomatis:123

E5R0V6              	100.00%		O84782              	100.00%
E5R2A7              	20.31%		
Bootstrap support for E5R0V6 as seed ortholog is 82%.
Bootstrap support for O84782 as seed ortholog is 100%.

Group of orthologs #100. Best score 121 bits
Score difference with first non-orthologous sequence - A.gypseum:121 C.trachomatis:121

E4UQM3              	100.00%		O84843              	100.00%
Bootstrap support for E4UQM3 as seed ortholog is 100%.
Bootstrap support for O84843 as seed ortholog is 100%.

Group of orthologs #101. Best score 119 bits
Score difference with first non-orthologous sequence - A.gypseum:119 C.trachomatis:119

E4URV4              	100.00%		O84508              	100.00%
Bootstrap support for E4URV4 as seed ortholog is 100%.
Bootstrap support for O84508 as seed ortholog is 100%.

Group of orthologs #102. Best score 119 bits
Score difference with first non-orthologous sequence - A.gypseum:119 C.trachomatis:119

E5QYM0              	100.00%		O84533              	100.00%
Bootstrap support for E5QYM0 as seed ortholog is 100%.
Bootstrap support for O84533 as seed ortholog is 100%.

Group of orthologs #103. Best score 115 bits
Score difference with first non-orthologous sequence - A.gypseum:39 C.trachomatis:115

E4UZ34              	100.00%		O84130              	100.00%
Bootstrap support for E4UZ34 as seed ortholog is 88%.
Bootstrap support for O84130 as seed ortholog is 100%.

Group of orthologs #104. Best score 107 bits
Score difference with first non-orthologous sequence - A.gypseum:107 C.trachomatis:107

E4UYV3              	100.00%		O84771              	100.00%
Bootstrap support for E4UYV3 as seed ortholog is 100%.
Bootstrap support for O84771 as seed ortholog is 100%.

Group of orthologs #105. Best score 106 bits
Score difference with first non-orthologous sequence - A.gypseum:106 C.trachomatis:106

E4URX7              	100.00%		O84320              	100.00%
Bootstrap support for E4URX7 as seed ortholog is 100%.
Bootstrap support for O84320 as seed ortholog is 100%.

Group of orthologs #106. Best score 106 bits
Score difference with first non-orthologous sequence - A.gypseum:106 C.trachomatis:106

E5R145              	100.00%		O84864              	100.00%
Bootstrap support for E5R145 as seed ortholog is 100%.
Bootstrap support for O84864 as seed ortholog is 100%.

Group of orthologs #107. Best score 105 bits
Score difference with first non-orthologous sequence - A.gypseum:105 C.trachomatis:105

E4UXE1              	100.00%		O84442              	100.00%
E4V4U1              	7.02%		
Bootstrap support for E4UXE1 as seed ortholog is 100%.
Bootstrap support for O84442 as seed ortholog is 100%.

Group of orthologs #108. Best score 105 bits
Score difference with first non-orthologous sequence - A.gypseum:2 C.trachomatis:105

E5R009              	100.00%		O84478              	100.00%
Bootstrap support for E5R009 as seed ortholog is 96%.
Bootstrap support for O84478 as seed ortholog is 100%.

Group of orthologs #109. Best score 104 bits
Score difference with first non-orthologous sequence - A.gypseum:30 C.trachomatis:104

E4V4L6              	100.00%		O84578              	100.00%
Bootstrap support for E4V4L6 as seed ortholog is 75%.
Bootstrap support for O84578 as seed ortholog is 100%.

Group of orthologs #110. Best score 103 bits
Score difference with first non-orthologous sequence - A.gypseum:103 C.trachomatis:103

E4V2X9              	100.00%		O84492              	100.00%
Bootstrap support for E4V2X9 as seed ortholog is 100%.
Bootstrap support for O84492 as seed ortholog is 100%.

Group of orthologs #111. Best score 99 bits
Score difference with first non-orthologous sequence - A.gypseum:99 C.trachomatis:99

E5R102              	100.00%		O84687              	100.00%
Bootstrap support for E5R102 as seed ortholog is 100%.
Bootstrap support for O84687 as seed ortholog is 100%.

Group of orthologs #112. Best score 97 bits
Score difference with first non-orthologous sequence - A.gypseum:97 C.trachomatis:97

E4UP40              	100.00%		O84358              	100.00%
Bootstrap support for E4UP40 as seed ortholog is 100%.
Bootstrap support for O84358 as seed ortholog is 100%.

Group of orthologs #113. Best score 97 bits
Score difference with first non-orthologous sequence - A.gypseum:97 C.trachomatis:97

E5QYR6              	100.00%		O84463              	100.00%
Bootstrap support for E5QYR6 as seed ortholog is 100%.
Bootstrap support for O84463 as seed ortholog is 100%.

Group of orthologs #114. Best score 96 bits
Score difference with first non-orthologous sequence - A.gypseum:33 C.trachomatis:96

E4UVP4              	100.00%		O84781              	100.00%
E4USV7              	23.73%		
E4UT34              	20.29%		
E4UVA3              	10.05%		
E5R404              	7.85%		
E5R1T4              	5.93%		
Bootstrap support for E4UVP4 as seed ortholog is 79%.
Bootstrap support for O84781 as seed ortholog is 100%.

Group of orthologs #115. Best score 95 bits
Score difference with first non-orthologous sequence - A.gypseum:95 C.trachomatis:95

E4UWS2              	100.00%		O84737              	100.00%
Bootstrap support for E4UWS2 as seed ortholog is 100%.
Bootstrap support for O84737 as seed ortholog is 100%.

Group of orthologs #116. Best score 94 bits
Score difference with first non-orthologous sequence - A.gypseum:94 C.trachomatis:94

E4UXV2              	100.00%		O84301              	100.00%
E4USC2              	69.54%		
E4UYP2              	35.28%		
Bootstrap support for E4UXV2 as seed ortholog is 100%.
Bootstrap support for O84301 as seed ortholog is 100%.

Group of orthologs #117. Best score 92 bits
Score difference with first non-orthologous sequence - A.gypseum:92 C.trachomatis:92

E5QZY1              	100.00%		O84410              	100.00%
Bootstrap support for E5QZY1 as seed ortholog is 100%.
Bootstrap support for O84410 as seed ortholog is 100%.

Group of orthologs #118. Best score 91 bits
Score difference with first non-orthologous sequence - A.gypseum:91 C.trachomatis:91

E4UQF6              	100.00%		O84212              	100.00%
E4UQI4              	12.28%		
E4V3L1              	8.10%		
Bootstrap support for E4UQF6 as seed ortholog is 100%.
Bootstrap support for O84212 as seed ortholog is 100%.

Group of orthologs #119. Best score 91 bits
Score difference with first non-orthologous sequence - A.gypseum:37 C.trachomatis:91

E4UQ26              	100.00%		P0CD81              	100.00%
Bootstrap support for E4UQ26 as seed ortholog is 95%.
Bootstrap support for P0CD81 as seed ortholog is 100%.

Group of orthologs #120. Best score 89 bits
Score difference with first non-orthologous sequence - A.gypseum:89 C.trachomatis:89

E4V734              	100.00%		O84337              	100.00%
E4UR11              	37.02%		
E5R2V4              	33.51%		
E4USB8              	31.31%		
E4US67              	27.31%		
E4UUW3              	26.95%		
E5QYV6              	25.56%		
E4US98              	21.40%		
E4USM5              	20.67%		
E4V5H6              	15.00%		
E4UQF7              	6.03%		
Bootstrap support for E4V734 as seed ortholog is 100%.
Bootstrap support for O84337 as seed ortholog is 100%.

Group of orthologs #121. Best score 87 bits
Score difference with first non-orthologous sequence - A.gypseum:87 C.trachomatis:87

E4UNI3              	100.00%		O84595              	100.00%
Bootstrap support for E4UNI3 as seed ortholog is 100%.
Bootstrap support for O84595 as seed ortholog is 100%.

Group of orthologs #122. Best score 86 bits
Score difference with first non-orthologous sequence - A.gypseum:86 C.trachomatis:86

E4V5L3              	100.00%		O84608              	100.00%
Bootstrap support for E4V5L3 as seed ortholog is 100%.
Bootstrap support for O84608 as seed ortholog is 100%.

Group of orthologs #123. Best score 86 bits
Score difference with first non-orthologous sequence - A.gypseum:41 C.trachomatis:86

E5R0N8              	100.00%		O84435              	100.00%
Bootstrap support for E5R0N8 as seed ortholog is 90%.
Bootstrap support for O84435 as seed ortholog is 100%.

Group of orthologs #124. Best score 85 bits
Score difference with first non-orthologous sequence - A.gypseum:85 C.trachomatis:85

E4V607              	100.00%		O84851              	100.00%
Bootstrap support for E4V607 as seed ortholog is 100%.
Bootstrap support for O84851 as seed ortholog is 100%.

Group of orthologs #125. Best score 84 bits
Score difference with first non-orthologous sequence - A.gypseum:84 C.trachomatis:84

E4V4D7              	100.00%		P0CE01              	100.00%
Bootstrap support for E4V4D7 as seed ortholog is 100%.
Bootstrap support for P0CE01 as seed ortholog is 100%.

Group of orthologs #126. Best score 83 bits
Score difference with first non-orthologous sequence - A.gypseum:83 C.trachomatis:83

E4V4B0              	100.00%		O84649              	100.00%
E5R045              	18.71%		
Bootstrap support for E4V4B0 as seed ortholog is 100%.
Bootstrap support for O84649 as seed ortholog is 100%.

Group of orthologs #127. Best score 83 bits
Score difference with first non-orthologous sequence - A.gypseum:83 C.trachomatis:83

E4US42              	100.00%		O84391              	100.00%
Bootstrap support for E4US42 as seed ortholog is 100%.
Bootstrap support for O84391 as seed ortholog is 100%.

Group of orthologs #128. Best score 83 bits
Score difference with first non-orthologous sequence - A.gypseum:83 C.trachomatis:83

E4V6N2              	100.00%		P0CD84              	100.00%
Bootstrap support for E4V6N2 as seed ortholog is 100%.
Bootstrap support for P0CD84 as seed ortholog is 100%.

Group of orthologs #129. Best score 83 bits
Score difference with first non-orthologous sequence - A.gypseum:83 C.trachomatis:83

E5R341              	100.00%		O84599              	100.00%
Bootstrap support for E5R341 as seed ortholog is 100%.
Bootstrap support for O84599 as seed ortholog is 100%.

Group of orthologs #130. Best score 82 bits
Score difference with first non-orthologous sequence - A.gypseum:82 C.trachomatis:82

E4UTB8              	100.00%		O84530              	100.00%
Bootstrap support for E4UTB8 as seed ortholog is 100%.
Bootstrap support for O84530 as seed ortholog is 100%.

Group of orthologs #131. Best score 82 bits
Score difference with first non-orthologous sequence - A.gypseum:82 C.trachomatis:82

E4V069              	100.00%		O84294              	100.00%
Bootstrap support for E4V069 as seed ortholog is 100%.
Bootstrap support for O84294 as seed ortholog is 100%.

Group of orthologs #132. Best score 82 bits
Score difference with first non-orthologous sequence - A.gypseum:82 C.trachomatis:82

E4V3W1              	100.00%		O84658              	100.00%
Bootstrap support for E4V3W1 as seed ortholog is 100%.
Bootstrap support for O84658 as seed ortholog is 100%.

Group of orthologs #133. Best score 81 bits
Score difference with first non-orthologous sequence - A.gypseum:36 C.trachomatis:81

E5R1N2              	100.00%		O84127              	100.00%
Bootstrap support for E5R1N2 as seed ortholog is 93%.
Bootstrap support for O84127 as seed ortholog is 100%.

Group of orthologs #134. Best score 79 bits
Score difference with first non-orthologous sequence - A.gypseum:79 C.trachomatis:79

E4UZB4              	100.00%		O84200              	100.00%
Bootstrap support for E4UZB4 as seed ortholog is 100%.
Bootstrap support for O84200 as seed ortholog is 100%.

Group of orthologs #135. Best score 79 bits
Score difference with first non-orthologous sequence - A.gypseum:79 C.trachomatis:79

E4V1Z5              	100.00%		O84353              	100.00%
Bootstrap support for E4V1Z5 as seed ortholog is 100%.
Bootstrap support for O84353 as seed ortholog is 100%.

Group of orthologs #136. Best score 77 bits
Score difference with first non-orthologous sequence - A.gypseum:77 C.trachomatis:77

E4UNH7              	100.00%		O84719              	100.00%
Bootstrap support for E4UNH7 as seed ortholog is 100%.
Bootstrap support for O84719 as seed ortholog is 100%.

Group of orthologs #137. Best score 77 bits
Score difference with first non-orthologous sequence - A.gypseum:77 C.trachomatis:77

E4UV07              	100.00%		O84367              	100.00%
Bootstrap support for E4UV07 as seed ortholog is 100%.
Bootstrap support for O84367 as seed ortholog is 100%.

Group of orthologs #138. Best score 77 bits
Score difference with first non-orthologous sequence - A.gypseum:77 C.trachomatis:77

E4UZA3              	100.00%		O84318              	100.00%
Bootstrap support for E4UZA3 as seed ortholog is 100%.
Bootstrap support for O84318 as seed ortholog is 100%.

Group of orthologs #139. Best score 76 bits
Score difference with first non-orthologous sequence - A.gypseum:76 C.trachomatis:11

E4UXV6              	100.00%		O84154              	100.00%
                    	       		O84660              	6.35%
Bootstrap support for E4UXV6 as seed ortholog is 100%.
Bootstrap support for O84154 as seed ortholog is 66%.
Alternative seed ortholog is O84695 (11 bits away from this cluster)

Group of orthologs #140. Best score 76 bits
Score difference with first non-orthologous sequence - A.gypseum:76 C.trachomatis:76

E4UYN3              	100.00%		O84321              	100.00%
Bootstrap support for E4UYN3 as seed ortholog is 100%.
Bootstrap support for O84321 as seed ortholog is 100%.

Group of orthologs #141. Best score 74 bits
Score difference with first non-orthologous sequence - A.gypseum:74 C.trachomatis:74

E4V0S0              	100.00%		O84338              	100.00%
E4UUW0              	18.01%		
E4UYU7              	15.67%		
Bootstrap support for E4V0S0 as seed ortholog is 100%.
Bootstrap support for O84338 as seed ortholog is 100%.

Group of orthologs #142. Best score 72 bits
Score difference with first non-orthologous sequence - A.gypseum:72 C.trachomatis:72

E4V4D8              	100.00%		O84779              	100.00%
Bootstrap support for E4V4D8 as seed ortholog is 100%.
Bootstrap support for O84779 as seed ortholog is 100%.

Group of orthologs #143. Best score 71 bits
Score difference with first non-orthologous sequence - A.gypseum:71 C.trachomatis:71

E4V042              	100.00%		O84189              	100.00%
Bootstrap support for E4V042 as seed ortholog is 100%.
Bootstrap support for O84189 as seed ortholog is 100%.

Group of orthologs #144. Best score 70 bits
Score difference with first non-orthologous sequence - A.gypseum:70 C.trachomatis:70

E4UN41              	100.00%		O84284              	100.00%
Bootstrap support for E4UN41 as seed ortholog is 100%.
Bootstrap support for O84284 as seed ortholog is 100%.

Group of orthologs #145. Best score 69 bits
Score difference with first non-orthologous sequence - A.gypseum:69 C.trachomatis:69

E4V2Q9              	100.00%		O84544              	100.00%
E4URN6              	18.24%		
Bootstrap support for E4V2Q9 as seed ortholog is 100%.
Bootstrap support for O84544 as seed ortholog is 100%.

Group of orthologs #146. Best score 69 bits
Score difference with first non-orthologous sequence - A.gypseum:69 C.trachomatis:69

E4UYI0              	100.00%		O84081              	100.00%
Bootstrap support for E4UYI0 as seed ortholog is 100%.
Bootstrap support for O84081 as seed ortholog is 100%.

Group of orthologs #147. Best score 68 bits
Score difference with first non-orthologous sequence - A.gypseum:68 C.trachomatis:68

E4V3D1              	100.00%		P0A4C8              	100.00%
Bootstrap support for E4V3D1 as seed ortholog is 100%.
Bootstrap support for P0A4C8 as seed ortholog is 100%.

Group of orthologs #148. Best score 67 bits
Score difference with first non-orthologous sequence - A.gypseum:6 C.trachomatis:67

E4UW57              	100.00%		P0CE04              	100.00%
Bootstrap support for E4UW57 as seed ortholog is 63%.
Alternative seed ortholog is E4USS8 (6 bits away from this cluster)
Bootstrap support for P0CE04 as seed ortholog is 100%.

Group of orthologs #149. Best score 67 bits
Score difference with first non-orthologous sequence - A.gypseum:12 C.trachomatis:67

E5QZS6              	100.00%		O84822              	100.00%
Bootstrap support for E5QZS6 as seed ortholog is 59%.
Alternative seed ortholog is E5QZC0 (12 bits away from this cluster)
Bootstrap support for O84822 as seed ortholog is 100%.

Group of orthologs #150. Best score 66 bits
Score difference with first non-orthologous sequence - A.gypseum:66 C.trachomatis:66

E4V709              	100.00%		O84750              	100.00%
Bootstrap support for E4V709 as seed ortholog is 100%.
Bootstrap support for O84750 as seed ortholog is 100%.

Group of orthologs #151. Best score 66 bits
Score difference with first non-orthologous sequence - A.gypseum:66 C.trachomatis:66

E5QZ94              	100.00%		O84390              	100.00%
Bootstrap support for E5QZ94 as seed ortholog is 100%.
Bootstrap support for O84390 as seed ortholog is 100%.

Group of orthologs #152. Best score 66 bits
Score difference with first non-orthologous sequence - A.gypseum:66 C.trachomatis:66

E5R081              	100.00%		O84792              	100.00%
Bootstrap support for E5R081 as seed ortholog is 100%.
Bootstrap support for O84792 as seed ortholog is 100%.

Group of orthologs #153. Best score 65 bits
Score difference with first non-orthologous sequence - A.gypseum:65 C.trachomatis:65

E5R036              	100.00%		O84833              	100.00%
Bootstrap support for E5R036 as seed ortholog is 100%.
Bootstrap support for O84833 as seed ortholog is 100%.

Group of orthologs #154. Best score 64 bits
Score difference with first non-orthologous sequence - A.gypseum:64 C.trachomatis:64

E4UXC5              	100.00%		O84150              	100.00%
E5R3P0              	18.35%		
E4URX4              	16.05%		
Bootstrap support for E4UXC5 as seed ortholog is 100%.
Bootstrap support for O84150 as seed ortholog is 100%.

Group of orthologs #155. Best score 64 bits
Score difference with first non-orthologous sequence - A.gypseum:64 C.trachomatis:64

E5R1N5              	100.00%		P0CE03              	100.00%
Bootstrap support for E5R1N5 as seed ortholog is 100%.
Bootstrap support for P0CE03 as seed ortholog is 100%.

Group of orthologs #156. Best score 61 bits
Score difference with first non-orthologous sequence - A.gypseum:61 C.trachomatis:61

E4UQM2              	100.00%		P36424              	100.00%
Bootstrap support for E4UQM2 as seed ortholog is 100%.
Bootstrap support for P36424 as seed ortholog is 100%.

Group of orthologs #157. Best score 61 bits
Score difference with first non-orthologous sequence - A.gypseum:61 C.trachomatis:61

E5R1X1              	100.00%		P0C0Z8              	100.00%
Bootstrap support for E5R1X1 as seed ortholog is 100%.
Bootstrap support for P0C0Z8 as seed ortholog is 100%.

Group of orthologs #158. Best score 60 bits
Score difference with first non-orthologous sequence - A.gypseum:5 C.trachomatis:60

E4V6Z6              	100.00%		O84218              	100.00%
E4USH8              	32.04%		
E4V6U6              	31.37%		
E4UUQ3              	29.76%		
E5R412              	27.39%		
E4V668              	27.01%		
E4UWW1              	24.64%		
E4V2C7              	23.22%		
E4UZJ7              	22.46%		
E4V5R7              	21.99%		
E4UWC1              	21.42%		
E4UXE8              	17.25%		
E4UX07              	13.55%		
E4US31              	10.81%		
Bootstrap support for E4V6Z6 as seed ortholog is 45%.
Alternative seed ortholog is E4UZB0 (5 bits away from this cluster)
Bootstrap support for O84218 as seed ortholog is 100%.

Group of orthologs #159. Best score 60 bits
Score difference with first non-orthologous sequence - A.gypseum:60 C.trachomatis:60

E4UV10              	100.00%		O84611              	100.00%
Bootstrap support for E4UV10 as seed ortholog is 100%.
Bootstrap support for O84611 as seed ortholog is 100%.

Group of orthologs #160. Best score 59 bits
Score difference with first non-orthologous sequence - A.gypseum:59 C.trachomatis:59

E5QYF1              	100.00%		O84527              	100.00%
Bootstrap support for E5QYF1 as seed ortholog is 100%.
Bootstrap support for O84527 as seed ortholog is 100%.

Group of orthologs #161. Best score 59 bits
Score difference with first non-orthologous sequence - A.gypseum:59 C.trachomatis:59

E5R2B4              	100.00%		O84215              	100.00%
Bootstrap support for E5R2B4 as seed ortholog is 100%.
Bootstrap support for O84215 as seed ortholog is 100%.

Group of orthologs #162. Best score 57 bits
Score difference with first non-orthologous sequence - A.gypseum:57 C.trachomatis:57

E4UN50              	100.00%		O84840              	100.00%
Bootstrap support for E4UN50 as seed ortholog is 100%.
Bootstrap support for O84840 as seed ortholog is 100%.

Group of orthologs #163. Best score 56 bits
Score difference with first non-orthologous sequence - A.gypseum:56 C.trachomatis:56

E5R1F5              	100.00%		O84366              	100.00%
E5R3J4              	21.86%		
E5R3F3              	20.61%		
Bootstrap support for E5R1F5 as seed ortholog is 100%.
Bootstrap support for O84366 as seed ortholog is 100%.

Group of orthologs #164. Best score 54 bits
Score difference with first non-orthologous sequence - A.gypseum:8 C.trachomatis:54

E4V1F0              	100.00%		O84395              	100.00%
Bootstrap support for E4V1F0 as seed ortholog is 59%.
Alternative seed ortholog is E4UQ62 (8 bits away from this cluster)
Bootstrap support for O84395 as seed ortholog is 100%.

Group of orthologs #165. Best score 53 bits
Score difference with first non-orthologous sequence - A.gypseum:53 C.trachomatis:53

E4UZV1              	100.00%		P0CD80              	100.00%
E4UNF6              	38.70%		
Bootstrap support for E4UZV1 as seed ortholog is 100%.
Bootstrap support for P0CD80 as seed ortholog is 100%.

Group of orthologs #166. Best score 53 bits
Score difference with first non-orthologous sequence - A.gypseum:53 C.trachomatis:53

E4UR68              	100.00%		P0CD83              	100.00%
Bootstrap support for E4UR68 as seed ortholog is 100%.
Bootstrap support for P0CD83 as seed ortholog is 100%.

Group of orthologs #167. Best score 53 bits
Score difference with first non-orthologous sequence - A.gypseum:53 C.trachomatis:53

E4UXK7              	100.00%		P0CE02              	100.00%
Bootstrap support for E4UXK7 as seed ortholog is 100%.
Bootstrap support for P0CE02 as seed ortholog is 100%.

Group of orthologs #168. Best score 52 bits
Score difference with first non-orthologous sequence - A.gypseum:52 C.trachomatis:52

E4UMZ2              	100.00%		O84381              	100.00%
E4UYX5              	46.13%		
Bootstrap support for E4UMZ2 as seed ortholog is 100%.
Bootstrap support for O84381 as seed ortholog is 100%.

Group of orthologs #169. Best score 52 bits
Score difference with first non-orthologous sequence - A.gypseum:4 C.trachomatis:52

E4UMR3              	100.00%		P66480              	100.00%
Bootstrap support for E4UMR3 as seed ortholog is 56%.
Alternative seed ortholog is E4UY92 (4 bits away from this cluster)
Bootstrap support for P66480 as seed ortholog is 100%.

Group of orthologs #170. Best score 52 bits
Score difference with first non-orthologous sequence - A.gypseum:52 C.trachomatis:52

E4UY30              	100.00%		O84220              	100.00%
Bootstrap support for E4UY30 as seed ortholog is 100%.
Bootstrap support for O84220 as seed ortholog is 100%.

Group of orthologs #171. Best score 51 bits
Score difference with first non-orthologous sequence - A.gypseum:51 C.trachomatis:51

E4UUC2              	100.00%		O84548              	100.00%
E4V5G4              	24.08%		
E4UX82              	22.20%		
E4UWY6              	20.81%		
E4UQT3              	18.93%		
E5R1F3              	17.54%		
E4UT00              	12.29%		
E4V675              	11.79%		
E4V3G1              	10.60%		
E4UNG7              	10.51%		
E5R2S3              	9.91%		
E4UVS6              	9.71%		
E5R3J3              	9.71%		
E4URM3              	9.71%		
E4UUU5              	9.42%		
E4UTN6              	9.32%		
E4V262              	8.92%		
E4URV1              	7.93%		
E5R227              	7.63%		
E4V6V7              	7.53%		
E4UX47              	6.84%		
Bootstrap support for E4UUC2 as seed ortholog is 100%.
Bootstrap support for O84548 as seed ortholog is 100%.

Group of orthologs #172. Best score 51 bits
Score difference with first non-orthologous sequence - A.gypseum:51 C.trachomatis:51

E5R1N3              	100.00%		O84128              	100.00%
Bootstrap support for E5R1N3 as seed ortholog is 100%.
Bootstrap support for O84128 as seed ortholog is 100%.

Group of orthologs #173. Best score 51 bits
Score difference with first non-orthologous sequence - A.gypseum:51 C.trachomatis:51

E5R264              	100.00%		O84547              	100.00%
Bootstrap support for E5R264 as seed ortholog is 100%.
Bootstrap support for O84547 as seed ortholog is 100%.

Group of orthologs #174. Best score 50 bits
Score difference with first non-orthologous sequence - A.gypseum:50 C.trachomatis:50

E4UUA6              	100.00%		O84806              	100.00%
Bootstrap support for E4UUA6 as seed ortholog is 100%.
Bootstrap support for O84806 as seed ortholog is 100%.

Group of orthologs #175. Best score 49 bits
Score difference with first non-orthologous sequence - A.gypseum:49 C.trachomatis:49

E5R110              	100.00%		O84239              	100.00%
Bootstrap support for E5R110 as seed ortholog is 100%.
Bootstrap support for O84239 as seed ortholog is 100%.

Group of orthologs #176. Best score 46 bits
Score difference with first non-orthologous sequence - A.gypseum:46 C.trachomatis:46

E4USW7              	100.00%		O84029              	100.00%
Bootstrap support for E4USW7 as seed ortholog is 100%.
Bootstrap support for O84029 as seed ortholog is 100%.

Group of orthologs #177. Best score 42 bits
Score difference with first non-orthologous sequence - A.gypseum:42 C.trachomatis:42

E4V1S9              	100.00%		P0CE06              	100.00%
Bootstrap support for E4V1S9 as seed ortholog is 100%.
Bootstrap support for P0CE06 as seed ortholog is 100%.