###################################
662 groups of orthologs
681 in-paralogs from C.hominis
714 in-paralogs from P.jiroveci
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 2928 bits
Score difference with first non-orthologous sequence - C.hominis:2928 P.jiroveci:2928

Q5CIY6              	100.00%		L0PCQ0              	100.00%
Bootstrap support for Q5CIY6 as seed ortholog is 100%.
Bootstrap support for L0PCQ0 as seed ortholog is 100%.

Group of orthologs #2. Best score 1677 bits
Score difference with first non-orthologous sequence - C.hominis:1677 P.jiroveci:1677

Q5CH45              	100.00%		L0PB90              	100.00%
Bootstrap support for Q5CH45 as seed ortholog is 100%.
Bootstrap support for L0PB90 as seed ortholog is 100%.

Group of orthologs #3. Best score 1223 bits
Score difference with first non-orthologous sequence - C.hominis:1223 P.jiroveci:1223

Q5CM48              	100.00%		L0PGI2              	100.00%
Bootstrap support for Q5CM48 as seed ortholog is 100%.
Bootstrap support for L0PGI2 as seed ortholog is 100%.

Group of orthologs #4. Best score 1074 bits
Score difference with first non-orthologous sequence - C.hominis:1074 P.jiroveci:759

Q5CK97              	100.00%		L0PB43              	100.00%
Bootstrap support for Q5CK97 as seed ortholog is 100%.
Bootstrap support for L0PB43 as seed ortholog is 100%.

Group of orthologs #5. Best score 993 bits
Score difference with first non-orthologous sequence - C.hominis:993 P.jiroveci:993

Q5CL79              	100.00%		L0PG53              	100.00%
Bootstrap support for Q5CL79 as seed ortholog is 100%.
Bootstrap support for L0PG53 as seed ortholog is 100%.

Group of orthologs #6. Best score 961 bits
Score difference with first non-orthologous sequence - C.hominis:961 P.jiroveci:961

Q5CLV4              	100.00%		L0PBF5              	100.00%
Bootstrap support for Q5CLV4 as seed ortholog is 100%.
Bootstrap support for L0PBF5 as seed ortholog is 100%.

Group of orthologs #7. Best score 886 bits
Score difference with first non-orthologous sequence - C.hominis:356 P.jiroveci:886

Q5CFW9              	100.00%		L0PAW9              	100.00%
                    	       		L0PBZ0              	71.14%
Bootstrap support for Q5CFW9 as seed ortholog is 100%.
Bootstrap support for L0PAW9 as seed ortholog is 100%.

Group of orthologs #8. Best score 886 bits
Score difference with first non-orthologous sequence - C.hominis:396 P.jiroveci:150

Q5CIT8              	100.00%		L0PEK6              	100.00%
Bootstrap support for Q5CIT8 as seed ortholog is 100%.
Bootstrap support for L0PEK6 as seed ortholog is 99%.

Group of orthologs #9. Best score 876 bits
Score difference with first non-orthologous sequence - C.hominis:876 P.jiroveci:876

Q5CJ92              	100.00%		L0PD06              	100.00%
                    	       		L0PHB1              	6.35%
Bootstrap support for Q5CJ92 as seed ortholog is 100%.
Bootstrap support for L0PD06 as seed ortholog is 100%.

Group of orthologs #10. Best score 794 bits
Score difference with first non-orthologous sequence - C.hominis:794 P.jiroveci:794

Q5CNC3              	100.00%		L0PAQ3              	100.00%
Bootstrap support for Q5CNC3 as seed ortholog is 100%.
Bootstrap support for L0PAQ3 as seed ortholog is 100%.

Group of orthologs #11. Best score 789 bits
Score difference with first non-orthologous sequence - C.hominis:400 P.jiroveci:220

Q5CJD7              	100.00%		L0PFS2              	100.00%
Bootstrap support for Q5CJD7 as seed ortholog is 100%.
Bootstrap support for L0PFS2 as seed ortholog is 100%.

Group of orthologs #12. Best score 770 bits
Score difference with first non-orthologous sequence - C.hominis:361 P.jiroveci:770

Q5CM90              	100.00%		L0PEW0              	100.00%
Bootstrap support for Q5CM90 as seed ortholog is 100%.
Bootstrap support for L0PEW0 as seed ortholog is 100%.

Group of orthologs #13. Best score 759 bits
Score difference with first non-orthologous sequence - C.hominis:759 P.jiroveci:672

Q5CH42              	100.00%		L0PDF1              	100.00%
Bootstrap support for Q5CH42 as seed ortholog is 100%.
Bootstrap support for L0PDF1 as seed ortholog is 100%.

Group of orthologs #14. Best score 757 bits
Score difference with first non-orthologous sequence - C.hominis:461 P.jiroveci:619

Q5CGR0              	100.00%		L0PAG9              	100.00%
Bootstrap support for Q5CGR0 as seed ortholog is 100%.
Bootstrap support for L0PAG9 as seed ortholog is 100%.

Group of orthologs #15. Best score 757 bits
Score difference with first non-orthologous sequence - C.hominis:432 P.jiroveci:250

Q5CNG4              	100.00%		L0PAJ7              	100.00%
Bootstrap support for Q5CNG4 as seed ortholog is 100%.
Bootstrap support for L0PAJ7 as seed ortholog is 99%.

Group of orthologs #16. Best score 748 bits
Score difference with first non-orthologous sequence - C.hominis:304 P.jiroveci:223

Q5CKG3              	100.00%		L0PFC8              	100.00%
Bootstrap support for Q5CKG3 as seed ortholog is 100%.
Bootstrap support for L0PFC8 as seed ortholog is 100%.

Group of orthologs #17. Best score 734 bits
Score difference with first non-orthologous sequence - C.hominis:734 P.jiroveci:157

Q5CJN3              	100.00%		L0PDB3              	100.00%
Bootstrap support for Q5CJN3 as seed ortholog is 100%.
Bootstrap support for L0PDB3 as seed ortholog is 98%.

Group of orthologs #18. Best score 708 bits
Score difference with first non-orthologous sequence - C.hominis:313 P.jiroveci:397

Q5CNZ6              	100.00%		L0PCW9              	100.00%
Bootstrap support for Q5CNZ6 as seed ortholog is 100%.
Bootstrap support for L0PCW9 as seed ortholog is 100%.

Group of orthologs #19. Best score 706 bits
Score difference with first non-orthologous sequence - C.hominis:706 P.jiroveci:706

Q5CGE3              	100.00%		L0PDQ4              	100.00%
Bootstrap support for Q5CGE3 as seed ortholog is 100%.
Bootstrap support for L0PDQ4 as seed ortholog is 100%.

Group of orthologs #20. Best score 706 bits
Score difference with first non-orthologous sequence - C.hominis:616 P.jiroveci:299

Q5CNH7              	100.00%		L0P9P7              	100.00%
Bootstrap support for Q5CNH7 as seed ortholog is 100%.
Bootstrap support for L0P9P7 as seed ortholog is 99%.

Group of orthologs #21. Best score 700 bits
Score difference with first non-orthologous sequence - C.hominis:700 P.jiroveci:700

Q5CHP5              	100.00%		L0PCG8              	100.00%
Bootstrap support for Q5CHP5 as seed ortholog is 100%.
Bootstrap support for L0PCG8 as seed ortholog is 100%.

Group of orthologs #22. Best score 681 bits
Score difference with first non-orthologous sequence - C.hominis:3 P.jiroveci:681

Q5CIW4              	100.00%		L0PG21              	100.00%
Bootstrap support for Q5CIW4 as seed ortholog is 72%.
Alternative seed ortholog is Q5CJJ1 (3 bits away from this cluster)
Bootstrap support for L0PG21 as seed ortholog is 100%.

Group of orthologs #23. Best score 679 bits
Score difference with first non-orthologous sequence - C.hominis:405 P.jiroveci:209

Q5CHC5              	100.00%		L0PB13              	100.00%
Bootstrap support for Q5CHC5 as seed ortholog is 100%.
Bootstrap support for L0PB13 as seed ortholog is 99%.

Group of orthologs #24. Best score 676 bits
Score difference with first non-orthologous sequence - C.hominis:676 P.jiroveci:676

Q5CMZ7              	100.00%		L0PCK0              	100.00%
                    	       		L0P7U1              	99.24%
Bootstrap support for Q5CMZ7 as seed ortholog is 100%.
Bootstrap support for L0PCK0 as seed ortholog is 100%.

Group of orthologs #25. Best score 673 bits
Score difference with first non-orthologous sequence - C.hominis:673 P.jiroveci:379

Q5CHT5              	100.00%		L0PBA5              	100.00%
Bootstrap support for Q5CHT5 as seed ortholog is 100%.
Bootstrap support for L0PBA5 as seed ortholog is 100%.

Group of orthologs #26. Best score 666 bits
Score difference with first non-orthologous sequence - C.hominis:666 P.jiroveci:666

Q5CHA0              	100.00%		L0PBY6              	100.00%
Bootstrap support for Q5CHA0 as seed ortholog is 100%.
Bootstrap support for L0PBY6 as seed ortholog is 100%.

Group of orthologs #27. Best score 663 bits
Score difference with first non-orthologous sequence - C.hominis:452 P.jiroveci:390

Q5CGG0              	100.00%		L0PGL8              	100.00%
Bootstrap support for Q5CGG0 as seed ortholog is 100%.
Bootstrap support for L0PGL8 as seed ortholog is 100%.

Group of orthologs #28. Best score 663 bits
Score difference with first non-orthologous sequence - C.hominis:314 P.jiroveci:663

Q5CL81              	100.00%		L0PBR4              	100.00%
Bootstrap support for Q5CL81 as seed ortholog is 100%.
Bootstrap support for L0PBR4 as seed ortholog is 100%.

Group of orthologs #29. Best score 638 bits
Score difference with first non-orthologous sequence - C.hominis:638 P.jiroveci:304

Q5CIR5              	100.00%		L0P9U5              	100.00%
Bootstrap support for Q5CIR5 as seed ortholog is 100%.
Bootstrap support for L0P9U5 as seed ortholog is 100%.

Group of orthologs #30. Best score 635 bits
Score difference with first non-orthologous sequence - C.hominis:635 P.jiroveci:635

Q5CHW8              	100.00%		L0PD55              	100.00%
Bootstrap support for Q5CHW8 as seed ortholog is 100%.
Bootstrap support for L0PD55 as seed ortholog is 100%.

Group of orthologs #31. Best score 621 bits
Score difference with first non-orthologous sequence - C.hominis:331 P.jiroveci:394

Q5CNS5              	100.00%		L0PBL6              	100.00%
Bootstrap support for Q5CNS5 as seed ortholog is 100%.
Bootstrap support for L0PBL6 as seed ortholog is 100%.

Group of orthologs #32. Best score 618 bits
Score difference with first non-orthologous sequence - C.hominis:359 P.jiroveci:334

Q5CH78              	100.00%		L0PA91              	100.00%
Bootstrap support for Q5CH78 as seed ortholog is 100%.
Bootstrap support for L0PA91 as seed ortholog is 100%.

Group of orthologs #33. Best score 613 bits
Score difference with first non-orthologous sequence - C.hominis:613 P.jiroveci:22

Q5CMC8              	100.00%		L0P8C8              	100.00%
Bootstrap support for Q5CMC8 as seed ortholog is 100%.
Bootstrap support for L0P8C8 as seed ortholog is 66%.
Alternative seed ortholog is L0PBE4 (22 bits away from this cluster)

Group of orthologs #34. Best score 607 bits
Score difference with first non-orthologous sequence - C.hominis:607 P.jiroveci:607

Q5CLC4              	100.00%		L0PEP7              	100.00%
Bootstrap support for Q5CLC4 as seed ortholog is 100%.
Bootstrap support for L0PEP7 as seed ortholog is 100%.

Group of orthologs #35. Best score 602 bits
Score difference with first non-orthologous sequence - C.hominis:602 P.jiroveci:602

Q5CER1              	100.00%		L0P7X5              	100.00%
Bootstrap support for Q5CER1 as seed ortholog is 100%.
Bootstrap support for L0P7X5 as seed ortholog is 100%.

Group of orthologs #36. Best score 602 bits
Score difference with first non-orthologous sequence - C.hominis:421 P.jiroveci:602

Q5CEP2              	100.00%		L0P976              	100.00%
Bootstrap support for Q5CEP2 as seed ortholog is 100%.
Bootstrap support for L0P976 as seed ortholog is 100%.

Group of orthologs #37. Best score 592 bits
Score difference with first non-orthologous sequence - C.hominis:420 P.jiroveci:592

Q5CEF6              	100.00%		L0PG45              	100.00%
Bootstrap support for Q5CEF6 as seed ortholog is 100%.
Bootstrap support for L0PG45 as seed ortholog is 100%.

Group of orthologs #38. Best score 591 bits
Score difference with first non-orthologous sequence - C.hominis:591 P.jiroveci:365

Q5CEK3              	100.00%		L0PBQ6              	100.00%
Bootstrap support for Q5CEK3 as seed ortholog is 100%.
Bootstrap support for L0PBQ6 as seed ortholog is 100%.

Group of orthologs #39. Best score 591 bits
Score difference with first non-orthologous sequence - C.hominis:448 P.jiroveci:591

Q5CLL3              	100.00%		L0PER6              	100.00%
Bootstrap support for Q5CLL3 as seed ortholog is 100%.
Bootstrap support for L0PER6 as seed ortholog is 100%.

Group of orthologs #40. Best score 581 bits
Score difference with first non-orthologous sequence - C.hominis:581 P.jiroveci:581

Q5CGL2              	100.00%		L0PCC4              	100.00%
Bootstrap support for Q5CGL2 as seed ortholog is 100%.
Bootstrap support for L0PCC4 as seed ortholog is 100%.

Group of orthologs #41. Best score 577 bits
Score difference with first non-orthologous sequence - C.hominis:577 P.jiroveci:577

Q5CNK7              	100.00%		L0PA62              	100.00%
Bootstrap support for Q5CNK7 as seed ortholog is 100%.
Bootstrap support for L0PA62 as seed ortholog is 100%.

Group of orthologs #42. Best score 569 bits
Score difference with first non-orthologous sequence - C.hominis:310 P.jiroveci:321

Q5CML5              	100.00%		L0P853              	100.00%
                    	       		L0P8M8              	57.93%
Bootstrap support for Q5CML5 as seed ortholog is 100%.
Bootstrap support for L0P853 as seed ortholog is 100%.

Group of orthologs #43. Best score 569 bits
Score difference with first non-orthologous sequence - C.hominis:362 P.jiroveci:349

Q5CHC9              	100.00%		L0P8E7              	100.00%
Bootstrap support for Q5CHC9 as seed ortholog is 100%.
Bootstrap support for L0P8E7 as seed ortholog is 100%.

Group of orthologs #44. Best score 569 bits
Score difference with first non-orthologous sequence - C.hominis:401 P.jiroveci:569

Q5CI36              	100.00%		L0P945              	100.00%
Bootstrap support for Q5CI36 as seed ortholog is 100%.
Bootstrap support for L0P945 as seed ortholog is 100%.

Group of orthologs #45. Best score 569 bits
Score difference with first non-orthologous sequence - C.hominis:396 P.jiroveci:569

Q5CN42              	100.00%		L0PGA5              	100.00%
Bootstrap support for Q5CN42 as seed ortholog is 100%.
Bootstrap support for L0PGA5 as seed ortholog is 100%.

Group of orthologs #46. Best score 564 bits
Score difference with first non-orthologous sequence - C.hominis:564 P.jiroveci:564

Q5CKU0              	100.00%		L0PFJ0              	100.00%
Bootstrap support for Q5CKU0 as seed ortholog is 100%.
Bootstrap support for L0PFJ0 as seed ortholog is 100%.

Group of orthologs #47. Best score 557 bits
Score difference with first non-orthologous sequence - C.hominis:557 P.jiroveci:557

Q5CGL8              	100.00%		L0P8W6              	100.00%
Bootstrap support for Q5CGL8 as seed ortholog is 100%.
Bootstrap support for L0P8W6 as seed ortholog is 100%.

Group of orthologs #48. Best score 548 bits
Score difference with first non-orthologous sequence - C.hominis:333 P.jiroveci:164

Q5CKW8              	100.00%		L0PBH4              	100.00%
Bootstrap support for Q5CKW8 as seed ortholog is 100%.
Bootstrap support for L0PBH4 as seed ortholog is 100%.

Group of orthologs #49. Best score 548 bits
Score difference with first non-orthologous sequence - C.hominis:436 P.jiroveci:548

Q5CNZ8              	100.00%		L0PGS4              	100.00%
Bootstrap support for Q5CNZ8 as seed ortholog is 100%.
Bootstrap support for L0PGS4 as seed ortholog is 100%.

Group of orthologs #50. Best score 547 bits
Score difference with first non-orthologous sequence - C.hominis:547 P.jiroveci:239

Q5CN04              	100.00%		L0PFG7              	100.00%
Bootstrap support for Q5CN04 as seed ortholog is 100%.
Bootstrap support for L0PFG7 as seed ortholog is 100%.

Group of orthologs #51. Best score 544 bits
Score difference with first non-orthologous sequence - C.hominis:544 P.jiroveci:457

Q5CEQ9              	100.00%		L0PH89              	100.00%
Bootstrap support for Q5CEQ9 as seed ortholog is 100%.
Bootstrap support for L0PH89 as seed ortholog is 100%.

Group of orthologs #52. Best score 536 bits
Score difference with first non-orthologous sequence - C.hominis:536 P.jiroveci:536

Q5CKU7              	100.00%		L0PBV5              	100.00%
Bootstrap support for Q5CKU7 as seed ortholog is 100%.
Bootstrap support for L0PBV5 as seed ortholog is 100%.

Group of orthologs #53. Best score 525 bits
Score difference with first non-orthologous sequence - C.hominis:525 P.jiroveci:260

Q5CJF4              	100.00%		L0PG32              	100.00%
Bootstrap support for Q5CJF4 as seed ortholog is 100%.
Bootstrap support for L0PG32 as seed ortholog is 100%.

Group of orthologs #54. Best score 522 bits
Score difference with first non-orthologous sequence - C.hominis:295 P.jiroveci:522

Q5CNT6              	100.00%		L0PAR0              	100.00%
Bootstrap support for Q5CNT6 as seed ortholog is 100%.
Bootstrap support for L0PAR0 as seed ortholog is 100%.

Group of orthologs #55. Best score 517 bits
Score difference with first non-orthologous sequence - C.hominis:517 P.jiroveci:517

Q5CNN9              	100.00%		L0PAN4              	100.00%
Bootstrap support for Q5CNN9 as seed ortholog is 100%.
Bootstrap support for L0PAN4 as seed ortholog is 100%.

Group of orthologs #56. Best score 515 bits
Score difference with first non-orthologous sequence - C.hominis:515 P.jiroveci:515

Q5CGN7              	100.00%		L0PD31              	100.00%
Bootstrap support for Q5CGN7 as seed ortholog is 100%.
Bootstrap support for L0PD31 as seed ortholog is 100%.

Group of orthologs #57. Best score 505 bits
Score difference with first non-orthologous sequence - C.hominis:505 P.jiroveci:505

Q5CJW8              	100.00%		L0PC54              	100.00%
Bootstrap support for Q5CJW8 as seed ortholog is 100%.
Bootstrap support for L0PC54 as seed ortholog is 100%.

Group of orthologs #58. Best score 505 bits
Score difference with first non-orthologous sequence - C.hominis:262 P.jiroveci:129

Q5CNL9              	100.00%		L0PE26              	100.00%
Bootstrap support for Q5CNL9 as seed ortholog is 100%.
Bootstrap support for L0PE26 as seed ortholog is 98%.

Group of orthologs #59. Best score 501 bits
Score difference with first non-orthologous sequence - C.hominis:501 P.jiroveci:250

Q5CH83              	100.00%		L0PG07              	100.00%
Bootstrap support for Q5CH83 as seed ortholog is 100%.
Bootstrap support for L0PG07 as seed ortholog is 99%.

Group of orthologs #60. Best score 501 bits
Score difference with first non-orthologous sequence - C.hominis:501 P.jiroveci:436

Q5CGC0              	100.00%		L0PH85              	100.00%
Bootstrap support for Q5CGC0 as seed ortholog is 100%.
Bootstrap support for L0PH85 as seed ortholog is 100%.

Group of orthologs #61. Best score 492 bits
Score difference with first non-orthologous sequence - C.hominis:89 P.jiroveci:492

Q5CI65              	100.00%		L0PG61              	100.00%
                    	       		L0PAC9              	8.72%
Bootstrap support for Q5CI65 as seed ortholog is 89%.
Bootstrap support for L0PG61 as seed ortholog is 100%.

Group of orthologs #62. Best score 485 bits
Score difference with first non-orthologous sequence - C.hominis:287 P.jiroveci:299

Q5CP59              	100.00%		L0PDY0              	100.00%
Bootstrap support for Q5CP59 as seed ortholog is 100%.
Bootstrap support for L0PDY0 as seed ortholog is 100%.

Group of orthologs #63. Best score 482 bits
Score difference with first non-orthologous sequence - C.hominis:482 P.jiroveci:482

Q5CLK3              	100.00%		L0PDM6              	100.00%
Bootstrap support for Q5CLK3 as seed ortholog is 100%.
Bootstrap support for L0PDM6 as seed ortholog is 100%.

Group of orthologs #64. Best score 480 bits
Score difference with first non-orthologous sequence - C.hominis:7 P.jiroveci:177

Q5CLI0              	100.00%		L0PCK5              	100.00%
Bootstrap support for Q5CLI0 as seed ortholog is 57%.
Alternative seed ortholog is Q5CMT9 (7 bits away from this cluster)
Bootstrap support for L0PCK5 as seed ortholog is 100%.

Group of orthologs #65. Best score 477 bits
Score difference with first non-orthologous sequence - C.hominis:100 P.jiroveci:53

Q5CKH9              	100.00%		L0P7V6              	100.00%
Bootstrap support for Q5CKH9 as seed ortholog is 99%.
Bootstrap support for L0P7V6 as seed ortholog is 96%.

Group of orthologs #66. Best score 477 bits
Score difference with first non-orthologous sequence - C.hominis:477 P.jiroveci:477

Q5CN58              	100.00%		L0P7T0              	100.00%
Bootstrap support for Q5CN58 as seed ortholog is 100%.
Bootstrap support for L0P7T0 as seed ortholog is 100%.

Group of orthologs #67. Best score 475 bits
Score difference with first non-orthologous sequence - C.hominis:475 P.jiroveci:475

Q5CJG1              	100.00%		L0PB85              	100.00%
Bootstrap support for Q5CJG1 as seed ortholog is 100%.
Bootstrap support for L0PB85 as seed ortholog is 100%.

Group of orthologs #68. Best score 468 bits
Score difference with first non-orthologous sequence - C.hominis:468 P.jiroveci:468

Q5CJZ3              	100.00%		L0P773              	100.00%
Bootstrap support for Q5CJZ3 as seed ortholog is 100%.
Bootstrap support for L0P773 as seed ortholog is 100%.

Group of orthologs #69. Best score 461 bits
Score difference with first non-orthologous sequence - C.hominis:461 P.jiroveci:461

Q5CNX3              	100.00%		L0PBW1              	100.00%
Bootstrap support for Q5CNX3 as seed ortholog is 100%.
Bootstrap support for L0PBW1 as seed ortholog is 100%.

Group of orthologs #70. Best score 459 bits
Score difference with first non-orthologous sequence - C.hominis:67 P.jiroveci:120

Q5CKG0              	100.00%		L0P890              	100.00%
Bootstrap support for Q5CKG0 as seed ortholog is 97%.
Bootstrap support for L0P890 as seed ortholog is 99%.

Group of orthologs #71. Best score 450 bits
Score difference with first non-orthologous sequence - C.hominis:178 P.jiroveci:56

Q5CMT2              	100.00%		L0PFW2              	100.00%
Bootstrap support for Q5CMT2 as seed ortholog is 100%.
Bootstrap support for L0PFW2 as seed ortholog is 94%.

Group of orthologs #72. Best score 447 bits
Score difference with first non-orthologous sequence - C.hominis:447 P.jiroveci:447

Q5CN90              	100.00%		L0PC65              	100.00%
Bootstrap support for Q5CN90 as seed ortholog is 100%.
Bootstrap support for L0PC65 as seed ortholog is 100%.

Group of orthologs #73. Best score 444 bits
Score difference with first non-orthologous sequence - C.hominis:178 P.jiroveci:238

Q5CGM4              	100.00%		L0PIF0              	100.00%
Bootstrap support for Q5CGM4 as seed ortholog is 98%.
Bootstrap support for L0PIF0 as seed ortholog is 99%.

Group of orthologs #74. Best score 443 bits
Score difference with first non-orthologous sequence - C.hominis:153 P.jiroveci:89

Q5CHW7              	100.00%		L0P7D9              	100.00%
Bootstrap support for Q5CHW7 as seed ortholog is 100%.
Bootstrap support for L0P7D9 as seed ortholog is 99%.

Group of orthologs #75. Best score 435 bits
Score difference with first non-orthologous sequence - C.hominis:435 P.jiroveci:435

Q5CES8              	100.00%		L0PA45              	100.00%
Bootstrap support for Q5CES8 as seed ortholog is 100%.
Bootstrap support for L0PA45 as seed ortholog is 100%.

Group of orthologs #76. Best score 433 bits
Score difference with first non-orthologous sequence - C.hominis:433 P.jiroveci:433

Q5CKX0              	100.00%		L0PBR9              	100.00%
Bootstrap support for Q5CKX0 as seed ortholog is 100%.
Bootstrap support for L0PBR9 as seed ortholog is 100%.

Group of orthologs #77. Best score 432 bits
Score difference with first non-orthologous sequence - C.hominis:288 P.jiroveci:136

Q5CFY6              	100.00%		L0PA75              	100.00%
Bootstrap support for Q5CFY6 as seed ortholog is 100%.
Bootstrap support for L0PA75 as seed ortholog is 99%.

Group of orthologs #78. Best score 429 bits
Score difference with first non-orthologous sequence - C.hominis:429 P.jiroveci:429

Q5CMW6              	100.00%		L0PER3              	100.00%
Bootstrap support for Q5CMW6 as seed ortholog is 100%.
Bootstrap support for L0PER3 as seed ortholog is 100%.

Group of orthologs #79. Best score 423 bits
Score difference with first non-orthologous sequence - C.hominis:423 P.jiroveci:423

Q5CI16              	100.00%		L0PDJ1              	100.00%
Bootstrap support for Q5CI16 as seed ortholog is 100%.
Bootstrap support for L0PDJ1 as seed ortholog is 100%.

Group of orthologs #80. Best score 422 bits
Score difference with first non-orthologous sequence - C.hominis:422 P.jiroveci:422

Q5CK12              	100.00%		L0PBF3              	100.00%
Bootstrap support for Q5CK12 as seed ortholog is 100%.
Bootstrap support for L0PBF3 as seed ortholog is 100%.

Group of orthologs #81. Best score 421 bits
Score difference with first non-orthologous sequence - C.hominis:421 P.jiroveci:233

Q5CIF5              	100.00%		L0PAU1              	100.00%
Bootstrap support for Q5CIF5 as seed ortholog is 100%.
Bootstrap support for L0PAU1 as seed ortholog is 100%.

Group of orthologs #82. Best score 420 bits
Score difference with first non-orthologous sequence - C.hominis:162 P.jiroveci:420

Q5CH49              	100.00%		L0P8E8              	100.00%
                    	       		L0PEB0              	100.00%
Bootstrap support for Q5CH49 as seed ortholog is 99%.
Bootstrap support for L0P8E8 as seed ortholog is 100%.
Bootstrap support for L0PEB0 as seed ortholog is 100%.

Group of orthologs #83. Best score 411 bits
Score difference with first non-orthologous sequence - C.hominis:411 P.jiroveci:411

Q5CGE0              	100.00%		L0PDH7              	100.00%
Bootstrap support for Q5CGE0 as seed ortholog is 100%.
Bootstrap support for L0PDH7 as seed ortholog is 100%.

Group of orthologs #84. Best score 409 bits
Score difference with first non-orthologous sequence - C.hominis:329 P.jiroveci:273

Q5CG32              	100.00%		L0P8C2              	100.00%
Bootstrap support for Q5CG32 as seed ortholog is 100%.
Bootstrap support for L0P8C2 as seed ortholog is 100%.

Group of orthologs #85. Best score 409 bits
Score difference with first non-orthologous sequence - C.hominis:409 P.jiroveci:307

Q5CJ18              	100.00%		L0PB35              	100.00%
Bootstrap support for Q5CJ18 as seed ortholog is 100%.
Bootstrap support for L0PB35 as seed ortholog is 100%.

Group of orthologs #86. Best score 404 bits
Score difference with first non-orthologous sequence - C.hominis:404 P.jiroveci:404

Q5CMN2              	100.00%		L0PC44              	100.00%
Bootstrap support for Q5CMN2 as seed ortholog is 100%.
Bootstrap support for L0PC44 as seed ortholog is 100%.

Group of orthologs #87. Best score 403 bits
Score difference with first non-orthologous sequence - C.hominis:403 P.jiroveci:403

Q5CKT8              	100.00%		L0P9W2              	100.00%
Bootstrap support for Q5CKT8 as seed ortholog is 100%.
Bootstrap support for L0P9W2 as seed ortholog is 100%.

Group of orthologs #88. Best score 399 bits
Score difference with first non-orthologous sequence - C.hominis:399 P.jiroveci:399

Q5CNS9              	100.00%		L0P8M6              	100.00%
Bootstrap support for Q5CNS9 as seed ortholog is 100%.
Bootstrap support for L0P8M6 as seed ortholog is 100%.

Group of orthologs #89. Best score 397 bits
Score difference with first non-orthologous sequence - C.hominis:397 P.jiroveci:397

Q5CGS3              	100.00%		L0P6R7              	100.00%
Bootstrap support for Q5CGS3 as seed ortholog is 100%.
Bootstrap support for L0P6R7 as seed ortholog is 100%.

Group of orthologs #90. Best score 395 bits
Score difference with first non-orthologous sequence - C.hominis:395 P.jiroveci:395

Q5CHM0              	100.00%		L0PC79              	100.00%
Bootstrap support for Q5CHM0 as seed ortholog is 100%.
Bootstrap support for L0PC79 as seed ortholog is 100%.

Group of orthologs #91. Best score 395 bits
Score difference with first non-orthologous sequence - C.hominis:395 P.jiroveci:395

Q5CP64              	100.00%		L0P6Y2              	100.00%
Bootstrap support for Q5CP64 as seed ortholog is 100%.
Bootstrap support for L0P6Y2 as seed ortholog is 100%.

Group of orthologs #92. Best score 394 bits
Score difference with first non-orthologous sequence - C.hominis:163 P.jiroveci:394

Q5CJE5              	100.00%		L0P905              	100.00%
Q5CG30              	16.23%		
Bootstrap support for Q5CJE5 as seed ortholog is 99%.
Bootstrap support for L0P905 as seed ortholog is 100%.

Group of orthologs #93. Best score 394 bits
Score difference with first non-orthologous sequence - C.hominis:277 P.jiroveci:394

Q5CLD2              	100.00%		L0P921              	100.00%
Bootstrap support for Q5CLD2 as seed ortholog is 100%.
Bootstrap support for L0P921 as seed ortholog is 100%.

Group of orthologs #94. Best score 393 bits
Score difference with first non-orthologous sequence - C.hominis:393 P.jiroveci:393

Q5CM20              	100.00%		L0PEE4              	100.00%
Bootstrap support for Q5CM20 as seed ortholog is 100%.
Bootstrap support for L0PEE4 as seed ortholog is 100%.

Group of orthologs #95. Best score 392 bits
Score difference with first non-orthologous sequence - C.hominis:308 P.jiroveci:392

Q5CGM0              	100.00%		L0PB50              	100.00%
Bootstrap support for Q5CGM0 as seed ortholog is 100%.
Bootstrap support for L0PB50 as seed ortholog is 100%.

Group of orthologs #96. Best score 388 bits
Score difference with first non-orthologous sequence - C.hominis:388 P.jiroveci:276

Q5CJ77              	100.00%		L0P7M4              	100.00%
                    	       		L0PH62              	54.17%
Bootstrap support for Q5CJ77 as seed ortholog is 100%.
Bootstrap support for L0P7M4 as seed ortholog is 100%.

Group of orthologs #97. Best score 388 bits
Score difference with first non-orthologous sequence - C.hominis:81 P.jiroveci:388

Q5CIU1              	100.00%		L0PHY6              	100.00%
Bootstrap support for Q5CIU1 as seed ortholog is 93%.
Bootstrap support for L0PHY6 as seed ortholog is 100%.

Group of orthologs #98. Best score 385 bits
Score difference with first non-orthologous sequence - C.hominis:385 P.jiroveci:385

Q5CI59              	100.00%		L0PCY5              	100.00%
Bootstrap support for Q5CI59 as seed ortholog is 100%.
Bootstrap support for L0PCY5 as seed ortholog is 100%.

Group of orthologs #99. Best score 381 bits
Score difference with first non-orthologous sequence - C.hominis:381 P.jiroveci:381

Q5CKF2              	100.00%		L0PGU0              	100.00%
Bootstrap support for Q5CKF2 as seed ortholog is 100%.
Bootstrap support for L0PGU0 as seed ortholog is 100%.

Group of orthologs #100. Best score 379 bits
Score difference with first non-orthologous sequence - C.hominis:379 P.jiroveci:379

Q5CGB0              	100.00%		L0P9D4              	100.00%
Bootstrap support for Q5CGB0 as seed ortholog is 100%.
Bootstrap support for L0P9D4 as seed ortholog is 100%.

Group of orthologs #101. Best score 379 bits
Score difference with first non-orthologous sequence - C.hominis:379 P.jiroveci:379

Q5CKC5              	100.00%		L0PF49              	100.00%
Bootstrap support for Q5CKC5 as seed ortholog is 100%.
Bootstrap support for L0PF49 as seed ortholog is 100%.

Group of orthologs #102. Best score 370 bits
Score difference with first non-orthologous sequence - C.hominis:167 P.jiroveci:370

Q5CHB7              	100.00%		L0P6W8              	100.00%
                    	       		L0PH46              	100.00%
Bootstrap support for Q5CHB7 as seed ortholog is 99%.
Bootstrap support for L0P6W8 as seed ortholog is 100%.
Bootstrap support for L0PH46 as seed ortholog is 100%.

Group of orthologs #103. Best score 369 bits
Score difference with first non-orthologous sequence - C.hominis:369 P.jiroveci:307

Q5CEB9              	100.00%		L0PCS3              	100.00%
Bootstrap support for Q5CEB9 as seed ortholog is 100%.
Bootstrap support for L0PCS3 as seed ortholog is 100%.

Group of orthologs #104. Best score 369 bits
Score difference with first non-orthologous sequence - C.hominis:170 P.jiroveci:156

Q5CJC3              	100.00%		L0PGV4              	100.00%
Bootstrap support for Q5CJC3 as seed ortholog is 100%.
Bootstrap support for L0PGV4 as seed ortholog is 99%.

Group of orthologs #105. Best score 364 bits
Score difference with first non-orthologous sequence - C.hominis:364 P.jiroveci:364

Q5CIY0              	100.00%		L0PCB2              	100.00%
Bootstrap support for Q5CIY0 as seed ortholog is 100%.
Bootstrap support for L0PCB2 as seed ortholog is 100%.

Group of orthologs #106. Best score 364 bits
Score difference with first non-orthologous sequence - C.hominis:241 P.jiroveci:364

Q5CNA8              	100.00%		L0P8N1              	100.00%
Bootstrap support for Q5CNA8 as seed ortholog is 100%.
Bootstrap support for L0P8N1 as seed ortholog is 100%.

Group of orthologs #107. Best score 364 bits
Score difference with first non-orthologous sequence - C.hominis:364 P.jiroveci:364

Q5CIV6              	100.00%		L0PDI6              	100.00%
Bootstrap support for Q5CIV6 as seed ortholog is 100%.
Bootstrap support for L0PDI6 as seed ortholog is 100%.

Group of orthologs #108. Best score 364 bits
Score difference with first non-orthologous sequence - C.hominis:364 P.jiroveci:364

Q5CNT1              	100.00%		L0PDK6              	100.00%
Bootstrap support for Q5CNT1 as seed ortholog is 100%.
Bootstrap support for L0PDK6 as seed ortholog is 100%.

Group of orthologs #109. Best score 361 bits
Score difference with first non-orthologous sequence - C.hominis:361 P.jiroveci:361

Q5CHA9              	100.00%		L0PC37              	100.00%
Bootstrap support for Q5CHA9 as seed ortholog is 100%.
Bootstrap support for L0PC37 as seed ortholog is 100%.

Group of orthologs #110. Best score 360 bits
Score difference with first non-orthologous sequence - C.hominis:233 P.jiroveci:312

Q5CMF1              	100.00%		L0PAL3              	100.00%
Bootstrap support for Q5CMF1 as seed ortholog is 100%.
Bootstrap support for L0PAL3 as seed ortholog is 100%.

Group of orthologs #111. Best score 359 bits
Score difference with first non-orthologous sequence - C.hominis:359 P.jiroveci:359

Q5CHW9              	100.00%		L0P7Z6              	100.00%
Bootstrap support for Q5CHW9 as seed ortholog is 100%.
Bootstrap support for L0P7Z6 as seed ortholog is 100%.

Group of orthologs #112. Best score 357 bits
Score difference with first non-orthologous sequence - C.hominis:241 P.jiroveci:281

Q5CDQ3              	100.00%		L0PG55              	100.00%
Bootstrap support for Q5CDQ3 as seed ortholog is 100%.
Bootstrap support for L0PG55 as seed ortholog is 100%.

Group of orthologs #113. Best score 355 bits
Score difference with first non-orthologous sequence - C.hominis:355 P.jiroveci:355

Q5CGV5              	100.00%		L0P8Z3              	100.00%
Bootstrap support for Q5CGV5 as seed ortholog is 100%.
Bootstrap support for L0P8Z3 as seed ortholog is 100%.

Group of orthologs #114. Best score 355 bits
Score difference with first non-orthologous sequence - C.hominis:286 P.jiroveci:355

Q5CFL8              	100.00%		L0PI36              	100.00%
Bootstrap support for Q5CFL8 as seed ortholog is 100%.
Bootstrap support for L0PI36 as seed ortholog is 100%.

Group of orthologs #115. Best score 353 bits
Score difference with first non-orthologous sequence - C.hominis:1 P.jiroveci:353

Q5CHQ5              	100.00%		L0PGU1              	100.00%
Q5CM64              	6.71%		L0PH47              	6.97%
Bootstrap support for Q5CHQ5 as seed ortholog is 83%.
Bootstrap support for L0PGU1 as seed ortholog is 100%.

Group of orthologs #116. Best score 351 bits
Score difference with first non-orthologous sequence - C.hominis:351 P.jiroveci:297

Q5CJR9              	100.00%		L0PID0              	100.00%
Bootstrap support for Q5CJR9 as seed ortholog is 100%.
Bootstrap support for L0PID0 as seed ortholog is 100%.

Group of orthologs #117. Best score 350 bits
Score difference with first non-orthologous sequence - C.hominis:48 P.jiroveci:53

Q5CKW2              	100.00%		L0PAY3              	100.00%
Bootstrap support for Q5CKW2 as seed ortholog is 92%.
Bootstrap support for L0PAY3 as seed ortholog is 94%.

Group of orthologs #118. Best score 348 bits
Score difference with first non-orthologous sequence - C.hominis:348 P.jiroveci:348

Q5CK95              	100.00%		L0PCN1              	100.00%
Bootstrap support for Q5CK95 as seed ortholog is 100%.
Bootstrap support for L0PCN1 as seed ortholog is 100%.

Group of orthologs #119. Best score 347 bits
Score difference with first non-orthologous sequence - C.hominis:155 P.jiroveci:347

Q5CIG0              	100.00%		L0PB24              	100.00%
Bootstrap support for Q5CIG0 as seed ortholog is 99%.
Bootstrap support for L0PB24 as seed ortholog is 100%.

Group of orthologs #120. Best score 347 bits
Score difference with first non-orthologous sequence - C.hominis:347 P.jiroveci:347

Q5CIJ4              	100.00%		L0PDU2              	100.00%
Bootstrap support for Q5CIJ4 as seed ortholog is 100%.
Bootstrap support for L0PDU2 as seed ortholog is 100%.

Group of orthologs #121. Best score 346 bits
Score difference with first non-orthologous sequence - C.hominis:302 P.jiroveci:346

Q5CHG8              	100.00%		L0PBA8              	100.00%
Q5CFE3              	15.52%		
Bootstrap support for Q5CHG8 as seed ortholog is 100%.
Bootstrap support for L0PBA8 as seed ortholog is 100%.

Group of orthologs #122. Best score 344 bits
Score difference with first non-orthologous sequence - C.hominis:216 P.jiroveci:344

Q5CLU3              	100.00%		L0PE19              	100.00%
Bootstrap support for Q5CLU3 as seed ortholog is 100%.
Bootstrap support for L0PE19 as seed ortholog is 100%.

Group of orthologs #123. Best score 342 bits
Score difference with first non-orthologous sequence - C.hominis:342 P.jiroveci:342

Q5CE61              	100.00%		L0PG19              	100.00%
Bootstrap support for Q5CE61 as seed ortholog is 100%.
Bootstrap support for L0PG19 as seed ortholog is 100%.

Group of orthologs #124. Best score 341 bits
Score difference with first non-orthologous sequence - C.hominis:121 P.jiroveci:159

Q5CG16              	100.00%		L0P8Y6              	100.00%
Bootstrap support for Q5CG16 as seed ortholog is 99%.
Bootstrap support for L0P8Y6 as seed ortholog is 99%.

Group of orthologs #125. Best score 341 bits
Score difference with first non-orthologous sequence - C.hominis:341 P.jiroveci:199

Q5CGY3              	100.00%		L0PGT9              	100.00%
Bootstrap support for Q5CGY3 as seed ortholog is 100%.
Bootstrap support for L0PGT9 as seed ortholog is 99%.

Group of orthologs #126. Best score 341 bits
Score difference with first non-orthologous sequence - C.hominis:190 P.jiroveci:177

Q5CNJ7              	100.00%		L0PBY8              	100.00%
Bootstrap support for Q5CNJ7 as seed ortholog is 100%.
Bootstrap support for L0PBY8 as seed ortholog is 100%.

Group of orthologs #127. Best score 339 bits
Score difference with first non-orthologous sequence - C.hominis:339 P.jiroveci:339

Q5CIR3              	100.00%		L0PFP2              	100.00%
Bootstrap support for Q5CIR3 as seed ortholog is 100%.
Bootstrap support for L0PFP2 as seed ortholog is 100%.

Group of orthologs #128. Best score 337 bits
Score difference with first non-orthologous sequence - C.hominis:337 P.jiroveci:337

Q5CIW7              	100.00%		L0PEL5              	100.00%
                    	       		L0PGC2              	100.00%
Bootstrap support for Q5CIW7 as seed ortholog is 100%.
Bootstrap support for L0PEL5 as seed ortholog is 100%.
Bootstrap support for L0PGC2 as seed ortholog is 100%.

Group of orthologs #129. Best score 336 bits
Score difference with first non-orthologous sequence - C.hominis:336 P.jiroveci:336

Q5CG04              	100.00%		L0PFQ8              	100.00%
Bootstrap support for Q5CG04 as seed ortholog is 100%.
Bootstrap support for L0PFQ8 as seed ortholog is 100%.

Group of orthologs #130. Best score 334 bits
Score difference with first non-orthologous sequence - C.hominis:334 P.jiroveci:334

Q5CK89              	100.00%		L0P8P8              	100.00%
Bootstrap support for Q5CK89 as seed ortholog is 100%.
Bootstrap support for L0P8P8 as seed ortholog is 100%.

Group of orthologs #131. Best score 332 bits
Score difference with first non-orthologous sequence - C.hominis:332 P.jiroveci:165

Q5CGC1              	100.00%		L0P7L0              	100.00%
                    	       		L0PCI7              	53.00%
Bootstrap support for Q5CGC1 as seed ortholog is 100%.
Bootstrap support for L0P7L0 as seed ortholog is 99%.

Group of orthologs #132. Best score 332 bits
Score difference with first non-orthologous sequence - C.hominis:193 P.jiroveci:104

Q5CMJ1              	100.00%		L0PB21              	100.00%
Bootstrap support for Q5CMJ1 as seed ortholog is 100%.
Bootstrap support for L0PB21 as seed ortholog is 99%.

Group of orthologs #133. Best score 331 bits
Score difference with first non-orthologous sequence - C.hominis:331 P.jiroveci:331

Q5CNY8              	100.00%		L0PBN4              	100.00%
Bootstrap support for Q5CNY8 as seed ortholog is 100%.
Bootstrap support for L0PBN4 as seed ortholog is 100%.

Group of orthologs #134. Best score 331 bits
Score difference with first non-orthologous sequence - C.hominis:331 P.jiroveci:331

Q5CN07              	100.00%		L0PFC2              	100.00%
Bootstrap support for Q5CN07 as seed ortholog is 100%.
Bootstrap support for L0PFC2 as seed ortholog is 100%.

Group of orthologs #135. Best score 324 bits
Score difference with first non-orthologous sequence - C.hominis:324 P.jiroveci:324

Q5CHH7              	100.00%		L0PFU4              	100.00%
Bootstrap support for Q5CHH7 as seed ortholog is 100%.
Bootstrap support for L0PFU4 as seed ortholog is 100%.

Group of orthologs #136. Best score 324 bits
Score difference with first non-orthologous sequence - C.hominis:71 P.jiroveci:154

Q5CL88              	100.00%		L0PEM1              	100.00%
Bootstrap support for Q5CL88 as seed ortholog is 95%.
Bootstrap support for L0PEM1 as seed ortholog is 99%.

Group of orthologs #137. Best score 323 bits
Score difference with first non-orthologous sequence - C.hominis:323 P.jiroveci:323

Q5CLX5              	100.00%		L0P802              	100.00%
Bootstrap support for Q5CLX5 as seed ortholog is 100%.
Bootstrap support for L0P802 as seed ortholog is 100%.

Group of orthologs #138. Best score 323 bits
Score difference with first non-orthologous sequence - C.hominis:323 P.jiroveci:200

Q5CMG4              	100.00%		L0PDG5              	100.00%
Bootstrap support for Q5CMG4 as seed ortholog is 100%.
Bootstrap support for L0PDG5 as seed ortholog is 100%.

Group of orthologs #139. Best score 323 bits
Score difference with first non-orthologous sequence - C.hominis:323 P.jiroveci:323

Q5CP32              	100.00%		L0PDM0              	100.00%
Bootstrap support for Q5CP32 as seed ortholog is 100%.
Bootstrap support for L0PDM0 as seed ortholog is 100%.

Group of orthologs #140. Best score 322 bits
Score difference with first non-orthologous sequence - C.hominis:322 P.jiroveci:322

Q5CHV3              	100.00%		L0PEE3              	100.00%
Bootstrap support for Q5CHV3 as seed ortholog is 100%.
Bootstrap support for L0PEE3 as seed ortholog is 100%.

Group of orthologs #141. Best score 322 bits
Score difference with first non-orthologous sequence - C.hominis:322 P.jiroveci:322

Q5CJU4              	100.00%		L0PGF5              	100.00%
Bootstrap support for Q5CJU4 as seed ortholog is 100%.
Bootstrap support for L0PGF5 as seed ortholog is 100%.

Group of orthologs #142. Best score 320 bits
Score difference with first non-orthologous sequence - C.hominis:320 P.jiroveci:320

Q5CNR5              	100.00%		L0P8R6              	100.00%
Bootstrap support for Q5CNR5 as seed ortholog is 100%.
Bootstrap support for L0P8R6 as seed ortholog is 100%.

Group of orthologs #143. Best score 314 bits
Score difference with first non-orthologous sequence - C.hominis:314 P.jiroveci:314

Q5CJA8              	100.00%		L0PEA7              	100.00%
Bootstrap support for Q5CJA8 as seed ortholog is 100%.
Bootstrap support for L0PEA7 as seed ortholog is 100%.

Group of orthologs #144. Best score 314 bits
Score difference with first non-orthologous sequence - C.hominis:314 P.jiroveci:314

Q5CNV5              	100.00%		L0PBD7              	100.00%
Bootstrap support for Q5CNV5 as seed ortholog is 100%.
Bootstrap support for L0PBD7 as seed ortholog is 100%.

Group of orthologs #145. Best score 311 bits
Score difference with first non-orthologous sequence - C.hominis:311 P.jiroveci:123

Q5CK04              	100.00%		L0PC30              	100.00%
Bootstrap support for Q5CK04 as seed ortholog is 100%.
Bootstrap support for L0PC30 as seed ortholog is 99%.

Group of orthologs #146. Best score 311 bits
Score difference with first non-orthologous sequence - C.hominis:311 P.jiroveci:188

Q5CN50              	100.00%		L0PDG3              	100.00%
Bootstrap support for Q5CN50 as seed ortholog is 100%.
Bootstrap support for L0PDG3 as seed ortholog is 99%.

Group of orthologs #147. Best score 309 bits
Score difference with first non-orthologous sequence - C.hominis:309 P.jiroveci:309

Q5CMJ6              	100.00%		L0PC99              	100.00%
Bootstrap support for Q5CMJ6 as seed ortholog is 100%.
Bootstrap support for L0PC99 as seed ortholog is 100%.

Group of orthologs #148. Best score 309 bits
Score difference with first non-orthologous sequence - C.hominis:143 P.jiroveci:101

Q5CP90              	100.00%		L0PBI1              	100.00%
Bootstrap support for Q5CP90 as seed ortholog is 99%.
Bootstrap support for L0PBI1 as seed ortholog is 97%.

Group of orthologs #149. Best score 306 bits
Score difference with first non-orthologous sequence - C.hominis:113 P.jiroveci:151

Q5CFQ7              	100.00%		L0PBU4              	100.00%
Bootstrap support for Q5CFQ7 as seed ortholog is 99%.
Bootstrap support for L0PBU4 as seed ortholog is 99%.

Group of orthologs #150. Best score 304 bits
Score difference with first non-orthologous sequence - C.hominis:304 P.jiroveci:304

Q5CK52              	100.00%		L0P9U3              	100.00%
Bootstrap support for Q5CK52 as seed ortholog is 100%.
Bootstrap support for L0P9U3 as seed ortholog is 100%.

Group of orthologs #151. Best score 303 bits
Score difference with first non-orthologous sequence - C.hominis:303 P.jiroveci:303

Q5CFN6              	100.00%		L0PAG0              	100.00%
Bootstrap support for Q5CFN6 as seed ortholog is 100%.
Bootstrap support for L0PAG0 as seed ortholog is 100%.

Group of orthologs #152. Best score 301 bits
Score difference with first non-orthologous sequence - C.hominis:122 P.jiroveci:207

Q5CDM8              	100.00%		L0PE30              	100.00%
Bootstrap support for Q5CDM8 as seed ortholog is 99%.
Bootstrap support for L0PE30 as seed ortholog is 100%.

Group of orthologs #153. Best score 300 bits
Score difference with first non-orthologous sequence - C.hominis:300 P.jiroveci:300

Q5CN14              	100.00%		L0P7V1              	100.00%
Bootstrap support for Q5CN14 as seed ortholog is 100%.
Bootstrap support for L0P7V1 as seed ortholog is 100%.

Group of orthologs #154. Best score 299 bits
Score difference with first non-orthologous sequence - C.hominis:299 P.jiroveci:299

Q5CJV0              	100.00%		L0PAS8              	100.00%
Bootstrap support for Q5CJV0 as seed ortholog is 100%.
Bootstrap support for L0PAS8 as seed ortholog is 100%.

Group of orthologs #155. Best score 299 bits
Score difference with first non-orthologous sequence - C.hominis:121 P.jiroveci:299

Q5CM80              	100.00%		L0PCX1              	100.00%
Bootstrap support for Q5CM80 as seed ortholog is 99%.
Bootstrap support for L0PCX1 as seed ortholog is 100%.

Group of orthologs #156. Best score 298 bits
Score difference with first non-orthologous sequence - C.hominis:110 P.jiroveci:73

Q5CM39              	100.00%		L0PGJ9              	100.00%
Bootstrap support for Q5CM39 as seed ortholog is 99%.
Bootstrap support for L0PGJ9 as seed ortholog is 91%.

Group of orthologs #157. Best score 297 bits
Score difference with first non-orthologous sequence - C.hominis:195 P.jiroveci:139

Q5CKZ5              	100.00%		L0PG34              	100.00%
Bootstrap support for Q5CKZ5 as seed ortholog is 99%.
Bootstrap support for L0PG34 as seed ortholog is 99%.

Group of orthologs #158. Best score 296 bits
Score difference with first non-orthologous sequence - C.hominis:296 P.jiroveci:165

Q5CNG1              	100.00%		L0PH03              	100.00%
Bootstrap support for Q5CNG1 as seed ortholog is 100%.
Bootstrap support for L0PH03 as seed ortholog is 100%.

Group of orthologs #159. Best score 295 bits
Score difference with first non-orthologous sequence - C.hominis:31 P.jiroveci:295

Q5CJN1              	100.00%		L0PGL4              	100.00%
                    	       		L0P7Q7              	42.95%
                    	       		L0PB83              	7.71%
Bootstrap support for Q5CJN1 as seed ortholog is 79%.
Bootstrap support for L0PGL4 as seed ortholog is 100%.

Group of orthologs #160. Best score 295 bits
Score difference with first non-orthologous sequence - C.hominis:295 P.jiroveci:295

Q5CEM8              	100.00%		L0P9U8              	100.00%
Bootstrap support for Q5CEM8 as seed ortholog is 100%.
Bootstrap support for L0P9U8 as seed ortholog is 100%.

Group of orthologs #161. Best score 294 bits
Score difference with first non-orthologous sequence - C.hominis:126 P.jiroveci:45

Q5CJC4              	100.00%		L0P861              	100.00%
Bootstrap support for Q5CJC4 as seed ortholog is 100%.
Bootstrap support for L0P861 as seed ortholog is 92%.

Group of orthologs #162. Best score 294 bits
Score difference with first non-orthologous sequence - C.hominis:294 P.jiroveci:193

Q5CIQ8              	100.00%		L0PBU6              	100.00%
Bootstrap support for Q5CIQ8 as seed ortholog is 100%.
Bootstrap support for L0PBU6 as seed ortholog is 100%.

Group of orthologs #163. Best score 294 bits
Score difference with first non-orthologous sequence - C.hominis:218 P.jiroveci:197

Q5CNF7              	100.00%		L0PEF5              	100.00%
Bootstrap support for Q5CNF7 as seed ortholog is 100%.
Bootstrap support for L0PEF5 as seed ortholog is 100%.

Group of orthologs #164. Best score 293 bits
Score difference with first non-orthologous sequence - C.hominis:293 P.jiroveci:293

Q5CG58              	100.00%		L0PED9              	100.00%
Bootstrap support for Q5CG58 as seed ortholog is 100%.
Bootstrap support for L0PED9 as seed ortholog is 100%.

Group of orthologs #165. Best score 293 bits
Score difference with first non-orthologous sequence - C.hominis:293 P.jiroveci:293

Q5CIE5              	100.00%		L0PF23              	100.00%
Bootstrap support for Q5CIE5 as seed ortholog is 100%.
Bootstrap support for L0PF23 as seed ortholog is 100%.

Group of orthologs #166. Best score 290 bits
Score difference with first non-orthologous sequence - C.hominis:143 P.jiroveci:100

Q5CFF4              	100.00%		L0PBP2              	100.00%
Bootstrap support for Q5CFF4 as seed ortholog is 97%.
Bootstrap support for L0PBP2 as seed ortholog is 61%.
Alternative seed ortholog is L0P7S4 (100 bits away from this cluster)

Group of orthologs #167. Best score 290 bits
Score difference with first non-orthologous sequence - C.hominis:61 P.jiroveci:116

Q5CHH4              	100.00%		L0P9Z0              	100.00%
Bootstrap support for Q5CHH4 as seed ortholog is 91%.
Bootstrap support for L0P9Z0 as seed ortholog is 99%.

Group of orthologs #168. Best score 290 bits
Score difference with first non-orthologous sequence - C.hominis:290 P.jiroveci:201

Q5CHE8              	100.00%		L0PAN7              	100.00%
Bootstrap support for Q5CHE8 as seed ortholog is 100%.
Bootstrap support for L0PAN7 as seed ortholog is 100%.

Group of orthologs #169. Best score 289 bits
Score difference with first non-orthologous sequence - C.hominis:289 P.jiroveci:289

Q5CI40              	100.00%		L0PBL0              	100.00%
Bootstrap support for Q5CI40 as seed ortholog is 100%.
Bootstrap support for L0PBL0 as seed ortholog is 100%.

Group of orthologs #170. Best score 289 bits
Score difference with first non-orthologous sequence - C.hominis:289 P.jiroveci:289

Q5CLT3              	100.00%		L0PDM3              	100.00%
Bootstrap support for Q5CLT3 as seed ortholog is 100%.
Bootstrap support for L0PDM3 as seed ortholog is 100%.

Group of orthologs #171. Best score 288 bits
Score difference with first non-orthologous sequence - C.hominis:288 P.jiroveci:288

Q5CKN1              	100.00%		L0P9X4              	100.00%
Bootstrap support for Q5CKN1 as seed ortholog is 100%.
Bootstrap support for L0P9X4 as seed ortholog is 100%.

Group of orthologs #172. Best score 285 bits
Score difference with first non-orthologous sequence - C.hominis:285 P.jiroveci:117

Q5CGD2              	100.00%		L0PCJ5              	100.00%
Bootstrap support for Q5CGD2 as seed ortholog is 100%.
Bootstrap support for L0PCJ5 as seed ortholog is 99%.

Group of orthologs #173. Best score 285 bits
Score difference with first non-orthologous sequence - C.hominis:285 P.jiroveci:285

Q5CP36              	100.00%		L0P7R1              	100.00%
Bootstrap support for Q5CP36 as seed ortholog is 100%.
Bootstrap support for L0P7R1 as seed ortholog is 100%.

Group of orthologs #174. Best score 284 bits
Score difference with first non-orthologous sequence - C.hominis:284 P.jiroveci:284

Q5CGA3              	100.00%		L0PA65              	100.00%
Bootstrap support for Q5CGA3 as seed ortholog is 100%.
Bootstrap support for L0PA65 as seed ortholog is 100%.

Group of orthologs #175. Best score 284 bits
Score difference with first non-orthologous sequence - C.hominis:284 P.jiroveci:284

Q5CNV3              	100.00%		L0PA88              	100.00%
Bootstrap support for Q5CNV3 as seed ortholog is 100%.
Bootstrap support for L0PA88 as seed ortholog is 100%.

Group of orthologs #176. Best score 282 bits
Score difference with first non-orthologous sequence - C.hominis:19 P.jiroveci:105

Q5CKB1              	100.00%		L0PAY5              	100.00%
Bootstrap support for Q5CKB1 as seed ortholog is 69%.
Alternative seed ortholog is Q5CP78 (19 bits away from this cluster)
Bootstrap support for L0PAY5 as seed ortholog is 99%.

Group of orthologs #177. Best score 282 bits
Score difference with first non-orthologous sequence - C.hominis:282 P.jiroveci:282

Q5CME4              	100.00%		L0PCA7              	100.00%
Bootstrap support for Q5CME4 as seed ortholog is 100%.
Bootstrap support for L0PCA7 as seed ortholog is 100%.

Group of orthologs #178. Best score 281 bits
Score difference with first non-orthologous sequence - C.hominis:281 P.jiroveci:281

Q5CMN4              	100.00%		L0P9I4              	100.00%
Bootstrap support for Q5CMN4 as seed ortholog is 100%.
Bootstrap support for L0P9I4 as seed ortholog is 100%.

Group of orthologs #179. Best score 280 bits
Score difference with first non-orthologous sequence - C.hominis:280 P.jiroveci:280

Q5CIC0              	100.00%		L0PFI2              	100.00%
Bootstrap support for Q5CIC0 as seed ortholog is 100%.
Bootstrap support for L0PFI2 as seed ortholog is 100%.

Group of orthologs #180. Best score 280 bits
Score difference with first non-orthologous sequence - C.hominis:280 P.jiroveci:280

Q5CNB9              	100.00%		L0PCL4              	100.00%
Bootstrap support for Q5CNB9 as seed ortholog is 100%.
Bootstrap support for L0PCL4 as seed ortholog is 100%.

Group of orthologs #181. Best score 279 bits
Score difference with first non-orthologous sequence - C.hominis:279 P.jiroveci:64

Q5CJV9              	100.00%		L0P6U6              	100.00%
Bootstrap support for Q5CJV9 as seed ortholog is 100%.
Bootstrap support for L0P6U6 as seed ortholog is 95%.

Group of orthologs #182. Best score 272 bits
Score difference with first non-orthologous sequence - C.hominis:272 P.jiroveci:204

Q5CI34              	100.00%		L0PFP6              	100.00%
Bootstrap support for Q5CI34 as seed ortholog is 100%.
Bootstrap support for L0PFP6 as seed ortholog is 100%.

Group of orthologs #183. Best score 270 bits
Score difference with first non-orthologous sequence - C.hominis:270 P.jiroveci:270

Q5CLM2              	100.00%		L0PF72              	100.00%
                    	       		L0P9J9              	21.34%
Bootstrap support for Q5CLM2 as seed ortholog is 100%.
Bootstrap support for L0PF72 as seed ortholog is 100%.

Group of orthologs #184. Best score 267 bits
Score difference with first non-orthologous sequence - C.hominis:267 P.jiroveci:267

Q5CEL7              	100.00%		L0PCR2              	100.00%
Bootstrap support for Q5CEL7 as seed ortholog is 100%.
Bootstrap support for L0PCR2 as seed ortholog is 100%.

Group of orthologs #185. Best score 267 bits
Score difference with first non-orthologous sequence - C.hominis:267 P.jiroveci:267

Q5CNU7              	100.00%		L0PCK3              	100.00%
Bootstrap support for Q5CNU7 as seed ortholog is 100%.
Bootstrap support for L0PCK3 as seed ortholog is 100%.

Group of orthologs #186. Best score 265 bits
Score difference with first non-orthologous sequence - C.hominis:265 P.jiroveci:265

Q5CFC7              	100.00%		L0PFI8              	100.00%
Bootstrap support for Q5CFC7 as seed ortholog is 100%.
Bootstrap support for L0PFI8 as seed ortholog is 100%.

Group of orthologs #187. Best score 264 bits
Score difference with first non-orthologous sequence - C.hominis:264 P.jiroveci:264

Q5CH15              	100.00%		L0PA42              	100.00%
Bootstrap support for Q5CH15 as seed ortholog is 100%.
Bootstrap support for L0PA42 as seed ortholog is 100%.

Group of orthologs #188. Best score 262 bits
Score difference with first non-orthologous sequence - C.hominis:262 P.jiroveci:262

Q5CL53              	100.00%		L0PCR5              	100.00%
                    	       		L0P9C2              	62.85%
Bootstrap support for Q5CL53 as seed ortholog is 100%.
Bootstrap support for L0PCR5 as seed ortholog is 100%.

Group of orthologs #189. Best score 261 bits
Score difference with first non-orthologous sequence - C.hominis:261 P.jiroveci:261

Q5CJZ0              	100.00%		L0PE52              	100.00%
                    	       		L0PIN5              	53.23%
Bootstrap support for Q5CJZ0 as seed ortholog is 100%.
Bootstrap support for L0PE52 as seed ortholog is 100%.

Group of orthologs #190. Best score 260 bits
Score difference with first non-orthologous sequence - C.hominis:260 P.jiroveci:260

Q5CH60              	100.00%		L0P9A8              	100.00%
                    	       		L0PHB9              	81.39%
Bootstrap support for Q5CH60 as seed ortholog is 100%.
Bootstrap support for L0P9A8 as seed ortholog is 100%.

Group of orthologs #191. Best score 259 bits
Score difference with first non-orthologous sequence - C.hominis:166 P.jiroveci:259

Q5CEE7              	100.00%		L0P9I8              	100.00%
Bootstrap support for Q5CEE7 as seed ortholog is 99%.
Bootstrap support for L0P9I8 as seed ortholog is 100%.

Group of orthologs #192. Best score 258 bits
Score difference with first non-orthologous sequence - C.hominis:258 P.jiroveci:258

Q5CK79              	100.00%		L0PFY3              	100.00%
Bootstrap support for Q5CK79 as seed ortholog is 100%.
Bootstrap support for L0PFY3 as seed ortholog is 100%.

Group of orthologs #193. Best score 257 bits
Score difference with first non-orthologous sequence - C.hominis:257 P.jiroveci:257

Q5CL75              	100.00%		L0PG82              	100.00%
Bootstrap support for Q5CL75 as seed ortholog is 100%.
Bootstrap support for L0PG82 as seed ortholog is 100%.

Group of orthologs #194. Best score 255 bits
Score difference with first non-orthologous sequence - C.hominis:206 P.jiroveci:193

Q5CKZ2              	100.00%		L0PD17              	100.00%
Bootstrap support for Q5CKZ2 as seed ortholog is 100%.
Bootstrap support for L0PD17 as seed ortholog is 100%.

Group of orthologs #195. Best score 252 bits
Score difference with first non-orthologous sequence - C.hominis:252 P.jiroveci:154

Q5CEI7              	100.00%		L0PFU1              	100.00%
Bootstrap support for Q5CEI7 as seed ortholog is 100%.
Bootstrap support for L0PFU1 as seed ortholog is 100%.

Group of orthologs #196. Best score 250 bits
Score difference with first non-orthologous sequence - C.hominis:176 P.jiroveci:12

Q5CJ45              	100.00%		L0P9E4              	100.00%
Q5CIZ1              	63.33%		
Bootstrap support for Q5CJ45 as seed ortholog is 100%.
Bootstrap support for L0P9E4 as seed ortholog is 71%.
Alternative seed ortholog is L0PC59 (12 bits away from this cluster)

Group of orthologs #197. Best score 250 bits
Score difference with first non-orthologous sequence - C.hominis:250 P.jiroveci:121

Q5CJ42              	100.00%		L0PDB7              	100.00%
Bootstrap support for Q5CJ42 as seed ortholog is 100%.
Bootstrap support for L0PDB7 as seed ortholog is 99%.

Group of orthologs #198. Best score 248 bits
Score difference with first non-orthologous sequence - C.hominis:248 P.jiroveci:248

Q5CJT0              	100.00%		L0P891              	100.00%
Bootstrap support for Q5CJT0 as seed ortholog is 100%.
Bootstrap support for L0P891 as seed ortholog is 100%.

Group of orthologs #199. Best score 245 bits
Score difference with first non-orthologous sequence - C.hominis:245 P.jiroveci:245

Q5CJN6              	100.00%		L0PAR8              	100.00%
Bootstrap support for Q5CJN6 as seed ortholog is 100%.
Bootstrap support for L0PAR8 as seed ortholog is 100%.

Group of orthologs #200. Best score 244 bits
Score difference with first non-orthologous sequence - C.hominis:244 P.jiroveci:244

Q5CNW6              	100.00%		L0P9X7              	100.00%
Bootstrap support for Q5CNW6 as seed ortholog is 100%.
Bootstrap support for L0P9X7 as seed ortholog is 100%.

Group of orthologs #201. Best score 243 bits
Score difference with first non-orthologous sequence - C.hominis:243 P.jiroveci:243

Q5CLE3              	100.00%		L0PHI3              	100.00%
Bootstrap support for Q5CLE3 as seed ortholog is 100%.
Bootstrap support for L0PHI3 as seed ortholog is 100%.

Group of orthologs #202. Best score 242 bits
Score difference with first non-orthologous sequence - C.hominis:242 P.jiroveci:96

Q5CHS1              	100.00%		L0PD82              	100.00%
                    	       		L0P6Q8              	24.01%
Bootstrap support for Q5CHS1 as seed ortholog is 100%.
Bootstrap support for L0PD82 as seed ortholog is 98%.

Group of orthologs #203. Best score 242 bits
Score difference with first non-orthologous sequence - C.hominis:174 P.jiroveci:242

Q5CL05              	100.00%		L0P9S5              	100.00%
Bootstrap support for Q5CL05 as seed ortholog is 100%.
Bootstrap support for L0P9S5 as seed ortholog is 100%.

Group of orthologs #204. Best score 242 bits
Score difference with first non-orthologous sequence - C.hominis:242 P.jiroveci:242

Q5CP83              	100.00%		L0P9C9              	100.00%
Bootstrap support for Q5CP83 as seed ortholog is 100%.
Bootstrap support for L0P9C9 as seed ortholog is 100%.

Group of orthologs #205. Best score 241 bits
Score difference with first non-orthologous sequence - C.hominis:241 P.jiroveci:241

Q5CGJ5              	100.00%		L0PBC5              	100.00%
Bootstrap support for Q5CGJ5 as seed ortholog is 100%.
Bootstrap support for L0PBC5 as seed ortholog is 100%.

Group of orthologs #206. Best score 241 bits
Score difference with first non-orthologous sequence - C.hominis:241 P.jiroveci:241

Q5CLW1              	100.00%		L0P8X1              	100.00%
Bootstrap support for Q5CLW1 as seed ortholog is 100%.
Bootstrap support for L0P8X1 as seed ortholog is 100%.

Group of orthologs #207. Best score 241 bits
Score difference with first non-orthologous sequence - C.hominis:241 P.jiroveci:241

Q5CLC3              	100.00%		L0PAM2              	100.00%
Bootstrap support for Q5CLC3 as seed ortholog is 100%.
Bootstrap support for L0PAM2 as seed ortholog is 100%.

Group of orthologs #208. Best score 240 bits
Score difference with first non-orthologous sequence - C.hominis:240 P.jiroveci:240

Q5CNH6              	100.00%		L0P9P0              	100.00%
Bootstrap support for Q5CNH6 as seed ortholog is 100%.
Bootstrap support for L0P9P0 as seed ortholog is 100%.

Group of orthologs #209. Best score 240 bits
Score difference with first non-orthologous sequence - C.hominis:144 P.jiroveci:240

Q5CNB1              	100.00%		L0PBQ9              	100.00%
Bootstrap support for Q5CNB1 as seed ortholog is 100%.
Bootstrap support for L0PBQ9 as seed ortholog is 100%.

Group of orthologs #210. Best score 238 bits
Score difference with first non-orthologous sequence - C.hominis:238 P.jiroveci:238

Q5CEV5              	100.00%		L0PG22              	100.00%
                    	       		L0PB04              	75.34%
Bootstrap support for Q5CEV5 as seed ortholog is 100%.
Bootstrap support for L0PG22 as seed ortholog is 100%.

Group of orthologs #211. Best score 238 bits
Score difference with first non-orthologous sequence - C.hominis:238 P.jiroveci:238

Q5CHE4              	100.00%		L0PIR9              	100.00%
Bootstrap support for Q5CHE4 as seed ortholog is 100%.
Bootstrap support for L0PIR9 as seed ortholog is 100%.

Group of orthologs #212. Best score 237 bits
Score difference with first non-orthologous sequence - C.hominis:237 P.jiroveci:145

Q5CJF2              	100.00%		L0PDL9              	100.00%
Bootstrap support for Q5CJF2 as seed ortholog is 100%.
Bootstrap support for L0PDL9 as seed ortholog is 99%.

Group of orthologs #213. Best score 237 bits
Score difference with first non-orthologous sequence - C.hominis:237 P.jiroveci:237

Q5CM34              	100.00%		L0PE41              	100.00%
Bootstrap support for Q5CM34 as seed ortholog is 100%.
Bootstrap support for L0PE41 as seed ortholog is 100%.

Group of orthologs #214. Best score 236 bits
Score difference with first non-orthologous sequence - C.hominis:93 P.jiroveci:77

Q5CL10              	100.00%		L0PBM6              	100.00%
Bootstrap support for Q5CL10 as seed ortholog is 93%.
Bootstrap support for L0PBM6 as seed ortholog is 94%.

Group of orthologs #215. Best score 236 bits
Score difference with first non-orthologous sequence - C.hominis:236 P.jiroveci:29

Q5CKW7              	100.00%		L0PG96              	100.00%
Bootstrap support for Q5CKW7 as seed ortholog is 100%.
Bootstrap support for L0PG96 as seed ortholog is 78%.

Group of orthologs #216. Best score 235 bits
Score difference with first non-orthologous sequence - C.hominis:56 P.jiroveci:235

Q5CFH3              	100.00%		L0P992              	100.00%
Bootstrap support for Q5CFH3 as seed ortholog is 89%.
Bootstrap support for L0P992 as seed ortholog is 100%.

Group of orthologs #217. Best score 235 bits
Score difference with first non-orthologous sequence - C.hominis:235 P.jiroveci:235

Q5CP73              	100.00%		L0PEV9              	100.00%
Bootstrap support for Q5CP73 as seed ortholog is 100%.
Bootstrap support for L0PEV9 as seed ortholog is 100%.

Group of orthologs #218. Best score 234 bits
Score difference with first non-orthologous sequence - C.hominis:99 P.jiroveci:143

Q5CMW0              	100.00%		L0PC98              	100.00%
Bootstrap support for Q5CMW0 as seed ortholog is 98%.
Bootstrap support for L0PC98 as seed ortholog is 99%.

Group of orthologs #219. Best score 233 bits
Score difference with first non-orthologous sequence - C.hominis:90 P.jiroveci:233

Q5CF20              	100.00%		L0PGR0              	100.00%
Q5CEC3              	13.25%		
Bootstrap support for Q5CF20 as seed ortholog is 96%.
Bootstrap support for L0PGR0 as seed ortholog is 100%.

Group of orthologs #220. Best score 233 bits
Score difference with first non-orthologous sequence - C.hominis:161 P.jiroveci:233

Q5CL45              	100.00%		L0PFY2              	100.00%
Bootstrap support for Q5CL45 as seed ortholog is 99%.
Bootstrap support for L0PFY2 as seed ortholog is 100%.

Group of orthologs #221. Best score 232 bits
Score difference with first non-orthologous sequence - C.hominis:232 P.jiroveci:232

Q5CKZ0              	100.00%		L0PET2              	100.00%
                    	       		L0PAE5              	85.71%
Bootstrap support for Q5CKZ0 as seed ortholog is 100%.
Bootstrap support for L0PET2 as seed ortholog is 100%.

Group of orthologs #222. Best score 232 bits
Score difference with first non-orthologous sequence - C.hominis:94 P.jiroveci:141

Q5CKL2              	100.00%		L0P8B4              	100.00%
Bootstrap support for Q5CKL2 as seed ortholog is 98%.
Bootstrap support for L0P8B4 as seed ortholog is 99%.

Group of orthologs #223. Best score 231 bits
Score difference with first non-orthologous sequence - C.hominis:231 P.jiroveci:231

Q5CKB3              	100.00%		L0P9W3              	100.00%
Bootstrap support for Q5CKB3 as seed ortholog is 100%.
Bootstrap support for L0P9W3 as seed ortholog is 100%.

Group of orthologs #224. Best score 229 bits
Score difference with first non-orthologous sequence - C.hominis:116 P.jiroveci:229

Q5CNX4              	100.00%		L0PBY3              	100.00%
Bootstrap support for Q5CNX4 as seed ortholog is 99%.
Bootstrap support for L0PBY3 as seed ortholog is 100%.

Group of orthologs #225. Best score 228 bits
Score difference with first non-orthologous sequence - C.hominis:178 P.jiroveci:167

Q5CDK7              	100.00%		L0P9F6              	100.00%
Bootstrap support for Q5CDK7 as seed ortholog is 100%.
Bootstrap support for L0P9F6 as seed ortholog is 100%.

Group of orthologs #226. Best score 226 bits
Score difference with first non-orthologous sequence - C.hominis:18 P.jiroveci:92

Q5CNM2              	100.00%		L0PB67              	100.00%
Bootstrap support for Q5CNM2 as seed ortholog is 60%.
Alternative seed ortholog is Q5CHH5 (18 bits away from this cluster)
Bootstrap support for L0PB67 as seed ortholog is 99%.

Group of orthologs #227. Best score 225 bits
Score difference with first non-orthologous sequence - C.hominis:24 P.jiroveci:113

Q5CGN2              	100.00%		L0P7A7              	100.00%
Bootstrap support for Q5CGN2 as seed ortholog is 76%.
Bootstrap support for L0P7A7 as seed ortholog is 98%.

Group of orthologs #228. Best score 224 bits
Score difference with first non-orthologous sequence - C.hominis:224 P.jiroveci:224

Q5CMF9              	100.00%		L0PF73              	100.00%
Bootstrap support for Q5CMF9 as seed ortholog is 100%.
Bootstrap support for L0PF73 as seed ortholog is 100%.

Group of orthologs #229. Best score 223 bits
Score difference with first non-orthologous sequence - C.hominis:223 P.jiroveci:223

Q5CHE6              	100.00%		L0PBM5              	100.00%
Bootstrap support for Q5CHE6 as seed ortholog is 100%.
Bootstrap support for L0PBM5 as seed ortholog is 100%.

Group of orthologs #230. Best score 223 bits
Score difference with first non-orthologous sequence - C.hominis:223 P.jiroveci:119

Q5CKM1              	100.00%		L0P8L5              	100.00%
Bootstrap support for Q5CKM1 as seed ortholog is 100%.
Bootstrap support for L0P8L5 as seed ortholog is 99%.

Group of orthologs #231. Best score 223 bits
Score difference with first non-orthologous sequence - C.hominis:223 P.jiroveci:130

Q5CK49              	100.00%		L0PBW7              	100.00%
Bootstrap support for Q5CK49 as seed ortholog is 100%.
Bootstrap support for L0PBW7 as seed ortholog is 99%.

Group of orthologs #232. Best score 223 bits
Score difference with first non-orthologous sequence - C.hominis:223 P.jiroveci:128

Q5CL26              	100.00%		L0PB03              	100.00%
Bootstrap support for Q5CL26 as seed ortholog is 100%.
Bootstrap support for L0PB03 as seed ortholog is 99%.

Group of orthologs #233. Best score 222 bits
Score difference with first non-orthologous sequence - C.hominis:222 P.jiroveci:222

Q5CJC5              	100.00%		L0PBM4              	100.00%
Bootstrap support for Q5CJC5 as seed ortholog is 100%.
Bootstrap support for L0PBM4 as seed ortholog is 100%.

Group of orthologs #234. Best score 221 bits
Score difference with first non-orthologous sequence - C.hominis:221 P.jiroveci:221

Q5CEQ2              	100.00%		L0P7L7              	100.00%
Bootstrap support for Q5CEQ2 as seed ortholog is 100%.
Bootstrap support for L0P7L7 as seed ortholog is 100%.

Group of orthologs #235. Best score 221 bits
Score difference with first non-orthologous sequence - C.hominis:221 P.jiroveci:221

Q5CGT4              	100.00%		L0PC90              	100.00%
Bootstrap support for Q5CGT4 as seed ortholog is 100%.
Bootstrap support for L0PC90 as seed ortholog is 100%.

Group of orthologs #236. Best score 221 bits
Score difference with first non-orthologous sequence - C.hominis:221 P.jiroveci:221

Q5CM21              	100.00%		L0PD41              	100.00%
Bootstrap support for Q5CM21 as seed ortholog is 100%.
Bootstrap support for L0PD41 as seed ortholog is 100%.

Group of orthologs #237. Best score 221 bits
Score difference with first non-orthologous sequence - C.hominis:108 P.jiroveci:221

Q5CPA2              	100.00%		L0PGH8              	100.00%
Bootstrap support for Q5CPA2 as seed ortholog is 98%.
Bootstrap support for L0PGH8 as seed ortholog is 100%.

Group of orthologs #238. Best score 220 bits
Score difference with first non-orthologous sequence - C.hominis:220 P.jiroveci:220

Q5CH91              	100.00%		L0PCV8              	100.00%
Bootstrap support for Q5CH91 as seed ortholog is 100%.
Bootstrap support for L0PCV8 as seed ortholog is 100%.

Group of orthologs #239. Best score 218 bits
Score difference with first non-orthologous sequence - C.hominis:218 P.jiroveci:140

Q5CHG0              	100.00%		L0PE17              	100.00%
Bootstrap support for Q5CHG0 as seed ortholog is 100%.
Bootstrap support for L0PE17 as seed ortholog is 99%.

Group of orthologs #240. Best score 218 bits
Score difference with first non-orthologous sequence - C.hominis:218 P.jiroveci:218

Q5CP98              	100.00%		L0P9B8              	100.00%
Bootstrap support for Q5CP98 as seed ortholog is 100%.
Bootstrap support for L0P9B8 as seed ortholog is 100%.

Group of orthologs #241. Best score 217 bits
Score difference with first non-orthologous sequence - C.hominis:217 P.jiroveci:217

Q5CGI8              	100.00%		L0PBE9              	100.00%
Bootstrap support for Q5CGI8 as seed ortholog is 100%.
Bootstrap support for L0PBE9 as seed ortholog is 100%.

Group of orthologs #242. Best score 217 bits
Score difference with first non-orthologous sequence - C.hominis:217 P.jiroveci:114

Q5CKT0              	100.00%		L0PAL8              	100.00%
Bootstrap support for Q5CKT0 as seed ortholog is 100%.
Bootstrap support for L0PAL8 as seed ortholog is 99%.

Group of orthologs #243. Best score 217 bits
Score difference with first non-orthologous sequence - C.hominis:217 P.jiroveci:97

Q5CH50              	100.00%		L0PF08              	100.00%
Bootstrap support for Q5CH50 as seed ortholog is 100%.
Bootstrap support for L0PF08 as seed ortholog is 98%.

Group of orthologs #244. Best score 214 bits
Score difference with first non-orthologous sequence - C.hominis:214 P.jiroveci:214

Q5CEW7              	100.00%		L0PCJ2              	100.00%
Bootstrap support for Q5CEW7 as seed ortholog is 100%.
Bootstrap support for L0PCJ2 as seed ortholog is 100%.

Group of orthologs #245. Best score 214 bits
Score difference with first non-orthologous sequence - C.hominis:214 P.jiroveci:214

Q5CIB9              	100.00%		L0PAF9              	100.00%
Bootstrap support for Q5CIB9 as seed ortholog is 100%.
Bootstrap support for L0PAF9 as seed ortholog is 100%.

Group of orthologs #246. Best score 214 bits
Score difference with first non-orthologous sequence - C.hominis:214 P.jiroveci:214

Q5CMZ4              	100.00%		L0PHG7              	100.00%
Bootstrap support for Q5CMZ4 as seed ortholog is 100%.
Bootstrap support for L0PHG7 as seed ortholog is 100%.

Group of orthologs #247. Best score 212 bits
Score difference with first non-orthologous sequence - C.hominis:212 P.jiroveci:212

Q5CIY8              	100.00%		L0PCY9              	100.00%
Bootstrap support for Q5CIY8 as seed ortholog is 100%.
Bootstrap support for L0PCY9 as seed ortholog is 100%.

Group of orthologs #248. Best score 212 bits
Score difference with first non-orthologous sequence - C.hominis:212 P.jiroveci:35

Q5CMS0              	100.00%		L0PD43              	100.00%
Bootstrap support for Q5CMS0 as seed ortholog is 100%.
Bootstrap support for L0PD43 as seed ortholog is 85%.

Group of orthologs #249. Best score 211 bits
Score difference with first non-orthologous sequence - C.hominis:211 P.jiroveci:211

Q5CK50              	100.00%		L0PDT8              	100.00%
                    	       		L0P9R2              	91.18%
Bootstrap support for Q5CK50 as seed ortholog is 100%.
Bootstrap support for L0PDT8 as seed ortholog is 100%.

Group of orthologs #250. Best score 211 bits
Score difference with first non-orthologous sequence - C.hominis:120 P.jiroveci:211

Q5CEQ8              	100.00%		L0PFB1              	100.00%
Bootstrap support for Q5CEQ8 as seed ortholog is 99%.
Bootstrap support for L0PFB1 as seed ortholog is 100%.

Group of orthologs #251. Best score 211 bits
Score difference with first non-orthologous sequence - C.hominis:211 P.jiroveci:40

Q5CK06              	100.00%		L0PIP5              	100.00%
Bootstrap support for Q5CK06 as seed ortholog is 100%.
Bootstrap support for L0PIP5 as seed ortholog is 87%.

Group of orthologs #252. Best score 208 bits
Score difference with first non-orthologous sequence - C.hominis:27 P.jiroveci:115

Q5CMB7              	100.00%		L0PB10              	100.00%
Bootstrap support for Q5CMB7 as seed ortholog is 80%.
Bootstrap support for L0PB10 as seed ortholog is 99%.

Group of orthologs #253. Best score 208 bits
Score difference with first non-orthologous sequence - C.hominis:208 P.jiroveci:208

Q5CMY2              	100.00%		L0PD18              	100.00%
Bootstrap support for Q5CMY2 as seed ortholog is 100%.
Bootstrap support for L0PD18 as seed ortholog is 100%.

Group of orthologs #254. Best score 207 bits
Score difference with first non-orthologous sequence - C.hominis:134 P.jiroveci:207

Q5CGJ1              	100.00%		L0PCG0              	100.00%
Bootstrap support for Q5CGJ1 as seed ortholog is 100%.
Bootstrap support for L0PCG0 as seed ortholog is 100%.

Group of orthologs #255. Best score 207 bits
Score difference with first non-orthologous sequence - C.hominis:135 P.jiroveci:207

Q5CJR7              	100.00%		L0PA00              	100.00%
Bootstrap support for Q5CJR7 as seed ortholog is 99%.
Bootstrap support for L0PA00 as seed ortholog is 100%.

Group of orthologs #256. Best score 207 bits
Score difference with first non-orthologous sequence - C.hominis:207 P.jiroveci:207

Q5CM53              	100.00%		L0PD38              	100.00%
Bootstrap support for Q5CM53 as seed ortholog is 100%.
Bootstrap support for L0PD38 as seed ortholog is 100%.

Group of orthologs #257. Best score 206 bits
Score difference with first non-orthologous sequence - C.hominis:115 P.jiroveci:206

Q5CF41              	100.00%		L0PGD7              	100.00%
                    	       		L0PGQ0              	66.38%
Bootstrap support for Q5CF41 as seed ortholog is 99%.
Bootstrap support for L0PGD7 as seed ortholog is 100%.

Group of orthologs #258. Best score 206 bits
Score difference with first non-orthologous sequence - C.hominis:206 P.jiroveci:206

Q5CHK2              	100.00%		L0P9J7              	100.00%
Bootstrap support for Q5CHK2 as seed ortholog is 100%.
Bootstrap support for L0P9J7 as seed ortholog is 100%.

Group of orthologs #259. Best score 206 bits
Score difference with first non-orthologous sequence - C.hominis:206 P.jiroveci:206

Q5CKA5              	100.00%		L0P9I6              	100.00%
Bootstrap support for Q5CKA5 as seed ortholog is 100%.
Bootstrap support for L0P9I6 as seed ortholog is 100%.

Group of orthologs #260. Best score 206 bits
Score difference with first non-orthologous sequence - C.hominis:206 P.jiroveci:206

Q5CL62              	100.00%		L0P8K8              	100.00%
Bootstrap support for Q5CL62 as seed ortholog is 100%.
Bootstrap support for L0P8K8 as seed ortholog is 100%.

Group of orthologs #261. Best score 205 bits
Score difference with first non-orthologous sequence - C.hominis:205 P.jiroveci:205

Q5CN63              	100.00%		L0PGV8              	100.00%
Bootstrap support for Q5CN63 as seed ortholog is 100%.
Bootstrap support for L0PGV8 as seed ortholog is 100%.

Group of orthologs #262. Best score 204 bits
Score difference with first non-orthologous sequence - C.hominis:204 P.jiroveci:204

Q5CH92              	100.00%		L0P7H2              	100.00%
Bootstrap support for Q5CH92 as seed ortholog is 100%.
Bootstrap support for L0P7H2 as seed ortholog is 100%.

Group of orthologs #263. Best score 204 bits
Score difference with first non-orthologous sequence - C.hominis:204 P.jiroveci:204

Q5CI24              	100.00%		L0PBX0              	100.00%
Bootstrap support for Q5CI24 as seed ortholog is 100%.
Bootstrap support for L0PBX0 as seed ortholog is 100%.

Group of orthologs #264. Best score 204 bits
Score difference with first non-orthologous sequence - C.hominis:204 P.jiroveci:204

Q5CKR8              	100.00%		L0PBS5              	100.00%
Bootstrap support for Q5CKR8 as seed ortholog is 100%.
Bootstrap support for L0PBS5 as seed ortholog is 100%.

Group of orthologs #265. Best score 204 bits
Score difference with first non-orthologous sequence - C.hominis:204 P.jiroveci:204

Q5CNF4              	100.00%		L0PES3              	100.00%
Bootstrap support for Q5CNF4 as seed ortholog is 100%.
Bootstrap support for L0PES3 as seed ortholog is 100%.

Group of orthologs #266. Best score 203 bits
Score difference with first non-orthologous sequence - C.hominis:203 P.jiroveci:203

Q5CI27              	100.00%		L0PAC7              	100.00%
Bootstrap support for Q5CI27 as seed ortholog is 100%.
Bootstrap support for L0PAC7 as seed ortholog is 100%.

Group of orthologs #267. Best score 203 bits
Score difference with first non-orthologous sequence - C.hominis:203 P.jiroveci:203

Q5CJ75              	100.00%		L0PCU0              	100.00%
Bootstrap support for Q5CJ75 as seed ortholog is 100%.
Bootstrap support for L0PCU0 as seed ortholog is 100%.

Group of orthologs #268. Best score 203 bits
Score difference with first non-orthologous sequence - C.hominis:203 P.jiroveci:203

Q5CMQ7              	100.00%		L0PC53              	100.00%
Bootstrap support for Q5CMQ7 as seed ortholog is 100%.
Bootstrap support for L0PC53 as seed ortholog is 100%.

Group of orthologs #269. Best score 203 bits
Score difference with first non-orthologous sequence - C.hominis:203 P.jiroveci:203

Q5CMS2              	100.00%		L0PFF9              	100.00%
Bootstrap support for Q5CMS2 as seed ortholog is 100%.
Bootstrap support for L0PFF9 as seed ortholog is 100%.

Group of orthologs #270. Best score 201 bits
Score difference with first non-orthologous sequence - C.hominis:201 P.jiroveci:201

Q5CIV2              	100.00%		L0PBY2              	100.00%
Bootstrap support for Q5CIV2 as seed ortholog is 100%.
Bootstrap support for L0PBY2 as seed ortholog is 100%.

Group of orthologs #271. Best score 200 bits
Score difference with first non-orthologous sequence - C.hominis:81 P.jiroveci:98

Q5CL58              	100.00%		L0P876              	100.00%
Bootstrap support for Q5CL58 as seed ortholog is 99%.
Bootstrap support for L0P876 as seed ortholog is 99%.

Group of orthologs #272. Best score 200 bits
Score difference with first non-orthologous sequence - C.hominis:200 P.jiroveci:200

Q5CEV4              	100.00%		L0PH55              	100.00%
Bootstrap support for Q5CEV4 as seed ortholog is 100%.
Bootstrap support for L0PH55 as seed ortholog is 100%.

Group of orthologs #273. Best score 200 bits
Score difference with first non-orthologous sequence - C.hominis:200 P.jiroveci:200

Q5CLH9              	100.00%		L0PCY0              	100.00%
Bootstrap support for Q5CLH9 as seed ortholog is 100%.
Bootstrap support for L0PCY0 as seed ortholog is 100%.

Group of orthologs #274. Best score 200 bits
Score difference with first non-orthologous sequence - C.hominis:200 P.jiroveci:200

Q5CP76              	100.00%		L0PFL8              	100.00%
Bootstrap support for Q5CP76 as seed ortholog is 100%.
Bootstrap support for L0PFL8 as seed ortholog is 100%.

Group of orthologs #275. Best score 199 bits
Score difference with first non-orthologous sequence - C.hominis:140 P.jiroveci:25

Q5CMQ9              	100.00%		L0PHK8              	100.00%
Bootstrap support for Q5CMQ9 as seed ortholog is 99%.
Bootstrap support for L0PHK8 as seed ortholog is 73%.
Alternative seed ortholog is L0P8I1 (25 bits away from this cluster)

Group of orthologs #276. Best score 197 bits
Score difference with first non-orthologous sequence - C.hominis:146 P.jiroveci:197

Q5CLV2              	100.00%		L0P9V7              	100.00%
Bootstrap support for Q5CLV2 as seed ortholog is 98%.
Bootstrap support for L0P9V7 as seed ortholog is 100%.

Group of orthologs #277. Best score 197 bits
Score difference with first non-orthologous sequence - C.hominis:197 P.jiroveci:81

Q5CKS8              	100.00%		L0PFY7              	100.00%
Bootstrap support for Q5CKS8 as seed ortholog is 100%.
Bootstrap support for L0PFY7 as seed ortholog is 99%.

Group of orthologs #278. Best score 197 bits
Score difference with first non-orthologous sequence - C.hominis:108 P.jiroveci:90

Q5CLR8              	100.00%		L0PFN2              	100.00%
Bootstrap support for Q5CLR8 as seed ortholog is 100%.
Bootstrap support for L0PFN2 as seed ortholog is 100%.

Group of orthologs #279. Best score 197 bits
Score difference with first non-orthologous sequence - C.hominis:129 P.jiroveci:197

Q5CLY7              	100.00%		L0PHJ3              	100.00%
Bootstrap support for Q5CLY7 as seed ortholog is 100%.
Bootstrap support for L0PHJ3 as seed ortholog is 100%.

Group of orthologs #280. Best score 195 bits
Score difference with first non-orthologous sequence - C.hominis:195 P.jiroveci:195

Q5CKF8              	100.00%		L0PD26              	100.00%
                    	       		L0PD32              	99.01%
Bootstrap support for Q5CKF8 as seed ortholog is 100%.
Bootstrap support for L0PD26 as seed ortholog is 100%.

Group of orthologs #281. Best score 195 bits
Score difference with first non-orthologous sequence - C.hominis:195 P.jiroveci:57

Q5CEM7              	100.00%		L0PCH8              	100.00%
Bootstrap support for Q5CEM7 as seed ortholog is 100%.
Bootstrap support for L0PCH8 as seed ortholog is 97%.

Group of orthologs #282. Best score 195 bits
Score difference with first non-orthologous sequence - C.hominis:195 P.jiroveci:195

Q5CL06              	100.00%		L0PBZ6              	100.00%
Bootstrap support for Q5CL06 as seed ortholog is 100%.
Bootstrap support for L0PBZ6 as seed ortholog is 100%.

Group of orthologs #283. Best score 195 bits
Score difference with first non-orthologous sequence - C.hominis:195 P.jiroveci:195

Q5CKY0              	100.00%		L0PE58              	100.00%
Bootstrap support for Q5CKY0 as seed ortholog is 100%.
Bootstrap support for L0PE58 as seed ortholog is 100%.

Group of orthologs #284. Best score 194 bits
Score difference with first non-orthologous sequence - C.hominis:194 P.jiroveci:194

Q5CP48              	100.00%		L0PFN9              	100.00%
                    	       		L0PEF0              	33.62%
Bootstrap support for Q5CP48 as seed ortholog is 100%.
Bootstrap support for L0PFN9 as seed ortholog is 100%.

Group of orthologs #285. Best score 193 bits
Score difference with first non-orthologous sequence - C.hominis:193 P.jiroveci:193

Q5CJU3              	100.00%		L0PAS3              	100.00%
Bootstrap support for Q5CJU3 as seed ortholog is 100%.
Bootstrap support for L0PAS3 as seed ortholog is 100%.

Group of orthologs #286. Best score 191 bits
Score difference with first non-orthologous sequence - C.hominis:191 P.jiroveci:191

Q5CGJ0              	100.00%		L0PB66              	100.00%
Bootstrap support for Q5CGJ0 as seed ortholog is 100%.
Bootstrap support for L0PB66 as seed ortholog is 100%.

Group of orthologs #287. Best score 191 bits
Score difference with first non-orthologous sequence - C.hominis:191 P.jiroveci:113

Q5CGJ7              	100.00%		L0PEX1              	100.00%
Bootstrap support for Q5CGJ7 as seed ortholog is 100%.
Bootstrap support for L0PEX1 as seed ortholog is 99%.

Group of orthologs #288. Best score 191 bits
Score difference with first non-orthologous sequence - C.hominis:191 P.jiroveci:191

Q5CLV1              	100.00%		L0PGJ4              	100.00%
Bootstrap support for Q5CLV1 as seed ortholog is 100%.
Bootstrap support for L0PGJ4 as seed ortholog is 100%.

Group of orthologs #289. Best score 190 bits
Score difference with first non-orthologous sequence - C.hominis:190 P.jiroveci:190

Q5CP75              	100.00%		L0PCE9              	100.00%
                    	       		L0PBP3              	6.61%
                    	       		L0PBN5              	6.01%
Bootstrap support for Q5CP75 as seed ortholog is 100%.
Bootstrap support for L0PCE9 as seed ortholog is 100%.

Group of orthologs #290. Best score 190 bits
Score difference with first non-orthologous sequence - C.hominis:53 P.jiroveci:190

Q5CI95              	100.00%		L0P8A6              	100.00%
Bootstrap support for Q5CI95 as seed ortholog is 86%.
Bootstrap support for L0P8A6 as seed ortholog is 100%.

Group of orthologs #291. Best score 190 bits
Score difference with first non-orthologous sequence - C.hominis:190 P.jiroveci:190

Q5CLA7              	100.00%		L0P9G0              	100.00%
Bootstrap support for Q5CLA7 as seed ortholog is 100%.
Bootstrap support for L0P9G0 as seed ortholog is 100%.

Group of orthologs #292. Best score 190 bits
Score difference with first non-orthologous sequence - C.hominis:190 P.jiroveci:190

Q5CGZ1              	100.00%		L0PFJ6              	100.00%
Bootstrap support for Q5CGZ1 as seed ortholog is 100%.
Bootstrap support for L0PFJ6 as seed ortholog is 100%.

Group of orthologs #293. Best score 190 bits
Score difference with first non-orthologous sequence - C.hominis:123 P.jiroveci:190

Q5CKA6              	100.00%		L0PEM3              	100.00%
Bootstrap support for Q5CKA6 as seed ortholog is 99%.
Bootstrap support for L0PEM3 as seed ortholog is 100%.

Group of orthologs #294. Best score 190 bits
Score difference with first non-orthologous sequence - C.hominis:190 P.jiroveci:190

Q5CNW7              	100.00%		L0PF44              	100.00%
Bootstrap support for Q5CNW7 as seed ortholog is 100%.
Bootstrap support for L0PF44 as seed ortholog is 100%.

Group of orthologs #295. Best score 189 bits
Score difference with first non-orthologous sequence - C.hominis:49 P.jiroveci:9

Q5CJK3              	100.00%		L0PCN5              	100.00%
Q5CJ39              	39.57%		L0P7B6              	92.80%
Q5CHJ7              	17.99%		
Q5CNS4              	16.67%		
Q5CNK3              	16.19%		
Q5CHL8              	12.35%		
Q5CP93              	8.99%		
Bootstrap support for Q5CJK3 as seed ortholog is 90%.
Bootstrap support for L0PCN5 as seed ortholog is 59%.
Alternative seed ortholog is L0PDN2 (9 bits away from this cluster)

Group of orthologs #296. Best score 189 bits
Score difference with first non-orthologous sequence - C.hominis:189 P.jiroveci:189

Q5CIX5              	100.00%		L0PB84              	100.00%
Bootstrap support for Q5CIX5 as seed ortholog is 100%.
Bootstrap support for L0PB84 as seed ortholog is 100%.

Group of orthologs #297. Best score 188 bits
Score difference with first non-orthologous sequence - C.hominis:188 P.jiroveci:188

Q5CJR5              	100.00%		L0PBT9              	100.00%
                    	       		L0P9Y0              	50.41%
Bootstrap support for Q5CJR5 as seed ortholog is 100%.
Bootstrap support for L0PBT9 as seed ortholog is 100%.

Group of orthologs #298. Best score 188 bits
Score difference with first non-orthologous sequence - C.hominis:188 P.jiroveci:188

Q5CE71              	100.00%		L0PEN7              	100.00%
Bootstrap support for Q5CE71 as seed ortholog is 100%.
Bootstrap support for L0PEN7 as seed ortholog is 100%.

Group of orthologs #299. Best score 187 bits
Score difference with first non-orthologous sequence - C.hominis:187 P.jiroveci:187

Q5CHS4              	100.00%		L0P9G7              	100.00%
Bootstrap support for Q5CHS4 as seed ortholog is 100%.
Bootstrap support for L0P9G7 as seed ortholog is 100%.

Group of orthologs #300. Best score 187 bits
Score difference with first non-orthologous sequence - C.hominis:187 P.jiroveci:187

Q5CLN3              	100.00%		L0PCG4              	100.00%
Bootstrap support for Q5CLN3 as seed ortholog is 100%.
Bootstrap support for L0PCG4 as seed ortholog is 100%.

Group of orthologs #301. Best score 187 bits
Score difference with first non-orthologous sequence - C.hominis:139 P.jiroveci:68

Q5CN17              	100.00%		L0PGX9              	100.00%
Bootstrap support for Q5CN17 as seed ortholog is 99%.
Bootstrap support for L0PGX9 as seed ortholog is 96%.

Group of orthologs #302. Best score 186 bits
Score difference with first non-orthologous sequence - C.hominis:138 P.jiroveci:90

Q5CNR0              	100.00%		L0PA57              	100.00%
Bootstrap support for Q5CNR0 as seed ortholog is 99%.
Bootstrap support for L0PA57 as seed ortholog is 95%.

Group of orthologs #303. Best score 186 bits
Score difference with first non-orthologous sequence - C.hominis:186 P.jiroveci:186

Q5CKS1              	100.00%		L0PGQ4              	100.00%
Bootstrap support for Q5CKS1 as seed ortholog is 100%.
Bootstrap support for L0PGQ4 as seed ortholog is 100%.

Group of orthologs #304. Best score 185 bits
Score difference with first non-orthologous sequence - C.hominis:127 P.jiroveci:185

Q5CIX6              	100.00%		L0PAW4              	100.00%
Bootstrap support for Q5CIX6 as seed ortholog is 99%.
Bootstrap support for L0PAW4 as seed ortholog is 100%.

Group of orthologs #305. Best score 183 bits
Score difference with first non-orthologous sequence - C.hominis:183 P.jiroveci:183

Q5CEV2              	100.00%		L0P8N3              	100.00%
Bootstrap support for Q5CEV2 as seed ortholog is 100%.
Bootstrap support for L0P8N3 as seed ortholog is 100%.

Group of orthologs #306. Best score 183 bits
Score difference with first non-orthologous sequence - C.hominis:183 P.jiroveci:57

Q5CEU0              	100.00%		L0PCV1              	100.00%
Bootstrap support for Q5CEU0 as seed ortholog is 100%.
Bootstrap support for L0PCV1 as seed ortholog is 95%.

Group of orthologs #307. Best score 183 bits
Score difference with first non-orthologous sequence - C.hominis:183 P.jiroveci:183

Q5CJG7              	100.00%		L0P9K4              	100.00%
Bootstrap support for Q5CJG7 as seed ortholog is 100%.
Bootstrap support for L0P9K4 as seed ortholog is 100%.

Group of orthologs #308. Best score 183 bits
Score difference with first non-orthologous sequence - C.hominis:183 P.jiroveci:183

Q5CKB4              	100.00%		L0PH80              	100.00%
Bootstrap support for Q5CKB4 as seed ortholog is 100%.
Bootstrap support for L0PH80 as seed ortholog is 100%.

Group of orthologs #309. Best score 182 bits
Score difference with first non-orthologous sequence - C.hominis:182 P.jiroveci:182

Q5CNP4              	100.00%		L0P9Y2              	100.00%
Bootstrap support for Q5CNP4 as seed ortholog is 100%.
Bootstrap support for L0P9Y2 as seed ortholog is 100%.

Group of orthologs #310. Best score 182 bits
Score difference with first non-orthologous sequence - C.hominis:182 P.jiroveci:130

Q5CMA5              	100.00%		L0PD58              	100.00%
Bootstrap support for Q5CMA5 as seed ortholog is 100%.
Bootstrap support for L0PD58 as seed ortholog is 99%.

Group of orthologs #311. Best score 181 bits
Score difference with first non-orthologous sequence - C.hominis:181 P.jiroveci:114

Q5CFA7              	100.00%		L0PBB0              	100.00%
Bootstrap support for Q5CFA7 as seed ortholog is 100%.
Bootstrap support for L0PBB0 as seed ortholog is 99%.

Group of orthologs #312. Best score 181 bits
Score difference with first non-orthologous sequence - C.hominis:9 P.jiroveci:82

Q5CFB3              	100.00%		L0PDB8              	100.00%
Bootstrap support for Q5CFB3 as seed ortholog is 62%.
Alternative seed ortholog is Q5CLE8 (9 bits away from this cluster)
Bootstrap support for L0PDB8 as seed ortholog is 99%.

Group of orthologs #313. Best score 181 bits
Score difference with first non-orthologous sequence - C.hominis:181 P.jiroveci:181

Q5CNS8              	100.00%		L0P8V0              	100.00%
Bootstrap support for Q5CNS8 as seed ortholog is 100%.
Bootstrap support for L0P8V0 as seed ortholog is 100%.

Group of orthologs #314. Best score 180 bits
Score difference with first non-orthologous sequence - C.hominis:180 P.jiroveci:83

Q5CEK9              	100.00%		L0PAP9              	100.00%
Bootstrap support for Q5CEK9 as seed ortholog is 100%.
Bootstrap support for L0PAP9 as seed ortholog is 99%.

Group of orthologs #315. Best score 180 bits
Score difference with first non-orthologous sequence - C.hominis:180 P.jiroveci:180

Q5CI85              	100.00%		L0PDI7              	100.00%
Bootstrap support for Q5CI85 as seed ortholog is 100%.
Bootstrap support for L0PDI7 as seed ortholog is 100%.

Group of orthologs #316. Best score 180 bits
Score difference with first non-orthologous sequence - C.hominis:180 P.jiroveci:180

Q5CLD8              	100.00%		L0PAE8              	100.00%
Bootstrap support for Q5CLD8 as seed ortholog is 100%.
Bootstrap support for L0PAE8 as seed ortholog is 100%.

Group of orthologs #317. Best score 180 bits
Score difference with first non-orthologous sequence - C.hominis:180 P.jiroveci:53

Q5CH26              	100.00%		L0PG10              	100.00%
Bootstrap support for Q5CH26 as seed ortholog is 100%.
Bootstrap support for L0PG10 as seed ortholog is 93%.

Group of orthologs #318. Best score 179 bits
Score difference with first non-orthologous sequence - C.hominis:179 P.jiroveci:179

Q5CJA0              	100.00%		L0P9I3              	100.00%
Bootstrap support for Q5CJA0 as seed ortholog is 100%.
Bootstrap support for L0P9I3 as seed ortholog is 100%.

Group of orthologs #319. Best score 179 bits
Score difference with first non-orthologous sequence - C.hominis:74 P.jiroveci:85

Q5CKP5              	100.00%		L0PAS2              	100.00%
Bootstrap support for Q5CKP5 as seed ortholog is 99%.
Bootstrap support for L0PAS2 as seed ortholog is 99%.

Group of orthologs #320. Best score 179 bits
Score difference with first non-orthologous sequence - C.hominis:179 P.jiroveci:102

Q5CKA4              	100.00%		L0PGF2              	100.00%
Bootstrap support for Q5CKA4 as seed ortholog is 100%.
Bootstrap support for L0PGF2 as seed ortholog is 98%.

Group of orthologs #321. Best score 176 bits
Score difference with first non-orthologous sequence - C.hominis:176 P.jiroveci:176

Q5CJF6              	100.00%		L0PF79              	100.00%
Bootstrap support for Q5CJF6 as seed ortholog is 100%.
Bootstrap support for L0PF79 as seed ortholog is 100%.

Group of orthologs #322. Best score 175 bits
Score difference with first non-orthologous sequence - C.hominis:31 P.jiroveci:175

Q5CLN8              	100.00%		L0PCT4              	100.00%
Bootstrap support for Q5CLN8 as seed ortholog is 83%.
Bootstrap support for L0PCT4 as seed ortholog is 100%.

Group of orthologs #323. Best score 175 bits
Score difference with first non-orthologous sequence - C.hominis:175 P.jiroveci:175

Q5CLC9              	100.00%		L0PDW0              	100.00%
Bootstrap support for Q5CLC9 as seed ortholog is 100%.
Bootstrap support for L0PDW0 as seed ortholog is 100%.

Group of orthologs #324. Best score 175 bits
Score difference with first non-orthologous sequence - C.hominis:175 P.jiroveci:175

Q5CMQ5              	100.00%		L0PCQ7              	100.00%
Bootstrap support for Q5CMQ5 as seed ortholog is 100%.
Bootstrap support for L0PCQ7 as seed ortholog is 100%.

Group of orthologs #325. Best score 174 bits
Score difference with first non-orthologous sequence - C.hominis:73 P.jiroveci:75

Q5CGA7              	100.00%		L0PEX6              	100.00%
Q5CL03              	10.47%		
Bootstrap support for Q5CGA7 as seed ortholog is 99%.
Bootstrap support for L0PEX6 as seed ortholog is 99%.

Group of orthologs #326. Best score 174 bits
Score difference with first non-orthologous sequence - C.hominis:174 P.jiroveci:174

Q5CL82              	100.00%		L0P9I5              	100.00%
Bootstrap support for Q5CL82 as seed ortholog is 100%.
Bootstrap support for L0P9I5 as seed ortholog is 100%.

Group of orthologs #327. Best score 173 bits
Score difference with first non-orthologous sequence - C.hominis:173 P.jiroveci:173

Q5CIB1              	100.00%		L0P7Y5              	100.00%
Bootstrap support for Q5CIB1 as seed ortholog is 100%.
Bootstrap support for L0P7Y5 as seed ortholog is 100%.

Group of orthologs #328. Best score 173 bits
Score difference with first non-orthologous sequence - C.hominis:173 P.jiroveci:90

Q5CKP3              	100.00%		L0P9G1              	100.00%
Bootstrap support for Q5CKP3 as seed ortholog is 100%.
Bootstrap support for L0P9G1 as seed ortholog is 99%.

Group of orthologs #329. Best score 172 bits
Score difference with first non-orthologous sequence - C.hominis:172 P.jiroveci:172

Q5CKK9              	100.00%		L0PAY4              	100.00%
Bootstrap support for Q5CKK9 as seed ortholog is 100%.
Bootstrap support for L0PAY4 as seed ortholog is 100%.

Group of orthologs #330. Best score 171 bits
Score difference with first non-orthologous sequence - C.hominis:171 P.jiroveci:171

Q5CL48              	100.00%		L0PA72              	100.00%
Bootstrap support for Q5CL48 as seed ortholog is 100%.
Bootstrap support for L0PA72 as seed ortholog is 100%.

Group of orthologs #331. Best score 170 bits
Score difference with first non-orthologous sequence - C.hominis:170 P.jiroveci:170

Q5CJ72              	100.00%		L0P9S7              	100.00%
Bootstrap support for Q5CJ72 as seed ortholog is 100%.
Bootstrap support for L0P9S7 as seed ortholog is 100%.

Group of orthologs #332. Best score 169 bits
Score difference with first non-orthologous sequence - C.hominis:169 P.jiroveci:169

Q5CHH2              	100.00%		L0PEC6              	100.00%
Bootstrap support for Q5CHH2 as seed ortholog is 100%.
Bootstrap support for L0PEC6 as seed ortholog is 100%.

Group of orthologs #333. Best score 169 bits
Score difference with first non-orthologous sequence - C.hominis:169 P.jiroveci:169

Q5CM61              	100.00%		L0PAJ6              	100.00%
Bootstrap support for Q5CM61 as seed ortholog is 100%.
Bootstrap support for L0PAJ6 as seed ortholog is 100%.

Group of orthologs #334. Best score 168 bits
Score difference with first non-orthologous sequence - C.hominis:168 P.jiroveci:168

Q5CNE6              	100.00%		L0PGN1              	100.00%
Bootstrap support for Q5CNE6 as seed ortholog is 100%.
Bootstrap support for L0PGN1 as seed ortholog is 100%.

Group of orthologs #335. Best score 167 bits
Score difference with first non-orthologous sequence - C.hominis:167 P.jiroveci:167

Q5CJJ7              	100.00%		L0PCH0              	100.00%
Bootstrap support for Q5CJJ7 as seed ortholog is 100%.
Bootstrap support for L0PCH0 as seed ortholog is 100%.

Group of orthologs #336. Best score 166 bits
Score difference with first non-orthologous sequence - C.hominis:166 P.jiroveci:166

Q5CLJ2              	100.00%		L0PHC2              	100.00%
                    	       		L0P930              	66.52%
Bootstrap support for Q5CLJ2 as seed ortholog is 100%.
Bootstrap support for L0PHC2 as seed ortholog is 100%.

Group of orthologs #337. Best score 166 bits
Score difference with first non-orthologous sequence - C.hominis:166 P.jiroveci:166

Q5CEU5              	100.00%		L0PDL6              	100.00%
Bootstrap support for Q5CEU5 as seed ortholog is 100%.
Bootstrap support for L0PDL6 as seed ortholog is 100%.

Group of orthologs #338. Best score 166 bits
Score difference with first non-orthologous sequence - C.hominis:166 P.jiroveci:166

Q5CP35              	100.00%		L0PC68              	100.00%
Bootstrap support for Q5CP35 as seed ortholog is 100%.
Bootstrap support for L0PC68 as seed ortholog is 100%.

Group of orthologs #339. Best score 165 bits
Score difference with first non-orthologous sequence - C.hominis:165 P.jiroveci:108

Q5CNA1              	100.00%		L0PFS8              	100.00%
Bootstrap support for Q5CNA1 as seed ortholog is 100%.
Bootstrap support for L0PFS8 as seed ortholog is 99%.

Group of orthologs #340. Best score 165 bits
Score difference with first non-orthologous sequence - C.hominis:165 P.jiroveci:165

Q5CNV4              	100.00%		L0PGY0              	100.00%
Bootstrap support for Q5CNV4 as seed ortholog is 100%.
Bootstrap support for L0PGY0 as seed ortholog is 100%.

Group of orthologs #341. Best score 164 bits
Score difference with first non-orthologous sequence - C.hominis:106 P.jiroveci:164

Q5CNZ1              	100.00%		L0PGE3              	100.00%
                    	       		L0PEY7              	55.23%
Bootstrap support for Q5CNZ1 as seed ortholog is 99%.
Bootstrap support for L0PGE3 as seed ortholog is 100%.

Group of orthologs #342. Best score 164 bits
Score difference with first non-orthologous sequence - C.hominis:164 P.jiroveci:164

Q5CHH3              	100.00%		L0PC61              	100.00%
Bootstrap support for Q5CHH3 as seed ortholog is 100%.
Bootstrap support for L0PC61 as seed ortholog is 100%.

Group of orthologs #343. Best score 164 bits
Score difference with first non-orthologous sequence - C.hominis:68 P.jiroveci:28

Q5CGG5              	100.00%		L0PGT3              	100.00%
Bootstrap support for Q5CGG5 as seed ortholog is 99%.
Bootstrap support for L0PGT3 as seed ortholog is 95%.

Group of orthologs #344. Best score 164 bits
Score difference with first non-orthologous sequence - C.hominis:164 P.jiroveci:88

Q5CK67              	100.00%		L0PGN9              	100.00%
Bootstrap support for Q5CK67 as seed ortholog is 100%.
Bootstrap support for L0PGN9 as seed ortholog is 99%.

Group of orthologs #345. Best score 163 bits
Score difference with first non-orthologous sequence - C.hominis:163 P.jiroveci:163

Q5CGN0              	100.00%		L0P8J2              	100.00%
Bootstrap support for Q5CGN0 as seed ortholog is 100%.
Bootstrap support for L0P8J2 as seed ortholog is 100%.

Group of orthologs #346. Best score 163 bits
Score difference with first non-orthologous sequence - C.hominis:163 P.jiroveci:163

Q5CPB9              	100.00%		L0PAQ7              	100.00%
Bootstrap support for Q5CPB9 as seed ortholog is 100%.
Bootstrap support for L0PAQ7 as seed ortholog is 100%.

Group of orthologs #347. Best score 162 bits
Score difference with first non-orthologous sequence - C.hominis:162 P.jiroveci:162

Q5CKN6              	100.00%		L0PD65              	100.00%
Bootstrap support for Q5CKN6 as seed ortholog is 100%.
Bootstrap support for L0PD65 as seed ortholog is 100%.

Group of orthologs #348. Best score 160 bits
Score difference with first non-orthologous sequence - C.hominis:160 P.jiroveci:160

Q5CJU7              	100.00%		L0P8F0              	100.00%
Bootstrap support for Q5CJU7 as seed ortholog is 100%.
Bootstrap support for L0P8F0 as seed ortholog is 100%.

Group of orthologs #349. Best score 160 bits
Score difference with first non-orthologous sequence - C.hominis:160 P.jiroveci:160

Q5CNE7              	100.00%		L0PAC1              	100.00%
Bootstrap support for Q5CNE7 as seed ortholog is 100%.
Bootstrap support for L0PAC1 as seed ortholog is 100%.

Group of orthologs #350. Best score 160 bits
Score difference with first non-orthologous sequence - C.hominis:160 P.jiroveci:111

Q5CPC9              	100.00%		L0P9N5              	100.00%
Bootstrap support for Q5CPC9 as seed ortholog is 100%.
Bootstrap support for L0P9N5 as seed ortholog is 100%.

Group of orthologs #351. Best score 160 bits
Score difference with first non-orthologous sequence - C.hominis:64 P.jiroveci:160

Q5CNH1              	100.00%		L0PEQ4              	100.00%
Bootstrap support for Q5CNH1 as seed ortholog is 94%.
Bootstrap support for L0PEQ4 as seed ortholog is 100%.

Group of orthologs #352. Best score 159 bits
Score difference with first non-orthologous sequence - C.hominis:159 P.jiroveci:159

Q5CGE4              	100.00%		L0PCA8              	100.00%
Bootstrap support for Q5CGE4 as seed ortholog is 100%.
Bootstrap support for L0PCA8 as seed ortholog is 100%.

Group of orthologs #353. Best score 159 bits
Score difference with first non-orthologous sequence - C.hominis:159 P.jiroveci:159

Q5CLX1              	100.00%		L0PDJ6              	100.00%
Bootstrap support for Q5CLX1 as seed ortholog is 100%.
Bootstrap support for L0PDJ6 as seed ortholog is 100%.

Group of orthologs #354. Best score 159 bits
Score difference with first non-orthologous sequence - C.hominis:159 P.jiroveci:159

Q5CNS2              	100.00%		L0PBN7              	100.00%
Bootstrap support for Q5CNS2 as seed ortholog is 100%.
Bootstrap support for L0PBN7 as seed ortholog is 100%.

Group of orthologs #355. Best score 159 bits
Score difference with first non-orthologous sequence - C.hominis:159 P.jiroveci:159

Q5CP41              	100.00%		L0PGL6              	100.00%
Bootstrap support for Q5CP41 as seed ortholog is 100%.
Bootstrap support for L0PGL6 as seed ortholog is 100%.

Group of orthologs #356. Best score 158 bits
Score difference with first non-orthologous sequence - C.hominis:158 P.jiroveci:158

Q5CE95              	100.00%		L0PDC7              	100.00%
Bootstrap support for Q5CE95 as seed ortholog is 100%.
Bootstrap support for L0PDC7 as seed ortholog is 100%.

Group of orthologs #357. Best score 158 bits
Score difference with first non-orthologous sequence - C.hominis:158 P.jiroveci:158

Q5CFX6              	100.00%		L0PEX9              	100.00%
Bootstrap support for Q5CFX6 as seed ortholog is 100%.
Bootstrap support for L0PEX9 as seed ortholog is 100%.

Group of orthologs #358. Best score 158 bits
Score difference with first non-orthologous sequence - C.hominis:158 P.jiroveci:158

Q5CJI1              	100.00%		L0PBJ0              	100.00%
Bootstrap support for Q5CJI1 as seed ortholog is 100%.
Bootstrap support for L0PBJ0 as seed ortholog is 100%.

Group of orthologs #359. Best score 157 bits
Score difference with first non-orthologous sequence - C.hominis:157 P.jiroveci:157

Q5CNG8              	100.00%		L0PAJ2              	100.00%
Bootstrap support for Q5CNG8 as seed ortholog is 100%.
Bootstrap support for L0PAJ2 as seed ortholog is 100%.

Group of orthologs #360. Best score 156 bits
Score difference with first non-orthologous sequence - C.hominis:156 P.jiroveci:156

Q5CKI4              	100.00%		L0PG54              	100.00%
Bootstrap support for Q5CKI4 as seed ortholog is 100%.
Bootstrap support for L0PG54 as seed ortholog is 100%.

Group of orthologs #361. Best score 155 bits
Score difference with first non-orthologous sequence - C.hominis:77 P.jiroveci:79

Q5CFQ8              	100.00%		L0PCS6              	100.00%
Bootstrap support for Q5CFQ8 as seed ortholog is 95%.
Bootstrap support for L0PCS6 as seed ortholog is 98%.

Group of orthologs #362. Best score 155 bits
Score difference with first non-orthologous sequence - C.hominis:155 P.jiroveci:155

Q5CP89              	100.00%		L0PBI2              	100.00%
Bootstrap support for Q5CP89 as seed ortholog is 100%.
Bootstrap support for L0PBI2 as seed ortholog is 100%.

Group of orthologs #363. Best score 154 bits
Score difference with first non-orthologous sequence - C.hominis:154 P.jiroveci:154

Q5CHQ9              	100.00%		L0P9N4              	100.00%
Bootstrap support for Q5CHQ9 as seed ortholog is 100%.
Bootstrap support for L0P9N4 as seed ortholog is 100%.

Group of orthologs #364. Best score 152 bits
Score difference with first non-orthologous sequence - C.hominis:39 P.jiroveci:1

Q5CJT2              	100.00%		L0PCC3              	100.00%
Bootstrap support for Q5CJT2 as seed ortholog is 96%.
Bootstrap support for L0PCC3 as seed ortholog is 50%.
Alternative seed ortholog is L0PGP6 (1 bits away from this cluster)

Group of orthologs #365. Best score 151 bits
Score difference with first non-orthologous sequence - C.hominis:151 P.jiroveci:151

Q5CM74              	100.00%		L0P9S9              	100.00%
Q5CM42              	17.35%		L0PDT3              	42.58%
Bootstrap support for Q5CM74 as seed ortholog is 100%.
Bootstrap support for L0P9S9 as seed ortholog is 100%.

Group of orthologs #366. Best score 151 bits
Score difference with first non-orthologous sequence - C.hominis:151 P.jiroveci:151

Q5CLS3              	100.00%		L0P839              	100.00%
Bootstrap support for Q5CLS3 as seed ortholog is 100%.
Bootstrap support for L0P839 as seed ortholog is 100%.

Group of orthologs #367. Best score 151 bits
Score difference with first non-orthologous sequence - C.hominis:151 P.jiroveci:73

Q5CGT6              	100.00%		L0PEJ3              	100.00%
Bootstrap support for Q5CGT6 as seed ortholog is 100%.
Bootstrap support for L0PEJ3 as seed ortholog is 92%.

Group of orthologs #368. Best score 150 bits
Score difference with first non-orthologous sequence - C.hominis:150 P.jiroveci:70

Q5CJQ8              	100.00%		L0P871              	100.00%
                    	       		L0PAC4              	100.00%
Bootstrap support for Q5CJQ8 as seed ortholog is 100%.
Bootstrap support for L0P871 as seed ortholog is 99%.
Bootstrap support for L0PAC4 as seed ortholog is 99%.

Group of orthologs #369. Best score 150 bits
Score difference with first non-orthologous sequence - C.hominis:150 P.jiroveci:150

Q5CKP2              	100.00%		L0PG23              	100.00%
Bootstrap support for Q5CKP2 as seed ortholog is 100%.
Bootstrap support for L0PG23 as seed ortholog is 100%.

Group of orthologs #370. Best score 149 bits
Score difference with first non-orthologous sequence - C.hominis:149 P.jiroveci:149

Q5CHF0              	100.00%		L0PAE9              	100.00%
Bootstrap support for Q5CHF0 as seed ortholog is 100%.
Bootstrap support for L0PAE9 as seed ortholog is 100%.

Group of orthologs #371. Best score 149 bits
Score difference with first non-orthologous sequence - C.hominis:149 P.jiroveci:149

Q5CJA6              	100.00%		L0PC96              	100.00%
Bootstrap support for Q5CJA6 as seed ortholog is 100%.
Bootstrap support for L0PC96 as seed ortholog is 100%.

Group of orthologs #372. Best score 149 bits
Score difference with first non-orthologous sequence - C.hominis:149 P.jiroveci:87

Q5CMG0              	100.00%		L0PCY2              	100.00%
Bootstrap support for Q5CMG0 as seed ortholog is 100%.
Bootstrap support for L0PCY2 as seed ortholog is 99%.

Group of orthologs #373. Best score 148 bits
Score difference with first non-orthologous sequence - C.hominis:148 P.jiroveci:148

Q5CEE2              	100.00%		L0PFZ1              	100.00%
Bootstrap support for Q5CEE2 as seed ortholog is 100%.
Bootstrap support for L0PFZ1 as seed ortholog is 100%.

Group of orthologs #374. Best score 148 bits
Score difference with first non-orthologous sequence - C.hominis:148 P.jiroveci:148

Q5CN93              	100.00%		L0PCC1              	100.00%
Bootstrap support for Q5CN93 as seed ortholog is 100%.
Bootstrap support for L0PCC1 as seed ortholog is 100%.

Group of orthologs #375. Best score 148 bits
Score difference with first non-orthologous sequence - C.hominis:45 P.jiroveci:27

Q5CKV3              	100.00%		L0PFQ4              	100.00%
Bootstrap support for Q5CKV3 as seed ortholog is 97%.
Bootstrap support for L0PFQ4 as seed ortholog is 85%.

Group of orthologs #376. Best score 148 bits
Score difference with first non-orthologous sequence - C.hominis:148 P.jiroveci:148

Q5CMM3              	100.00%		L0PDW5              	100.00%
Bootstrap support for Q5CMM3 as seed ortholog is 100%.
Bootstrap support for L0PDW5 as seed ortholog is 100%.

Group of orthologs #377. Best score 146 bits
Score difference with first non-orthologous sequence - C.hominis:146 P.jiroveci:146

Q5CJA5              	100.00%		L0PGZ5              	100.00%
Bootstrap support for Q5CJA5 as seed ortholog is 100%.
Bootstrap support for L0PGZ5 as seed ortholog is 100%.

Group of orthologs #378. Best score 145 bits
Score difference with first non-orthologous sequence - C.hominis:145 P.jiroveci:145

Q5CFU3              	100.00%		L0PD35              	100.00%
Bootstrap support for Q5CFU3 as seed ortholog is 100%.
Bootstrap support for L0PD35 as seed ortholog is 100%.

Group of orthologs #379. Best score 144 bits
Score difference with first non-orthologous sequence - C.hominis:144 P.jiroveci:144

Q5CNJ9              	100.00%		L0P9U1              	100.00%
Bootstrap support for Q5CNJ9 as seed ortholog is 100%.
Bootstrap support for L0P9U1 as seed ortholog is 100%.

Group of orthologs #380. Best score 143 bits
Score difference with first non-orthologous sequence - C.hominis:9 P.jiroveci:143

Q5CIR4              	100.00%		L0PBR7              	100.00%
Bootstrap support for Q5CIR4 as seed ortholog is 87%.
Bootstrap support for L0PBR7 as seed ortholog is 100%.

Group of orthologs #381. Best score 143 bits
Score difference with first non-orthologous sequence - C.hominis:143 P.jiroveci:143

Q5CLZ8              	100.00%		L0PDQ3              	100.00%
Bootstrap support for Q5CLZ8 as seed ortholog is 100%.
Bootstrap support for L0PDQ3 as seed ortholog is 100%.

Group of orthologs #382. Best score 143 bits
Score difference with first non-orthologous sequence - C.hominis:143 P.jiroveci:143

Q5CP01              	100.00%		L0PES4              	100.00%
Bootstrap support for Q5CP01 as seed ortholog is 100%.
Bootstrap support for L0PES4 as seed ortholog is 100%.

Group of orthologs #383. Best score 142 bits
Score difference with first non-orthologous sequence - C.hominis:142 P.jiroveci:142

Q5CG49              	100.00%		L0P8Y0              	100.00%
Bootstrap support for Q5CG49 as seed ortholog is 100%.
Bootstrap support for L0P8Y0 as seed ortholog is 100%.

Group of orthologs #384. Best score 141 bits
Score difference with first non-orthologous sequence - C.hominis:141 P.jiroveci:141

Q5CNU6              	100.00%		L0P863              	100.00%
Bootstrap support for Q5CNU6 as seed ortholog is 100%.
Bootstrap support for L0P863 as seed ortholog is 100%.

Group of orthologs #385. Best score 141 bits
Score difference with first non-orthologous sequence - C.hominis:141 P.jiroveci:141

Q5CP58              	100.00%		L0PF92              	100.00%
Bootstrap support for Q5CP58 as seed ortholog is 100%.
Bootstrap support for L0PF92 as seed ortholog is 100%.

Group of orthologs #386. Best score 140 bits
Score difference with first non-orthologous sequence - C.hominis:13 P.jiroveci:6

Q5CEK2              	100.00%		L0P7L8              	100.00%
                    	       		L0P7X4              	9.04%
Bootstrap support for Q5CEK2 as seed ortholog is 60%.
Alternative seed ortholog is Q5CIV4 (13 bits away from this cluster)
Bootstrap support for L0P7L8 as seed ortholog is 53%.
Alternative seed ortholog is L0PFE7 (6 bits away from this cluster)

Group of orthologs #387. Best score 140 bits
Score difference with first non-orthologous sequence - C.hominis:140 P.jiroveci:140

Q5CJU9              	100.00%		L0PHK5              	100.00%
Bootstrap support for Q5CJU9 as seed ortholog is 100%.
Bootstrap support for L0PHK5 as seed ortholog is 100%.

Group of orthologs #388. Best score 139 bits
Score difference with first non-orthologous sequence - C.hominis:139 P.jiroveci:139

Q5CGN4              	100.00%		L0PG81              	100.00%
Bootstrap support for Q5CGN4 as seed ortholog is 100%.
Bootstrap support for L0PG81 as seed ortholog is 100%.

Group of orthologs #389. Best score 138 bits
Score difference with first non-orthologous sequence - C.hominis:138 P.jiroveci:138

Q5CH17              	100.00%		L0PB12              	100.00%
Bootstrap support for Q5CH17 as seed ortholog is 100%.
Bootstrap support for L0PB12 as seed ortholog is 100%.

Group of orthologs #390. Best score 138 bits
Score difference with first non-orthologous sequence - C.hominis:138 P.jiroveci:92

Q5CND0              	100.00%		L0PBM9              	100.00%
Bootstrap support for Q5CND0 as seed ortholog is 100%.
Bootstrap support for L0PBM9 as seed ortholog is 98%.

Group of orthologs #391. Best score 138 bits
Score difference with first non-orthologous sequence - C.hominis:73 P.jiroveci:82

Q5CKM0              	100.00%		L0PHN0              	100.00%
Bootstrap support for Q5CKM0 as seed ortholog is 96%.
Bootstrap support for L0PHN0 as seed ortholog is 98%.

Group of orthologs #392. Best score 137 bits
Score difference with first non-orthologous sequence - C.hominis:137 P.jiroveci:137

Q5CG85              	100.00%		L0PBT0              	100.00%
Bootstrap support for Q5CG85 as seed ortholog is 100%.
Bootstrap support for L0PBT0 as seed ortholog is 100%.

Group of orthologs #393. Best score 136 bits
Score difference with first non-orthologous sequence - C.hominis:136 P.jiroveci:136

Q5CMS5              	100.00%		L0PAT1              	100.00%
Bootstrap support for Q5CMS5 as seed ortholog is 100%.
Bootstrap support for L0PAT1 as seed ortholog is 100%.

Group of orthologs #394. Best score 136 bits
Score difference with first non-orthologous sequence - C.hominis:136 P.jiroveci:136

Q5CM08              	100.00%		L0PBP7              	100.00%
Bootstrap support for Q5CM08 as seed ortholog is 100%.
Bootstrap support for L0PBP7 as seed ortholog is 100%.

Group of orthologs #395. Best score 136 bits
Score difference with first non-orthologous sequence - C.hominis:136 P.jiroveci:136

Q5CLA5              	100.00%		L0PFC9              	100.00%
Bootstrap support for Q5CLA5 as seed ortholog is 100%.
Bootstrap support for L0PFC9 as seed ortholog is 100%.

Group of orthologs #396. Best score 136 bits
Score difference with first non-orthologous sequence - C.hominis:136 P.jiroveci:136

Q5CNA4              	100.00%		L0PH54              	100.00%
Bootstrap support for Q5CNA4 as seed ortholog is 100%.
Bootstrap support for L0PH54 as seed ortholog is 100%.

Group of orthologs #397. Best score 135 bits
Score difference with first non-orthologous sequence - C.hominis:135 P.jiroveci:135

Q5CKM5              	100.00%		L0P9R8              	100.00%
Bootstrap support for Q5CKM5 as seed ortholog is 100%.
Bootstrap support for L0P9R8 as seed ortholog is 100%.

Group of orthologs #398. Best score 135 bits
Score difference with first non-orthologous sequence - C.hominis:135 P.jiroveci:135

Q5CFE8              	100.00%		L0PFL0              	100.00%
Bootstrap support for Q5CFE8 as seed ortholog is 100%.
Bootstrap support for L0PFL0 as seed ortholog is 100%.

Group of orthologs #399. Best score 134 bits
Score difference with first non-orthologous sequence - C.hominis:1 P.jiroveci:10

Q5CK88              	100.00%		L0PCW4              	100.00%
                    	       		L0PFK8              	21.79%
Bootstrap support for Q5CK88 as seed ortholog is 48%.
Alternative seed ortholog is Q5CP15 (1 bits away from this cluster)
Bootstrap support for L0PCW4 as seed ortholog is 60%.
Alternative seed ortholog is L0PCJ7 (10 bits away from this cluster)

Group of orthologs #400. Best score 134 bits
Score difference with first non-orthologous sequence - C.hominis:42 P.jiroveci:134

Q5CIH5              	100.00%		L0PIJ3              	100.00%
                    	       		L0PEP1              	85.27%
Bootstrap support for Q5CIH5 as seed ortholog is 46%.
Alternative seed ortholog is Q5CNH3 (42 bits away from this cluster)
Bootstrap support for L0PIJ3 as seed ortholog is 100%.

Group of orthologs #401. Best score 133 bits
Score difference with first non-orthologous sequence - C.hominis:133 P.jiroveci:133

Q5CHR4              	100.00%		L0PEP5              	100.00%
                    	       		L0P720              	25.62%
Bootstrap support for Q5CHR4 as seed ortholog is 100%.
Bootstrap support for L0PEP5 as seed ortholog is 100%.

Group of orthologs #402. Best score 132 bits
Score difference with first non-orthologous sequence - C.hominis:132 P.jiroveci:132

Q5CHZ0              	100.00%		L0P8Q5              	100.00%
Bootstrap support for Q5CHZ0 as seed ortholog is 100%.
Bootstrap support for L0P8Q5 as seed ortholog is 100%.

Group of orthologs #403. Best score 132 bits
Score difference with first non-orthologous sequence - C.hominis:132 P.jiroveci:132

Q5CL95              	100.00%		L0PA90              	100.00%
Bootstrap support for Q5CL95 as seed ortholog is 100%.
Bootstrap support for L0PA90 as seed ortholog is 100%.

Group of orthologs #404. Best score 132 bits
Score difference with first non-orthologous sequence - C.hominis:132 P.jiroveci:132

Q5CID3              	100.00%		L0PEZ3              	100.00%
Bootstrap support for Q5CID3 as seed ortholog is 100%.
Bootstrap support for L0PEZ3 as seed ortholog is 100%.

Group of orthologs #405. Best score 132 bits
Score difference with first non-orthologous sequence - C.hominis:132 P.jiroveci:132

Q5CJJ5              	100.00%		L0PG89              	100.00%
Bootstrap support for Q5CJJ5 as seed ortholog is 100%.
Bootstrap support for L0PG89 as seed ortholog is 100%.

Group of orthologs #406. Best score 130 bits
Score difference with first non-orthologous sequence - C.hominis:130 P.jiroveci:130

Q5CPB0              	100.00%		L0P9X0              	100.00%
Bootstrap support for Q5CPB0 as seed ortholog is 100%.
Bootstrap support for L0P9X0 as seed ortholog is 100%.

Group of orthologs #407. Best score 129 bits
Score difference with first non-orthologous sequence - C.hominis:129 P.jiroveci:129

Q5CFP8              	100.00%		L0PFW7              	100.00%
Bootstrap support for Q5CFP8 as seed ortholog is 100%.
Bootstrap support for L0PFW7 as seed ortholog is 100%.

Group of orthologs #408. Best score 129 bits
Score difference with first non-orthologous sequence - C.hominis:129 P.jiroveci:129

Q5CGQ0              	100.00%		L0PFH7              	100.00%
Bootstrap support for Q5CGQ0 as seed ortholog is 100%.
Bootstrap support for L0PFH7 as seed ortholog is 100%.

Group of orthologs #409. Best score 129 bits
Score difference with first non-orthologous sequence - C.hominis:129 P.jiroveci:129

Q5CKJ1              	100.00%		L0PBK8              	100.00%
Bootstrap support for Q5CKJ1 as seed ortholog is 100%.
Bootstrap support for L0PBK8 as seed ortholog is 100%.

Group of orthologs #410. Best score 129 bits
Score difference with first non-orthologous sequence - C.hominis:129 P.jiroveci:129

Q5CLN5              	100.00%		L0PAZ1              	100.00%
Bootstrap support for Q5CLN5 as seed ortholog is 100%.
Bootstrap support for L0PAZ1 as seed ortholog is 100%.

Group of orthologs #411. Best score 129 bits
Score difference with first non-orthologous sequence - C.hominis:129 P.jiroveci:40

Q5CN21              	100.00%		L0PA28              	100.00%
Bootstrap support for Q5CN21 as seed ortholog is 100%.
Bootstrap support for L0PA28 as seed ortholog is 83%.

Group of orthologs #412. Best score 129 bits
Score difference with first non-orthologous sequence - C.hominis:129 P.jiroveci:129

Q5CIN7              	100.00%		L0PG93              	100.00%
Bootstrap support for Q5CIN7 as seed ortholog is 100%.
Bootstrap support for L0PG93 as seed ortholog is 100%.

Group of orthologs #413. Best score 129 bits
Score difference with first non-orthologous sequence - C.hominis:129 P.jiroveci:129

Q5CNY4              	100.00%		L0PB28              	100.00%
Bootstrap support for Q5CNY4 as seed ortholog is 100%.
Bootstrap support for L0PB28 as seed ortholog is 100%.

Group of orthologs #414. Best score 128 bits
Score difference with first non-orthologous sequence - C.hominis:128 P.jiroveci:128

Q5CM55              	100.00%		L0P9F7              	100.00%
                    	       		L0PGP0              	85.69%
Bootstrap support for Q5CM55 as seed ortholog is 100%.
Bootstrap support for L0P9F7 as seed ortholog is 100%.

Group of orthologs #415. Best score 128 bits
Score difference with first non-orthologous sequence - C.hominis:41 P.jiroveci:27

Q5CFN7              	100.00%		L0P7B1              	100.00%
Bootstrap support for Q5CFN7 as seed ortholog is 95%.
Bootstrap support for L0P7B1 as seed ortholog is 88%.

Group of orthologs #416. Best score 128 bits
Score difference with first non-orthologous sequence - C.hominis:128 P.jiroveci:128

Q5CLP4              	100.00%		L0P7N9              	100.00%
Bootstrap support for Q5CLP4 as seed ortholog is 100%.
Bootstrap support for L0P7N9 as seed ortholog is 100%.

Group of orthologs #417. Best score 128 bits
Score difference with first non-orthologous sequence - C.hominis:128 P.jiroveci:128

Q5CMV8              	100.00%		L0PF53              	100.00%
Bootstrap support for Q5CMV8 as seed ortholog is 100%.
Bootstrap support for L0PF53 as seed ortholog is 100%.

Group of orthologs #418. Best score 127 bits
Score difference with first non-orthologous sequence - C.hominis:127 P.jiroveci:127

Q5CFB4              	100.00%		L0P6S2              	100.00%
Bootstrap support for Q5CFB4 as seed ortholog is 100%.
Bootstrap support for L0P6S2 as seed ortholog is 100%.

Group of orthologs #419. Best score 127 bits
Score difference with first non-orthologous sequence - C.hominis:127 P.jiroveci:127

Q5CGU7              	100.00%		L0PGD6              	100.00%
Bootstrap support for Q5CGU7 as seed ortholog is 100%.
Bootstrap support for L0PGD6 as seed ortholog is 100%.

Group of orthologs #420. Best score 126 bits
Score difference with first non-orthologous sequence - C.hominis:32 P.jiroveci:31

Q5CIM4              	100.00%		L0PB47              	100.00%
                    	       		L0P9H7              	10.96%
Bootstrap support for Q5CIM4 as seed ortholog is 82%.
Bootstrap support for L0PB47 as seed ortholog is 82%.

Group of orthologs #421. Best score 126 bits
Score difference with first non-orthologous sequence - C.hominis:126 P.jiroveci:126

Q5CG70              	100.00%		L0P9A2              	100.00%
Bootstrap support for Q5CG70 as seed ortholog is 100%.
Bootstrap support for L0P9A2 as seed ortholog is 100%.

Group of orthologs #422. Best score 126 bits
Score difference with first non-orthologous sequence - C.hominis:126 P.jiroveci:126

Q5CKI1              	100.00%		L0P8H6              	100.00%
Bootstrap support for Q5CKI1 as seed ortholog is 100%.
Bootstrap support for L0P8H6 as seed ortholog is 100%.

Group of orthologs #423. Best score 124 bits
Score difference with first non-orthologous sequence - C.hominis:124 P.jiroveci:124

Q5CF07              	100.00%		L0PC18              	100.00%
Bootstrap support for Q5CF07 as seed ortholog is 100%.
Bootstrap support for L0PC18 as seed ortholog is 100%.

Group of orthologs #424. Best score 124 bits
Score difference with first non-orthologous sequence - C.hominis:124 P.jiroveci:124

Q5CIK9              	100.00%		L0P8R8              	100.00%
Bootstrap support for Q5CIK9 as seed ortholog is 100%.
Bootstrap support for L0P8R8 as seed ortholog is 100%.

Group of orthologs #425. Best score 124 bits
Score difference with first non-orthologous sequence - C.hominis:124 P.jiroveci:124

Q5CKX3              	100.00%		L0P9C7              	100.00%
Bootstrap support for Q5CKX3 as seed ortholog is 100%.
Bootstrap support for L0P9C7 as seed ortholog is 100%.

Group of orthologs #426. Best score 124 bits
Score difference with first non-orthologous sequence - C.hominis:79 P.jiroveci:124

Q5CEB8              	100.00%		L0PHT7              	100.00%
Bootstrap support for Q5CEB8 as seed ortholog is 97%.
Bootstrap support for L0PHT7 as seed ortholog is 100%.

Group of orthologs #427. Best score 124 bits
Score difference with first non-orthologous sequence - C.hominis:124 P.jiroveci:124

Q5CL43              	100.00%		L0PBQ1              	100.00%
Bootstrap support for Q5CL43 as seed ortholog is 100%.
Bootstrap support for L0PBQ1 as seed ortholog is 100%.

Group of orthologs #428. Best score 124 bits
Score difference with first non-orthologous sequence - C.hominis:67 P.jiroveci:65

Q5CHU2              	100.00%		L0PFK0              	100.00%
Bootstrap support for Q5CHU2 as seed ortholog is 92%.
Bootstrap support for L0PFK0 as seed ortholog is 96%.

Group of orthologs #429. Best score 124 bits
Score difference with first non-orthologous sequence - C.hominis:124 P.jiroveci:124

Q5CMZ9              	100.00%		L0PBX2              	100.00%
Bootstrap support for Q5CMZ9 as seed ortholog is 100%.
Bootstrap support for L0PBX2 as seed ortholog is 100%.

Group of orthologs #430. Best score 124 bits
Score difference with first non-orthologous sequence - C.hominis:27 P.jiroveci:124

Q5CN37              	100.00%		L0PF75              	100.00%
Bootstrap support for Q5CN37 as seed ortholog is 80%.
Bootstrap support for L0PF75 as seed ortholog is 100%.

Group of orthologs #431. Best score 123 bits
Score difference with first non-orthologous sequence - C.hominis:123 P.jiroveci:123

Q5CEA6              	100.00%		L0PEG0              	100.00%
Bootstrap support for Q5CEA6 as seed ortholog is 100%.
Bootstrap support for L0PEG0 as seed ortholog is 100%.

Group of orthologs #432. Best score 123 bits
Score difference with first non-orthologous sequence - C.hominis:123 P.jiroveci:123

Q5CIM3              	100.00%		L0PCZ4              	100.00%
Bootstrap support for Q5CIM3 as seed ortholog is 100%.
Bootstrap support for L0PCZ4 as seed ortholog is 100%.

Group of orthologs #433. Best score 122 bits
Score difference with first non-orthologous sequence - C.hominis:122 P.jiroveci:122

Q5CFN0              	100.00%		L0PE37              	100.00%
Bootstrap support for Q5CFN0 as seed ortholog is 100%.
Bootstrap support for L0PE37 as seed ortholog is 100%.

Group of orthologs #434. Best score 122 bits
Score difference with first non-orthologous sequence - C.hominis:44 P.jiroveci:122

Q5CKE9              	100.00%		L0PAV2              	100.00%
Bootstrap support for Q5CKE9 as seed ortholog is 99%.
Bootstrap support for L0PAV2 as seed ortholog is 100%.

Group of orthologs #435. Best score 121 bits
Score difference with first non-orthologous sequence - C.hominis:121 P.jiroveci:121

Q5CIB6              	100.00%		L0P9M3              	100.00%
Bootstrap support for Q5CIB6 as seed ortholog is 100%.
Bootstrap support for L0P9M3 as seed ortholog is 100%.

Group of orthologs #436. Best score 121 bits
Score difference with first non-orthologous sequence - C.hominis:121 P.jiroveci:121

Q5CJP5              	100.00%		L0P8S1              	100.00%
Bootstrap support for Q5CJP5 as seed ortholog is 100%.
Bootstrap support for L0P8S1 as seed ortholog is 100%.

Group of orthologs #437. Best score 121 bits
Score difference with first non-orthologous sequence - C.hominis:121 P.jiroveci:121

Q5CKU2              	100.00%		L0P7L9              	100.00%
Bootstrap support for Q5CKU2 as seed ortholog is 100%.
Bootstrap support for L0P7L9 as seed ortholog is 100%.

Group of orthologs #438. Best score 121 bits
Score difference with first non-orthologous sequence - C.hominis:121 P.jiroveci:121

Q5CM54              	100.00%		L0P7G9              	100.00%
Bootstrap support for Q5CM54 as seed ortholog is 100%.
Bootstrap support for L0P7G9 as seed ortholog is 100%.

Group of orthologs #439. Best score 121 bits
Score difference with first non-orthologous sequence - C.hominis:121 P.jiroveci:121

Q5CNP1              	100.00%		L0P8R4              	100.00%
Bootstrap support for Q5CNP1 as seed ortholog is 100%.
Bootstrap support for L0P8R4 as seed ortholog is 100%.

Group of orthologs #440. Best score 121 bits
Score difference with first non-orthologous sequence - C.hominis:43 P.jiroveci:76

Q5CNG5              	100.00%		L0PDP9              	100.00%
Bootstrap support for Q5CNG5 as seed ortholog is 93%.
Bootstrap support for L0PDP9 as seed ortholog is 99%.

Group of orthologs #441. Best score 120 bits
Score difference with first non-orthologous sequence - C.hominis:38 P.jiroveci:120

Q5CGJ4              	100.00%		L0PDE4              	100.00%
Bootstrap support for Q5CGJ4 as seed ortholog is 90%.
Bootstrap support for L0PDE4 as seed ortholog is 100%.

Group of orthologs #442. Best score 119 bits
Score difference with first non-orthologous sequence - C.hominis:119 P.jiroveci:119

Q5CFB9              	100.00%		L0PAB8              	100.00%
Bootstrap support for Q5CFB9 as seed ortholog is 100%.
Bootstrap support for L0PAB8 as seed ortholog is 100%.

Group of orthologs #443. Best score 119 bits
Score difference with first non-orthologous sequence - C.hominis:119 P.jiroveci:119

Q5CP88              	100.00%		L0P805              	100.00%
Bootstrap support for Q5CP88 as seed ortholog is 100%.
Bootstrap support for L0P805 as seed ortholog is 100%.

Group of orthologs #444. Best score 118 bits
Score difference with first non-orthologous sequence - C.hominis:118 P.jiroveci:75

Q5CIP3              	100.00%		L0PAD3              	100.00%
Bootstrap support for Q5CIP3 as seed ortholog is 100%.
Bootstrap support for L0PAD3 as seed ortholog is 99%.

Group of orthologs #445. Best score 118 bits
Score difference with first non-orthologous sequence - C.hominis:118 P.jiroveci:118

Q5CP46              	100.00%		L0P9B0              	100.00%
Bootstrap support for Q5CP46 as seed ortholog is 100%.
Bootstrap support for L0P9B0 as seed ortholog is 100%.

Group of orthologs #446. Best score 117 bits
Score difference with first non-orthologous sequence - C.hominis:117 P.jiroveci:71

Q5CEF0              	100.00%		L0PC80              	100.00%
Bootstrap support for Q5CEF0 as seed ortholog is 100%.
Bootstrap support for L0PC80 as seed ortholog is 99%.

Group of orthologs #447. Best score 117 bits
Score difference with first non-orthologous sequence - C.hominis:117 P.jiroveci:117

Q5CNT5              	100.00%		L0P870              	100.00%
Bootstrap support for Q5CNT5 as seed ortholog is 100%.
Bootstrap support for L0P870 as seed ortholog is 100%.

Group of orthologs #448. Best score 117 bits
Score difference with first non-orthologous sequence - C.hominis:117 P.jiroveci:117

Q5CN25              	100.00%		L0PAM3              	100.00%
Bootstrap support for Q5CN25 as seed ortholog is 100%.
Bootstrap support for L0PAM3 as seed ortholog is 100%.

Group of orthologs #449. Best score 117 bits
Score difference with first non-orthologous sequence - C.hominis:117 P.jiroveci:46

Q5CJ80              	100.00%		L0PEW5              	100.00%
Bootstrap support for Q5CJ80 as seed ortholog is 100%.
Bootstrap support for L0PEW5 as seed ortholog is 88%.

Group of orthologs #450. Best score 116 bits
Score difference with first non-orthologous sequence - C.hominis:116 P.jiroveci:116

Q5CEK7              	100.00%		L0PCW8              	100.00%
Bootstrap support for Q5CEK7 as seed ortholog is 100%.
Bootstrap support for L0PCW8 as seed ortholog is 100%.

Group of orthologs #451. Best score 116 bits
Score difference with first non-orthologous sequence - C.hominis:116 P.jiroveci:116

Q5CJW0              	100.00%		L0PAP1              	100.00%
Bootstrap support for Q5CJW0 as seed ortholog is 100%.
Bootstrap support for L0PAP1 as seed ortholog is 100%.

Group of orthologs #452. Best score 116 bits
Score difference with first non-orthologous sequence - C.hominis:116 P.jiroveci:22

Q5CKQ4              	100.00%		L0PB61              	100.00%
Bootstrap support for Q5CKQ4 as seed ortholog is 100%.
Bootstrap support for L0PB61 as seed ortholog is 57%.
Alternative seed ortholog is L0PCG1 (22 bits away from this cluster)

Group of orthologs #453. Best score 116 bits
Score difference with first non-orthologous sequence - C.hominis:116 P.jiroveci:116

Q5CFV6              	100.00%		L0PGQ8              	100.00%
Bootstrap support for Q5CFV6 as seed ortholog is 100%.
Bootstrap support for L0PGQ8 as seed ortholog is 100%.

Group of orthologs #454. Best score 116 bits
Score difference with first non-orthologous sequence - C.hominis:116 P.jiroveci:116

Q5CIZ8              	100.00%		L0PF38              	100.00%
Bootstrap support for Q5CIZ8 as seed ortholog is 100%.
Bootstrap support for L0PF38 as seed ortholog is 100%.

Group of orthologs #455. Best score 115 bits
Score difference with first non-orthologous sequence - C.hominis:115 P.jiroveci:115

Q5CEU1              	100.00%		L0P9Q6              	100.00%
Bootstrap support for Q5CEU1 as seed ortholog is 100%.
Bootstrap support for L0P9Q6 as seed ortholog is 100%.

Group of orthologs #456. Best score 114 bits
Score difference with first non-orthologous sequence - C.hominis:114 P.jiroveci:114

Q5CF70              	100.00%		L0PBN8              	100.00%
                    	       		L0PC66              	100.00%
Bootstrap support for Q5CF70 as seed ortholog is 100%.
Bootstrap support for L0PBN8 as seed ortholog is 100%.
Bootstrap support for L0PC66 as seed ortholog is 100%.

Group of orthologs #457. Best score 114 bits
Score difference with first non-orthologous sequence - C.hominis:114 P.jiroveci:114

Q5CJ47              	100.00%		L0PI61              	100.00%
                    	       		L0PA50              	37.61%
Bootstrap support for Q5CJ47 as seed ortholog is 100%.
Bootstrap support for L0PI61 as seed ortholog is 100%.

Group of orthologs #458. Best score 114 bits
Score difference with first non-orthologous sequence - C.hominis:114 P.jiroveci:72

Q5CGC9              	100.00%		L0P7S0              	100.00%
Bootstrap support for Q5CGC9 as seed ortholog is 100%.
Bootstrap support for L0P7S0 as seed ortholog is 100%.

Group of orthologs #459. Best score 114 bits
Score difference with first non-orthologous sequence - C.hominis:114 P.jiroveci:114

Q5CM85              	100.00%		L0PFI5              	100.00%
Bootstrap support for Q5CM85 as seed ortholog is 100%.
Bootstrap support for L0PFI5 as seed ortholog is 100%.

Group of orthologs #460. Best score 113 bits
Score difference with first non-orthologous sequence - C.hominis:32 P.jiroveci:113

Q5CE74              	100.00%		L0PE03              	100.00%
Bootstrap support for Q5CE74 as seed ortholog is 82%.
Bootstrap support for L0PE03 as seed ortholog is 100%.

Group of orthologs #461. Best score 113 bits
Score difference with first non-orthologous sequence - C.hominis:61 P.jiroveci:113

Q5CKF1              	100.00%		L0PAL2              	100.00%
Bootstrap support for Q5CKF1 as seed ortholog is 95%.
Bootstrap support for L0PAL2 as seed ortholog is 100%.

Group of orthologs #462. Best score 113 bits
Score difference with first non-orthologous sequence - C.hominis:113 P.jiroveci:52

Q5CLM0              	100.00%		L0PDE1              	100.00%
Bootstrap support for Q5CLM0 as seed ortholog is 100%.
Bootstrap support for L0PDE1 as seed ortholog is 95%.

Group of orthologs #463. Best score 113 bits
Score difference with first non-orthologous sequence - C.hominis:113 P.jiroveci:113

Q5CL93              	100.00%		L0PGI4              	100.00%
Bootstrap support for Q5CL93 as seed ortholog is 100%.
Bootstrap support for L0PGI4 as seed ortholog is 100%.

Group of orthologs #464. Best score 113 bits
Score difference with first non-orthologous sequence - C.hominis:113 P.jiroveci:113

Q5CLS0              	100.00%		L0PG04              	100.00%
Bootstrap support for Q5CLS0 as seed ortholog is 100%.
Bootstrap support for L0PG04 as seed ortholog is 100%.

Group of orthologs #465. Best score 112 bits
Score difference with first non-orthologous sequence - C.hominis:41 P.jiroveci:112

Q5CHB3              	100.00%		L0PHH9              	100.00%
                    	       		L0PA17              	19.92%
Bootstrap support for Q5CHB3 as seed ortholog is 97%.
Bootstrap support for L0PHH9 as seed ortholog is 100%.

Group of orthologs #466. Best score 112 bits
Score difference with first non-orthologous sequence - C.hominis:41 P.jiroveci:112

Q5CK86              	100.00%		L0P7P4              	100.00%
Bootstrap support for Q5CK86 as seed ortholog is 92%.
Bootstrap support for L0P7P4 as seed ortholog is 100%.

Group of orthologs #467. Best score 112 bits
Score difference with first non-orthologous sequence - C.hominis:112 P.jiroveci:112

Q5CLF0              	100.00%		L0P800              	100.00%
Bootstrap support for Q5CLF0 as seed ortholog is 100%.
Bootstrap support for L0P800 as seed ortholog is 100%.

Group of orthologs #468. Best score 112 bits
Score difference with first non-orthologous sequence - C.hominis:112 P.jiroveci:71

Q5CLX8              	100.00%		L0PAH2              	100.00%
Bootstrap support for Q5CLX8 as seed ortholog is 100%.
Bootstrap support for L0PAH2 as seed ortholog is 96%.

Group of orthologs #469. Best score 112 bits
Score difference with first non-orthologous sequence - C.hominis:112 P.jiroveci:36

Q5CL96              	100.00%		L0PFE9              	100.00%
Bootstrap support for Q5CL96 as seed ortholog is 100%.
Bootstrap support for L0PFE9 as seed ortholog is 87%.

Group of orthologs #470. Best score 111 bits
Score difference with first non-orthologous sequence - C.hominis:111 P.jiroveci:111

Q5CGR2              	100.00%		L0P852              	100.00%
Bootstrap support for Q5CGR2 as seed ortholog is 100%.
Bootstrap support for L0P852 as seed ortholog is 100%.

Group of orthologs #471. Best score 111 bits
Score difference with first non-orthologous sequence - C.hominis:111 P.jiroveci:31

Q5CMJ5              	100.00%		L0PBD5              	100.00%
Bootstrap support for Q5CMJ5 as seed ortholog is 100%.
Bootstrap support for L0PBD5 as seed ortholog is 74%.
Alternative seed ortholog is L0P8N0 (31 bits away from this cluster)

Group of orthologs #472. Best score 111 bits
Score difference with first non-orthologous sequence - C.hominis:111 P.jiroveci:111

Q5CP79              	100.00%		L0P9W6              	100.00%
Bootstrap support for Q5CP79 as seed ortholog is 100%.
Bootstrap support for L0P9W6 as seed ortholog is 100%.

Group of orthologs #473. Best score 110 bits
Score difference with first non-orthologous sequence - C.hominis:110 P.jiroveci:110

Q5CIL4              	100.00%		L0PAL9              	100.00%
                    	       		L0PBY7              	47.63%
Bootstrap support for Q5CIL4 as seed ortholog is 100%.
Bootstrap support for L0PAL9 as seed ortholog is 100%.

Group of orthologs #474. Best score 110 bits
Score difference with first non-orthologous sequence - C.hominis:25 P.jiroveci:66

Q5CG88              	100.00%		L0PAF0              	100.00%
Bootstrap support for Q5CG88 as seed ortholog is 73%.
Alternative seed ortholog is Q5CNK0 (25 bits away from this cluster)
Bootstrap support for L0PAF0 as seed ortholog is 98%.

Group of orthologs #475. Best score 110 bits
Score difference with first non-orthologous sequence - C.hominis:110 P.jiroveci:110

Q5CNX8              	100.00%		L0P9P8              	100.00%
Bootstrap support for Q5CNX8 as seed ortholog is 100%.
Bootstrap support for L0P9P8 as seed ortholog is 100%.

Group of orthologs #476. Best score 109 bits
Score difference with first non-orthologous sequence - C.hominis:109 P.jiroveci:109

Q5CK35              	100.00%		L0PEI9              	100.00%
Q5CK34              	25.35%		
Bootstrap support for Q5CK35 as seed ortholog is 100%.
Bootstrap support for L0PEI9 as seed ortholog is 100%.

Group of orthologs #477. Best score 109 bits
Score difference with first non-orthologous sequence - C.hominis:109 P.jiroveci:109

Q5CH23              	100.00%		L0P7A1              	100.00%
Bootstrap support for Q5CH23 as seed ortholog is 100%.
Bootstrap support for L0P7A1 as seed ortholog is 100%.

Group of orthologs #478. Best score 108 bits
Score difference with first non-orthologous sequence - C.hominis:108 P.jiroveci:108

Q5CFY3              	100.00%		L0PCM4              	100.00%
Bootstrap support for Q5CFY3 as seed ortholog is 100%.
Bootstrap support for L0PCM4 as seed ortholog is 100%.

Group of orthologs #479. Best score 107 bits
Score difference with first non-orthologous sequence - C.hominis:107 P.jiroveci:107

Q5CH48              	100.00%		L0P996              	100.00%
Q5CM04              	7.79%		L0PEI5              	5.75%
Bootstrap support for Q5CH48 as seed ortholog is 100%.
Bootstrap support for L0P996 as seed ortholog is 100%.

Group of orthologs #480. Best score 106 bits
Score difference with first non-orthologous sequence - C.hominis:42 P.jiroveci:106

Q5CM23              	100.00%		L0P9Z5              	100.00%
Bootstrap support for Q5CM23 as seed ortholog is 78%.
Bootstrap support for L0P9Z5 as seed ortholog is 100%.

Group of orthologs #481. Best score 106 bits
Score difference with first non-orthologous sequence - C.hominis:63 P.jiroveci:58

Q5CMU8              	100.00%		L0PG69              	100.00%
Bootstrap support for Q5CMU8 as seed ortholog is 96%.
Bootstrap support for L0PG69 as seed ortholog is 92%.

Group of orthologs #482. Best score 105 bits
Score difference with first non-orthologous sequence - C.hominis:105 P.jiroveci:105

Q5CFA5              	100.00%		L0PE02              	100.00%
Bootstrap support for Q5CFA5 as seed ortholog is 100%.
Bootstrap support for L0PE02 as seed ortholog is 100%.

Group of orthologs #483. Best score 104 bits
Score difference with first non-orthologous sequence - C.hominis:104 P.jiroveci:104

Q5CLW4              	100.00%		L0P8K4              	100.00%
Bootstrap support for Q5CLW4 as seed ortholog is 100%.
Bootstrap support for L0P8K4 as seed ortholog is 100%.

Group of orthologs #484. Best score 104 bits
Score difference with first non-orthologous sequence - C.hominis:62 P.jiroveci:104

Q5CHN2              	100.00%		L0PEH7              	100.00%
Bootstrap support for Q5CHN2 as seed ortholog is 95%.
Bootstrap support for L0PEH7 as seed ortholog is 100%.

Group of orthologs #485. Best score 104 bits
Score difference with first non-orthologous sequence - C.hominis:104 P.jiroveci:104

Q5CGC6              	100.00%		L0PG13              	100.00%
Bootstrap support for Q5CGC6 as seed ortholog is 100%.
Bootstrap support for L0PG13 as seed ortholog is 100%.

Group of orthologs #486. Best score 104 bits
Score difference with first non-orthologous sequence - C.hominis:104 P.jiroveci:104

Q5CJQ1              	100.00%		L0PCZ2              	100.00%
Bootstrap support for Q5CJQ1 as seed ortholog is 100%.
Bootstrap support for L0PCZ2 as seed ortholog is 100%.

Group of orthologs #487. Best score 104 bits
Score difference with first non-orthologous sequence - C.hominis:58 P.jiroveci:38

Q5CJP6              	100.00%		L0PEH9              	100.00%
Bootstrap support for Q5CJP6 as seed ortholog is 93%.
Bootstrap support for L0PEH9 as seed ortholog is 83%.

Group of orthologs #488. Best score 104 bits
Score difference with first non-orthologous sequence - C.hominis:30 P.jiroveci:35

Q5CL12              	100.00%		L0PD63              	100.00%
Bootstrap support for Q5CL12 as seed ortholog is 88%.
Bootstrap support for L0PD63 as seed ortholog is 93%.

Group of orthologs #489. Best score 104 bits
Score difference with first non-orthologous sequence - C.hominis:104 P.jiroveci:104

Q5CN94              	100.00%		L0PEX2              	100.00%
Bootstrap support for Q5CN94 as seed ortholog is 100%.
Bootstrap support for L0PEX2 as seed ortholog is 100%.

Group of orthologs #490. Best score 103 bits
Score difference with first non-orthologous sequence - C.hominis:103 P.jiroveci:103

Q5CK05              	100.00%		L0PCG3              	100.00%
Bootstrap support for Q5CK05 as seed ortholog is 100%.
Bootstrap support for L0PCG3 as seed ortholog is 100%.

Group of orthologs #491. Best score 103 bits
Score difference with first non-orthologous sequence - C.hominis:103 P.jiroveci:103

Q5CMF5              	100.00%		L0PDH1              	100.00%
Bootstrap support for Q5CMF5 as seed ortholog is 100%.
Bootstrap support for L0PDH1 as seed ortholog is 100%.

Group of orthologs #492. Best score 102 bits
Score difference with first non-orthologous sequence - C.hominis:102 P.jiroveci:102

Q5CGZ7              	100.00%		L0PAF2              	100.00%
Bootstrap support for Q5CGZ7 as seed ortholog is 100%.
Bootstrap support for L0PAF2 as seed ortholog is 100%.

Group of orthologs #493. Best score 102 bits
Score difference with first non-orthologous sequence - C.hominis:102 P.jiroveci:102

Q5CJ04              	100.00%		L0PCH6              	100.00%
Bootstrap support for Q5CJ04 as seed ortholog is 100%.
Bootstrap support for L0PCH6 as seed ortholog is 100%.

Group of orthologs #494. Best score 102 bits
Score difference with first non-orthologous sequence - C.hominis:102 P.jiroveci:102

Q5CI26              	100.00%		L0PHC9              	100.00%
Bootstrap support for Q5CI26 as seed ortholog is 100%.
Bootstrap support for L0PHC9 as seed ortholog is 100%.

Group of orthologs #495. Best score 102 bits
Score difference with first non-orthologous sequence - C.hominis:102 P.jiroveci:102

Q5CLR9              	100.00%		L0PEP9              	100.00%
Bootstrap support for Q5CLR9 as seed ortholog is 100%.
Bootstrap support for L0PEP9 as seed ortholog is 100%.

Group of orthologs #496. Best score 102 bits
Score difference with first non-orthologous sequence - C.hominis:19 P.jiroveci:102

Q5CMT1              	100.00%		L0PFZ5              	100.00%
Bootstrap support for Q5CMT1 as seed ortholog is 68%.
Alternative seed ortholog is Q5CNK0 (19 bits away from this cluster)
Bootstrap support for L0PFZ5 as seed ortholog is 100%.

Group of orthologs #497. Best score 101 bits
Score difference with first non-orthologous sequence - C.hominis:101 P.jiroveci:101

Q5CIA1              	100.00%		L0PAG4              	100.00%
Bootstrap support for Q5CIA1 as seed ortholog is 100%.
Bootstrap support for L0PAG4 as seed ortholog is 100%.

Group of orthologs #498. Best score 101 bits
Score difference with first non-orthologous sequence - C.hominis:101 P.jiroveci:101

Q5CIU0              	100.00%		L0PBX9              	100.00%
Bootstrap support for Q5CIU0 as seed ortholog is 100%.
Bootstrap support for L0PBX9 as seed ortholog is 100%.

Group of orthologs #499. Best score 101 bits
Score difference with first non-orthologous sequence - C.hominis:101 P.jiroveci:101

Q5CGE8              	100.00%		L0PF64              	100.00%
Bootstrap support for Q5CGE8 as seed ortholog is 100%.
Bootstrap support for L0PF64 as seed ortholog is 100%.

Group of orthologs #500. Best score 100 bits
Score difference with first non-orthologous sequence - C.hominis:100 P.jiroveci:100

Q5CNC0              	100.00%		L0PCQ2              	100.00%
Bootstrap support for Q5CNC0 as seed ortholog is 100%.
Bootstrap support for L0PCQ2 as seed ortholog is 100%.

Group of orthologs #501. Best score 99 bits
Score difference with first non-orthologous sequence - C.hominis:99 P.jiroveci:99

Q5CHR5              	100.00%		L0PC70              	100.00%
Bootstrap support for Q5CHR5 as seed ortholog is 100%.
Bootstrap support for L0PC70 as seed ortholog is 100%.

Group of orthologs #502. Best score 99 bits
Score difference with first non-orthologous sequence - C.hominis:99 P.jiroveci:99

Q5CLR3              	100.00%		L0PDL5              	100.00%
Bootstrap support for Q5CLR3 as seed ortholog is 100%.
Bootstrap support for L0PDL5 as seed ortholog is 100%.

Group of orthologs #503. Best score 97 bits
Score difference with first non-orthologous sequence - C.hominis:97 P.jiroveci:97

Q5CMF8              	100.00%		L0P9D3              	100.00%
                    	       		L0P7B2              	60.32%
Bootstrap support for Q5CMF8 as seed ortholog is 100%.
Bootstrap support for L0P9D3 as seed ortholog is 100%.

Group of orthologs #504. Best score 96 bits
Score difference with first non-orthologous sequence - C.hominis:96 P.jiroveci:96

Q5CFV2              	100.00%		L0P9T3              	100.00%
Bootstrap support for Q5CFV2 as seed ortholog is 100%.
Bootstrap support for L0P9T3 as seed ortholog is 100%.

Group of orthologs #505. Best score 96 bits
Score difference with first non-orthologous sequence - C.hominis:96 P.jiroveci:96

Q5CFZ0              	100.00%		L0PBS9              	100.00%
Bootstrap support for Q5CFZ0 as seed ortholog is 100%.
Bootstrap support for L0PBS9 as seed ortholog is 100%.

Group of orthologs #506. Best score 96 bits
Score difference with first non-orthologous sequence - C.hominis:96 P.jiroveci:96

Q5CLX0              	100.00%		L0PAA1              	100.00%
Bootstrap support for Q5CLX0 as seed ortholog is 100%.
Bootstrap support for L0PAA1 as seed ortholog is 100%.

Group of orthologs #507. Best score 95 bits
Score difference with first non-orthologous sequence - C.hominis:95 P.jiroveci:95

Q5CF97              	100.00%		L0PBR1              	100.00%
Bootstrap support for Q5CF97 as seed ortholog is 100%.
Bootstrap support for L0PBR1 as seed ortholog is 100%.

Group of orthologs #508. Best score 95 bits
Score difference with first non-orthologous sequence - C.hominis:95 P.jiroveci:14

Q5CFH8              	100.00%		L0PBW9              	100.00%
Bootstrap support for Q5CFH8 as seed ortholog is 100%.
Bootstrap support for L0PBW9 as seed ortholog is 65%.
Alternative seed ortholog is L0PD77 (14 bits away from this cluster)

Group of orthologs #509. Best score 95 bits
Score difference with first non-orthologous sequence - C.hominis:95 P.jiroveci:95

Q5CNX1              	100.00%		L0P9P5              	100.00%
Bootstrap support for Q5CNX1 as seed ortholog is 100%.
Bootstrap support for L0P9P5 as seed ortholog is 100%.

Group of orthologs #510. Best score 95 bits
Score difference with first non-orthologous sequence - C.hominis:95 P.jiroveci:95

Q5CN83              	100.00%		L0PF58              	100.00%
Bootstrap support for Q5CN83 as seed ortholog is 100%.
Bootstrap support for L0PF58 as seed ortholog is 100%.

Group of orthologs #511. Best score 94 bits
Score difference with first non-orthologous sequence - C.hominis:94 P.jiroveci:94

Q5CHU5              	100.00%		L0P8R9              	100.00%
Bootstrap support for Q5CHU5 as seed ortholog is 100%.
Bootstrap support for L0P8R9 as seed ortholog is 100%.

Group of orthologs #512. Best score 94 bits
Score difference with first non-orthologous sequence - C.hominis:94 P.jiroveci:94

Q5CHH1              	100.00%		L0PEF8              	100.00%
Bootstrap support for Q5CHH1 as seed ortholog is 100%.
Bootstrap support for L0PEF8 as seed ortholog is 100%.

Group of orthologs #513. Best score 94 bits
Score difference with first non-orthologous sequence - C.hominis:94 P.jiroveci:94

Q5CJQ2              	100.00%		L0PFV3              	100.00%
Bootstrap support for Q5CJQ2 as seed ortholog is 100%.
Bootstrap support for L0PFV3 as seed ortholog is 100%.

Group of orthologs #514. Best score 93 bits
Score difference with first non-orthologous sequence - C.hominis:93 P.jiroveci:93

Q5CHS9              	100.00%		L0PA51              	100.00%
Bootstrap support for Q5CHS9 as seed ortholog is 100%.
Bootstrap support for L0PA51 as seed ortholog is 100%.

Group of orthologs #515. Best score 93 bits
Score difference with first non-orthologous sequence - C.hominis:93 P.jiroveci:93

Q5CF16              	100.00%		L0PFZ7              	100.00%
Bootstrap support for Q5CF16 as seed ortholog is 100%.
Bootstrap support for L0PFZ7 as seed ortholog is 100%.

Group of orthologs #516. Best score 92 bits
Score difference with first non-orthologous sequence - C.hominis:92 P.jiroveci:92

Q5CF23              	100.00%		L0P8D6              	100.00%
Bootstrap support for Q5CF23 as seed ortholog is 100%.
Bootstrap support for L0P8D6 as seed ortholog is 100%.

Group of orthologs #517. Best score 92 bits
Score difference with first non-orthologous sequence - C.hominis:92 P.jiroveci:92

Q5CJW6              	100.00%		L0PA36              	100.00%
Bootstrap support for Q5CJW6 as seed ortholog is 100%.
Bootstrap support for L0PA36 as seed ortholog is 100%.

Group of orthologs #518. Best score 92 bits
Score difference with first non-orthologous sequence - C.hominis:92 P.jiroveci:92

Q5CGL7              	100.00%		L0PEI6              	100.00%
Bootstrap support for Q5CGL7 as seed ortholog is 100%.
Bootstrap support for L0PEI6 as seed ortholog is 100%.

Group of orthologs #519. Best score 92 bits
Score difference with first non-orthologous sequence - C.hominis:92 P.jiroveci:92

Q5CH67              	100.00%		L0PED2              	100.00%
Bootstrap support for Q5CH67 as seed ortholog is 100%.
Bootstrap support for L0PED2 as seed ortholog is 100%.

Group of orthologs #520. Best score 92 bits
Score difference with first non-orthologous sequence - C.hominis:92 P.jiroveci:48

Q5CKG4              	100.00%		L0PEJ9              	100.00%
Bootstrap support for Q5CKG4 as seed ortholog is 100%.
Bootstrap support for L0PEJ9 as seed ortholog is 86%.

Group of orthologs #521. Best score 92 bits
Score difference with first non-orthologous sequence - C.hominis:92 P.jiroveci:3

Q5CLS7              	100.00%		L0PDR6              	100.00%
Bootstrap support for Q5CLS7 as seed ortholog is 100%.
Bootstrap support for L0PDR6 as seed ortholog is 52%.
Alternative seed ortholog is L0PH42 (3 bits away from this cluster)

Group of orthologs #522. Best score 92 bits
Score difference with first non-orthologous sequence - C.hominis:92 P.jiroveci:12

Q5CP72              	100.00%		L0PEI4              	100.00%
Bootstrap support for Q5CP72 as seed ortholog is 100%.
Bootstrap support for L0PEI4 as seed ortholog is 73%.
Alternative seed ortholog is L0PHD0 (12 bits away from this cluster)

Group of orthologs #523. Best score 91 bits
Score difference with first non-orthologous sequence - C.hominis:91 P.jiroveci:91

Q5CJK6              	100.00%		L0P939              	100.00%
                    	       		L0PFG4              	89.40%
Bootstrap support for Q5CJK6 as seed ortholog is 100%.
Bootstrap support for L0P939 as seed ortholog is 100%.

Group of orthologs #524. Best score 91 bits
Score difference with first non-orthologous sequence - C.hominis:91 P.jiroveci:91

Q5CES5              	100.00%		L0P6Z5              	100.00%
Bootstrap support for Q5CES5 as seed ortholog is 100%.
Bootstrap support for L0P6Z5 as seed ortholog is 100%.

Group of orthologs #525. Best score 91 bits
Score difference with first non-orthologous sequence - C.hominis:91 P.jiroveci:91

Q5CMM9              	100.00%		L0PEK8              	100.00%
Bootstrap support for Q5CMM9 as seed ortholog is 100%.
Bootstrap support for L0PEK8 as seed ortholog is 100%.

Group of orthologs #526. Best score 90 bits
Score difference with first non-orthologous sequence - C.hominis:90 P.jiroveci:90

Q5CH57              	100.00%		L0PCE5              	100.00%
Q5CLZ2              	6.55%		
Bootstrap support for Q5CH57 as seed ortholog is 100%.
Bootstrap support for L0PCE5 as seed ortholog is 100%.

Group of orthologs #527. Best score 89 bits
Score difference with first non-orthologous sequence - C.hominis:89 P.jiroveci:89

Q5CGX1              	100.00%		L0P914              	100.00%
Bootstrap support for Q5CGX1 as seed ortholog is 100%.
Bootstrap support for L0P914 as seed ortholog is 100%.

Group of orthologs #528. Best score 88 bits
Score difference with first non-orthologous sequence - C.hominis:88 P.jiroveci:88

Q5CGK2              	100.00%		L0P9F1              	100.00%
Bootstrap support for Q5CGK2 as seed ortholog is 100%.
Bootstrap support for L0P9F1 as seed ortholog is 100%.

Group of orthologs #529. Best score 87 bits
Score difference with first non-orthologous sequence - C.hominis:87 P.jiroveci:87

Q5CGB2              	100.00%		L0P9D5              	100.00%
Bootstrap support for Q5CGB2 as seed ortholog is 100%.
Bootstrap support for L0P9D5 as seed ortholog is 100%.

Group of orthologs #530. Best score 87 bits
Score difference with first non-orthologous sequence - C.hominis:87 P.jiroveci:87

Q5CJB9              	100.00%		L0PC08              	100.00%
Bootstrap support for Q5CJB9 as seed ortholog is 100%.
Bootstrap support for L0PC08 as seed ortholog is 100%.

Group of orthologs #531. Best score 87 bits
Score difference with first non-orthologous sequence - C.hominis:87 P.jiroveci:87

Q5CNI3              	100.00%		L0P8X3              	100.00%
Bootstrap support for Q5CNI3 as seed ortholog is 100%.
Bootstrap support for L0P8X3 as seed ortholog is 100%.

Group of orthologs #532. Best score 86 bits
Score difference with first non-orthologous sequence - C.hominis:86 P.jiroveci:86

Q5CHC8              	100.00%		L0PB81              	100.00%
Bootstrap support for Q5CHC8 as seed ortholog is 100%.
Bootstrap support for L0PB81 as seed ortholog is 100%.

Group of orthologs #533. Best score 86 bits
Score difference with first non-orthologous sequence - C.hominis:86 P.jiroveci:86

Q5CNV1              	100.00%		L0PCQ4              	100.00%
Bootstrap support for Q5CNV1 as seed ortholog is 100%.
Bootstrap support for L0PCQ4 as seed ortholog is 100%.

Group of orthologs #534. Best score 85 bits
Score difference with first non-orthologous sequence - C.hominis:85 P.jiroveci:85

Q5CG79              	100.00%		L0PDV9              	100.00%
Bootstrap support for Q5CG79 as seed ortholog is 100%.
Bootstrap support for L0PDV9 as seed ortholog is 100%.

Group of orthologs #535. Best score 85 bits
Score difference with first non-orthologous sequence - C.hominis:85 P.jiroveci:85

Q5CGW3              	100.00%		L0PGC0              	100.00%
Bootstrap support for Q5CGW3 as seed ortholog is 100%.
Bootstrap support for L0PGC0 as seed ortholog is 100%.

Group of orthologs #536. Best score 85 bits
Score difference with first non-orthologous sequence - C.hominis:85 P.jiroveci:85

Q5CNG3              	100.00%		L0PA97              	100.00%
Bootstrap support for Q5CNG3 as seed ortholog is 100%.
Bootstrap support for L0PA97 as seed ortholog is 100%.

Group of orthologs #537. Best score 84 bits
Score difference with first non-orthologous sequence - C.hominis:84 P.jiroveci:84

Q5CI29              	100.00%		L0PBS7              	100.00%
Bootstrap support for Q5CI29 as seed ortholog is 100%.
Bootstrap support for L0PBS7 as seed ortholog is 100%.

Group of orthologs #538. Best score 84 bits
Score difference with first non-orthologous sequence - C.hominis:84 P.jiroveci:84

Q5CIT4              	100.00%		L0PFK7              	100.00%
Bootstrap support for Q5CIT4 as seed ortholog is 100%.
Bootstrap support for L0PFK7 as seed ortholog is 100%.

Group of orthologs #539. Best score 84 bits
Score difference with first non-orthologous sequence - C.hominis:84 P.jiroveci:84

Q5CPC3              	100.00%		L0PE76              	100.00%
Bootstrap support for Q5CPC3 as seed ortholog is 100%.
Bootstrap support for L0PE76 as seed ortholog is 100%.

Group of orthologs #540. Best score 83 bits
Score difference with first non-orthologous sequence - C.hominis:83 P.jiroveci:83

Q5CFW8              	100.00%		L0P7D7              	100.00%
Bootstrap support for Q5CFW8 as seed ortholog is 100%.
Bootstrap support for L0P7D7 as seed ortholog is 100%.

Group of orthologs #541. Best score 83 bits
Score difference with first non-orthologous sequence - C.hominis:83 P.jiroveci:38

Q5CE59              	100.00%		L0PEV3              	100.00%
Bootstrap support for Q5CE59 as seed ortholog is 100%.
Bootstrap support for L0PEV3 as seed ortholog is 93%.

Group of orthologs #542. Best score 82 bits
Score difference with first non-orthologous sequence - C.hominis:82 P.jiroveci:82

Q5CFK2              	100.00%		L0PA83              	100.00%
Bootstrap support for Q5CFK2 as seed ortholog is 100%.
Bootstrap support for L0PA83 as seed ortholog is 100%.

Group of orthologs #543. Best score 82 bits
Score difference with first non-orthologous sequence - C.hominis:82 P.jiroveci:82

Q5CHY3              	100.00%		L0PD00              	100.00%
Bootstrap support for Q5CHY3 as seed ortholog is 100%.
Bootstrap support for L0PD00 as seed ortholog is 100%.

Group of orthologs #544. Best score 81 bits
Score difference with first non-orthologous sequence - C.hominis:81 P.jiroveci:81

Q5CII9              	100.00%		L0PE61              	100.00%
Q5CIJ0              	50.47%		
Bootstrap support for Q5CII9 as seed ortholog is 100%.
Bootstrap support for L0PE61 as seed ortholog is 100%.

Group of orthologs #545. Best score 81 bits
Score difference with first non-orthologous sequence - C.hominis:81 P.jiroveci:3

Q5CI30              	100.00%		L0PA43              	100.00%
Bootstrap support for Q5CI30 as seed ortholog is 100%.
Bootstrap support for L0PA43 as seed ortholog is 56%.
Alternative seed ortholog is L0PBQ7 (3 bits away from this cluster)

Group of orthologs #546. Best score 81 bits
Score difference with first non-orthologous sequence - C.hominis:81 P.jiroveci:81

Q5CJ07              	100.00%		L0P9C0              	100.00%
Bootstrap support for Q5CJ07 as seed ortholog is 100%.
Bootstrap support for L0P9C0 as seed ortholog is 100%.

Group of orthologs #547. Best score 81 bits
Score difference with first non-orthologous sequence - C.hominis:81 P.jiroveci:81

Q5CIH1              	100.00%		L0PAR2              	100.00%
Bootstrap support for Q5CIH1 as seed ortholog is 100%.
Bootstrap support for L0PAR2 as seed ortholog is 100%.

Group of orthologs #548. Best score 81 bits
Score difference with first non-orthologous sequence - C.hominis:81 P.jiroveci:81

Q5CH16              	100.00%		L0PFT5              	100.00%
Bootstrap support for Q5CH16 as seed ortholog is 100%.
Bootstrap support for L0PFT5 as seed ortholog is 100%.

Group of orthologs #549. Best score 81 bits
Score difference with first non-orthologous sequence - C.hominis:81 P.jiroveci:81

Q5CHI7              	100.00%		L0PGG1              	100.00%
Bootstrap support for Q5CHI7 as seed ortholog is 100%.
Bootstrap support for L0PGG1 as seed ortholog is 100%.

Group of orthologs #550. Best score 81 bits
Score difference with first non-orthologous sequence - C.hominis:81 P.jiroveci:81

Q5CKE8              	100.00%		L0PDZ3              	100.00%
Bootstrap support for Q5CKE8 as seed ortholog is 100%.
Bootstrap support for L0PDZ3 as seed ortholog is 100%.

Group of orthologs #551. Best score 80 bits
Score difference with first non-orthologous sequence - C.hominis:80 P.jiroveci:80

Q5CIT2              	100.00%		L0P733              	100.00%
Bootstrap support for Q5CIT2 as seed ortholog is 100%.
Bootstrap support for L0P733 as seed ortholog is 100%.

Group of orthologs #552. Best score 80 bits
Score difference with first non-orthologous sequence - C.hominis:80 P.jiroveci:80

Q5CMR2              	100.00%		L0P9U0              	100.00%
Bootstrap support for Q5CMR2 as seed ortholog is 100%.
Bootstrap support for L0P9U0 as seed ortholog is 100%.

Group of orthologs #553. Best score 80 bits
Score difference with first non-orthologous sequence - C.hominis:80 P.jiroveci:80

Q5CNC5              	100.00%		L0PB34              	100.00%
Bootstrap support for Q5CNC5 as seed ortholog is 100%.
Bootstrap support for L0PB34 as seed ortholog is 100%.

Group of orthologs #554. Best score 80 bits
Score difference with first non-orthologous sequence - C.hominis:80 P.jiroveci:80

Q5CNK8              	100.00%		L0PFY6              	100.00%
Bootstrap support for Q5CNK8 as seed ortholog is 100%.
Bootstrap support for L0PFY6 as seed ortholog is 100%.

Group of orthologs #555. Best score 79 bits
Score difference with first non-orthologous sequence - C.hominis:79 P.jiroveci:79

Q5CDS0              	100.00%		L0PE43              	100.00%
Bootstrap support for Q5CDS0 as seed ortholog is 100%.
Bootstrap support for L0PE43 as seed ortholog is 100%.

Group of orthologs #556. Best score 79 bits
Score difference with first non-orthologous sequence - C.hominis:79 P.jiroveci:79

Q5CG96              	100.00%		L0PDB2              	100.00%
Bootstrap support for Q5CG96 as seed ortholog is 100%.
Bootstrap support for L0PDB2 as seed ortholog is 100%.

Group of orthologs #557. Best score 79 bits
Score difference with first non-orthologous sequence - C.hominis:79 P.jiroveci:79

Q5CNF0              	100.00%		L0P7D0              	100.00%
Bootstrap support for Q5CNF0 as seed ortholog is 100%.
Bootstrap support for L0P7D0 as seed ortholog is 100%.

Group of orthologs #558. Best score 79 bits
Score difference with first non-orthologous sequence - C.hominis:4 P.jiroveci:79

Q5CNN1              	100.00%		L0PDN9              	100.00%
Bootstrap support for Q5CNN1 as seed ortholog is 61%.
Alternative seed ortholog is Q5CGW1 (4 bits away from this cluster)
Bootstrap support for L0PDN9 as seed ortholog is 100%.

Group of orthologs #559. Best score 79 bits
Score difference with first non-orthologous sequence - C.hominis:79 P.jiroveci:79

Q5CMQ8              	100.00%		L0PG87              	100.00%
Bootstrap support for Q5CMQ8 as seed ortholog is 100%.
Bootstrap support for L0PG87 as seed ortholog is 100%.

Group of orthologs #560. Best score 78 bits
Score difference with first non-orthologous sequence - C.hominis:78 P.jiroveci:78

Q5CL07              	100.00%		L0PD60              	100.00%
Bootstrap support for Q5CL07 as seed ortholog is 100%.
Bootstrap support for L0PD60 as seed ortholog is 100%.

Group of orthologs #561. Best score 77 bits
Score difference with first non-orthologous sequence - C.hominis:77 P.jiroveci:77

Q5CJ02              	100.00%		L0PFP4              	100.00%
Bootstrap support for Q5CJ02 as seed ortholog is 100%.
Bootstrap support for L0PFP4 as seed ortholog is 100%.

Group of orthologs #562. Best score 76 bits
Score difference with first non-orthologous sequence - C.hominis:76 P.jiroveci:76

Q5CIQ7              	100.00%		L0P8T9              	100.00%
Bootstrap support for Q5CIQ7 as seed ortholog is 100%.
Bootstrap support for L0P8T9 as seed ortholog is 100%.

Group of orthologs #563. Best score 76 bits
Score difference with first non-orthologous sequence - C.hominis:76 P.jiroveci:76

Q5CJJ6              	100.00%		L0PDX6              	100.00%
Bootstrap support for Q5CJJ6 as seed ortholog is 100%.
Bootstrap support for L0PDX6 as seed ortholog is 100%.

Group of orthologs #564. Best score 76 bits
Score difference with first non-orthologous sequence - C.hominis:76 P.jiroveci:76

Q5CMD2              	100.00%		L0PFT3              	100.00%
Bootstrap support for Q5CMD2 as seed ortholog is 100%.
Bootstrap support for L0PFT3 as seed ortholog is 100%.

Group of orthologs #565. Best score 76 bits
Score difference with first non-orthologous sequence - C.hominis:76 P.jiroveci:76

Q5CNX9              	100.00%		L0PFG2              	100.00%
Bootstrap support for Q5CNX9 as seed ortholog is 100%.
Bootstrap support for L0PFG2 as seed ortholog is 100%.

Group of orthologs #566. Best score 75 bits
Score difference with first non-orthologous sequence - C.hominis:75 P.jiroveci:75

Q5CE96              	100.00%		L0PFF4              	100.00%
Bootstrap support for Q5CE96 as seed ortholog is 100%.
Bootstrap support for L0PFF4 as seed ortholog is 100%.

Group of orthologs #567. Best score 75 bits
Score difference with first non-orthologous sequence - C.hominis:75 P.jiroveci:75

Q5CNP2              	100.00%		L0PGZ6              	100.00%
Bootstrap support for Q5CNP2 as seed ortholog is 100%.
Bootstrap support for L0PGZ6 as seed ortholog is 100%.

Group of orthologs #568. Best score 74 bits
Score difference with first non-orthologous sequence - C.hominis:74 P.jiroveci:74

Q5CHD8              	100.00%		L0P7V4              	100.00%
Bootstrap support for Q5CHD8 as seed ortholog is 100%.
Bootstrap support for L0P7V4 as seed ortholog is 100%.

Group of orthologs #569. Best score 74 bits
Score difference with first non-orthologous sequence - C.hominis:74 P.jiroveci:74

Q5CJB8              	100.00%		L0P9H0              	100.00%
Bootstrap support for Q5CJB8 as seed ortholog is 100%.
Bootstrap support for L0P9H0 as seed ortholog is 100%.

Group of orthologs #570. Best score 74 bits
Score difference with first non-orthologous sequence - C.hominis:74 P.jiroveci:74

Q5CGF3              	100.00%		L0PE35              	100.00%
Bootstrap support for Q5CGF3 as seed ortholog is 100%.
Bootstrap support for L0PE35 as seed ortholog is 100%.

Group of orthologs #571. Best score 74 bits
Score difference with first non-orthologous sequence - C.hominis:74 P.jiroveci:74

Q5CHU4              	100.00%		L0PE32              	100.00%
Bootstrap support for Q5CHU4 as seed ortholog is 100%.
Bootstrap support for L0PE32 as seed ortholog is 100%.

Group of orthologs #572. Best score 74 bits
Score difference with first non-orthologous sequence - C.hominis:74 P.jiroveci:74

Q5CJ44              	100.00%		L0PGK0              	100.00%
Bootstrap support for Q5CJ44 as seed ortholog is 100%.
Bootstrap support for L0PGK0 as seed ortholog is 100%.

Group of orthologs #573. Best score 73 bits
Score difference with first non-orthologous sequence - C.hominis:73 P.jiroveci:14

Q5CLQ1              	100.00%		L0PAN3              	100.00%
                    	       		L0PE81              	19.90%
Bootstrap support for Q5CLQ1 as seed ortholog is 100%.
Bootstrap support for L0PAN3 as seed ortholog is 68%.
Alternative seed ortholog is L0P7P7 (14 bits away from this cluster)

Group of orthologs #574. Best score 72 bits
Score difference with first non-orthologous sequence - C.hominis:72 P.jiroveci:72

Q5CEB5              	100.00%		L0P990              	100.00%
Bootstrap support for Q5CEB5 as seed ortholog is 100%.
Bootstrap support for L0P990 as seed ortholog is 100%.

Group of orthologs #575. Best score 72 bits
Score difference with first non-orthologous sequence - C.hominis:72 P.jiroveci:72

Q5CEM0              	100.00%		L0PB42              	100.00%
Bootstrap support for Q5CEM0 as seed ortholog is 100%.
Bootstrap support for L0PB42 as seed ortholog is 100%.

Group of orthologs #576. Best score 72 bits
Score difference with first non-orthologous sequence - C.hominis:72 P.jiroveci:72

Q5CI94              	100.00%		L0P9A5              	100.00%
Bootstrap support for Q5CI94 as seed ortholog is 100%.
Bootstrap support for L0P9A5 as seed ortholog is 100%.

Group of orthologs #577. Best score 72 bits
Score difference with first non-orthologous sequence - C.hominis:72 P.jiroveci:72

Q5CLL2              	100.00%		L0PEK7              	100.00%
Bootstrap support for Q5CLL2 as seed ortholog is 100%.
Bootstrap support for L0PEK7 as seed ortholog is 100%.

Group of orthologs #578. Best score 72 bits
Score difference with first non-orthologous sequence - C.hominis:72 P.jiroveci:72

Q5CM50              	100.00%		L0PF71              	100.00%
Bootstrap support for Q5CM50 as seed ortholog is 100%.
Bootstrap support for L0PF71 as seed ortholog is 100%.

Group of orthologs #579. Best score 71 bits
Score difference with first non-orthologous sequence - C.hominis:71 P.jiroveci:71

Q5CH71              	100.00%		L0PET3              	100.00%
Bootstrap support for Q5CH71 as seed ortholog is 100%.
Bootstrap support for L0PET3 as seed ortholog is 100%.

Group of orthologs #580. Best score 71 bits
Score difference with first non-orthologous sequence - C.hominis:71 P.jiroveci:71

Q5CJ29              	100.00%		L0PGF4              	100.00%
Bootstrap support for Q5CJ29 as seed ortholog is 100%.
Bootstrap support for L0PGF4 as seed ortholog is 100%.

Group of orthologs #581. Best score 71 bits
Score difference with first non-orthologous sequence - C.hominis:71 P.jiroveci:71

Q5CNS6              	100.00%		L0PDF0              	100.00%
Bootstrap support for Q5CNS6 as seed ortholog is 100%.
Bootstrap support for L0PDF0 as seed ortholog is 100%.

Group of orthologs #582. Best score 71 bits
Score difference with first non-orthologous sequence - C.hominis:71 P.jiroveci:71

Q5CNK4              	100.00%		L0PEF7              	100.00%
Bootstrap support for Q5CNK4 as seed ortholog is 100%.
Bootstrap support for L0PEF7 as seed ortholog is 100%.

Group of orthologs #583. Best score 71 bits
Score difference with first non-orthologous sequence - C.hominis:71 P.jiroveci:71

Q5CP44              	100.00%		L0PG84              	100.00%
Bootstrap support for Q5CP44 as seed ortholog is 100%.
Bootstrap support for L0PG84 as seed ortholog is 100%.

Group of orthologs #584. Best score 70 bits
Score difference with first non-orthologous sequence - C.hominis:70 P.jiroveci:70

Q5CFP5              	100.00%		L0PDN3              	100.00%
Bootstrap support for Q5CFP5 as seed ortholog is 100%.
Bootstrap support for L0PDN3 as seed ortholog is 100%.

Group of orthologs #585. Best score 70 bits
Score difference with first non-orthologous sequence - C.hominis:70 P.jiroveci:70

Q5CKU5              	100.00%		L0P9X3              	100.00%
Bootstrap support for Q5CKU5 as seed ortholog is 100%.
Bootstrap support for L0P9X3 as seed ortholog is 100%.

Group of orthologs #586. Best score 70 bits
Score difference with first non-orthologous sequence - C.hominis:70 P.jiroveci:70

Q5CNB7              	100.00%		L0P7C7              	100.00%
Bootstrap support for Q5CNB7 as seed ortholog is 100%.
Bootstrap support for L0P7C7 as seed ortholog is 100%.

Group of orthologs #587. Best score 70 bits
Score difference with first non-orthologous sequence - C.hominis:70 P.jiroveci:70

Q5CF54              	100.00%		L0PHI8              	100.00%
Bootstrap support for Q5CF54 as seed ortholog is 100%.
Bootstrap support for L0PHI8 as seed ortholog is 100%.

Group of orthologs #588. Best score 69 bits
Score difference with first non-orthologous sequence - C.hominis:69 P.jiroveci:69

Q5CIA4              	100.00%		L0P834              	100.00%
Bootstrap support for Q5CIA4 as seed ortholog is 100%.
Bootstrap support for L0P834 as seed ortholog is 100%.

Group of orthologs #589. Best score 69 bits
Score difference with first non-orthologous sequence - C.hominis:8 P.jiroveci:69

Q5CG74              	100.00%		L0PDG4              	100.00%
Bootstrap support for Q5CG74 as seed ortholog is 72%.
Alternative seed ortholog is Q5CJJ2 (8 bits away from this cluster)
Bootstrap support for L0PDG4 as seed ortholog is 100%.

Group of orthologs #590. Best score 69 bits
Score difference with first non-orthologous sequence - C.hominis:69 P.jiroveci:69

Q5CIV9              	100.00%		L0PCY1              	100.00%
Bootstrap support for Q5CIV9 as seed ortholog is 100%.
Bootstrap support for L0PCY1 as seed ortholog is 100%.

Group of orthologs #591. Best score 69 bits
Score difference with first non-orthologous sequence - C.hominis:69 P.jiroveci:69

Q5CJZ4              	100.00%		L0PFD1              	100.00%
Bootstrap support for Q5CJZ4 as seed ortholog is 100%.
Bootstrap support for L0PFD1 as seed ortholog is 100%.

Group of orthologs #592. Best score 69 bits
Score difference with first non-orthologous sequence - C.hominis:69 P.jiroveci:69

Q5CLW3              	100.00%		L0PFK1              	100.00%
Bootstrap support for Q5CLW3 as seed ortholog is 100%.
Bootstrap support for L0PFK1 as seed ortholog is 100%.

Group of orthologs #593. Best score 68 bits
Score difference with first non-orthologous sequence - C.hominis:68 P.jiroveci:68

Q5CF52              	100.00%		L0PAB2              	100.00%
Bootstrap support for Q5CF52 as seed ortholog is 100%.
Bootstrap support for L0PAB2 as seed ortholog is 100%.

Group of orthologs #594. Best score 68 bits
Score difference with first non-orthologous sequence - C.hominis:68 P.jiroveci:68

Q5CGZ3              	100.00%		L0PCX7              	100.00%
Bootstrap support for Q5CGZ3 as seed ortholog is 100%.
Bootstrap support for L0PCX7 as seed ortholog is 100%.

Group of orthologs #595. Best score 68 bits
Score difference with first non-orthologous sequence - C.hominis:68 P.jiroveci:4

Q5CL52              	100.00%		L0P903              	100.00%
Bootstrap support for Q5CL52 as seed ortholog is 100%.
Bootstrap support for L0P903 as seed ortholog is 44%.
Alternative seed ortholog is L0P8G6 (4 bits away from this cluster)

Group of orthologs #596. Best score 67 bits
Score difference with first non-orthologous sequence - C.hominis:67 P.jiroveci:67

Q5CMB9              	100.00%		L0PEB9              	100.00%
                    	       		L0PA79              	63.91%
Bootstrap support for Q5CMB9 as seed ortholog is 100%.
Bootstrap support for L0PEB9 as seed ortholog is 100%.

Group of orthologs #597. Best score 67 bits
Score difference with first non-orthologous sequence - C.hominis:67 P.jiroveci:67

Q5CGG8              	100.00%		L0PA37              	100.00%
Bootstrap support for Q5CGG8 as seed ortholog is 100%.
Bootstrap support for L0PA37 as seed ortholog is 100%.

Group of orthologs #598. Best score 67 bits
Score difference with first non-orthologous sequence - C.hominis:1 P.jiroveci:67

Q5CIJ6              	100.00%		L0P948              	100.00%
Bootstrap support for Q5CIJ6 as seed ortholog is 49%.
Alternative seed ortholog is Q5CI46 (1 bits away from this cluster)
Bootstrap support for L0P948 as seed ortholog is 100%.

Group of orthologs #599. Best score 67 bits
Score difference with first non-orthologous sequence - C.hominis:67 P.jiroveci:67

Q5CHS2              	100.00%		L0PFD4              	100.00%
Bootstrap support for Q5CHS2 as seed ortholog is 100%.
Bootstrap support for L0PFD4 as seed ortholog is 100%.

Group of orthologs #600. Best score 67 bits
Score difference with first non-orthologous sequence - C.hominis:67 P.jiroveci:67

Q5CME7              	100.00%		L0PAP8              	100.00%
Bootstrap support for Q5CME7 as seed ortholog is 100%.
Bootstrap support for L0PAP8 as seed ortholog is 100%.

Group of orthologs #601. Best score 67 bits
Score difference with first non-orthologous sequence - C.hominis:67 P.jiroveci:67

Q5CKZ6              	100.00%		L0PG35              	100.00%
Bootstrap support for Q5CKZ6 as seed ortholog is 100%.
Bootstrap support for L0PG35 as seed ortholog is 100%.

Group of orthologs #602. Best score 67 bits
Score difference with first non-orthologous sequence - C.hominis:67 P.jiroveci:67

Q5CP29              	100.00%		L0PDX2              	100.00%
Bootstrap support for Q5CP29 as seed ortholog is 100%.
Bootstrap support for L0PDX2 as seed ortholog is 100%.

Group of orthologs #603. Best score 66 bits
Score difference with first non-orthologous sequence - C.hominis:66 P.jiroveci:19

Q5CMZ5              	100.00%		L0PB40              	100.00%
Bootstrap support for Q5CMZ5 as seed ortholog is 100%.
Bootstrap support for L0PB40 as seed ortholog is 71%.
Alternative seed ortholog is L0P8G6 (19 bits away from this cluster)

Group of orthologs #604. Best score 65 bits
Score difference with first non-orthologous sequence - C.hominis:65 P.jiroveci:65

Q5CEG9              	100.00%		L0PCB5              	100.00%
Bootstrap support for Q5CEG9 as seed ortholog is 100%.
Bootstrap support for L0PCB5 as seed ortholog is 100%.

Group of orthologs #605. Best score 65 bits
Score difference with first non-orthologous sequence - C.hominis:65 P.jiroveci:65

Q5CFU2              	100.00%		L0PF05              	100.00%
Bootstrap support for Q5CFU2 as seed ortholog is 100%.
Bootstrap support for L0PF05 as seed ortholog is 100%.

Group of orthologs #606. Best score 65 bits
Score difference with first non-orthologous sequence - C.hominis:65 P.jiroveci:65

Q5CNR2              	100.00%		L0PG73              	100.00%
Bootstrap support for Q5CNR2 as seed ortholog is 100%.
Bootstrap support for L0PG73 as seed ortholog is 100%.

Group of orthologs #607. Best score 64 bits
Score difference with first non-orthologous sequence - C.hominis:64 P.jiroveci:17

Q5CM26              	100.00%		L0PBX5              	100.00%
Q5CF61              	12.40%		
Bootstrap support for Q5CM26 as seed ortholog is 100%.
Bootstrap support for L0PBX5 as seed ortholog is 57%.
Alternative seed ortholog is L0PB78 (17 bits away from this cluster)

Group of orthologs #608. Best score 64 bits
Score difference with first non-orthologous sequence - C.hominis:64 P.jiroveci:64

Q5CFS8              	100.00%		L0P7U6              	100.00%
Bootstrap support for Q5CFS8 as seed ortholog is 100%.
Bootstrap support for L0P7U6 as seed ortholog is 100%.

Group of orthologs #609. Best score 63 bits
Score difference with first non-orthologous sequence - C.hominis:63 P.jiroveci:63

Q5CK82              	100.00%		L0P8Y9              	100.00%
Bootstrap support for Q5CK82 as seed ortholog is 100%.
Bootstrap support for L0P8Y9 as seed ortholog is 100%.

Group of orthologs #610. Best score 63 bits
Score difference with first non-orthologous sequence - C.hominis:63 P.jiroveci:63

Q5CKP9              	100.00%		L0PBH8              	100.00%
Bootstrap support for Q5CKP9 as seed ortholog is 100%.
Bootstrap support for L0PBH8 as seed ortholog is 100%.

Group of orthologs #611. Best score 62 bits
Score difference with first non-orthologous sequence - C.hominis:62 P.jiroveci:14

Q5CNG2              	100.00%		L0PD48              	100.00%
                    	       		L0PGS1              	8.26%
Bootstrap support for Q5CNG2 as seed ortholog is 100%.
Bootstrap support for L0PD48 as seed ortholog is 67%.
Alternative seed ortholog is L0PGL7 (14 bits away from this cluster)

Group of orthologs #612. Best score 62 bits
Score difference with first non-orthologous sequence - C.hominis:62 P.jiroveci:62

Q5CKN7              	100.00%		L0PBL9              	100.00%
Bootstrap support for Q5CKN7 as seed ortholog is 100%.
Bootstrap support for L0PBL9 as seed ortholog is 100%.

Group of orthologs #613. Best score 62 bits
Score difference with first non-orthologous sequence - C.hominis:8 P.jiroveci:4

Q5CMT6              	100.00%		L0PBC8              	100.00%
Bootstrap support for Q5CMT6 as seed ortholog is 62%.
Alternative seed ortholog is Q5CKC9 (8 bits away from this cluster)
Bootstrap support for L0PBC8 as seed ortholog is 57%.
Alternative seed ortholog is L0PFJ7 (4 bits away from this cluster)

Group of orthologs #614. Best score 61 bits
Score difference with first non-orthologous sequence - C.hominis:61 P.jiroveci:61

Q5CG72              	100.00%		L0P9W7              	100.00%
Bootstrap support for Q5CG72 as seed ortholog is 100%.
Bootstrap support for L0P9W7 as seed ortholog is 100%.

Group of orthologs #615. Best score 61 bits
Score difference with first non-orthologous sequence - C.hominis:61 P.jiroveci:61

Q5CEW2              	100.00%		L0PG39              	100.00%
Bootstrap support for Q5CEW2 as seed ortholog is 100%.
Bootstrap support for L0PG39 as seed ortholog is 100%.

Group of orthologs #616. Best score 61 bits
Score difference with first non-orthologous sequence - C.hominis:61 P.jiroveci:61

Q5CEY2              	100.00%		L0PHM1              	100.00%
Bootstrap support for Q5CEY2 as seed ortholog is 100%.
Bootstrap support for L0PHM1 as seed ortholog is 100%.

Group of orthologs #617. Best score 59 bits
Score difference with first non-orthologous sequence - C.hominis:59 P.jiroveci:59

Q5CEL9              	100.00%		L0PCX3              	100.00%
Bootstrap support for Q5CEL9 as seed ortholog is 100%.
Bootstrap support for L0PCX3 as seed ortholog is 100%.

Group of orthologs #618. Best score 59 bits
Score difference with first non-orthologous sequence - C.hominis:59 P.jiroveci:59

Q5CGZ2              	100.00%		L0PEN4              	100.00%
Bootstrap support for Q5CGZ2 as seed ortholog is 100%.
Bootstrap support for L0PEN4 as seed ortholog is 100%.

Group of orthologs #619. Best score 59 bits
Score difference with first non-orthologous sequence - C.hominis:59 P.jiroveci:59

Q5CPB7              	100.00%		L0P9R5              	100.00%
Bootstrap support for Q5CPB7 as seed ortholog is 100%.
Bootstrap support for L0P9R5 as seed ortholog is 100%.

Group of orthologs #620. Best score 58 bits
Score difference with first non-orthologous sequence - C.hominis:58 P.jiroveci:58

Q5CJ20              	100.00%		L0PF86              	100.00%
                    	       		L0PC10              	87.99%
Bootstrap support for Q5CJ20 as seed ortholog is 100%.
Bootstrap support for L0PF86 as seed ortholog is 100%.

Group of orthologs #621. Best score 58 bits
Score difference with first non-orthologous sequence - C.hominis:2 P.jiroveci:58

Q5CE44              	100.00%		L0P9T6              	100.00%
Bootstrap support for Q5CE44 as seed ortholog is 53%.
Alternative seed ortholog is Q5CM01 (2 bits away from this cluster)
Bootstrap support for L0P9T6 as seed ortholog is 100%.

Group of orthologs #622. Best score 58 bits
Score difference with first non-orthologous sequence - C.hominis:58 P.jiroveci:10

Q5CH58              	100.00%		L0P9I9              	100.00%
Bootstrap support for Q5CH58 as seed ortholog is 100%.
Bootstrap support for L0P9I9 as seed ortholog is 77%.

Group of orthologs #623. Best score 58 bits
Score difference with first non-orthologous sequence - C.hominis:58 P.jiroveci:58

Q5CHC6              	100.00%		L0PCR0              	100.00%
Bootstrap support for Q5CHC6 as seed ortholog is 100%.
Bootstrap support for L0PCR0 as seed ortholog is 100%.

Group of orthologs #624. Best score 57 bits
Score difference with first non-orthologous sequence - C.hominis:57 P.jiroveci:57

Q5CF39              	100.00%		L0PA76              	100.00%
Q5CJV2              	8.98%		
Bootstrap support for Q5CF39 as seed ortholog is 100%.
Bootstrap support for L0PA76 as seed ortholog is 100%.

Group of orthologs #625. Best score 57 bits
Score difference with first non-orthologous sequence - C.hominis:57 P.jiroveci:57

Q5CH68              	100.00%		L0PDA4              	100.00%
Bootstrap support for Q5CH68 as seed ortholog is 100%.
Bootstrap support for L0PDA4 as seed ortholog is 100%.

Group of orthologs #626. Best score 57 bits
Score difference with first non-orthologous sequence - C.hominis:57 P.jiroveci:57

Q5CFG7              	100.00%		L0PFP3              	100.00%
Bootstrap support for Q5CFG7 as seed ortholog is 100%.
Bootstrap support for L0PFP3 as seed ortholog is 100%.

Group of orthologs #627. Best score 57 bits
Score difference with first non-orthologous sequence - C.hominis:57 P.jiroveci:57

Q5CMM4              	100.00%		L0PEC4              	100.00%
Bootstrap support for Q5CMM4 as seed ortholog is 100%.
Bootstrap support for L0PEC4 as seed ortholog is 100%.

Group of orthologs #628. Best score 56 bits
Score difference with first non-orthologous sequence - C.hominis:56 P.jiroveci:56

Q5CDU9              	100.00%		L0PGM7              	100.00%
                    	       		L0PGY6              	100.00%
Bootstrap support for Q5CDU9 as seed ortholog is 100%.
Bootstrap support for L0PGM7 as seed ortholog is 100%.
Bootstrap support for L0PGY6 as seed ortholog is 100%.

Group of orthologs #629. Best score 56 bits
Score difference with first non-orthologous sequence - C.hominis:56 P.jiroveci:56

Q5CDF3              	100.00%		L0P7K1              	100.00%
Bootstrap support for Q5CDF3 as seed ortholog is 100%.
Bootstrap support for L0P7K1 as seed ortholog is 100%.

Group of orthologs #630. Best score 56 bits
Score difference with first non-orthologous sequence - C.hominis:56 P.jiroveci:56

Q5CHA6              	100.00%		L0PAJ4              	100.00%
Bootstrap support for Q5CHA6 as seed ortholog is 100%.
Bootstrap support for L0PAJ4 as seed ortholog is 100%.

Group of orthologs #631. Best score 56 bits
Score difference with first non-orthologous sequence - C.hominis:56 P.jiroveci:56

Q5CNR7              	100.00%		L0PGA4              	100.00%
Bootstrap support for Q5CNR7 as seed ortholog is 100%.
Bootstrap support for L0PGA4 as seed ortholog is 100%.

Group of orthologs #632. Best score 55 bits
Score difference with first non-orthologous sequence - C.hominis:55 P.jiroveci:55

Q5CDS1              	100.00%		L0PFE6              	100.00%
Bootstrap support for Q5CDS1 as seed ortholog is 100%.
Bootstrap support for L0PFE6 as seed ortholog is 100%.

Group of orthologs #633. Best score 55 bits
Score difference with first non-orthologous sequence - C.hominis:55 P.jiroveci:55

Q5CL55              	100.00%		L0PAM9              	100.00%
Bootstrap support for Q5CL55 as seed ortholog is 100%.
Bootstrap support for L0PAM9 as seed ortholog is 100%.

Group of orthologs #634. Best score 54 bits
Score difference with first non-orthologous sequence - C.hominis:54 P.jiroveci:54

Q5CF40              	100.00%		L0PCP9              	100.00%
Bootstrap support for Q5CF40 as seed ortholog is 100%.
Bootstrap support for L0PCP9 as seed ortholog is 100%.

Group of orthologs #635. Best score 54 bits
Score difference with first non-orthologous sequence - C.hominis:54 P.jiroveci:54

Q5CFU6              	100.00%		L0PCQ6              	100.00%
Bootstrap support for Q5CFU6 as seed ortholog is 100%.
Bootstrap support for L0PCQ6 as seed ortholog is 100%.

Group of orthologs #636. Best score 54 bits
Score difference with first non-orthologous sequence - C.hominis:54 P.jiroveci:54

Q5CDR1              	100.00%		L0PF02              	100.00%
Bootstrap support for Q5CDR1 as seed ortholog is 100%.
Bootstrap support for L0PF02 as seed ortholog is 100%.

Group of orthologs #637. Best score 53 bits
Score difference with first non-orthologous sequence - C.hominis:53 P.jiroveci:53

Q5CL01              	100.00%		L0PCX6              	100.00%
Bootstrap support for Q5CL01 as seed ortholog is 100%.
Bootstrap support for L0PCX6 as seed ortholog is 100%.

Group of orthologs #638. Best score 53 bits
Score difference with first non-orthologous sequence - C.hominis:53 P.jiroveci:53

Q5CLJ8              	100.00%		L0PGG4              	100.00%
Bootstrap support for Q5CLJ8 as seed ortholog is 100%.
Bootstrap support for L0PGG4 as seed ortholog is 100%.

Group of orthologs #639. Best score 52 bits
Score difference with first non-orthologous sequence - C.hominis:9 P.jiroveci:52

Q5CHT0              	100.00%		L0P9A7              	100.00%
Bootstrap support for Q5CHT0 as seed ortholog is 68%.
Alternative seed ortholog is Q5CME6 (9 bits away from this cluster)
Bootstrap support for L0P9A7 as seed ortholog is 100%.

Group of orthologs #640. Best score 51 bits
Score difference with first non-orthologous sequence - C.hominis:51 P.jiroveci:51

Q5CEH5              	100.00%		L0P881              	100.00%
Bootstrap support for Q5CEH5 as seed ortholog is 100%.
Bootstrap support for L0P881 as seed ortholog is 100%.

Group of orthologs #641. Best score 51 bits
Score difference with first non-orthologous sequence - C.hominis:51 P.jiroveci:51

Q5CFW6              	100.00%		L0PC89              	100.00%
Bootstrap support for Q5CFW6 as seed ortholog is 100%.
Bootstrap support for L0PC89 as seed ortholog is 100%.

Group of orthologs #642. Best score 50 bits
Score difference with first non-orthologous sequence - C.hominis:50 P.jiroveci:50

Q5CFL2              	100.00%		L0PFU9              	100.00%
Bootstrap support for Q5CFL2 as seed ortholog is 100%.
Bootstrap support for L0PFU9 as seed ortholog is 100%.

Group of orthologs #643. Best score 49 bits
Score difference with first non-orthologous sequence - C.hominis:49 P.jiroveci:49

Q5CJI9              	100.00%		L0PAE4              	100.00%
Bootstrap support for Q5CJI9 as seed ortholog is 100%.
Bootstrap support for L0PAE4 as seed ortholog is 100%.

Group of orthologs #644. Best score 49 bits
Score difference with first non-orthologous sequence - C.hominis:49 P.jiroveci:49

Q5CJ85              	100.00%		L0PBL1              	100.00%
Bootstrap support for Q5CJ85 as seed ortholog is 100%.
Bootstrap support for L0PBL1 as seed ortholog is 100%.

Group of orthologs #645. Best score 49 bits
Score difference with first non-orthologous sequence - C.hominis:49 P.jiroveci:49

Q5CFT6              	100.00%		L0PFF3              	100.00%
Bootstrap support for Q5CFT6 as seed ortholog is 100%.
Bootstrap support for L0PFF3 as seed ortholog is 100%.

Group of orthologs #646. Best score 49 bits
Score difference with first non-orthologous sequence - C.hominis:49 P.jiroveci:49

Q5CNZ7              	100.00%		L0PA11              	100.00%
Bootstrap support for Q5CNZ7 as seed ortholog is 100%.
Bootstrap support for L0PA11 as seed ortholog is 100%.

Group of orthologs #647. Best score 49 bits
Score difference with first non-orthologous sequence - C.hominis:49 P.jiroveci:49

Q5CP80              	100.00%		L0PE14              	100.00%
Bootstrap support for Q5CP80 as seed ortholog is 100%.
Bootstrap support for L0PE14 as seed ortholog is 100%.

Group of orthologs #648. Best score 49 bits
Score difference with first non-orthologous sequence - C.hominis:49 P.jiroveci:49

Q5CNU2              	100.00%		L0PFA1              	100.00%
Bootstrap support for Q5CNU2 as seed ortholog is 100%.
Bootstrap support for L0PFA1 as seed ortholog is 100%.

Group of orthologs #649. Best score 48 bits
Score difference with first non-orthologous sequence - C.hominis:48 P.jiroveci:48

Q5CHV4              	100.00%		L0PGZ1              	100.00%
                    	       		L0PGM3              	87.90%
Bootstrap support for Q5CHV4 as seed ortholog is 100%.
Bootstrap support for L0PGZ1 as seed ortholog is 100%.

Group of orthologs #650. Best score 47 bits
Score difference with first non-orthologous sequence - C.hominis:47 P.jiroveci:47

Q5CDH7              	100.00%		L0PAT3              	100.00%
Bootstrap support for Q5CDH7 as seed ortholog is 100%.
Bootstrap support for L0PAT3 as seed ortholog is 100%.

Group of orthologs #651. Best score 47 bits
Score difference with first non-orthologous sequence - C.hominis:47 P.jiroveci:47

Q5CJ59              	100.00%		L0PEH0              	100.00%
Bootstrap support for Q5CJ59 as seed ortholog is 100%.
Bootstrap support for L0PEH0 as seed ortholog is 100%.

Group of orthologs #652. Best score 47 bits
Score difference with first non-orthologous sequence - C.hominis:47 P.jiroveci:47

Q5CJP7              	100.00%		L0PFV5              	100.00%
Bootstrap support for Q5CJP7 as seed ortholog is 100%.
Bootstrap support for L0PFV5 as seed ortholog is 100%.

Group of orthologs #653. Best score 46 bits
Score difference with first non-orthologous sequence - C.hominis:46 P.jiroveci:46

Q5CJG6              	100.00%		L0P816              	100.00%
Bootstrap support for Q5CJG6 as seed ortholog is 100%.
Bootstrap support for L0P816 as seed ortholog is 100%.

Group of orthologs #654. Best score 44 bits
Score difference with first non-orthologous sequence - C.hominis:44 P.jiroveci:44

Q5CEC8              	100.00%		L0P7T7              	100.00%
Bootstrap support for Q5CEC8 as seed ortholog is 100%.
Bootstrap support for L0P7T7 as seed ortholog is 100%.

Group of orthologs #655. Best score 44 bits
Score difference with first non-orthologous sequence - C.hominis:44 P.jiroveci:44

Q5CJW7              	100.00%		L0PA67              	100.00%
Bootstrap support for Q5CJW7 as seed ortholog is 100%.
Bootstrap support for L0PA67 as seed ortholog is 100%.

Group of orthologs #656. Best score 44 bits
Score difference with first non-orthologous sequence - C.hominis:44 P.jiroveci:44

Q5CNW4              	100.00%		L0PAH1              	100.00%
Bootstrap support for Q5CNW4 as seed ortholog is 100%.
Bootstrap support for L0PAH1 as seed ortholog is 100%.

Group of orthologs #657. Best score 43 bits
Score difference with first non-orthologous sequence - C.hominis:43 P.jiroveci:43

Q5CKR9              	100.00%		L0P9A1              	100.00%
Bootstrap support for Q5CKR9 as seed ortholog is 100%.
Bootstrap support for L0P9A1 as seed ortholog is 100%.

Group of orthologs #658. Best score 43 bits
Score difference with first non-orthologous sequence - C.hominis:43 P.jiroveci:43

Q5CK48              	100.00%		L0PCI2              	100.00%
Bootstrap support for Q5CK48 as seed ortholog is 100%.
Bootstrap support for L0PCI2 as seed ortholog is 100%.

Group of orthologs #659. Best score 42 bits
Score difference with first non-orthologous sequence - C.hominis:42 P.jiroveci:42

Q5CHS3              	100.00%		L0PD85              	100.00%
                    	       		L0PGV7              	64.54%
Bootstrap support for Q5CHS3 as seed ortholog is 100%.
Bootstrap support for L0PD85 as seed ortholog is 100%.

Group of orthologs #660. Best score 42 bits
Score difference with first non-orthologous sequence - C.hominis:42 P.jiroveci:42

Q5CDL6              	100.00%		L0P7E3              	100.00%
Bootstrap support for Q5CDL6 as seed ortholog is 100%.
Bootstrap support for L0P7E3 as seed ortholog is 100%.

Group of orthologs #661. Best score 42 bits
Score difference with first non-orthologous sequence - C.hominis:42 P.jiroveci:42

Q5CNZ5              	100.00%		L0P938              	100.00%
Bootstrap support for Q5CNZ5 as seed ortholog is 100%.
Bootstrap support for L0P938 as seed ortholog is 100%.

Group of orthologs #662. Best score 42 bits
Score difference with first non-orthologous sequence - C.hominis:42 P.jiroveci:42

Q5CMD3              	100.00%		L0PFF8              	100.00%
Bootstrap support for Q5CMD3 as seed ortholog is 100%.
Bootstrap support for L0PFF8 as seed ortholog is 100%.