###################################
2110 groups of orthologs
2277 in-paralogs from C.immitis
3038 in-paralogs from P.ramorum
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 3563 bits
Score difference with first non-orthologous sequence - C.immitis:3563 P.ramorum:3563

J3KE84              	100.00%		H3G8I9              	100.00%
Bootstrap support for J3KE84 as seed ortholog is 100%.
Bootstrap support for H3G8I9 as seed ortholog is 100%.

Group of orthologs #2. Best score 3474 bits
Score difference with first non-orthologous sequence - C.immitis:3474 P.ramorum:2043

J3K2G8              	100.00%		H3GM82              	100.00%
Bootstrap support for J3K2G8 as seed ortholog is 100%.
Bootstrap support for H3GM82 as seed ortholog is 100%.

Group of orthologs #3. Best score 1848 bits
Score difference with first non-orthologous sequence - C.immitis:1848 P.ramorum:1848

J3KFX8              	100.00%		H3GJC4              	100.00%
Bootstrap support for J3KFX8 as seed ortholog is 100%.
Bootstrap support for H3GJC4 as seed ortholog is 100%.

Group of orthologs #4. Best score 1696 bits
Score difference with first non-orthologous sequence - C.immitis:547 P.ramorum:804

J3KL43              	100.00%		H3G6V1              	100.00%
Bootstrap support for J3KL43 as seed ortholog is 100%.
Bootstrap support for H3G6V1 as seed ortholog is 100%.

Group of orthologs #5. Best score 1668 bits
Score difference with first non-orthologous sequence - C.immitis:1668 P.ramorum:1668

J3KHY4              	100.00%		H3GWA7              	100.00%
Bootstrap support for J3KHY4 as seed ortholog is 100%.
Bootstrap support for H3GWA7 as seed ortholog is 100%.

Group of orthologs #6. Best score 1656 bits
Score difference with first non-orthologous sequence - C.immitis:1656 P.ramorum:18

J3KDR3              	100.00%		H3G802              	100.00%
Bootstrap support for J3KDR3 as seed ortholog is 100%.
Bootstrap support for H3G802 as seed ortholog is 96%.

Group of orthologs #7. Best score 1655 bits
Score difference with first non-orthologous sequence - C.immitis:1655 P.ramorum:1655

J3KB55              	100.00%		H3GA78              	100.00%
Bootstrap support for J3KB55 as seed ortholog is 100%.
Bootstrap support for H3GA78 as seed ortholog is 100%.

Group of orthologs #8. Best score 1593 bits
Score difference with first non-orthologous sequence - C.immitis:469 P.ramorum:32

J3K0W1              	100.00%		H3G6H0              	100.00%
Bootstrap support for J3K0W1 as seed ortholog is 100%.
Bootstrap support for H3G6H0 as seed ortholog is 65%.
Alternative seed ortholog is H3GA51 (32 bits away from this cluster)

Group of orthologs #9. Best score 1537 bits
Score difference with first non-orthologous sequence - C.immitis:1537 P.ramorum:1537

J3K0E8              	100.00%		H3G958              	100.00%
Bootstrap support for J3K0E8 as seed ortholog is 100%.
Bootstrap support for H3G958 as seed ortholog is 100%.

Group of orthologs #10. Best score 1490 bits
Score difference with first non-orthologous sequence - C.immitis:1490 P.ramorum:1490

J3KLW0              	100.00%		H3GNE8              	100.00%
Bootstrap support for J3KLW0 as seed ortholog is 100%.
Bootstrap support for H3GNE8 as seed ortholog is 100%.

Group of orthologs #11. Best score 1383 bits
Score difference with first non-orthologous sequence - C.immitis:1383 P.ramorum:1383

J0HGE5              	100.00%		H3G976              	100.00%
Bootstrap support for J0HGE5 as seed ortholog is 100%.
Bootstrap support for H3G976 as seed ortholog is 100%.

Group of orthologs #12. Best score 1381 bits
Score difference with first non-orthologous sequence - C.immitis:1381 P.ramorum:1381

J3KKJ9              	100.00%		H3G7C4              	100.00%
Bootstrap support for J3KKJ9 as seed ortholog is 100%.
Bootstrap support for H3G7C4 as seed ortholog is 100%.

Group of orthologs #13. Best score 1355 bits
Score difference with first non-orthologous sequence - C.immitis:1355 P.ramorum:1175

J3K4V5              	100.00%		H3GA07              	100.00%
Bootstrap support for J3K4V5 as seed ortholog is 100%.
Bootstrap support for H3GA07 as seed ortholog is 100%.

Group of orthologs #14. Best score 1309 bits
Score difference with first non-orthologous sequence - C.immitis:1309 P.ramorum:1309

J3K8D2              	100.00%		H3G9F7              	100.00%
Bootstrap support for J3K8D2 as seed ortholog is 100%.
Bootstrap support for H3G9F7 as seed ortholog is 100%.

Group of orthologs #15. Best score 1282 bits
Score difference with first non-orthologous sequence - C.immitis:1282 P.ramorum:1282

J3K6Z9              	100.00%		H3G8F7              	100.00%
Bootstrap support for J3K6Z9 as seed ortholog is 100%.
Bootstrap support for H3G8F7 as seed ortholog is 100%.

Group of orthologs #16. Best score 1276 bits
Score difference with first non-orthologous sequence - C.immitis:835 P.ramorum:721

J3KHR5              	100.00%		H3G987              	100.00%
Bootstrap support for J3KHR5 as seed ortholog is 100%.
Bootstrap support for H3G987 as seed ortholog is 100%.

Group of orthologs #17. Best score 1265 bits
Score difference with first non-orthologous sequence - C.immitis:1265 P.ramorum:1265

J3K682              	100.00%		H3GFV5              	100.00%
                    	       		H3GFG1              	84.98%
                    	       		H3H6B1              	50.60%
Bootstrap support for J3K682 as seed ortholog is 100%.
Bootstrap support for H3GFV5 as seed ortholog is 100%.

Group of orthologs #18. Best score 1248 bits
Score difference with first non-orthologous sequence - C.immitis:1248 P.ramorum:1248

J3KI95              	100.00%		H3GAQ5              	100.00%
Bootstrap support for J3KI95 as seed ortholog is 100%.
Bootstrap support for H3GAQ5 as seed ortholog is 100%.

Group of orthologs #19. Best score 1227 bits
Score difference with first non-orthologous sequence - C.immitis:881 P.ramorum:837

J3K0E9              	100.00%		H3G968              	100.00%
Bootstrap support for J3K0E9 as seed ortholog is 100%.
Bootstrap support for H3G968 as seed ortholog is 100%.

Group of orthologs #20. Best score 1142 bits
Score difference with first non-orthologous sequence - C.immitis:1142 P.ramorum:228

J3KAE2              	100.00%		H3G7M6              	100.00%
Bootstrap support for J3KAE2 as seed ortholog is 100%.
Bootstrap support for H3G7M6 as seed ortholog is 99%.

Group of orthologs #21. Best score 1109 bits
Score difference with first non-orthologous sequence - C.immitis:1109 P.ramorum:972

I9NNK7              	100.00%		H3G8I7              	100.00%
Bootstrap support for I9NNK7 as seed ortholog is 100%.
Bootstrap support for H3G8I7 as seed ortholog is 100%.

Group of orthologs #22. Best score 1093 bits
Score difference with first non-orthologous sequence - C.immitis:1093 P.ramorum:1093

J3KBI0              	100.00%		H3H1S7              	100.00%
Bootstrap support for J3KBI0 as seed ortholog is 100%.
Bootstrap support for H3H1S7 as seed ortholog is 100%.

Group of orthologs #23. Best score 1083 bits
Score difference with first non-orthologous sequence - C.immitis:751 P.ramorum:594

J3K309              	100.00%		H3G7S3              	100.00%
Bootstrap support for J3K309 as seed ortholog is 100%.
Bootstrap support for H3G7S3 as seed ortholog is 100%.

Group of orthologs #24. Best score 1082 bits
Score difference with first non-orthologous sequence - C.immitis:1082 P.ramorum:1082

J3KD77              	100.00%		H3GA16              	100.00%
Bootstrap support for J3KD77 as seed ortholog is 100%.
Bootstrap support for H3GA16 as seed ortholog is 100%.

Group of orthologs #25. Best score 1073 bits
Score difference with first non-orthologous sequence - C.immitis:1073 P.ramorum:1073

J0HFN9              	100.00%		H3H4G0              	100.00%
J3K6F6              	10.81%		
Bootstrap support for J0HFN9 as seed ortholog is 100%.
Bootstrap support for H3H4G0 as seed ortholog is 100%.

Group of orthologs #26. Best score 1067 bits
Score difference with first non-orthologous sequence - C.immitis:1067 P.ramorum:1067

J3KBI8              	100.00%		H3GHV1              	100.00%
Bootstrap support for J3KBI8 as seed ortholog is 100%.
Bootstrap support for H3GHV1 as seed ortholog is 100%.

Group of orthologs #27. Best score 1043 bits
Score difference with first non-orthologous sequence - C.immitis:1043 P.ramorum:1043

J3K9Q8              	100.00%		H3G5R3              	100.00%
Bootstrap support for J3K9Q8 as seed ortholog is 100%.
Bootstrap support for H3G5R3 as seed ortholog is 100%.

Group of orthologs #28. Best score 1041 bits
Score difference with first non-orthologous sequence - C.immitis:1041 P.ramorum:1041

J3KEU9              	100.00%		H3G9W7              	100.00%
Bootstrap support for J3KEU9 as seed ortholog is 100%.
Bootstrap support for H3G9W7 as seed ortholog is 100%.

Group of orthologs #29. Best score 1034 bits
Score difference with first non-orthologous sequence - C.immitis:629 P.ramorum:543

J3KEC7              	100.00%		H3G7A2              	100.00%
Bootstrap support for J3KEC7 as seed ortholog is 100%.
Bootstrap support for H3G7A2 as seed ortholog is 100%.

Group of orthologs #30. Best score 1029 bits
Score difference with first non-orthologous sequence - C.immitis:1029 P.ramorum:906

J3KLB9              	100.00%		H3G917              	100.00%
Bootstrap support for J3KLB9 as seed ortholog is 100%.
Bootstrap support for H3G917 as seed ortholog is 100%.

Group of orthologs #31. Best score 1028 bits
Score difference with first non-orthologous sequence - C.immitis:1028 P.ramorum:1028

J3KJL0              	100.00%		H3GTK1              	100.00%
Bootstrap support for J3KJL0 as seed ortholog is 100%.
Bootstrap support for H3GTK1 as seed ortholog is 100%.

Group of orthologs #32. Best score 1013 bits
Score difference with first non-orthologous sequence - C.immitis:659 P.ramorum:1013

J3K366              	100.00%		H3GAM4              	100.00%
Bootstrap support for J3K366 as seed ortholog is 100%.
Bootstrap support for H3GAM4 as seed ortholog is 100%.

Group of orthologs #33. Best score 999 bits
Score difference with first non-orthologous sequence - C.immitis:999 P.ramorum:999

J0HGI4              	100.00%		H3G869              	100.00%
Bootstrap support for J0HGI4 as seed ortholog is 100%.
Bootstrap support for H3G869 as seed ortholog is 100%.

Group of orthologs #34. Best score 994 bits
Score difference with first non-orthologous sequence - C.immitis:994 P.ramorum:994

I9NPD7              	100.00%		H3G9Y5              	100.00%
Bootstrap support for I9NPD7 as seed ortholog is 100%.
Bootstrap support for H3G9Y5 as seed ortholog is 100%.

Group of orthologs #35. Best score 990 bits
Score difference with first non-orthologous sequence - C.immitis:165 P.ramorum:990

J3KK58              	100.00%		H3G9W6              	100.00%
Bootstrap support for J3KK58 as seed ortholog is 99%.
Bootstrap support for H3G9W6 as seed ortholog is 100%.

Group of orthologs #36. Best score 983 bits
Score difference with first non-orthologous sequence - C.immitis:983 P.ramorum:983

J3KGM0              	100.00%		H3GWL8              	100.00%
Bootstrap support for J3KGM0 as seed ortholog is 100%.
Bootstrap support for H3GWL8 as seed ortholog is 100%.

Group of orthologs #37. Best score 975 bits
Score difference with first non-orthologous sequence - C.immitis:975 P.ramorum:975

J3K3N9              	100.00%		H3GA87              	100.00%
Bootstrap support for J3K3N9 as seed ortholog is 100%.
Bootstrap support for H3GA87 as seed ortholog is 100%.

Group of orthologs #38. Best score 970 bits
Score difference with first non-orthologous sequence - C.immitis:277 P.ramorum:294

J3KLW5              	100.00%		H3GB49              	100.00%
                    	       		H3GB15              	80.79%
                    	       		H3G9G6              	27.74%
Bootstrap support for J3KLW5 as seed ortholog is 100%.
Bootstrap support for H3GB49 as seed ortholog is 100%.

Group of orthologs #39. Best score 953 bits
Score difference with first non-orthologous sequence - C.immitis:953 P.ramorum:953

J3K655              	100.00%		H3G8G6              	100.00%
Bootstrap support for J3K655 as seed ortholog is 100%.
Bootstrap support for H3G8G6 as seed ortholog is 100%.

Group of orthologs #40. Best score 938 bits
Score difference with first non-orthologous sequence - C.immitis:938 P.ramorum:938

J3KDC1              	100.00%		H3GEP5              	100.00%
                    	       		H3H7Q1              	96.47%
                    	       		H3G6A8              	31.27%
Bootstrap support for J3KDC1 as seed ortholog is 100%.
Bootstrap support for H3GEP5 as seed ortholog is 100%.

Group of orthologs #41. Best score 928 bits
Score difference with first non-orthologous sequence - C.immitis:928 P.ramorum:289

J0HEL4              	100.00%		H3G877              	100.00%
Bootstrap support for J0HEL4 as seed ortholog is 100%.
Bootstrap support for H3G877 as seed ortholog is 99%.

Group of orthologs #42. Best score 928 bits
Score difference with first non-orthologous sequence - C.immitis:499 P.ramorum:373

J3KI73              	100.00%		H3G922              	100.00%
Bootstrap support for J3KI73 as seed ortholog is 100%.
Bootstrap support for H3G922 as seed ortholog is 100%.

Group of orthologs #43. Best score 923 bits
Score difference with first non-orthologous sequence - C.immitis:682 P.ramorum:581

J3K3V7              	100.00%		H3G9P7              	100.00%
Bootstrap support for J3K3V7 as seed ortholog is 100%.
Bootstrap support for H3G9P7 as seed ortholog is 100%.

Group of orthologs #44. Best score 923 bits
Score difference with first non-orthologous sequence - C.immitis:923 P.ramorum:923

J3KIN9              	100.00%		H3G5P5              	100.00%
Bootstrap support for J3KIN9 as seed ortholog is 100%.
Bootstrap support for H3G5P5 as seed ortholog is 100%.

Group of orthologs #45. Best score 905 bits
Score difference with first non-orthologous sequence - C.immitis:905 P.ramorum:307

J3KEL0              	100.00%		H3G966              	100.00%
Bootstrap support for J3KEL0 as seed ortholog is 100%.
Bootstrap support for H3G966 as seed ortholog is 100%.

Group of orthologs #46. Best score 905 bits
Score difference with first non-orthologous sequence - C.immitis:905 P.ramorum:223

J3KJT8              	100.00%		H3GAB7              	100.00%
Bootstrap support for J3KJT8 as seed ortholog is 100%.
Bootstrap support for H3GAB7 as seed ortholog is 99%.

Group of orthologs #47. Best score 896 bits
Score difference with first non-orthologous sequence - C.immitis:896 P.ramorum:896

J3K4L9              	100.00%		H3G9M7              	100.00%
Bootstrap support for J3K4L9 as seed ortholog is 100%.
Bootstrap support for H3G9M7 as seed ortholog is 100%.

Group of orthologs #48. Best score 893 bits
Score difference with first non-orthologous sequence - C.immitis:893 P.ramorum:893

J3K584              	100.00%		H3G6H1              	100.00%
Bootstrap support for J3K584 as seed ortholog is 100%.
Bootstrap support for H3G6H1 as seed ortholog is 100%.

Group of orthologs #49. Best score 888 bits
Score difference with first non-orthologous sequence - C.immitis:54 P.ramorum:703

J3KLI4              	100.00%		H3GIQ9              	100.00%
Bootstrap support for J3KLI4 as seed ortholog is 89%.
Bootstrap support for H3GIQ9 as seed ortholog is 100%.

Group of orthologs #50. Best score 859 bits
Score difference with first non-orthologous sequence - C.immitis:59 P.ramorum:173

J3K833              	100.00%		H3GKM1              	100.00%
Bootstrap support for J3K833 as seed ortholog is 91%.
Bootstrap support for H3GKM1 as seed ortholog is 98%.

Group of orthologs #51. Best score 854 bits
Score difference with first non-orthologous sequence - C.immitis:854 P.ramorum:200

J3KL31              	100.00%		H3GAQ3              	100.00%
Bootstrap support for J3KL31 as seed ortholog is 100%.
Bootstrap support for H3GAQ3 as seed ortholog is 99%.

Group of orthologs #52. Best score 852 bits
Score difference with first non-orthologous sequence - C.immitis:852 P.ramorum:852

J3KKE0              	100.00%		H3G5Z2              	100.00%
Bootstrap support for J3KKE0 as seed ortholog is 100%.
Bootstrap support for H3G5Z2 as seed ortholog is 100%.

Group of orthologs #53. Best score 845 bits
Score difference with first non-orthologous sequence - C.immitis:180 P.ramorum:845

J3KB40              	100.00%		H3G875              	100.00%
Bootstrap support for J3KB40 as seed ortholog is 99%.
Bootstrap support for H3G875 as seed ortholog is 100%.

Group of orthologs #54. Best score 841 bits
Score difference with first non-orthologous sequence - C.immitis:759 P.ramorum:771

I9NSR7              	100.00%		H3G7J9              	100.00%
Bootstrap support for I9NSR7 as seed ortholog is 100%.
Bootstrap support for H3G7J9 as seed ortholog is 100%.

Group of orthologs #55. Best score 840 bits
Score difference with first non-orthologous sequence - C.immitis:840 P.ramorum:840

J3K532              	100.00%		H3G6X8              	100.00%
Bootstrap support for J3K532 as seed ortholog is 100%.
Bootstrap support for H3G6X8 as seed ortholog is 100%.

Group of orthologs #56. Best score 839 bits
Score difference with first non-orthologous sequence - C.immitis:839 P.ramorum:839

J3KFD1              	100.00%		H3GTR2              	100.00%
Bootstrap support for J3KFD1 as seed ortholog is 100%.
Bootstrap support for H3GTR2 as seed ortholog is 100%.

Group of orthologs #57. Best score 837 bits
Score difference with first non-orthologous sequence - C.immitis:837 P.ramorum:651

Q1DLM0              	100.00%		H3G9L2              	100.00%
Bootstrap support for Q1DLM0 as seed ortholog is 100%.
Bootstrap support for H3G9L2 as seed ortholog is 100%.

Group of orthologs #58. Best score 833 bits
Score difference with first non-orthologous sequence - C.immitis:731 P.ramorum:833

J3K6P7              	100.00%		H3GHV9              	100.00%
Bootstrap support for J3K6P7 as seed ortholog is 100%.
Bootstrap support for H3GHV9 as seed ortholog is 100%.

Group of orthologs #59. Best score 833 bits
Score difference with first non-orthologous sequence - C.immitis:833 P.ramorum:833

J3KDW6              	100.00%		H3GLZ7              	100.00%
Bootstrap support for J3KDW6 as seed ortholog is 100%.
Bootstrap support for H3GLZ7 as seed ortholog is 100%.

Group of orthologs #60. Best score 828 bits
Score difference with first non-orthologous sequence - C.immitis:225 P.ramorum:204

J3KIY6              	100.00%		H3G860              	100.00%
Bootstrap support for J3KIY6 as seed ortholog is 100%.
Bootstrap support for H3G860 as seed ortholog is 100%.

Group of orthologs #61. Best score 825 bits
Score difference with first non-orthologous sequence - C.immitis:83 P.ramorum:192

I9NNT8              	100.00%		H3GH83              	100.00%
Bootstrap support for I9NNT8 as seed ortholog is 94%.
Bootstrap support for H3GH83 as seed ortholog is 99%.

Group of orthologs #62. Best score 819 bits
Score difference with first non-orthologous sequence - C.immitis:819 P.ramorum:427

J3KLD6              	100.00%		H3G795              	100.00%
Bootstrap support for J3KLD6 as seed ortholog is 100%.
Bootstrap support for H3G795 as seed ortholog is 100%.

Group of orthologs #63. Best score 815 bits
Score difference with first non-orthologous sequence - C.immitis:815 P.ramorum:815

J3K5M3              	100.00%		H3G7B9              	100.00%
Bootstrap support for J3K5M3 as seed ortholog is 100%.
Bootstrap support for H3G7B9 as seed ortholog is 100%.

Group of orthologs #64. Best score 807 bits
Score difference with first non-orthologous sequence - C.immitis:403 P.ramorum:306

J3K2F2              	100.00%		H3G933              	100.00%
Bootstrap support for J3K2F2 as seed ortholog is 100%.
Bootstrap support for H3G933 as seed ortholog is 100%.

Group of orthologs #65. Best score 805 bits
Score difference with first non-orthologous sequence - C.immitis:199 P.ramorum:90

J3K857              	100.00%		H3G8G1              	100.00%
I9XJA2              	8.67%		
Bootstrap support for J3K857 as seed ortholog is 99%.
Bootstrap support for H3G8G1 as seed ortholog is 91%.

Group of orthologs #66. Best score 805 bits
Score difference with first non-orthologous sequence - C.immitis:805 P.ramorum:805

J3K0N8              	100.00%		H3GA27              	100.00%
Bootstrap support for J3K0N8 as seed ortholog is 100%.
Bootstrap support for H3GA27 as seed ortholog is 100%.

Group of orthologs #67. Best score 804 bits
Score difference with first non-orthologous sequence - C.immitis:804 P.ramorum:711

J3K8X7              	100.00%		H3GD86              	100.00%
Bootstrap support for J3K8X7 as seed ortholog is 100%.
Bootstrap support for H3GD86 as seed ortholog is 100%.

Group of orthologs #68. Best score 798 bits
Score difference with first non-orthologous sequence - C.immitis:585 P.ramorum:23

J3KHB1              	100.00%		H3GSL8              	100.00%
Bootstrap support for J3KHB1 as seed ortholog is 100%.
Bootstrap support for H3GSL8 as seed ortholog is 51%.
Alternative seed ortholog is H3GTJ9 (23 bits away from this cluster)

Group of orthologs #69. Best score 794 bits
Score difference with first non-orthologous sequence - C.immitis:794 P.ramorum:794

J3K4J5              	100.00%		H3G862              	100.00%
Bootstrap support for J3K4J5 as seed ortholog is 100%.
Bootstrap support for H3G862 as seed ortholog is 100%.

Group of orthologs #70. Best score 793 bits
Score difference with first non-orthologous sequence - C.immitis:793 P.ramorum:793

J3KAA3              	100.00%		H3H3C1              	100.00%
Bootstrap support for J3KAA3 as seed ortholog is 100%.
Bootstrap support for H3H3C1 as seed ortholog is 100%.

Group of orthologs #71. Best score 790 bits
Score difference with first non-orthologous sequence - C.immitis:790 P.ramorum:536

J3KBH9              	100.00%		H3G8C6              	100.00%
Bootstrap support for J3KBH9 as seed ortholog is 100%.
Bootstrap support for H3G8C6 as seed ortholog is 100%.

Group of orthologs #72. Best score 790 bits
Score difference with first non-orthologous sequence - C.immitis:790 P.ramorum:790

J3KIB8              	100.00%		H3GKT1              	100.00%
Bootstrap support for J3KIB8 as seed ortholog is 100%.
Bootstrap support for H3GKT1 as seed ortholog is 100%.

Group of orthologs #73. Best score 782 bits
Score difference with first non-orthologous sequence - C.immitis:782 P.ramorum:782

J3K2G2              	100.00%		H3G9B0              	100.00%
Bootstrap support for J3K2G2 as seed ortholog is 100%.
Bootstrap support for H3G9B0 as seed ortholog is 100%.

Group of orthologs #74. Best score 779 bits
Score difference with first non-orthologous sequence - C.immitis:779 P.ramorum:779

J3KI46              	100.00%		H3GZH1              	100.00%
Bootstrap support for J3KI46 as seed ortholog is 100%.
Bootstrap support for H3GZH1 as seed ortholog is 100%.

Group of orthologs #75. Best score 765 bits
Score difference with first non-orthologous sequence - C.immitis:274 P.ramorum:286

J3KDW8              	100.00%		H3G8C0              	100.00%
Bootstrap support for J3KDW8 as seed ortholog is 100%.
Bootstrap support for H3G8C0 as seed ortholog is 100%.

Group of orthologs #76. Best score 764 bits
Score difference with first non-orthologous sequence - C.immitis:764 P.ramorum:678

J3KK27              	100.00%		H3G7T4              	100.00%
Bootstrap support for J3KK27 as seed ortholog is 100%.
Bootstrap support for H3G7T4 as seed ortholog is 100%.

Group of orthologs #77. Best score 762 bits
Score difference with first non-orthologous sequence - C.immitis:762 P.ramorum:762

J3KFT2              	100.00%		H3HC97              	100.00%
Bootstrap support for J3KFT2 as seed ortholog is 100%.
Bootstrap support for H3HC97 as seed ortholog is 100%.

Group of orthologs #78. Best score 758 bits
Score difference with first non-orthologous sequence - C.immitis:125 P.ramorum:12

J3KHW9              	100.00%		H3GQ80              	100.00%
                    	       		H3G823              	25.34%
Bootstrap support for J3KHW9 as seed ortholog is 97%.
Bootstrap support for H3GQ80 as seed ortholog is 57%.
Alternative seed ortholog is H3GHA0 (12 bits away from this cluster)

Group of orthologs #79. Best score 754 bits
Score difference with first non-orthologous sequence - C.immitis:118 P.ramorum:754

J3K6M4              	100.00%		H3G777              	100.00%
                    	       		H3GB83              	67.02%
                    	       		H3H908              	40.90%
Bootstrap support for J3K6M4 as seed ortholog is 99%.
Bootstrap support for H3G777 as seed ortholog is 100%.

Group of orthologs #80. Best score 751 bits
Score difference with first non-orthologous sequence - C.immitis:751 P.ramorum:477

J3KIB2              	100.00%		H3GNJ5              	100.00%
Bootstrap support for J3KIB2 as seed ortholog is 100%.
Bootstrap support for H3GNJ5 as seed ortholog is 100%.

Group of orthologs #81. Best score 750 bits
Score difference with first non-orthologous sequence - C.immitis:750 P.ramorum:750

J3K8U1              	100.00%		H3G9D6              	100.00%
Bootstrap support for J3K8U1 as seed ortholog is 100%.
Bootstrap support for H3G9D6 as seed ortholog is 100%.

Group of orthologs #82. Best score 748 bits
Score difference with first non-orthologous sequence - C.immitis:604 P.ramorum:690

J3KJM0              	100.00%		H3GB63              	100.00%
                    	       		H3GAK4              	90.60%
                    	       		H3GAK3              	76.18%
                    	       		H3H1K9              	75.36%
Bootstrap support for J3KJM0 as seed ortholog is 100%.
Bootstrap support for H3GB63 as seed ortholog is 100%.

Group of orthologs #83. Best score 747 bits
Score difference with first non-orthologous sequence - C.immitis:747 P.ramorum:747

J3K1P2              	100.00%		H3G5U5              	100.00%
Bootstrap support for J3K1P2 as seed ortholog is 100%.
Bootstrap support for H3G5U5 as seed ortholog is 100%.

Group of orthologs #84. Best score 746 bits
Score difference with first non-orthologous sequence - C.immitis:746 P.ramorum:746

Q1DY01              	100.00%		H3G930              	100.00%
Bootstrap support for Q1DY01 as seed ortholog is 100%.
Bootstrap support for H3G930 as seed ortholog is 100%.

Group of orthologs #85. Best score 745 bits
Score difference with first non-orthologous sequence - C.immitis:745 P.ramorum:745

J3KAN7              	100.00%		H3G891              	100.00%
Bootstrap support for J3KAN7 as seed ortholog is 100%.
Bootstrap support for H3G891 as seed ortholog is 100%.

Group of orthologs #86. Best score 745 bits
Score difference with first non-orthologous sequence - C.immitis:389 P.ramorum:486

J3K9Z0              	100.00%		H3GAD7              	100.00%
Bootstrap support for J3K9Z0 as seed ortholog is 100%.
Bootstrap support for H3GAD7 as seed ortholog is 100%.

Group of orthologs #87. Best score 744 bits
Score difference with first non-orthologous sequence - C.immitis:648 P.ramorum:64

J3KG85              	100.00%		H3G6R8              	100.00%
Bootstrap support for J3KG85 as seed ortholog is 100%.
Bootstrap support for H3G6R8 as seed ortholog is 82%.

Group of orthologs #88. Best score 735 bits
Score difference with first non-orthologous sequence - C.immitis:735 P.ramorum:654

J3K9Z5              	100.00%		H3GTJ1              	100.00%
Bootstrap support for J3K9Z5 as seed ortholog is 100%.
Bootstrap support for H3GTJ1 as seed ortholog is 100%.

Group of orthologs #89. Best score 725 bits
Score difference with first non-orthologous sequence - C.immitis:725 P.ramorum:725

J3K0G9              	100.00%		H3G8E5              	100.00%
Bootstrap support for J3K0G9 as seed ortholog is 100%.
Bootstrap support for H3G8E5 as seed ortholog is 100%.

Group of orthologs #90. Best score 724 bits
Score difference with first non-orthologous sequence - C.immitis:724 P.ramorum:724

J3KJ34              	100.00%		H3G9K3              	100.00%
Bootstrap support for J3KJ34 as seed ortholog is 100%.
Bootstrap support for H3G9K3 as seed ortholog is 100%.

Group of orthologs #91. Best score 713 bits
Score difference with first non-orthologous sequence - C.immitis:487 P.ramorum:211

J3K7S5              	100.00%		H3G6X2              	100.00%
Bootstrap support for J3K7S5 as seed ortholog is 100%.
Bootstrap support for H3G6X2 as seed ortholog is 99%.

Group of orthologs #92. Best score 709 bits
Score difference with first non-orthologous sequence - C.immitis:501 P.ramorum:363

J3KID1              	100.00%		H3GAX1              	100.00%
Bootstrap support for J3KID1 as seed ortholog is 100%.
Bootstrap support for H3GAX1 as seed ortholog is 100%.

Group of orthologs #93. Best score 708 bits
Score difference with first non-orthologous sequence - C.immitis:708 P.ramorum:708

J3K8R9              	100.00%		H3GB02              	100.00%
Bootstrap support for J3K8R9 as seed ortholog is 100%.
Bootstrap support for H3GB02 as seed ortholog is 100%.

Group of orthologs #94. Best score 705 bits
Score difference with first non-orthologous sequence - C.immitis:705 P.ramorum:110

J3KL71              	100.00%		H3GBZ6              	100.00%
Bootstrap support for J3KL71 as seed ortholog is 100%.
Bootstrap support for H3GBZ6 as seed ortholog is 97%.

Group of orthologs #95. Best score 702 bits
Score difference with first non-orthologous sequence - C.immitis:702 P.ramorum:702

J3KFE2              	100.00%		H3GAT6              	100.00%
Bootstrap support for J3KFE2 as seed ortholog is 100%.
Bootstrap support for H3GAT6 as seed ortholog is 100%.

Group of orthologs #96. Best score 700 bits
Score difference with first non-orthologous sequence - C.immitis:700 P.ramorum:700

J3KBQ0              	100.00%		H3GB16              	100.00%
Bootstrap support for J3KBQ0 as seed ortholog is 100%.
Bootstrap support for H3GB16 as seed ortholog is 100%.

Group of orthologs #97. Best score 696 bits
Score difference with first non-orthologous sequence - C.immitis:696 P.ramorum:696

J3KF80              	100.00%		H3G6Q2              	100.00%
Bootstrap support for J3KF80 as seed ortholog is 100%.
Bootstrap support for H3G6Q2 as seed ortholog is 100%.

Group of orthologs #98. Best score 696 bits
Score difference with first non-orthologous sequence - C.immitis:696 P.ramorum:541

J3K5I9              	100.00%		H3GV59              	100.00%
Bootstrap support for J3K5I9 as seed ortholog is 100%.
Bootstrap support for H3GV59 as seed ortholog is 100%.

Group of orthologs #99. Best score 694 bits
Score difference with first non-orthologous sequence - C.immitis:694 P.ramorum:694

I9XK07              	100.00%		H3GAU9              	100.00%
Bootstrap support for I9XK07 as seed ortholog is 100%.
Bootstrap support for H3GAU9 as seed ortholog is 100%.

Group of orthologs #100. Best score 690 bits
Score difference with first non-orthologous sequence - C.immitis:111 P.ramorum:339

J3K4L6              	100.00%		H3GA38              	100.00%
Bootstrap support for J3K4L6 as seed ortholog is 99%.
Bootstrap support for H3GA38 as seed ortholog is 100%.

Group of orthologs #101. Best score 686 bits
Score difference with first non-orthologous sequence - C.immitis:47 P.ramorum:211

J3K8E4              	100.00%		H3G9Y4              	100.00%
                    	       		H3G7E9              	93.94%
                    	       		H3G9X9              	75.32%
                    	       		H3G7E7              	71.86%
                    	       		H3G9Y0              	68.83%
                    	       		H3GAV8              	56.71%
Bootstrap support for J3K8E4 as seed ortholog is 93%.
Bootstrap support for H3G9Y4 as seed ortholog is 100%.

Group of orthologs #102. Best score 686 bits
Score difference with first non-orthologous sequence - C.immitis:686 P.ramorum:612

I9NSR3              	100.00%		H3G9F8              	100.00%
Bootstrap support for I9NSR3 as seed ortholog is 100%.
Bootstrap support for H3G9F8 as seed ortholog is 100%.

Group of orthologs #103. Best score 678 bits
Score difference with first non-orthologous sequence - C.immitis:678 P.ramorum:602

Q96WZ1              	100.00%		H3G8M4              	100.00%
                    	       		H3G8L8              	99.07%
Bootstrap support for Q96WZ1 as seed ortholog is 100%.
Bootstrap support for H3G8M4 as seed ortholog is 100%.

Group of orthologs #104. Best score 678 bits
Score difference with first non-orthologous sequence - C.immitis:678 P.ramorum:678

J3K8C2              	100.00%		H3G9K5              	100.00%
Bootstrap support for J3K8C2 as seed ortholog is 100%.
Bootstrap support for H3G9K5 as seed ortholog is 100%.

Group of orthologs #105. Best score 676 bits
Score difference with first non-orthologous sequence - C.immitis:676 P.ramorum:676

J3K8C5              	100.00%		H3G9C4              	100.00%
Bootstrap support for J3K8C5 as seed ortholog is 100%.
Bootstrap support for H3G9C4 as seed ortholog is 100%.

Group of orthologs #106. Best score 674 bits
Score difference with first non-orthologous sequence - C.immitis:276 P.ramorum:11

J3K788              	100.00%		H3GXQ6              	100.00%
                    	       		H3GNA3              	19.54%
                    	       		H3GP37              	11.96%
                    	       		H3GFP8              	5.83%
                    	       		H3GVQ5              	5.38%
Bootstrap support for J3K788 as seed ortholog is 99%.
Bootstrap support for H3GXQ6 as seed ortholog is 40%.
Alternative seed ortholog is H3GHA0 (11 bits away from this cluster)

Group of orthologs #107. Best score 673 bits
Score difference with first non-orthologous sequence - C.immitis:497 P.ramorum:53

J3K9Y8              	100.00%		H3GRQ9              	100.00%
J3KCD7              	100.00%		H3GQ90              	100.00%
                    	       		H3G822              	9.46%
Bootstrap support for J3K9Y8 as seed ortholog is 100%.
Bootstrap support for J3KCD7 as seed ortholog is 100%.
Bootstrap support for H3GRQ9 as seed ortholog is 78%.
Bootstrap support for H3GQ90 as seed ortholog is 70%.
Alternative seed ortholog is H3G5Z1 (53 bits away from this cluster)

Group of orthologs #108. Best score 666 bits
Score difference with first non-orthologous sequence - C.immitis:666 P.ramorum:666

J3K114              	100.00%		H3G897              	100.00%
Bootstrap support for J3K114 as seed ortholog is 100%.
Bootstrap support for H3G897 as seed ortholog is 100%.

Group of orthologs #109. Best score 666 bits
Score difference with first non-orthologous sequence - C.immitis:666 P.ramorum:422

J3K490              	100.00%		H3G6K6              	100.00%
Bootstrap support for J3K490 as seed ortholog is 100%.
Bootstrap support for H3G6K6 as seed ortholog is 100%.

Group of orthologs #110. Best score 666 bits
Score difference with first non-orthologous sequence - C.immitis:666 P.ramorum:533

J3KBJ1              	100.00%		H3H0Y2              	100.00%
Bootstrap support for J3KBJ1 as seed ortholog is 100%.
Bootstrap support for H3H0Y2 as seed ortholog is 100%.

Group of orthologs #111. Best score 665 bits
Score difference with first non-orthologous sequence - C.immitis:665 P.ramorum:415

J3KG37              	100.00%		H3GAJ9              	100.00%
Bootstrap support for J3KG37 as seed ortholog is 100%.
Bootstrap support for H3GAJ9 as seed ortholog is 100%.

Group of orthologs #112. Best score 656 bits
Score difference with first non-orthologous sequence - C.immitis:495 P.ramorum:393

J3KA99              	100.00%		H3G9B9              	100.00%
                    	       		H3G9B8              	37.74%
Bootstrap support for J3KA99 as seed ortholog is 100%.
Bootstrap support for H3G9B9 as seed ortholog is 100%.

Group of orthologs #113. Best score 650 bits
Score difference with first non-orthologous sequence - C.immitis:650 P.ramorum:384

J3KF91              	100.00%		H3GAS2              	100.00%
Bootstrap support for J3KF91 as seed ortholog is 100%.
Bootstrap support for H3GAS2 as seed ortholog is 100%.

Group of orthologs #114. Best score 648 bits
Score difference with first non-orthologous sequence - C.immitis:648 P.ramorum:648

J3KGR5              	100.00%		H3G982              	100.00%
Bootstrap support for J3KGR5 as seed ortholog is 100%.
Bootstrap support for H3G982 as seed ortholog is 100%.

Group of orthologs #115. Best score 648 bits
Score difference with first non-orthologous sequence - C.immitis:648 P.ramorum:648

J3KKK4              	100.00%		H3G985              	100.00%
Bootstrap support for J3KKK4 as seed ortholog is 100%.
Bootstrap support for H3G985 as seed ortholog is 100%.

Group of orthologs #116. Best score 646 bits
Score difference with first non-orthologous sequence - C.immitis:495 P.ramorum:434

J3K9H3              	100.00%		H3G9Y1              	100.00%
Bootstrap support for J3K9H3 as seed ortholog is 100%.
Bootstrap support for H3G9Y1 as seed ortholog is 100%.

Group of orthologs #117. Best score 646 bits
Score difference with first non-orthologous sequence - C.immitis:646 P.ramorum:179

Q1DLP2              	100.00%		H3GHD9              	100.00%
Bootstrap support for Q1DLP2 as seed ortholog is 100%.
Bootstrap support for H3GHD9 as seed ortholog is 99%.

Group of orthologs #118. Best score 642 bits
Score difference with first non-orthologous sequence - C.immitis:642 P.ramorum:642

J3K2W0              	100.00%		H3G6U9              	100.00%
Bootstrap support for J3K2W0 as seed ortholog is 100%.
Bootstrap support for H3G6U9 as seed ortholog is 100%.

Group of orthologs #119. Best score 642 bits
Score difference with first non-orthologous sequence - C.immitis:642 P.ramorum:642

J3K2I3              	100.00%		H3G9H3              	100.00%
Bootstrap support for J3K2I3 as seed ortholog is 100%.
Bootstrap support for H3G9H3 as seed ortholog is 100%.

Group of orthologs #120. Best score 641 bits
Score difference with first non-orthologous sequence - C.immitis:641 P.ramorum:641

J3KJJ4              	100.00%		H3G8X0              	100.00%
Bootstrap support for J3KJJ4 as seed ortholog is 100%.
Bootstrap support for H3G8X0 as seed ortholog is 100%.

Group of orthologs #121. Best score 638 bits
Score difference with first non-orthologous sequence - C.immitis:638 P.ramorum:348

J3K9W6              	100.00%		H3G8S6              	100.00%
Bootstrap support for J3K9W6 as seed ortholog is 100%.
Bootstrap support for H3G8S6 as seed ortholog is 100%.

Group of orthologs #122. Best score 638 bits
Score difference with first non-orthologous sequence - C.immitis:638 P.ramorum:638

J3KBZ0              	100.00%		H3GUY1              	100.00%
Bootstrap support for J3KBZ0 as seed ortholog is 100%.
Bootstrap support for H3GUY1 as seed ortholog is 100%.

Group of orthologs #123. Best score 635 bits
Score difference with first non-orthologous sequence - C.immitis:635 P.ramorum:348

I9NLA9              	100.00%		H3GGH5              	100.00%
Bootstrap support for I9NLA9 as seed ortholog is 100%.
Bootstrap support for H3GGH5 as seed ortholog is 100%.

Group of orthologs #124. Best score 635 bits
Score difference with first non-orthologous sequence - C.immitis:304 P.ramorum:71

J3KKB5              	100.00%		H3GR76              	100.00%
Bootstrap support for J3KKB5 as seed ortholog is 100%.
Bootstrap support for H3GR76 as seed ortholog is 90%.

Group of orthologs #125. Best score 634 bits
Score difference with first non-orthologous sequence - C.immitis:634 P.ramorum:634

J3KJM2              	100.00%		H3GAA1              	100.00%
Bootstrap support for J3KJM2 as seed ortholog is 100%.
Bootstrap support for H3GAA1 as seed ortholog is 100%.

Group of orthologs #126. Best score 634 bits
Score difference with first non-orthologous sequence - C.immitis:634 P.ramorum:634

J3KM13              	100.00%		H3GEH1              	100.00%
Bootstrap support for J3KM13 as seed ortholog is 100%.
Bootstrap support for H3GEH1 as seed ortholog is 100%.

Group of orthologs #127. Best score 633 bits
Score difference with first non-orthologous sequence - C.immitis:633 P.ramorum:633

J3KGE7              	100.00%		H3G8E9              	100.00%
Bootstrap support for J3KGE7 as seed ortholog is 100%.
Bootstrap support for H3G8E9 as seed ortholog is 100%.

Group of orthologs #128. Best score 631 bits
Score difference with first non-orthologous sequence - C.immitis:392 P.ramorum:631

Q1DHB2              	100.00%		H3G7N9              	100.00%
Bootstrap support for Q1DHB2 as seed ortholog is 100%.
Bootstrap support for H3G7N9 as seed ortholog is 100%.

Group of orthologs #129. Best score 630 bits
Score difference with first non-orthologous sequence - C.immitis:630 P.ramorum:538

J3KM79              	100.00%		H3H4A7              	100.00%
Bootstrap support for J3KM79 as seed ortholog is 100%.
Bootstrap support for H3H4A7 as seed ortholog is 100%.

Group of orthologs #130. Best score 629 bits
Score difference with first non-orthologous sequence - C.immitis:446 P.ramorum:228

Q1EA54              	100.00%		H3G649              	100.00%
Bootstrap support for Q1EA54 as seed ortholog is 100%.
Bootstrap support for H3G649 as seed ortholog is 100%.

Group of orthologs #131. Best score 628 bits
Score difference with first non-orthologous sequence - C.immitis:628 P.ramorum:628

J3KKB8              	100.00%		H3GLF9              	100.00%
Bootstrap support for J3KKB8 as seed ortholog is 100%.
Bootstrap support for H3GLF9 as seed ortholog is 100%.

Group of orthologs #132. Best score 624 bits
Score difference with first non-orthologous sequence - C.immitis:282 P.ramorum:295

I9NSJ3              	100.00%		H3G5V7              	100.00%
Bootstrap support for I9NSJ3 as seed ortholog is 100%.
Bootstrap support for H3G5V7 as seed ortholog is 99%.

Group of orthologs #133. Best score 623 bits
Score difference with first non-orthologous sequence - C.immitis:4 P.ramorum:623

J3KLE7              	100.00%		H3GAE1              	100.00%
Bootstrap support for J3KLE7 as seed ortholog is 72%.
Alternative seed ortholog is J3K8R8 (4 bits away from this cluster)
Bootstrap support for H3GAE1 as seed ortholog is 100%.

Group of orthologs #134. Best score 621 bits
Score difference with first non-orthologous sequence - C.immitis:444 P.ramorum:433

Q1DTB3              	100.00%		H3GA17              	100.00%
Bootstrap support for Q1DTB3 as seed ortholog is 100%.
Bootstrap support for H3GA17 as seed ortholog is 100%.

Group of orthologs #135. Best score 619 bits
Score difference with first non-orthologous sequence - C.immitis:619 P.ramorum:312

J3K051              	100.00%		H3G8X1              	100.00%
Bootstrap support for J3K051 as seed ortholog is 100%.
Bootstrap support for H3G8X1 as seed ortholog is 100%.

Group of orthologs #136. Best score 619 bits
Score difference with first non-orthologous sequence - C.immitis:619 P.ramorum:619

J3K852              	100.00%		H3G9A5              	100.00%
Bootstrap support for J3K852 as seed ortholog is 100%.
Bootstrap support for H3G9A5 as seed ortholog is 100%.

Group of orthologs #137. Best score 619 bits
Score difference with first non-orthologous sequence - C.immitis:619 P.ramorum:619

Q1E3N5              	100.00%		H3G747              	100.00%
Bootstrap support for Q1E3N5 as seed ortholog is 100%.
Bootstrap support for H3G747 as seed ortholog is 100%.

Group of orthologs #138. Best score 619 bits
Score difference with first non-orthologous sequence - C.immitis:443 P.ramorum:416

Q1E5R1              	100.00%		H3G996              	100.00%
Bootstrap support for Q1E5R1 as seed ortholog is 100%.
Bootstrap support for H3G996 as seed ortholog is 100%.

Group of orthologs #139. Best score 617 bits
Score difference with first non-orthologous sequence - C.immitis:617 P.ramorum:617

J3KD03              	100.00%		H3G7T2              	100.00%
Bootstrap support for J3KD03 as seed ortholog is 100%.
Bootstrap support for H3G7T2 as seed ortholog is 100%.

Group of orthologs #140. Best score 617 bits
Score difference with first non-orthologous sequence - C.immitis:617 P.ramorum:445

J3KLI3              	100.00%		H3GLH3              	100.00%
Bootstrap support for J3KLI3 as seed ortholog is 100%.
Bootstrap support for H3GLH3 as seed ortholog is 100%.

Group of orthologs #141. Best score 616 bits
Score difference with first non-orthologous sequence - C.immitis:616 P.ramorum:616

J3K6N0              	100.00%		H3G978              	100.00%
Bootstrap support for J3K6N0 as seed ortholog is 100%.
Bootstrap support for H3G978 as seed ortholog is 100%.

Group of orthologs #142. Best score 615 bits
Score difference with first non-orthologous sequence - C.immitis:615 P.ramorum:534

J3K0D2              	100.00%		H3G8J5              	100.00%
Bootstrap support for J3K0D2 as seed ortholog is 100%.
Bootstrap support for H3G8J5 as seed ortholog is 100%.

Group of orthologs #143. Best score 612 bits
Score difference with first non-orthologous sequence - C.immitis:612 P.ramorum:450

J3K7X6              	100.00%		H3G8K6              	100.00%
Bootstrap support for J3K7X6 as seed ortholog is 100%.
Bootstrap support for H3G8K6 as seed ortholog is 100%.

Group of orthologs #144. Best score 607 bits
Score difference with first non-orthologous sequence - C.immitis:426 P.ramorum:270

J3KHG6              	100.00%		H3G873              	100.00%
Bootstrap support for J3KHG6 as seed ortholog is 100%.
Bootstrap support for H3G873 as seed ortholog is 100%.

Group of orthologs #145. Best score 606 bits
Score difference with first non-orthologous sequence - C.immitis:606 P.ramorum:341

J3K924              	100.00%		H3GCT4              	100.00%
Bootstrap support for J3K924 as seed ortholog is 100%.
Bootstrap support for H3GCT4 as seed ortholog is 100%.

Group of orthologs #146. Best score 604 bits
Score difference with first non-orthologous sequence - C.immitis:604 P.ramorum:363

J3K8T0              	100.00%		H3G7X1              	100.00%
Bootstrap support for J3K8T0 as seed ortholog is 100%.
Bootstrap support for H3G7X1 as seed ortholog is 100%.

Group of orthologs #147. Best score 603 bits
Score difference with first non-orthologous sequence - C.immitis:603 P.ramorum:351

J3KHQ2              	100.00%		H3G6I6              	100.00%
Bootstrap support for J3KHQ2 as seed ortholog is 100%.
Bootstrap support for H3G6I6 as seed ortholog is 100%.

Group of orthologs #148. Best score 601 bits
Score difference with first non-orthologous sequence - C.immitis:601 P.ramorum:601

J3KER0              	100.00%		H3G6X3              	100.00%
                    	       		H3GAH5              	97.13%
Bootstrap support for J3KER0 as seed ortholog is 100%.
Bootstrap support for H3G6X3 as seed ortholog is 100%.

Group of orthologs #149. Best score 601 bits
Score difference with first non-orthologous sequence - C.immitis:419 P.ramorum:396

Q1DQ20              	100.00%		H3G926              	100.00%
Bootstrap support for Q1DQ20 as seed ortholog is 100%.
Bootstrap support for H3G926 as seed ortholog is 100%.

Group of orthologs #150. Best score 600 bits
Score difference with first non-orthologous sequence - C.immitis:348 P.ramorum:380

J3K3D5              	100.00%		H3GUH6              	100.00%
Bootstrap support for J3K3D5 as seed ortholog is 100%.
Bootstrap support for H3GUH6 as seed ortholog is 100%.

Group of orthologs #151. Best score 594 bits
Score difference with first non-orthologous sequence - C.immitis:594 P.ramorum:594

J3K8A4              	100.00%		H3G952              	100.00%
Bootstrap support for J3K8A4 as seed ortholog is 100%.
Bootstrap support for H3G952 as seed ortholog is 100%.

Group of orthologs #152. Best score 594 bits
Score difference with first non-orthologous sequence - C.immitis:594 P.ramorum:594

J3K8K3              	100.00%		H3G970              	100.00%
Bootstrap support for J3K8K3 as seed ortholog is 100%.
Bootstrap support for H3G970 as seed ortholog is 100%.

Group of orthologs #153. Best score 593 bits
Score difference with first non-orthologous sequence - C.immitis:302 P.ramorum:212

Q1DP69              	100.00%		H3G9I9              	100.00%
Bootstrap support for Q1DP69 as seed ortholog is 100%.
Bootstrap support for H3G9I9 as seed ortholog is 99%.

Group of orthologs #154. Best score 590 bits
Score difference with first non-orthologous sequence - C.immitis:590 P.ramorum:590

I9NQA2              	100.00%		H3G9F4              	100.00%
Bootstrap support for I9NQA2 as seed ortholog is 100%.
Bootstrap support for H3G9F4 as seed ortholog is 100%.

Group of orthologs #155. Best score 589 bits
Score difference with first non-orthologous sequence - C.immitis:171 P.ramorum:163

J3KEZ6              	100.00%		H3GAS5              	100.00%
Bootstrap support for J3KEZ6 as seed ortholog is 100%.
Bootstrap support for H3GAS5 as seed ortholog is 100%.

Group of orthologs #156. Best score 589 bits
Score difference with first non-orthologous sequence - C.immitis:589 P.ramorum:539

J3KEM6              	100.00%		H3H2A5              	100.00%
Bootstrap support for J3KEM6 as seed ortholog is 100%.
Bootstrap support for H3H2A5 as seed ortholog is 100%.

Group of orthologs #157. Best score 588 bits
Score difference with first non-orthologous sequence - C.immitis:588 P.ramorum:588

J3KD47              	100.00%		H3GA72              	100.00%
Bootstrap support for J3KD47 as seed ortholog is 100%.
Bootstrap support for H3GA72 as seed ortholog is 100%.

Group of orthologs #158. Best score 587 bits
Score difference with first non-orthologous sequence - C.immitis:587 P.ramorum:587

J3KLI2              	100.00%		H3GA85              	100.00%
Bootstrap support for J3KLI2 as seed ortholog is 100%.
Bootstrap support for H3GA85 as seed ortholog is 100%.

Group of orthologs #159. Best score 585 bits
Score difference with first non-orthologous sequence - C.immitis:585 P.ramorum:585

J3K7D6              	100.00%		H3G9K7              	100.00%
Bootstrap support for J3K7D6 as seed ortholog is 100%.
Bootstrap support for H3G9K7 as seed ortholog is 100%.

Group of orthologs #160. Best score 584 bits
Score difference with first non-orthologous sequence - C.immitis:584 P.ramorum:584

J3KKD4              	100.00%		H3G9Z1              	100.00%
Bootstrap support for J3KKD4 as seed ortholog is 100%.
Bootstrap support for H3G9Z1 as seed ortholog is 100%.

Group of orthologs #161. Best score 583 bits
Score difference with first non-orthologous sequence - C.immitis:287 P.ramorum:211

J3K3I4              	100.00%		H3GCX9              	100.00%
Bootstrap support for J3K3I4 as seed ortholog is 100%.
Bootstrap support for H3GCX9 as seed ortholog is 99%.

Group of orthologs #162. Best score 581 bits
Score difference with first non-orthologous sequence - C.immitis:581 P.ramorum:581

J3KD82              	100.00%		H3GT27              	100.00%
Bootstrap support for J3KD82 as seed ortholog is 100%.
Bootstrap support for H3GT27 as seed ortholog is 100%.

Group of orthologs #163. Best score 580 bits
Score difference with first non-orthologous sequence - C.immitis:403 P.ramorum:405

Q1DI07              	100.00%		H3G9Z6              	100.00%
Bootstrap support for Q1DI07 as seed ortholog is 100%.
Bootstrap support for H3G9Z6 as seed ortholog is 100%.

Group of orthologs #164. Best score 579 bits
Score difference with first non-orthologous sequence - C.immitis:288 P.ramorum:579

J3K1M8              	100.00%		H3G5M3              	100.00%
Bootstrap support for J3K1M8 as seed ortholog is 99%.
Bootstrap support for H3G5M3 as seed ortholog is 100%.

Group of orthologs #165. Best score 579 bits
Score difference with first non-orthologous sequence - C.immitis:271 P.ramorum:109

J3KJ50              	100.00%		H3G8G8              	100.00%
Bootstrap support for J3KJ50 as seed ortholog is 100%.
Bootstrap support for H3G8G8 as seed ortholog is 99%.

Group of orthologs #166. Best score 578 bits
Score difference with first non-orthologous sequence - C.immitis:578 P.ramorum:578

J3K5R8              	100.00%		H3G9G8              	100.00%
Bootstrap support for J3K5R8 as seed ortholog is 100%.
Bootstrap support for H3G9G8 as seed ortholog is 100%.

Group of orthologs #167. Best score 578 bits
Score difference with first non-orthologous sequence - C.immitis:578 P.ramorum:578

J3KKG9              	100.00%		H3HC02              	100.00%
Bootstrap support for J3KKG9 as seed ortholog is 100%.
Bootstrap support for H3HC02 as seed ortholog is 100%.

Group of orthologs #168. Best score 577 bits
Score difference with first non-orthologous sequence - C.immitis:577 P.ramorum:404

J3K3W1              	100.00%		H3HAM1              	100.00%
Bootstrap support for J3K3W1 as seed ortholog is 100%.
Bootstrap support for H3HAM1 as seed ortholog is 100%.

Group of orthologs #169. Best score 577 bits
Score difference with first non-orthologous sequence - C.immitis:577 P.ramorum:577

J3KGJ8              	100.00%		H3GYM4              	100.00%
Bootstrap support for J3KGJ8 as seed ortholog is 100%.
Bootstrap support for H3GYM4 as seed ortholog is 100%.

Group of orthologs #170. Best score 576 bits
Score difference with first non-orthologous sequence - C.immitis:576 P.ramorum:356

J3KCK9              	100.00%		H3G6T5              	100.00%
Bootstrap support for J3KCK9 as seed ortholog is 100%.
Bootstrap support for H3G6T5 as seed ortholog is 100%.

Group of orthologs #171. Best score 574 bits
Score difference with first non-orthologous sequence - C.immitis:574 P.ramorum:289

J3K7S7              	100.00%		H3G5J3              	100.00%
Bootstrap support for J3K7S7 as seed ortholog is 100%.
Bootstrap support for H3G5J3 as seed ortholog is 100%.

Group of orthologs #172. Best score 574 bits
Score difference with first non-orthologous sequence - C.immitis:384 P.ramorum:350

J3KK51              	100.00%		H3GAS7              	100.00%
Bootstrap support for J3KK51 as seed ortholog is 100%.
Bootstrap support for H3GAS7 as seed ortholog is 100%.

Group of orthologs #173. Best score 572 bits
Score difference with first non-orthologous sequence - C.immitis:572 P.ramorum:335

J3KG95              	100.00%		H3G6I7              	100.00%
Bootstrap support for J3KG95 as seed ortholog is 100%.
Bootstrap support for H3G6I7 as seed ortholog is 100%.

Group of orthologs #174. Best score 572 bits
Score difference with first non-orthologous sequence - C.immitis:572 P.ramorum:572

J3K8Y2              	100.00%		H3GND3              	100.00%
Bootstrap support for J3K8Y2 as seed ortholog is 100%.
Bootstrap support for H3GND3 as seed ortholog is 100%.

Group of orthologs #175. Best score 570 bits
Score difference with first non-orthologous sequence - C.immitis:570 P.ramorum:570

J3KD94              	100.00%		H3GA05              	100.00%
Bootstrap support for J3KD94 as seed ortholog is 100%.
Bootstrap support for H3GA05 as seed ortholog is 100%.

Group of orthologs #176. Best score 569 bits
Score difference with first non-orthologous sequence - C.immitis:569 P.ramorum:109

J3KKJ1              	100.00%		H3G967              	100.00%
J3KI59              	7.18%		
Bootstrap support for J3KKJ1 as seed ortholog is 100%.
Bootstrap support for H3G967 as seed ortholog is 99%.

Group of orthologs #177. Best score 565 bits
Score difference with first non-orthologous sequence - C.immitis:565 P.ramorum:140

I9NPQ6              	100.00%		H3G9R0              	100.00%
Bootstrap support for I9NPQ6 as seed ortholog is 100%.
Bootstrap support for H3G9R0 as seed ortholog is 100%.

Group of orthologs #178. Best score 562 bits
Score difference with first non-orthologous sequence - C.immitis:562 P.ramorum:135

J3K8N6              	100.00%		H3H4C0              	100.00%
                    	       		H3GU12              	9.88%
Bootstrap support for J3K8N6 as seed ortholog is 100%.
Bootstrap support for H3H4C0 as seed ortholog is 97%.

Group of orthologs #179. Best score 561 bits
Score difference with first non-orthologous sequence - C.immitis:561 P.ramorum:366

J3KC80              	100.00%		H3HD78              	100.00%
Bootstrap support for J3KC80 as seed ortholog is 100%.
Bootstrap support for H3HD78 as seed ortholog is 100%.

Group of orthologs #180. Best score 559 bits
Score difference with first non-orthologous sequence - C.immitis:267 P.ramorum:151

J3K9H6              	100.00%		H3G5D6              	100.00%
Bootstrap support for J3K9H6 as seed ortholog is 100%.
Bootstrap support for H3G5D6 as seed ortholog is 99%.

Group of orthologs #181. Best score 559 bits
Score difference with first non-orthologous sequence - C.immitis:559 P.ramorum:224

J3K980              	100.00%		H3G9G0              	100.00%
Bootstrap support for J3K980 as seed ortholog is 100%.
Bootstrap support for H3G9G0 as seed ortholog is 100%.

Group of orthologs #182. Best score 555 bits
Score difference with first non-orthologous sequence - C.immitis:177 P.ramorum:52

J3K3I1              	100.00%		H3H123              	100.00%
Bootstrap support for J3K3I1 as seed ortholog is 99%.
Bootstrap support for H3H123 as seed ortholog is 83%.

Group of orthologs #183. Best score 554 bits
Score difference with first non-orthologous sequence - C.immitis:554 P.ramorum:554

J0HHS0              	100.00%		H3GA45              	100.00%
Bootstrap support for J0HHS0 as seed ortholog is 100%.
Bootstrap support for H3GA45 as seed ortholog is 100%.

Group of orthologs #184. Best score 553 bits
Score difference with first non-orthologous sequence - C.immitis:553 P.ramorum:553

J3KGR4              	100.00%		H3GKZ2              	100.00%
Bootstrap support for J3KGR4 as seed ortholog is 100%.
Bootstrap support for H3GKZ2 as seed ortholog is 100%.

Group of orthologs #185. Best score 551 bits
Score difference with first non-orthologous sequence - C.immitis:476 P.ramorum:255

J3K3W7              	100.00%		H3HDI7              	100.00%
                    	       		H3G8F1              	6.19%
Bootstrap support for J3K3W7 as seed ortholog is 100%.
Bootstrap support for H3HDI7 as seed ortholog is 100%.

Group of orthologs #186. Best score 547 bits
Score difference with first non-orthologous sequence - C.immitis:221 P.ramorum:284

Q1DJF0              	100.00%		H3G780              	100.00%
Bootstrap support for Q1DJF0 as seed ortholog is 100%.
Bootstrap support for H3G780 as seed ortholog is 100%.

Group of orthologs #187. Best score 546 bits
Score difference with first non-orthologous sequence - C.immitis:546 P.ramorum:546

Q1EB31              	100.00%		H3HAQ3              	100.00%
Bootstrap support for Q1EB31 as seed ortholog is 100%.
Bootstrap support for H3HAQ3 as seed ortholog is 100%.

Group of orthologs #188. Best score 545 bits
Score difference with first non-orthologous sequence - C.immitis:545 P.ramorum:545

J3K3P7              	100.00%		H3G8H1              	100.00%
Bootstrap support for J3K3P7 as seed ortholog is 100%.
Bootstrap support for H3G8H1 as seed ortholog is 100%.

Group of orthologs #189. Best score 545 bits
Score difference with first non-orthologous sequence - C.immitis:545 P.ramorum:545

J3K4D4              	100.00%		H3GIM1              	100.00%
Bootstrap support for J3K4D4 as seed ortholog is 100%.
Bootstrap support for H3GIM1 as seed ortholog is 100%.

Group of orthologs #190. Best score 543 bits
Score difference with first non-orthologous sequence - C.immitis:422 P.ramorum:383

J3K0U1              	100.00%		H3GDX6              	100.00%
J3KH97              	100.00%		H3GU09              	100.00%
J3K983              	100.00%		H3GS99              	100.00%
J3K281              	100.00%		H3H0T1              	100.00%
J3KJE5              	48.79%		H3GSA1              	79.22%
                    	       		H3H0T0              	71.10%
                    	       		H3H6M5              	69.85%
                    	       		H3H0T2              	62.10%
                    	       		H3GL25              	61.02%
                    	       		H3H6S7              	60.09%
                    	       		H3H1R1              	60.06%
                    	       		H3H5U7              	59.86%
                    	       		H3GQ62              	58.30%
                    	       		H3GNF8              	57.77%
                    	       		H3H2W8              	56.74%
                    	       		H3GD45              	56.65%
                    	       		H3GNG1              	56.24%
                    	       		H3GNG4              	55.11%
                    	       		H3GNG6              	55.02%
                    	       		H3GNG3              	54.39%
                    	       		H3GLZ4              	54.30%
                    	       		H3H1B8              	54.12%
                    	       		H3GD44              	53.81%
                    	       		H3H672              	53.67%
                    	       		H3GR90              	53.27%
                    	       		H3GLW5              	53.00%
                    	       		H3H2P6              	50.86%
                    	       		H3GNG2              	50.70%
                    	       		H3GXR5              	50.65%
                    	       		H3GXR3              	47.23%
                    	       		H3GLT8              	45.34%
                    	       		H3GK62              	42.18%
                    	       		H3GK63              	41.55%
                    	       		H3GK60              	40.78%
                    	       		H3GFN6              	40.69%
                    	       		H3GSR4              	40.11%
                    	       		H3H801              	35.00%
                    	       		H3H1B4              	29.88%
                    	       		H3GP04              	29.16%
                    	       		H3GXY8              	27.94%
                    	       		H3GXU4              	25.01%
                    	       		H3H675              	23.52%
                    	       		H3GNG5              	22.26%
                    	       		H3H939              	20.32%
                    	       		H3H671              	14.51%
                    	       		H3H5M8              	12.21%
                    	       		H3H0G1              	11.90%
                    	       		H3H0F9              	11.49%
                    	       		H3GUB1              	11.48%
                    	       		H3H747              	11.48%
                    	       		H3H1N6              	11.18%
                    	       		H3H1N3              	11.15%
                    	       		H3H1N1              	11.01%
                    	       		H3H1M7              	10.74%
                    	       		H3H1N0              	10.64%
                    	       		H3H8K6              	7.03%
Bootstrap support for J3K0U1 as seed ortholog is 100%.
Bootstrap support for J3KH97 as seed ortholog is 100%.
Bootstrap support for J3K983 as seed ortholog is 100%.
Bootstrap support for J3K281 as seed ortholog is 100%.
Bootstrap support for H3GDX6 as seed ortholog is 100%.
Bootstrap support for H3GU09 as seed ortholog is 100%.
Bootstrap support for H3GS99 as seed ortholog is 100%.
Bootstrap support for H3H0T1 as seed ortholog is 100%.

Group of orthologs #191. Best score 542 bits
Score difference with first non-orthologous sequence - C.immitis:189 P.ramorum:46

J3K0L1              	100.00%		H3G8L9              	100.00%
Bootstrap support for J3K0L1 as seed ortholog is 100%.
Bootstrap support for H3G8L9 as seed ortholog is 95%.

Group of orthologs #192. Best score 542 bits
Score difference with first non-orthologous sequence - C.immitis:542 P.ramorum:306

J3K877              	100.00%		H3G8E4              	100.00%
Bootstrap support for J3K877 as seed ortholog is 100%.
Bootstrap support for H3G8E4 as seed ortholog is 100%.

Group of orthologs #193. Best score 542 bits
Score difference with first non-orthologous sequence - C.immitis:332 P.ramorum:404

J3KCF6              	100.00%		H3G6S6              	100.00%
Bootstrap support for J3KCF6 as seed ortholog is 100%.
Bootstrap support for H3G6S6 as seed ortholog is 100%.

Group of orthologs #194. Best score 542 bits
Score difference with first non-orthologous sequence - C.immitis:542 P.ramorum:542

J3KMA0              	100.00%		H3GAI9              	100.00%
Bootstrap support for J3KMA0 as seed ortholog is 100%.
Bootstrap support for H3GAI9 as seed ortholog is 100%.

Group of orthologs #195. Best score 539 bits
Score difference with first non-orthologous sequence - C.immitis:539 P.ramorum:31

J3K8J1              	100.00%		H3GED2              	100.00%
                    	       		H3GJS3              	100.00%
                    	       		H3GWW2              	36.62%
                    	       		H3HBR1              	11.59%
                    	       		H3GLV4              	10.03%
                    	       		H3H2D8              	8.75%
                    	       		H3H128              	6.86%
                    	       		H3GVD7              	5.69%
Bootstrap support for J3K8J1 as seed ortholog is 100%.
Bootstrap support for H3GED2 as seed ortholog is 66%.
Alternative seed ortholog is H3GD90 (31 bits away from this cluster)
Bootstrap support for H3GJS3 as seed ortholog is 69%.
Alternative seed ortholog is H3GD90 (31 bits away from this cluster)

Group of orthologs #196. Best score 539 bits
Score difference with first non-orthologous sequence - C.immitis:539 P.ramorum:348

J3KBW7              	100.00%		H3G8D8              	100.00%
Bootstrap support for J3KBW7 as seed ortholog is 100%.
Bootstrap support for H3G8D8 as seed ortholog is 100%.

Group of orthologs #197. Best score 538 bits
Score difference with first non-orthologous sequence - C.immitis:538 P.ramorum:538

J3KBI9              	100.00%		H3GSI3              	100.00%
Bootstrap support for J3KBI9 as seed ortholog is 100%.
Bootstrap support for H3GSI3 as seed ortholog is 100%.

Group of orthologs #198. Best score 537 bits
Score difference with first non-orthologous sequence - C.immitis:461 P.ramorum:473

Q1DXH0              	100.00%		H3GAU6              	100.00%
Bootstrap support for Q1DXH0 as seed ortholog is 100%.
Bootstrap support for H3GAU6 as seed ortholog is 100%.

Group of orthologs #199. Best score 536 bits
Score difference with first non-orthologous sequence - C.immitis:91 P.ramorum:145

J3K0X1              	100.00%		H3G8I6              	100.00%
                    	       		H3G8I3              	70.95%
                    	       		H3G8I2              	61.26%
                    	       		H3G5S9              	47.30%
Bootstrap support for J3K0X1 as seed ortholog is 99%.
Bootstrap support for H3G8I6 as seed ortholog is 99%.

Group of orthologs #200. Best score 536 bits
Score difference with first non-orthologous sequence - C.immitis:536 P.ramorum:536

J3K2G5              	100.00%		H3GFZ4              	100.00%
Bootstrap support for J3K2G5 as seed ortholog is 100%.
Bootstrap support for H3GFZ4 as seed ortholog is 100%.

Group of orthologs #201. Best score 536 bits
Score difference with first non-orthologous sequence - C.immitis:536 P.ramorum:536

J3KG09              	100.00%		H3G9A1              	100.00%
Bootstrap support for J3KG09 as seed ortholog is 100%.
Bootstrap support for H3G9A1 as seed ortholog is 100%.

Group of orthologs #202. Best score 535 bits
Score difference with first non-orthologous sequence - C.immitis:535 P.ramorum:535

J3K113              	100.00%		H3G5V5              	100.00%
Bootstrap support for J3K113 as seed ortholog is 100%.
Bootstrap support for H3G5V5 as seed ortholog is 100%.

Group of orthologs #203. Best score 534 bits
Score difference with first non-orthologous sequence - C.immitis:534 P.ramorum:111

J3KE18              	100.00%		H3G9N6              	100.00%
Bootstrap support for J3KE18 as seed ortholog is 100%.
Bootstrap support for H3G9N6 as seed ortholog is 99%.

Group of orthologs #204. Best score 532 bits
Score difference with first non-orthologous sequence - C.immitis:532 P.ramorum:348

J3K6S7              	100.00%		H3GAL9              	100.00%
Bootstrap support for J3K6S7 as seed ortholog is 100%.
Bootstrap support for H3GAL9 as seed ortholog is 100%.

Group of orthologs #205. Best score 532 bits
Score difference with first non-orthologous sequence - C.immitis:395 P.ramorum:391

J3KL30              	100.00%		H3GAE2              	100.00%
Bootstrap support for J3KL30 as seed ortholog is 100%.
Bootstrap support for H3GAE2 as seed ortholog is 100%.

Group of orthologs #206. Best score 530 bits
Score difference with first non-orthologous sequence - C.immitis:147 P.ramorum:59

J3K5S4              	100.00%		H3GAC2              	100.00%
Bootstrap support for J3K5S4 as seed ortholog is 99%.
Bootstrap support for H3GAC2 as seed ortholog is 89%.

Group of orthologs #207. Best score 529 bits
Score difference with first non-orthologous sequence - C.immitis:169 P.ramorum:107

J3K0A9              	100.00%		H3GEM0              	100.00%
Bootstrap support for J3K0A9 as seed ortholog is 98%.
Bootstrap support for H3GEM0 as seed ortholog is 91%.

Group of orthologs #208. Best score 528 bits
Score difference with first non-orthologous sequence - C.immitis:125 P.ramorum:6

J3KE44              	100.00%		H3G8C8              	100.00%
                    	       		H3GAP9              	52.30%
Bootstrap support for J3KE44 as seed ortholog is 99%.
Bootstrap support for H3G8C8 as seed ortholog is 55%.
Alternative seed ortholog is H3G8M9 (6 bits away from this cluster)

Group of orthologs #209. Best score 528 bits
Score difference with first non-orthologous sequence - C.immitis:528 P.ramorum:528

J3KAR2              	100.00%		H3GAM6              	100.00%
Bootstrap support for J3KAR2 as seed ortholog is 100%.
Bootstrap support for H3GAM6 as seed ortholog is 100%.

Group of orthologs #210. Best score 527 bits
Score difference with first non-orthologous sequence - C.immitis:527 P.ramorum:527

J3KCR7              	100.00%		H3G852              	100.00%
Bootstrap support for J3KCR7 as seed ortholog is 100%.
Bootstrap support for H3G852 as seed ortholog is 100%.

Group of orthologs #211. Best score 527 bits
Score difference with first non-orthologous sequence - C.immitis:89 P.ramorum:527

Q96TP5              	100.00%		H3G9N7              	100.00%
Bootstrap support for Q96TP5 as seed ortholog is 98%.
Bootstrap support for H3G9N7 as seed ortholog is 100%.

Group of orthologs #212. Best score 526 bits
Score difference with first non-orthologous sequence - C.immitis:526 P.ramorum:526

J3K6H6              	100.00%		H3GP75              	100.00%
Bootstrap support for J3K6H6 as seed ortholog is 100%.
Bootstrap support for H3GP75 as seed ortholog is 100%.

Group of orthologs #213. Best score 525 bits
Score difference with first non-orthologous sequence - C.immitis:525 P.ramorum:525

Q1DRB6              	100.00%		H3G5N2              	100.00%
Bootstrap support for Q1DRB6 as seed ortholog is 100%.
Bootstrap support for H3G5N2 as seed ortholog is 100%.

Group of orthologs #214. Best score 524 bits
Score difference with first non-orthologous sequence - C.immitis:524 P.ramorum:136

J3KCR8              	100.00%		H3GAR9              	100.00%
Bootstrap support for J3KCR8 as seed ortholog is 100%.
Bootstrap support for H3GAR9 as seed ortholog is 99%.

Group of orthologs #215. Best score 520 bits
Score difference with first non-orthologous sequence - C.immitis:151 P.ramorum:131

J3KHE3              	100.00%		H3GCI6              	100.00%
                    	       		H3G910              	32.40%
Bootstrap support for J3KHE3 as seed ortholog is 98%.
Bootstrap support for H3GCI6 as seed ortholog is 93%.

Group of orthologs #216. Best score 519 bits
Score difference with first non-orthologous sequence - C.immitis:519 P.ramorum:519

J3KLS6              	100.00%		H3G986              	100.00%
Bootstrap support for J3KLS6 as seed ortholog is 100%.
Bootstrap support for H3G986 as seed ortholog is 100%.

Group of orthologs #217. Best score 517 bits
Score difference with first non-orthologous sequence - C.immitis:517 P.ramorum:517

J3K1D1              	100.00%		H3G6I4              	100.00%
                    	       		H3H5Y3              	37.15%
Bootstrap support for J3K1D1 as seed ortholog is 100%.
Bootstrap support for H3G6I4 as seed ortholog is 100%.

Group of orthologs #218. Best score 516 bits
Score difference with first non-orthologous sequence - C.immitis:516 P.ramorum:516

Q1E6U9              	100.00%		H3GG43              	100.00%
Bootstrap support for Q1E6U9 as seed ortholog is 100%.
Bootstrap support for H3GG43 as seed ortholog is 100%.

Group of orthologs #219. Best score 510 bits
Score difference with first non-orthologous sequence - C.immitis:510 P.ramorum:510

J3K5B7              	100.00%		H3G914              	100.00%
Bootstrap support for J3K5B7 as seed ortholog is 100%.
Bootstrap support for H3G914 as seed ortholog is 100%.

Group of orthologs #220. Best score 510 bits
Score difference with first non-orthologous sequence - C.immitis:510 P.ramorum:306

J3K6I1              	100.00%		H3GFB0              	100.00%
Bootstrap support for J3K6I1 as seed ortholog is 100%.
Bootstrap support for H3GFB0 as seed ortholog is 100%.

Group of orthologs #221. Best score 510 bits
Score difference with first non-orthologous sequence - C.immitis:510 P.ramorum:340

J3KBL3              	100.00%		H3H0Z5              	100.00%
Bootstrap support for J3KBL3 as seed ortholog is 100%.
Bootstrap support for H3H0Z5 as seed ortholog is 100%.

Group of orthologs #222. Best score 510 bits
Score difference with first non-orthologous sequence - C.immitis:510 P.ramorum:510

J3KC37              	100.00%		H3HD79              	100.00%
Bootstrap support for J3KC37 as seed ortholog is 100%.
Bootstrap support for H3HD79 as seed ortholog is 100%.

Group of orthologs #223. Best score 509 bits
Score difference with first non-orthologous sequence - C.immitis:509 P.ramorum:509

J3K3N0              	100.00%		H3GG74              	100.00%
Bootstrap support for J3K3N0 as seed ortholog is 100%.
Bootstrap support for H3GG74 as seed ortholog is 100%.

Group of orthologs #224. Best score 508 bits
Score difference with first non-orthologous sequence - C.immitis:508 P.ramorum:508

J3KJS5              	100.00%		H3GXS1              	100.00%
Bootstrap support for J3KJS5 as seed ortholog is 100%.
Bootstrap support for H3GXS1 as seed ortholog is 100%.

Group of orthologs #225. Best score 507 bits
Score difference with first non-orthologous sequence - C.immitis:409 P.ramorum:507

J3K4B3              	100.00%		H3GVT4              	100.00%
Bootstrap support for J3K4B3 as seed ortholog is 100%.
Bootstrap support for H3GVT4 as seed ortholog is 100%.

Group of orthologs #226. Best score 507 bits
Score difference with first non-orthologous sequence - C.immitis:507 P.ramorum:507

J3K511              	100.00%		H3HD47              	100.00%
Bootstrap support for J3K511 as seed ortholog is 100%.
Bootstrap support for H3HD47 as seed ortholog is 100%.

Group of orthologs #227. Best score 507 bits
Score difference with first non-orthologous sequence - C.immitis:315 P.ramorum:294

Q1E2B2              	100.00%		H3GVG1              	100.00%
Bootstrap support for Q1E2B2 as seed ortholog is 100%.
Bootstrap support for H3GVG1 as seed ortholog is 100%.

Group of orthologs #228. Best score 506 bits
Score difference with first non-orthologous sequence - C.immitis:64 P.ramorum:506

J3K8D9              	100.00%		H3G951              	100.00%
Bootstrap support for J3K8D9 as seed ortholog is 94%.
Bootstrap support for H3G951 as seed ortholog is 100%.

Group of orthologs #229. Best score 505 bits
Score difference with first non-orthologous sequence - C.immitis:505 P.ramorum:505

J3KG56              	100.00%		H3G7E8              	100.00%
Bootstrap support for J3KG56 as seed ortholog is 100%.
Bootstrap support for H3G7E8 as seed ortholog is 100%.

Group of orthologs #230. Best score 505 bits
Score difference with first non-orthologous sequence - C.immitis:372 P.ramorum:453

J3KI63              	100.00%		H3G9T1              	100.00%
Bootstrap support for J3KI63 as seed ortholog is 100%.
Bootstrap support for H3G9T1 as seed ortholog is 100%.

Group of orthologs #231. Best score 503 bits
Score difference with first non-orthologous sequence - C.immitis:503 P.ramorum:503

J0HF14              	100.00%		H3G764              	100.00%
                    	       		H3G9R8              	79.56%
Bootstrap support for J0HF14 as seed ortholog is 100%.
Bootstrap support for H3G764 as seed ortholog is 100%.

Group of orthologs #232. Best score 503 bits
Score difference with first non-orthologous sequence - C.immitis:503 P.ramorum:169

I9XM91              	100.00%		H3GAQ8              	100.00%
Bootstrap support for I9XM91 as seed ortholog is 100%.
Bootstrap support for H3GAQ8 as seed ortholog is 99%.

Group of orthologs #233. Best score 503 bits
Score difference with first non-orthologous sequence - C.immitis:416 P.ramorum:131

J3K7X3              	100.00%		H3GA43              	100.00%
Bootstrap support for J3K7X3 as seed ortholog is 100%.
Bootstrap support for H3GA43 as seed ortholog is 99%.

Group of orthologs #234. Best score 502 bits
Score difference with first non-orthologous sequence - C.immitis:502 P.ramorum:502

J3K030              	100.00%		H3GNK8              	100.00%
Bootstrap support for J3K030 as seed ortholog is 100%.
Bootstrap support for H3GNK8 as seed ortholog is 100%.

Group of orthologs #235. Best score 502 bits
Score difference with first non-orthologous sequence - C.immitis:502 P.ramorum:325

J3K9L2              	100.00%		H3H3A8              	100.00%
Bootstrap support for J3K9L2 as seed ortholog is 100%.
Bootstrap support for H3H3A8 as seed ortholog is 100%.

Group of orthologs #236. Best score 501 bits
Score difference with first non-orthologous sequence - C.immitis:501 P.ramorum:501

J3K0E7              	100.00%		H3G863              	100.00%
Bootstrap support for J3K0E7 as seed ortholog is 100%.
Bootstrap support for H3G863 as seed ortholog is 100%.

Group of orthologs #237. Best score 498 bits
Score difference with first non-orthologous sequence - C.immitis:498 P.ramorum:498

J3K1X3              	100.00%		H3GA19              	100.00%
Bootstrap support for J3K1X3 as seed ortholog is 100%.
Bootstrap support for H3GA19 as seed ortholog is 100%.

Group of orthologs #238. Best score 498 bits
Score difference with first non-orthologous sequence - C.immitis:498 P.ramorum:498

J3KKK2              	100.00%		H3G5Z0              	100.00%
Bootstrap support for J3KKK2 as seed ortholog is 100%.
Bootstrap support for H3G5Z0 as seed ortholog is 100%.

Group of orthologs #239. Best score 498 bits
Score difference with first non-orthologous sequence - C.immitis:498 P.ramorum:498

J3KKA7              	100.00%		H3GAM7              	100.00%
Bootstrap support for J3KKA7 as seed ortholog is 100%.
Bootstrap support for H3GAM7 as seed ortholog is 100%.

Group of orthologs #240. Best score 496 bits
Score difference with first non-orthologous sequence - C.immitis:384 P.ramorum:310

J3K7F7              	100.00%		H3G9P8              	100.00%
Bootstrap support for J3K7F7 as seed ortholog is 100%.
Bootstrap support for H3G9P8 as seed ortholog is 100%.

Group of orthologs #241. Best score 496 bits
Score difference with first non-orthologous sequence - C.immitis:496 P.ramorum:496

J3KIP7              	100.00%		H3GTV1              	100.00%
Bootstrap support for J3KIP7 as seed ortholog is 100%.
Bootstrap support for H3GTV1 as seed ortholog is 100%.

Group of orthologs #242. Best score 496 bits
Score difference with first non-orthologous sequence - C.immitis:227 P.ramorum:277

Q1E1N5              	100.00%		H3GTT0              	100.00%
Bootstrap support for Q1E1N5 as seed ortholog is 100%.
Bootstrap support for H3GTT0 as seed ortholog is 100%.

Group of orthologs #243. Best score 495 bits
Score difference with first non-orthologous sequence - C.immitis:495 P.ramorum:495

J3KDF1              	100.00%		H3G8H8              	100.00%
Bootstrap support for J3KDF1 as seed ortholog is 100%.
Bootstrap support for H3G8H8 as seed ortholog is 100%.

Group of orthologs #244. Best score 493 bits
Score difference with first non-orthologous sequence - C.immitis:493 P.ramorum:378

J3K3V9              	100.00%		H3GAT5              	100.00%
                    	       		H3GAG9              	7.65%
Bootstrap support for J3K3V9 as seed ortholog is 100%.
Bootstrap support for H3GAT5 as seed ortholog is 100%.

Group of orthologs #245. Best score 492 bits
Score difference with first non-orthologous sequence - C.immitis:225 P.ramorum:269

J3K8D5              	100.00%		H3G4Y7              	100.00%
                    	       		H3G5C6              	5.75%
Bootstrap support for J3K8D5 as seed ortholog is 99%.
Bootstrap support for H3G4Y7 as seed ortholog is 100%.

Group of orthologs #246. Best score 492 bits
Score difference with first non-orthologous sequence - C.immitis:123 P.ramorum:492

J3K7H1              	100.00%		H3GA94              	100.00%
                    	       		H3G7R9              	57.61%
Bootstrap support for J3K7H1 as seed ortholog is 99%.
Bootstrap support for H3GA94 as seed ortholog is 100%.

Group of orthologs #247. Best score 492 bits
Score difference with first non-orthologous sequence - C.immitis:492 P.ramorum:358

J3K6Z7              	100.00%		H3G5E1              	100.00%
Bootstrap support for J3K6Z7 as seed ortholog is 100%.
Bootstrap support for H3G5E1 as seed ortholog is 100%.

Group of orthologs #248. Best score 491 bits
Score difference with first non-orthologous sequence - C.immitis:491 P.ramorum:491

I9NPK0              	100.00%		H3G8U2              	100.00%
Bootstrap support for I9NPK0 as seed ortholog is 100%.
Bootstrap support for H3G8U2 as seed ortholog is 100%.

Group of orthologs #249. Best score 491 bits
Score difference with first non-orthologous sequence - C.immitis:491 P.ramorum:491

J3K900              	100.00%		H3GQ19              	100.00%
Bootstrap support for J3K900 as seed ortholog is 100%.
Bootstrap support for H3GQ19 as seed ortholog is 100%.

Group of orthologs #250. Best score 490 bits
Score difference with first non-orthologous sequence - C.immitis:490 P.ramorum:490

J3K5W3              	100.00%		H3GS01              	100.00%
J3K8F6              	12.73%		H3GTN8              	36.32%
Bootstrap support for J3K5W3 as seed ortholog is 100%.
Bootstrap support for H3GS01 as seed ortholog is 100%.

Group of orthologs #251. Best score 489 bits
Score difference with first non-orthologous sequence - C.immitis:489 P.ramorum:489

I9XLK3              	100.00%		H3GRC1              	100.00%
Bootstrap support for I9XLK3 as seed ortholog is 100%.
Bootstrap support for H3GRC1 as seed ortholog is 100%.

Group of orthologs #252. Best score 489 bits
Score difference with first non-orthologous sequence - C.immitis:489 P.ramorum:489

J3KK60              	100.00%		H3G924              	100.00%
Bootstrap support for J3KK60 as seed ortholog is 100%.
Bootstrap support for H3G924 as seed ortholog is 100%.

Group of orthologs #253. Best score 489 bits
Score difference with first non-orthologous sequence - C.immitis:108 P.ramorum:489

J3KKY6              	100.00%		H3H2Y0              	100.00%
Bootstrap support for J3KKY6 as seed ortholog is 92%.
Bootstrap support for H3H2Y0 as seed ortholog is 100%.

Group of orthologs #254. Best score 487 bits
Score difference with first non-orthologous sequence - C.immitis:487 P.ramorum:487

J3K2K4              	100.00%		H3GC19              	100.00%
Bootstrap support for J3K2K4 as seed ortholog is 100%.
Bootstrap support for H3GC19 as seed ortholog is 100%.

Group of orthologs #255. Best score 487 bits
Score difference with first non-orthologous sequence - C.immitis:487 P.ramorum:487

J0HHA1              	100.00%		H3GVH6              	100.00%
Bootstrap support for J0HHA1 as seed ortholog is 100%.
Bootstrap support for H3GVH6 as seed ortholog is 100%.

Group of orthologs #256. Best score 485 bits
Score difference with first non-orthologous sequence - C.immitis:485 P.ramorum:485

J0HGK5              	100.00%		H3G8V9              	100.00%
Bootstrap support for J0HGK5 as seed ortholog is 100%.
Bootstrap support for H3G8V9 as seed ortholog is 100%.

Group of orthologs #257. Best score 485 bits
Score difference with first non-orthologous sequence - C.immitis:485 P.ramorum:249

Q1E5T3              	100.00%		H3G5M4              	100.00%
Bootstrap support for Q1E5T3 as seed ortholog is 100%.
Bootstrap support for H3G5M4 as seed ortholog is 99%.

Group of orthologs #258. Best score 485 bits
Score difference with first non-orthologous sequence - C.immitis:485 P.ramorum:485

J3KLA8              	100.00%		H3HDS6              	100.00%
Bootstrap support for J3KLA8 as seed ortholog is 100%.
Bootstrap support for H3HDS6 as seed ortholog is 100%.

Group of orthologs #259. Best score 484 bits
Score difference with first non-orthologous sequence - C.immitis:106 P.ramorum:216

J3K1M5              	100.00%		H3GA49              	100.00%
                    	       		H3G616              	7.43%
Bootstrap support for J3K1M5 as seed ortholog is 99%.
Bootstrap support for H3GA49 as seed ortholog is 100%.

Group of orthologs #260. Best score 483 bits
Score difference with first non-orthologous sequence - C.immitis:483 P.ramorum:483

J3K4I6              	100.00%		H3G751              	100.00%
Bootstrap support for J3K4I6 as seed ortholog is 100%.
Bootstrap support for H3G751 as seed ortholog is 100%.

Group of orthologs #261. Best score 483 bits
Score difference with first non-orthologous sequence - C.immitis:397 P.ramorum:357

J3K2E5              	100.00%		H3GAT7              	100.00%
Bootstrap support for J3K2E5 as seed ortholog is 100%.
Bootstrap support for H3GAT7 as seed ortholog is 100%.

Group of orthologs #262. Best score 483 bits
Score difference with first non-orthologous sequence - C.immitis:483 P.ramorum:483

J3KJP7              	100.00%		H3GUI9              	100.00%
Bootstrap support for J3KJP7 as seed ortholog is 100%.
Bootstrap support for H3GUI9 as seed ortholog is 100%.

Group of orthologs #263. Best score 483 bits
Score difference with first non-orthologous sequence - C.immitis:294 P.ramorum:344

J3KKN8              	100.00%		H3GTV2              	100.00%
Bootstrap support for J3KKN8 as seed ortholog is 100%.
Bootstrap support for H3GTV2 as seed ortholog is 100%.

Group of orthologs #264. Best score 482 bits
Score difference with first non-orthologous sequence - C.immitis:119 P.ramorum:354

I9XIU9              	100.00%		H3HDS0              	100.00%
J3KAY6              	35.17%		
Bootstrap support for I9XIU9 as seed ortholog is 99%.
Bootstrap support for H3HDS0 as seed ortholog is 100%.

Group of orthologs #265. Best score 482 bits
Score difference with first non-orthologous sequence - C.immitis:166 P.ramorum:482

J3K2R2              	100.00%		H3G975              	100.00%
Bootstrap support for J3K2R2 as seed ortholog is 99%.
Bootstrap support for H3G975 as seed ortholog is 100%.

Group of orthologs #266. Best score 480 bits
Score difference with first non-orthologous sequence - C.immitis:480 P.ramorum:480

J3K050              	100.00%		H3GA10              	100.00%
J3KJS6              	27.70%		
Bootstrap support for J3K050 as seed ortholog is 100%.
Bootstrap support for H3GA10 as seed ortholog is 100%.

Group of orthologs #267. Best score 480 bits
Score difference with first non-orthologous sequence - C.immitis:246 P.ramorum:234

Q1DMX8              	100.00%		H3GWG5              	100.00%
Bootstrap support for Q1DMX8 as seed ortholog is 99%.
Bootstrap support for H3GWG5 as seed ortholog is 99%.

Group of orthologs #268. Best score 479 bits
Score difference with first non-orthologous sequence - C.immitis:346 P.ramorum:312

J3K569              	100.00%		H3G9P9              	100.00%
                    	       		H3GB14              	100.00%
Bootstrap support for J3K569 as seed ortholog is 100%.
Bootstrap support for H3G9P9 as seed ortholog is 100%.
Bootstrap support for H3GB14 as seed ortholog is 100%.

Group of orthologs #269. Best score 477 bits
Score difference with first non-orthologous sequence - C.immitis:477 P.ramorum:477

I9NT37              	100.00%		H3G835              	100.00%
Bootstrap support for I9NT37 as seed ortholog is 100%.
Bootstrap support for H3G835 as seed ortholog is 100%.

Group of orthologs #270. Best score 477 bits
Score difference with first non-orthologous sequence - C.immitis:76 P.ramorum:222

J3KK54              	100.00%		H3G4Y9              	100.00%
Bootstrap support for J3KK54 as seed ortholog is 93%.
Bootstrap support for H3G4Y9 as seed ortholog is 99%.

Group of orthologs #271. Best score 476 bits
Score difference with first non-orthologous sequence - C.immitis:74 P.ramorum:173

I9NNQ1              	100.00%		H3G8X6              	100.00%
                    	       		H3G7A9              	14.95%
Bootstrap support for I9NNQ1 as seed ortholog is 89%.
Bootstrap support for H3G8X6 as seed ortholog is 99%.

Group of orthologs #272. Best score 476 bits
Score difference with first non-orthologous sequence - C.immitis:476 P.ramorum:476

J3K782              	100.00%		H3GG34              	100.00%
Bootstrap support for J3K782 as seed ortholog is 100%.
Bootstrap support for H3GG34 as seed ortholog is 100%.

Group of orthologs #273. Best score 476 bits
Score difference with first non-orthologous sequence - C.immitis:101 P.ramorum:87

J3K2J5              	100.00%		H3HDB5              	100.00%
Bootstrap support for J3K2J5 as seed ortholog is 99%.
Bootstrap support for H3HDB5 as seed ortholog is 99%.

Group of orthologs #274. Best score 475 bits
Score difference with first non-orthologous sequence - C.immitis:475 P.ramorum:475

J3K079              	100.00%		H3G9Y9              	100.00%
Bootstrap support for J3K079 as seed ortholog is 100%.
Bootstrap support for H3G9Y9 as seed ortholog is 100%.

Group of orthologs #275. Best score 475 bits
Score difference with first non-orthologous sequence - C.immitis:98 P.ramorum:475

J3KHV7              	100.00%		H3G5C8              	100.00%
Bootstrap support for J3KHV7 as seed ortholog is 95%.
Bootstrap support for H3G5C8 as seed ortholog is 100%.

Group of orthologs #276. Best score 474 bits
Score difference with first non-orthologous sequence - C.immitis:474 P.ramorum:474

J3KJV9              	100.00%		H3GKJ4              	100.00%
Bootstrap support for J3KJV9 as seed ortholog is 100%.
Bootstrap support for H3GKJ4 as seed ortholog is 100%.

Group of orthologs #277. Best score 473 bits
Score difference with first non-orthologous sequence - C.immitis:148 P.ramorum:473

J3KDN8              	100.00%		H3G9J5              	100.00%
                    	       		H3G9E1              	62.44%
                    	       		H3G6P1              	43.05%
Bootstrap support for J3KDN8 as seed ortholog is 99%.
Bootstrap support for H3G9J5 as seed ortholog is 100%.

Group of orthologs #278. Best score 473 bits
Score difference with first non-orthologous sequence - C.immitis:139 P.ramorum:409

J3K4E6              	100.00%		H3G4X1              	100.00%
                    	       		H3G9E4              	72.57%
Bootstrap support for J3K4E6 as seed ortholog is 99%.
Bootstrap support for H3G4X1 as seed ortholog is 100%.

Group of orthologs #279. Best score 472 bits
Score difference with first non-orthologous sequence - C.immitis:94 P.ramorum:58

I9XM85              	100.00%		H3GEV6              	100.00%
                    	       		H3HCY4              	6.96%
Bootstrap support for I9XM85 as seed ortholog is 89%.
Bootstrap support for H3GEV6 as seed ortholog is 90%.

Group of orthologs #280. Best score 472 bits
Score difference with first non-orthologous sequence - C.immitis:472 P.ramorum:335

J3K207              	100.00%		H3G8R2              	100.00%
Bootstrap support for J3K207 as seed ortholog is 100%.
Bootstrap support for H3G8R2 as seed ortholog is 100%.

Group of orthologs #281. Best score 470 bits
Score difference with first non-orthologous sequence - C.immitis:470 P.ramorum:470

J3KAW8              	100.00%		H3G847              	100.00%
Bootstrap support for J3KAW8 as seed ortholog is 100%.
Bootstrap support for H3G847 as seed ortholog is 100%.

Group of orthologs #282. Best score 470 bits
Score difference with first non-orthologous sequence - C.immitis:470 P.ramorum:470

Q1DXU0              	100.00%		H3GEW8              	100.00%
Bootstrap support for Q1DXU0 as seed ortholog is 100%.
Bootstrap support for H3GEW8 as seed ortholog is 100%.

Group of orthologs #283. Best score 469 bits
Score difference with first non-orthologous sequence - C.immitis:400 P.ramorum:340

J3K1Y2              	100.00%		H3HBV5              	100.00%
Bootstrap support for J3K1Y2 as seed ortholog is 100%.
Bootstrap support for H3HBV5 as seed ortholog is 100%.

Group of orthologs #284. Best score 466 bits
Score difference with first non-orthologous sequence - C.immitis:90 P.ramorum:466

J3KJH2              	100.00%		H3G9S1              	100.00%
Bootstrap support for J3KJH2 as seed ortholog is 99%.
Bootstrap support for H3G9S1 as seed ortholog is 100%.

Group of orthologs #285. Best score 465 bits
Score difference with first non-orthologous sequence - C.immitis:342 P.ramorum:403

J3KGG0              	100.00%		H3GAC1              	100.00%
Bootstrap support for J3KGG0 as seed ortholog is 100%.
Bootstrap support for H3GAC1 as seed ortholog is 100%.

Group of orthologs #286. Best score 464 bits
Score difference with first non-orthologous sequence - C.immitis:464 P.ramorum:464

J3KJA6              	100.00%		H3G8W5              	100.00%
Bootstrap support for J3KJA6 as seed ortholog is 100%.
Bootstrap support for H3G8W5 as seed ortholog is 100%.

Group of orthologs #287. Best score 463 bits
Score difference with first non-orthologous sequence - C.immitis:320 P.ramorum:27

J3K8I8              	100.00%		H3GK38              	100.00%
                    	       		H3HBW2              	84.16%
                    	       		H3GK36              	18.93%
                    	       		H3HBW6              	9.16%
Bootstrap support for J3K8I8 as seed ortholog is 100%.
Bootstrap support for H3GK38 as seed ortholog is 64%.
Alternative seed ortholog is H3GU93 (27 bits away from this cluster)

Group of orthologs #288. Best score 463 bits
Score difference with first non-orthologous sequence - C.immitis:463 P.ramorum:463

J3K8I0              	100.00%		H3G7T9              	100.00%
Bootstrap support for J3K8I0 as seed ortholog is 100%.
Bootstrap support for H3G7T9 as seed ortholog is 100%.

Group of orthologs #289. Best score 462 bits
Score difference with first non-orthologous sequence - C.immitis:462 P.ramorum:462

Q1EB38              	100.00%		H3GSH8              	100.00%
Bootstrap support for Q1EB38 as seed ortholog is 100%.
Bootstrap support for H3GSH8 as seed ortholog is 100%.

Group of orthologs #290. Best score 461 bits
Score difference with first non-orthologous sequence - C.immitis:461 P.ramorum:287

J3K6C8              	100.00%		H3G4Y1              	100.00%
Bootstrap support for J3K6C8 as seed ortholog is 100%.
Bootstrap support for H3G4Y1 as seed ortholog is 100%.

Group of orthologs #291. Best score 459 bits
Score difference with first non-orthologous sequence - C.immitis:459 P.ramorum:459

J3K959              	100.00%		H3G9L9              	100.00%
Bootstrap support for J3K959 as seed ortholog is 100%.
Bootstrap support for H3G9L9 as seed ortholog is 100%.

Group of orthologs #292. Best score 459 bits
Score difference with first non-orthologous sequence - C.immitis:386 P.ramorum:459

J3KC47              	100.00%		H3G9S8              	100.00%
Bootstrap support for J3KC47 as seed ortholog is 100%.
Bootstrap support for H3G9S8 as seed ortholog is 100%.

Group of orthologs #293. Best score 459 bits
Score difference with first non-orthologous sequence - C.immitis:459 P.ramorum:459

J3KEU6              	100.00%		H3G762              	100.00%
Bootstrap support for J3KEU6 as seed ortholog is 100%.
Bootstrap support for H3G762 as seed ortholog is 100%.

Group of orthologs #294. Best score 458 bits
Score difference with first non-orthologous sequence - C.immitis:458 P.ramorum:458

J3K8I5              	100.00%		H3G8W8              	100.00%
Bootstrap support for J3K8I5 as seed ortholog is 100%.
Bootstrap support for H3G8W8 as seed ortholog is 100%.

Group of orthologs #295. Best score 458 bits
Score difference with first non-orthologous sequence - C.immitis:458 P.ramorum:458

J3KHV4              	100.00%		H3G5G0              	100.00%
Bootstrap support for J3KHV4 as seed ortholog is 100%.
Bootstrap support for H3G5G0 as seed ortholog is 100%.

Group of orthologs #296. Best score 458 bits
Score difference with first non-orthologous sequence - C.immitis:458 P.ramorum:13

Q1DTF9              	100.00%		H3G874              	100.00%
Bootstrap support for Q1DTF9 as seed ortholog is 100%.
Bootstrap support for H3G874 as seed ortholog is 67%.
Alternative seed ortholog is H3G964 (13 bits away from this cluster)

Group of orthologs #297. Best score 458 bits
Score difference with first non-orthologous sequence - C.immitis:458 P.ramorum:458

J3KET3              	100.00%		H3GHV2              	100.00%
Bootstrap support for J3KET3 as seed ortholog is 100%.
Bootstrap support for H3GHV2 as seed ortholog is 100%.

Group of orthologs #298. Best score 456 bits
Score difference with first non-orthologous sequence - C.immitis:247 P.ramorum:251

J3K7N4              	100.00%		H3GA00              	100.00%
Bootstrap support for J3K7N4 as seed ortholog is 100%.
Bootstrap support for H3GA00 as seed ortholog is 100%.

Group of orthologs #299. Best score 456 bits
Score difference with first non-orthologous sequence - C.immitis:456 P.ramorum:210

J3KKJ4              	100.00%		H3GA44              	100.00%
Bootstrap support for J3KKJ4 as seed ortholog is 100%.
Bootstrap support for H3GA44 as seed ortholog is 100%.

Group of orthologs #300. Best score 455 bits
Score difference with first non-orthologous sequence - C.immitis:455 P.ramorum:455

J3K2B1              	100.00%		H3GAH2              	100.00%
                    	       		H3GAH1              	91.72%
Bootstrap support for J3K2B1 as seed ortholog is 100%.
Bootstrap support for H3GAH2 as seed ortholog is 100%.

Group of orthologs #301. Best score 455 bits
Score difference with first non-orthologous sequence - C.immitis:455 P.ramorum:376

J3KJ17              	100.00%		H3G9Z8              	100.00%
                    	       		H3G9Z7              	94.32%
Bootstrap support for J3KJ17 as seed ortholog is 100%.
Bootstrap support for H3G9Z8 as seed ortholog is 100%.

Group of orthologs #302. Best score 455 bits
Score difference with first non-orthologous sequence - C.immitis:455 P.ramorum:455

J3K0Y0              	100.00%		H3G5B1              	100.00%
Bootstrap support for J3K0Y0 as seed ortholog is 100%.
Bootstrap support for H3G5B1 as seed ortholog is 100%.

Group of orthologs #303. Best score 455 bits
Score difference with first non-orthologous sequence - C.immitis:455 P.ramorum:455

J3KAU7              	100.00%		H3GCM9              	100.00%
Bootstrap support for J3KAU7 as seed ortholog is 100%.
Bootstrap support for H3GCM9 as seed ortholog is 100%.

Group of orthologs #304. Best score 455 bits
Score difference with first non-orthologous sequence - C.immitis:455 P.ramorum:190

J3KFL5              	100.00%		H3G9Q7              	100.00%
Bootstrap support for J3KFL5 as seed ortholog is 100%.
Bootstrap support for H3G9Q7 as seed ortholog is 99%.

Group of orthologs #305. Best score 454 bits
Score difference with first non-orthologous sequence - C.immitis:454 P.ramorum:78

J3K348              	100.00%		H3H3X5              	100.00%
Bootstrap support for J3K348 as seed ortholog is 100%.
Bootstrap support for H3H3X5 as seed ortholog is 93%.

Group of orthologs #306. Best score 453 bits
Score difference with first non-orthologous sequence - C.immitis:226 P.ramorum:135

J3KAU2              	100.00%		H3GY41              	100.00%
J0HEE4              	32.51%		H3H5V6              	41.26%
J3KGC8              	26.92%		H3G6X0              	29.47%
                    	       		H3HAC5              	24.92%
Bootstrap support for J3KAU2 as seed ortholog is 99%.
Bootstrap support for H3GY41 as seed ortholog is 97%.

Group of orthologs #307. Best score 453 bits
Score difference with first non-orthologous sequence - C.immitis:453 P.ramorum:453

J3KJ55              	100.00%		H3G8D2              	100.00%
Bootstrap support for J3KJ55 as seed ortholog is 100%.
Bootstrap support for H3G8D2 as seed ortholog is 100%.

Group of orthologs #308. Best score 453 bits
Score difference with first non-orthologous sequence - C.immitis:345 P.ramorum:453

J3KKS4              	100.00%		H3GAK0              	100.00%
Bootstrap support for J3KKS4 as seed ortholog is 100%.
Bootstrap support for H3GAK0 as seed ortholog is 100%.

Group of orthologs #309. Best score 452 bits
Score difference with first non-orthologous sequence - C.immitis:452 P.ramorum:452

J3KHS9              	100.00%		H3G7L1              	100.00%
Bootstrap support for J3KHS9 as seed ortholog is 100%.
Bootstrap support for H3G7L1 as seed ortholog is 100%.

Group of orthologs #310. Best score 452 bits
Score difference with first non-orthologous sequence - C.immitis:452 P.ramorum:452

J3KKC0              	100.00%		H3G7Y5              	100.00%
Bootstrap support for J3KKC0 as seed ortholog is 100%.
Bootstrap support for H3G7Y5 as seed ortholog is 100%.

Group of orthologs #311. Best score 451 bits
Score difference with first non-orthologous sequence - C.immitis:176 P.ramorum:451

J3KD99              	100.00%		H3G8V7              	100.00%
                    	       		H3G5G8              	50.00%
Bootstrap support for J3KD99 as seed ortholog is 99%.
Bootstrap support for H3G8V7 as seed ortholog is 100%.

Group of orthologs #312. Best score 451 bits
Score difference with first non-orthologous sequence - C.immitis:92 P.ramorum:243

J3KI90              	100.00%		H3G9B2              	100.00%
                    	       		H3GAI2              	33.52%
Bootstrap support for J3KI90 as seed ortholog is 98%.
Bootstrap support for H3G9B2 as seed ortholog is 100%.

Group of orthologs #313. Best score 450 bits
Score difference with first non-orthologous sequence - C.immitis:450 P.ramorum:450

J3K2V2              	100.00%		H3G8X8              	100.00%
                    	       		H3G5F5              	92.89%
                    	       		H3G7K6              	71.54%
Bootstrap support for J3K2V2 as seed ortholog is 100%.
Bootstrap support for H3G8X8 as seed ortholog is 100%.

Group of orthologs #314. Best score 450 bits
Score difference with first non-orthologous sequence - C.immitis:305 P.ramorum:99

J3KLQ2              	100.00%		H3G6Z5              	100.00%
Bootstrap support for J3KLQ2 as seed ortholog is 100%.
Bootstrap support for H3G6Z5 as seed ortholog is 99%.

Group of orthologs #315. Best score 449 bits
Score difference with first non-orthologous sequence - C.immitis:118 P.ramorum:129

J3KDU8              	100.00%		H3GA61              	100.00%
Bootstrap support for J3KDU8 as seed ortholog is 99%.
Bootstrap support for H3GA61 as seed ortholog is 99%.

Group of orthologs #316. Best score 448 bits
Score difference with first non-orthologous sequence - C.immitis:307 P.ramorum:334

J3K984              	100.00%		H3GH74              	100.00%
                    	       		H3GIJ8              	45.58%
                    	       		H3GWY5              	16.44%
                    	       		H3GYZ5              	16.44%
                    	       		H3GK29              	16.34%
                    	       		H3GYZ4              	16.03%
                    	       		H3GSM3              	15.16%
                    	       		H3GZ00              	9.71%
                    	       		H3GYZ7              	5.32%
Bootstrap support for J3K984 as seed ortholog is 100%.
Bootstrap support for H3GH74 as seed ortholog is 100%.

Group of orthologs #317. Best score 448 bits
Score difference with first non-orthologous sequence - C.immitis:448 P.ramorum:448

J3K5X4              	100.00%		H3G9K2              	100.00%
Bootstrap support for J3K5X4 as seed ortholog is 100%.
Bootstrap support for H3G9K2 as seed ortholog is 100%.

Group of orthologs #318. Best score 447 bits
Score difference with first non-orthologous sequence - C.immitis:447 P.ramorum:447

J3KK20              	100.00%		H3G8E8              	100.00%
Bootstrap support for J3KK20 as seed ortholog is 100%.
Bootstrap support for H3G8E8 as seed ortholog is 100%.

Group of orthologs #319. Best score 446 bits
Score difference with first non-orthologous sequence - C.immitis:446 P.ramorum:446

J3K1F7              	100.00%		H3G7L0              	100.00%
Bootstrap support for J3K1F7 as seed ortholog is 100%.
Bootstrap support for H3G7L0 as seed ortholog is 100%.

Group of orthologs #320. Best score 446 bits
Score difference with first non-orthologous sequence - C.immitis:446 P.ramorum:446

J3KIF3              	100.00%		H3G632              	100.00%
Bootstrap support for J3KIF3 as seed ortholog is 100%.
Bootstrap support for H3G632 as seed ortholog is 100%.

Group of orthologs #321. Best score 446 bits
Score difference with first non-orthologous sequence - C.immitis:446 P.ramorum:446

Q1E406              	100.00%		H3G886              	100.00%
Bootstrap support for Q1E406 as seed ortholog is 100%.
Bootstrap support for H3G886 as seed ortholog is 100%.

Group of orthologs #322. Best score 446 bits
Score difference with first non-orthologous sequence - C.immitis:446 P.ramorum:446

J3KGM2              	100.00%		H3HE68              	100.00%
Bootstrap support for J3KGM2 as seed ortholog is 100%.
Bootstrap support for H3HE68 as seed ortholog is 100%.

Group of orthologs #323. Best score 444 bits
Score difference with first non-orthologous sequence - C.immitis:444 P.ramorum:444

J3KCS3              	100.00%		H3GAY8              	100.00%
Bootstrap support for J3KCS3 as seed ortholog is 100%.
Bootstrap support for H3GAY8 as seed ortholog is 100%.

Group of orthologs #324. Best score 444 bits
Score difference with first non-orthologous sequence - C.immitis:188 P.ramorum:137

J3K9T6              	100.00%		H3GY14              	100.00%
Bootstrap support for J3K9T6 as seed ortholog is 99%.
Bootstrap support for H3GY14 as seed ortholog is 99%.

Group of orthologs #325. Best score 443 bits
Score difference with first non-orthologous sequence - C.immitis:443 P.ramorum:443

J3KHV3              	100.00%		H3G851              	100.00%
                    	       		H3GBH1              	39.08%
Bootstrap support for J3KHV3 as seed ortholog is 100%.
Bootstrap support for H3G851 as seed ortholog is 100%.

Group of orthologs #326. Best score 442 bits
Score difference with first non-orthologous sequence - C.immitis:442 P.ramorum:27

J3K8T5              	100.00%		H3G9K6              	100.00%
Bootstrap support for J3K8T5 as seed ortholog is 100%.
Bootstrap support for H3G9K6 as seed ortholog is 75%.

Group of orthologs #327. Best score 441 bits
Score difference with first non-orthologous sequence - C.immitis:441 P.ramorum:441

J3K8K8              	100.00%		H3GR02              	100.00%
Bootstrap support for J3K8K8 as seed ortholog is 100%.
Bootstrap support for H3GR02 as seed ortholog is 100%.

Group of orthologs #328. Best score 440 bits
Score difference with first non-orthologous sequence - C.immitis:440 P.ramorum:332

J3K2A0              	100.00%		H3G5G7              	100.00%
Bootstrap support for J3K2A0 as seed ortholog is 100%.
Bootstrap support for H3G5G7 as seed ortholog is 100%.

Group of orthologs #329. Best score 440 bits
Score difference with first non-orthologous sequence - C.immitis:440 P.ramorum:440

I9NLC0              	100.00%		H3GK74              	100.00%
Bootstrap support for I9NLC0 as seed ortholog is 100%.
Bootstrap support for H3GK74 as seed ortholog is 100%.

Group of orthologs #330. Best score 440 bits
Score difference with first non-orthologous sequence - C.immitis:233 P.ramorum:440

Q1DUF9              	100.00%		H3GQ72              	100.00%
Bootstrap support for Q1DUF9 as seed ortholog is 99%.
Bootstrap support for H3GQ72 as seed ortholog is 100%.

Group of orthologs #331. Best score 440 bits
Score difference with first non-orthologous sequence - C.immitis:440 P.ramorum:440

Q1E101              	100.00%		H3GWU1              	100.00%
Bootstrap support for Q1E101 as seed ortholog is 100%.
Bootstrap support for H3GWU1 as seed ortholog is 100%.

Group of orthologs #332. Best score 439 bits
Score difference with first non-orthologous sequence - C.immitis:439 P.ramorum:439

J3KD22              	100.00%		H3G8E2              	100.00%
Bootstrap support for J3KD22 as seed ortholog is 100%.
Bootstrap support for H3G8E2 as seed ortholog is 100%.

Group of orthologs #333. Best score 439 bits
Score difference with first non-orthologous sequence - C.immitis:439 P.ramorum:439

J3KJ73              	100.00%		H3GWL4              	100.00%
Bootstrap support for J3KJ73 as seed ortholog is 100%.
Bootstrap support for H3GWL4 as seed ortholog is 100%.

Group of orthologs #334. Best score 438 bits
Score difference with first non-orthologous sequence - C.immitis:438 P.ramorum:438

J3KK78              	100.00%		H3GXM9              	100.00%
                    	       		H3GN43              	61.78%
                    	       		H3GLQ6              	20.91%
                    	       		H3GUE8              	17.03%
                    	       		H3GIY5              	10.97%
                    	       		H3GIY6              	10.95%
                    	       		H3GJ71              	6.63%
Bootstrap support for J3KK78 as seed ortholog is 100%.
Bootstrap support for H3GXM9 as seed ortholog is 100%.

Group of orthologs #335. Best score 438 bits
Score difference with first non-orthologous sequence - C.immitis:438 P.ramorum:438

J3KJ15              	100.00%		H3G8U5              	100.00%
                    	       		H3G9G9              	48.84%
                    	       		H3G9H0              	48.68%
Bootstrap support for J3KJ15 as seed ortholog is 100%.
Bootstrap support for H3G8U5 as seed ortholog is 100%.

Group of orthologs #336. Best score 438 bits
Score difference with first non-orthologous sequence - C.immitis:71 P.ramorum:438

J3KAC9              	100.00%		H3G979              	100.00%
                    	       		H3G6F1              	64.21%
Bootstrap support for J3KAC9 as seed ortholog is 95%.
Bootstrap support for H3G979 as seed ortholog is 100%.

Group of orthologs #337. Best score 437 bits
Score difference with first non-orthologous sequence - C.immitis:437 P.ramorum:437

J3KAX0              	100.00%		H3G947              	100.00%
Bootstrap support for J3KAX0 as seed ortholog is 100%.
Bootstrap support for H3G947 as seed ortholog is 100%.

Group of orthologs #338. Best score 436 bits
Score difference with first non-orthologous sequence - C.immitis:291 P.ramorum:209

J3KHB6              	100.00%		H3G8F5              	100.00%
Bootstrap support for J3KHB6 as seed ortholog is 100%.
Bootstrap support for H3G8F5 as seed ortholog is 100%.

Group of orthologs #339. Best score 435 bits
Score difference with first non-orthologous sequence - C.immitis:435 P.ramorum:435

J3K6W7              	100.00%		H3H1D0              	100.00%
J3K1A7              	21.74%		
J3K710              	13.10%		
Bootstrap support for J3K6W7 as seed ortholog is 100%.
Bootstrap support for H3H1D0 as seed ortholog is 100%.

Group of orthologs #340. Best score 435 bits
Score difference with first non-orthologous sequence - C.immitis:300 P.ramorum:303

J3KH70              	100.00%		H3GQ69              	100.00%
                    	       		H3G9H5              	90.57%
Bootstrap support for J3KH70 as seed ortholog is 100%.
Bootstrap support for H3GQ69 as seed ortholog is 100%.

Group of orthologs #341. Best score 435 bits
Score difference with first non-orthologous sequence - C.immitis:435 P.ramorum:435

J3K4Y0              	100.00%		H3G8D0              	100.00%
Bootstrap support for J3K4Y0 as seed ortholog is 100%.
Bootstrap support for H3G8D0 as seed ortholog is 100%.

Group of orthologs #342. Best score 435 bits
Score difference with first non-orthologous sequence - C.immitis:435 P.ramorum:168

J3KHG5              	100.00%		H3H2J8              	100.00%
Bootstrap support for J3KHG5 as seed ortholog is 100%.
Bootstrap support for H3H2J8 as seed ortholog is 99%.

Group of orthologs #343. Best score 433 bits
Score difference with first non-orthologous sequence - C.immitis:433 P.ramorum:433

J3KI25              	100.00%		H3GFN8              	100.00%
Bootstrap support for J3KI25 as seed ortholog is 100%.
Bootstrap support for H3GFN8 as seed ortholog is 100%.

Group of orthologs #344. Best score 431 bits
Score difference with first non-orthologous sequence - C.immitis:431 P.ramorum:431

I9XL53              	100.00%		H3G756              	100.00%
Bootstrap support for I9XL53 as seed ortholog is 100%.
Bootstrap support for H3G756 as seed ortholog is 100%.

Group of orthologs #345. Best score 431 bits
Score difference with first non-orthologous sequence - C.immitis:334 P.ramorum:40

J3KDH1              	100.00%		H3H1Y7              	100.00%
Bootstrap support for J3KDH1 as seed ortholog is 100%.
Bootstrap support for H3H1Y7 as seed ortholog is 75%.

Group of orthologs #346. Best score 430 bits
Score difference with first non-orthologous sequence - C.immitis:430 P.ramorum:430

Q1E1Q5              	100.00%		H3G8P9              	100.00%
                    	       		H3G5X2              	6.42%
Bootstrap support for Q1E1Q5 as seed ortholog is 100%.
Bootstrap support for H3G8P9 as seed ortholog is 100%.

Group of orthologs #347. Best score 430 bits
Score difference with first non-orthologous sequence - C.immitis:430 P.ramorum:430

J3KIR3              	100.00%		H3G9Q8              	100.00%
Bootstrap support for J3KIR3 as seed ortholog is 100%.
Bootstrap support for H3G9Q8 as seed ortholog is 100%.

Group of orthologs #348. Best score 429 bits
Score difference with first non-orthologous sequence - C.immitis:429 P.ramorum:429

E6PBQ0              	100.00%		H3GLS3              	100.00%
Bootstrap support for E6PBQ0 as seed ortholog is 100%.
Bootstrap support for H3GLS3 as seed ortholog is 100%.

Group of orthologs #349. Best score 429 bits
Score difference with first non-orthologous sequence - C.immitis:347 P.ramorum:368

J3KJS4              	100.00%		H3GA81              	100.00%
Bootstrap support for J3KJS4 as seed ortholog is 100%.
Bootstrap support for H3GA81 as seed ortholog is 100%.

Group of orthologs #350. Best score 428 bits
Score difference with first non-orthologous sequence - C.immitis:428 P.ramorum:428

J3K3P5              	100.00%		H3GPE9              	100.00%
Bootstrap support for J3K3P5 as seed ortholog is 100%.
Bootstrap support for H3GPE9 as seed ortholog is 100%.

Group of orthologs #351. Best score 426 bits
Score difference with first non-orthologous sequence - C.immitis:313 P.ramorum:325

J3KKL9              	100.00%		H3GKW5              	100.00%
                    	       		H3GKW6              	71.51%
                    	       		H3GKW7              	39.42%
Bootstrap support for J3KKL9 as seed ortholog is 100%.
Bootstrap support for H3GKW5 as seed ortholog is 100%.

Group of orthologs #352. Best score 426 bits
Score difference with first non-orthologous sequence - C.immitis:282 P.ramorum:119

J3KAF9              	100.00%		H3GZU5              	100.00%
                    	       		H3H6G7              	84.22%
Bootstrap support for J3KAF9 as seed ortholog is 100%.
Bootstrap support for H3GZU5 as seed ortholog is 99%.

Group of orthologs #353. Best score 426 bits
Score difference with first non-orthologous sequence - C.immitis:121 P.ramorum:426

J3K4E5              	100.00%		H3G8A9              	100.00%
Bootstrap support for J3K4E5 as seed ortholog is 99%.
Bootstrap support for H3G8A9 as seed ortholog is 100%.

Group of orthologs #354. Best score 426 bits
Score difference with first non-orthologous sequence - C.immitis:332 P.ramorum:310

J3K583              	100.00%		H3GAL0              	100.00%
Bootstrap support for J3K583 as seed ortholog is 100%.
Bootstrap support for H3GAL0 as seed ortholog is 100%.

Group of orthologs #355. Best score 426 bits
Score difference with first non-orthologous sequence - C.immitis:426 P.ramorum:426

J3K7V7              	100.00%		H3GPJ8              	100.00%
Bootstrap support for J3K7V7 as seed ortholog is 100%.
Bootstrap support for H3GPJ8 as seed ortholog is 100%.

Group of orthologs #356. Best score 425 bits
Score difference with first non-orthologous sequence - C.immitis:425 P.ramorum:425

J3KG27              	100.00%		H3G8E6              	100.00%
Bootstrap support for J3KG27 as seed ortholog is 100%.
Bootstrap support for H3G8E6 as seed ortholog is 100%.

Group of orthologs #357. Best score 423 bits
Score difference with first non-orthologous sequence - C.immitis:423 P.ramorum:60

J3KJB8              	100.00%		H3H542              	100.00%
                    	       		H3H433              	40.58%
                    	       		H3GZW0              	26.46%
                    	       		H3HA38              	5.08%
Bootstrap support for J3KJB8 as seed ortholog is 100%.
Bootstrap support for H3H542 as seed ortholog is 82%.

Group of orthologs #358. Best score 423 bits
Score difference with first non-orthologous sequence - C.immitis:371 P.ramorum:294

J3K5Z5              	100.00%		H3G7L4              	100.00%
Bootstrap support for J3K5Z5 as seed ortholog is 100%.
Bootstrap support for H3G7L4 as seed ortholog is 100%.

Group of orthologs #359. Best score 423 bits
Score difference with first non-orthologous sequence - C.immitis:423 P.ramorum:423

Q1DP77              	100.00%		H3GBM0              	100.00%
Bootstrap support for Q1DP77 as seed ortholog is 100%.
Bootstrap support for H3GBM0 as seed ortholog is 100%.

Group of orthologs #360. Best score 422 bits
Score difference with first non-orthologous sequence - C.immitis:271 P.ramorum:195

J3KB82              	100.00%		H3G8L6              	100.00%
                    	       		H3GAH4              	32.00%
Bootstrap support for J3KB82 as seed ortholog is 100%.
Bootstrap support for H3G8L6 as seed ortholog is 100%.

Group of orthologs #361. Best score 421 bits
Score difference with first non-orthologous sequence - C.immitis:188 P.ramorum:122

J3K5A9              	100.00%		H3GF94              	100.00%
                    	       		H3H076              	56.97%
Bootstrap support for J3K5A9 as seed ortholog is 99%.
Bootstrap support for H3GF94 as seed ortholog is 99%.

Group of orthologs #362. Best score 421 bits
Score difference with first non-orthologous sequence - C.immitis:421 P.ramorum:421

J3K8H1              	100.00%		H3GQR2              	100.00%
Bootstrap support for J3K8H1 as seed ortholog is 100%.
Bootstrap support for H3GQR2 as seed ortholog is 100%.

Group of orthologs #363. Best score 421 bits
Score difference with first non-orthologous sequence - C.immitis:421 P.ramorum:421

J3KM87              	100.00%		H3H4C8              	100.00%
Bootstrap support for J3KM87 as seed ortholog is 100%.
Bootstrap support for H3H4C8 as seed ortholog is 100%.

Group of orthologs #364. Best score 420 bits
Score difference with first non-orthologous sequence - C.immitis:420 P.ramorum:195

J3KAS2              	100.00%		H3GA84              	100.00%
                    	       		H3GA09              	11.23%
Bootstrap support for J3KAS2 as seed ortholog is 100%.
Bootstrap support for H3GA84 as seed ortholog is 99%.

Group of orthologs #365. Best score 420 bits
Score difference with first non-orthologous sequence - C.immitis:250 P.ramorum:231

J3KM48              	100.00%		H3G7T0              	100.00%
Bootstrap support for J3KM48 as seed ortholog is 100%.
Bootstrap support for H3G7T0 as seed ortholog is 100%.

Group of orthologs #366. Best score 419 bits
Score difference with first non-orthologous sequence - C.immitis:277 P.ramorum:65

J3K6L4              	100.00%		H3GWC2              	100.00%
Bootstrap support for J3K6L4 as seed ortholog is 100%.
Bootstrap support for H3GWC2 as seed ortholog is 88%.

Group of orthologs #367. Best score 418 bits
Score difference with first non-orthologous sequence - C.immitis:418 P.ramorum:222

J3KEB5              	100.00%		H3GGN6              	100.00%
J3KJG5              	15.42%		H3H2B5              	56.30%
                    	       		H3GGN3              	48.53%
                    	       		H3H2B7              	48.08%
                    	       		H3H2C0              	36.82%
                    	       		H3H2B8              	31.37%
                    	       		H3GBG4              	16.98%
Bootstrap support for J3KEB5 as seed ortholog is 100%.
Bootstrap support for H3GGN6 as seed ortholog is 99%.

Group of orthologs #368. Best score 418 bits
Score difference with first non-orthologous sequence - C.immitis:72 P.ramorum:149

J3K0Y3              	100.00%		H3G9N8              	100.00%
Bootstrap support for J3K0Y3 as seed ortholog is 98%.
Bootstrap support for H3G9N8 as seed ortholog is 100%.

Group of orthologs #369. Best score 418 bits
Score difference with first non-orthologous sequence - C.immitis:418 P.ramorum:418

J3K7Q7              	100.00%		H3GBZ0              	100.00%
Bootstrap support for J3K7Q7 as seed ortholog is 100%.
Bootstrap support for H3GBZ0 as seed ortholog is 100%.

Group of orthologs #370. Best score 418 bits
Score difference with first non-orthologous sequence - C.immitis:418 P.ramorum:418

J3K695              	100.00%		H3GU36              	100.00%
Bootstrap support for J3K695 as seed ortholog is 100%.
Bootstrap support for H3GU36 as seed ortholog is 100%.

Group of orthologs #371. Best score 417 bits
Score difference with first non-orthologous sequence - C.immitis:376 P.ramorum:340

J3KBU6              	100.00%		H3G8Z2              	100.00%
                    	       		H3G5L4              	78.81%
Bootstrap support for J3KBU6 as seed ortholog is 100%.
Bootstrap support for H3G8Z2 as seed ortholog is 100%.

Group of orthologs #372. Best score 416 bits
Score difference with first non-orthologous sequence - C.immitis:416 P.ramorum:416

J3K7S6              	100.00%		H3G957              	100.00%
Bootstrap support for J3K7S6 as seed ortholog is 100%.
Bootstrap support for H3G957 as seed ortholog is 100%.

Group of orthologs #373. Best score 416 bits
Score difference with first non-orthologous sequence - C.immitis:416 P.ramorum:416

J3KE43              	100.00%		H3G9L0              	100.00%
Bootstrap support for J3KE43 as seed ortholog is 100%.
Bootstrap support for H3G9L0 as seed ortholog is 100%.

Group of orthologs #374. Best score 416 bits
Score difference with first non-orthologous sequence - C.immitis:416 P.ramorum:416

J3KE22              	100.00%		H3GA76              	100.00%
Bootstrap support for J3KE22 as seed ortholog is 100%.
Bootstrap support for H3GA76 as seed ortholog is 100%.

Group of orthologs #375. Best score 415 bits
Score difference with first non-orthologous sequence - C.immitis:415 P.ramorum:415

J3KJM1              	100.00%		H3GCS0              	100.00%
Bootstrap support for J3KJM1 as seed ortholog is 100%.
Bootstrap support for H3GCS0 as seed ortholog is 100%.

Group of orthologs #376. Best score 415 bits
Score difference with first non-orthologous sequence - C.immitis:220 P.ramorum:219

J3KE75              	100.00%		H3GQX4              	100.00%
Bootstrap support for J3KE75 as seed ortholog is 100%.
Bootstrap support for H3GQX4 as seed ortholog is 100%.

Group of orthologs #377. Best score 413 bits
Score difference with first non-orthologous sequence - C.immitis:413 P.ramorum:332

J3K0C5              	100.00%		H3GHE4              	100.00%
Bootstrap support for J3K0C5 as seed ortholog is 100%.
Bootstrap support for H3GHE4 as seed ortholog is 100%.

Group of orthologs #378. Best score 413 bits
Score difference with first non-orthologous sequence - C.immitis:413 P.ramorum:413

J3KBK3              	100.00%		H3GAC0              	100.00%
Bootstrap support for J3KBK3 as seed ortholog is 100%.
Bootstrap support for H3GAC0 as seed ortholog is 100%.

Group of orthologs #379. Best score 412 bits
Score difference with first non-orthologous sequence - C.immitis:99 P.ramorum:246

J3K2S7              	100.00%		H3GRS2              	100.00%
Bootstrap support for J3K2S7 as seed ortholog is 97%.
Bootstrap support for H3GRS2 as seed ortholog is 99%.

Group of orthologs #380. Best score 412 bits
Score difference with first non-orthologous sequence - C.immitis:412 P.ramorum:412

J3KFJ6              	100.00%		H3GQY6              	100.00%
Bootstrap support for J3KFJ6 as seed ortholog is 100%.
Bootstrap support for H3GQY6 as seed ortholog is 100%.

Group of orthologs #381. Best score 411 bits
Score difference with first non-orthologous sequence - C.immitis:411 P.ramorum:214

J3K250              	100.00%		H3G8F6              	100.00%
                    	       		H3GED8              	62.39%
Bootstrap support for J3K250 as seed ortholog is 100%.
Bootstrap support for H3G8F6 as seed ortholog is 100%.

Group of orthologs #382. Best score 411 bits
Score difference with first non-orthologous sequence - C.immitis:411 P.ramorum:217

J0HHX9              	100.00%		H3G9M8              	100.00%
Bootstrap support for J0HHX9 as seed ortholog is 100%.
Bootstrap support for H3G9M8 as seed ortholog is 100%.

Group of orthologs #383. Best score 411 bits
Score difference with first non-orthologous sequence - C.immitis:366 P.ramorum:305

J3K6I5              	100.00%		H3G6K0              	100.00%
Bootstrap support for J3K6I5 as seed ortholog is 100%.
Bootstrap support for H3G6K0 as seed ortholog is 100%.

Group of orthologs #384. Best score 410 bits
Score difference with first non-orthologous sequence - C.immitis:410 P.ramorum:209

J3K7T7              	100.00%		H3G5K2              	100.00%
Bootstrap support for J3K7T7 as seed ortholog is 100%.
Bootstrap support for H3G5K2 as seed ortholog is 100%.

Group of orthologs #385. Best score 409 bits
Score difference with first non-orthologous sequence - C.immitis:409 P.ramorum:409

J3KKM2              	100.00%		H3GK49              	100.00%
Bootstrap support for J3KKM2 as seed ortholog is 100%.
Bootstrap support for H3GK49 as seed ortholog is 100%.

Group of orthologs #386. Best score 408 bits
Score difference with first non-orthologous sequence - C.immitis:408 P.ramorum:289

I9XMD5              	100.00%		H3G9J9              	100.00%
Bootstrap support for I9XMD5 as seed ortholog is 100%.
Bootstrap support for H3G9J9 as seed ortholog is 100%.

Group of orthologs #387. Best score 408 bits
Score difference with first non-orthologous sequence - C.immitis:408 P.ramorum:297

J3KGG6              	100.00%		H3H038              	100.00%
Bootstrap support for J3KGG6 as seed ortholog is 100%.
Bootstrap support for H3H038 as seed ortholog is 100%.

Group of orthologs #388. Best score 407 bits
Score difference with first non-orthologous sequence - C.immitis:264 P.ramorum:175

J3KGT2              	100.00%		H3G9R3              	100.00%
Bootstrap support for J3KGT2 as seed ortholog is 100%.
Bootstrap support for H3G9R3 as seed ortholog is 99%.

Group of orthologs #389. Best score 407 bits
Score difference with first non-orthologous sequence - C.immitis:407 P.ramorum:407

J3KD08              	100.00%		H3GNL8              	100.00%
Bootstrap support for J3KD08 as seed ortholog is 100%.
Bootstrap support for H3GNL8 as seed ortholog is 100%.

Group of orthologs #390. Best score 406 bits
Score difference with first non-orthologous sequence - C.immitis:406 P.ramorum:333

J3K8Y3              	100.00%		H3G6T4              	100.00%
                    	       		H3GQ77              	50.43%
Bootstrap support for J3K8Y3 as seed ortholog is 100%.
Bootstrap support for H3G6T4 as seed ortholog is 100%.

Group of orthologs #391. Best score 405 bits
Score difference with first non-orthologous sequence - C.immitis:295 P.ramorum:233

J3K140              	100.00%		H3G5D1              	100.00%
Bootstrap support for J3K140 as seed ortholog is 100%.
Bootstrap support for H3G5D1 as seed ortholog is 100%.

Group of orthologs #392. Best score 405 bits
Score difference with first non-orthologous sequence - C.immitis:405 P.ramorum:405

J0HHZ2              	100.00%		H3H0X1              	100.00%
Bootstrap support for J0HHZ2 as seed ortholog is 100%.
Bootstrap support for H3H0X1 as seed ortholog is 100%.

Group of orthologs #393. Best score 404 bits
Score difference with first non-orthologous sequence - C.immitis:1 P.ramorum:164

J3KJN6              	100.00%		H3G9X7              	100.00%
Bootstrap support for J3KJN6 as seed ortholog is 49%.
Alternative seed ortholog is J3KDT7 (1 bits away from this cluster)
Bootstrap support for H3G9X7 as seed ortholog is 100%.

Group of orthologs #394. Best score 404 bits
Score difference with first non-orthologous sequence - C.immitis:404 P.ramorum:404

J3KM61              	100.00%		H3G8B8              	100.00%
Bootstrap support for J3KM61 as seed ortholog is 100%.
Bootstrap support for H3G8B8 as seed ortholog is 100%.

Group of orthologs #395. Best score 401 bits
Score difference with first non-orthologous sequence - C.immitis:401 P.ramorum:401

J3KFF1              	100.00%		H3GKE7              	100.00%
                    	       		H3HAI9              	100.00%
Bootstrap support for J3KFF1 as seed ortholog is 100%.
Bootstrap support for H3GKE7 as seed ortholog is 100%.
Bootstrap support for H3HAI9 as seed ortholog is 100%.

Group of orthologs #396. Best score 401 bits
Score difference with first non-orthologous sequence - C.immitis:401 P.ramorum:401

J3K8L5              	100.00%		H3G4Y5              	100.00%
Bootstrap support for J3K8L5 as seed ortholog is 100%.
Bootstrap support for H3G4Y5 as seed ortholog is 100%.

Group of orthologs #397. Best score 401 bits
Score difference with first non-orthologous sequence - C.immitis:92 P.ramorum:171

J3KIP9              	100.00%		H3G8W1              	100.00%
Bootstrap support for J3KIP9 as seed ortholog is 93%.
Bootstrap support for H3G8W1 as seed ortholog is 99%.

Group of orthologs #398. Best score 401 bits
Score difference with first non-orthologous sequence - C.immitis:401 P.ramorum:401

Q1DLJ4              	100.00%		H3G5V8              	100.00%
Bootstrap support for Q1DLJ4 as seed ortholog is 100%.
Bootstrap support for H3G5V8 as seed ortholog is 100%.

Group of orthologs #399. Best score 400 bits
Score difference with first non-orthologous sequence - C.immitis:400 P.ramorum:170

J3K5C0              	100.00%		H3G8L0              	100.00%
                    	       		H3G8K8              	77.69%
Bootstrap support for J3K5C0 as seed ortholog is 100%.
Bootstrap support for H3G8L0 as seed ortholog is 99%.

Group of orthologs #400. Best score 399 bits
Score difference with first non-orthologous sequence - C.immitis:399 P.ramorum:399

J3K147              	100.00%		H3G761              	100.00%
J3KDT9              	13.57%		H3G8E3              	12.50%
                    	       		H3GAC6              	10.58%
Bootstrap support for J3K147 as seed ortholog is 100%.
Bootstrap support for H3G761 as seed ortholog is 100%.

Group of orthologs #401. Best score 399 bits
Score difference with first non-orthologous sequence - C.immitis:399 P.ramorum:399

J3KJ93              	100.00%		H3G9H1              	100.00%
Bootstrap support for J3KJ93 as seed ortholog is 100%.
Bootstrap support for H3G9H1 as seed ortholog is 100%.

Group of orthologs #402. Best score 399 bits
Score difference with first non-orthologous sequence - C.immitis:399 P.ramorum:399

J3KCY2              	100.00%		H3GK30              	100.00%
Bootstrap support for J3KCY2 as seed ortholog is 100%.
Bootstrap support for H3GK30 as seed ortholog is 100%.

Group of orthologs #403. Best score 398 bits
Score difference with first non-orthologous sequence - C.immitis:398 P.ramorum:398

J3KJB0              	100.00%		H3G5C7              	100.00%
Bootstrap support for J3KJB0 as seed ortholog is 100%.
Bootstrap support for H3G5C7 as seed ortholog is 100%.

Group of orthologs #404. Best score 397 bits
Score difference with first non-orthologous sequence - C.immitis:397 P.ramorum:397

J3K671              	100.00%		H3G928              	100.00%
Bootstrap support for J3K671 as seed ortholog is 100%.
Bootstrap support for H3G928 as seed ortholog is 100%.

Group of orthologs #405. Best score 396 bits
Score difference with first non-orthologous sequence - C.immitis:396 P.ramorum:274

J3KDW5              	100.00%		H3GLQ1              	100.00%
Bootstrap support for J3KDW5 as seed ortholog is 100%.
Bootstrap support for H3GLQ1 as seed ortholog is 100%.

Group of orthologs #406. Best score 395 bits
Score difference with first non-orthologous sequence - C.immitis:395 P.ramorum:395

J3K843              	100.00%		H3HAP6              	100.00%
                    	       		H3G4X5              	68.04%
Bootstrap support for J3K843 as seed ortholog is 100%.
Bootstrap support for H3HAP6 as seed ortholog is 100%.

Group of orthologs #407. Best score 394 bits
Score difference with first non-orthologous sequence - C.immitis:394 P.ramorum:394

J3KBE4              	100.00%		H3GV61              	100.00%
                    	       		H3G7E1              	58.42%
Bootstrap support for J3KBE4 as seed ortholog is 100%.
Bootstrap support for H3GV61 as seed ortholog is 100%.

Group of orthologs #408. Best score 394 bits
Score difference with first non-orthologous sequence - C.immitis:394 P.ramorum:394

J3KFM4              	100.00%		H3G8K7              	100.00%
Bootstrap support for J3KFM4 as seed ortholog is 100%.
Bootstrap support for H3G8K7 as seed ortholog is 100%.

Group of orthologs #409. Best score 394 bits
Score difference with first non-orthologous sequence - C.immitis:394 P.ramorum:292

J3KCV6              	100.00%		H3GNG9              	100.00%
Bootstrap support for J3KCV6 as seed ortholog is 100%.
Bootstrap support for H3GNG9 as seed ortholog is 100%.

Group of orthologs #410. Best score 393 bits
Score difference with first non-orthologous sequence - C.immitis:393 P.ramorum:393

J3KEQ5              	100.00%		H3GWU6              	100.00%
Bootstrap support for J3KEQ5 as seed ortholog is 100%.
Bootstrap support for H3GWU6 as seed ortholog is 100%.

Group of orthologs #411. Best score 392 bits
Score difference with first non-orthologous sequence - C.immitis:92 P.ramorum:289

J3K1W4              	100.00%		H3GER8              	100.00%
Bootstrap support for J3K1W4 as seed ortholog is 99%.
Bootstrap support for H3GER8 as seed ortholog is 100%.

Group of orthologs #412. Best score 392 bits
Score difference with first non-orthologous sequence - C.immitis:392 P.ramorum:303

J3KED7              	100.00%		H3GHW1              	100.00%
Bootstrap support for J3KED7 as seed ortholog is 100%.
Bootstrap support for H3GHW1 as seed ortholog is 100%.

Group of orthologs #413. Best score 391 bits
Score difference with first non-orthologous sequence - C.immitis:391 P.ramorum:391

J3K8X6              	100.00%		H3G7Z2              	100.00%
Bootstrap support for J3K8X6 as seed ortholog is 100%.
Bootstrap support for H3G7Z2 as seed ortholog is 100%.

Group of orthologs #414. Best score 391 bits
Score difference with first non-orthologous sequence - C.immitis:44 P.ramorum:153

J3KLB8              	100.00%		H3G8E1              	100.00%
Bootstrap support for J3KLB8 as seed ortholog is 88%.
Bootstrap support for H3G8E1 as seed ortholog is 99%.

Group of orthologs #415. Best score 390 bits
Score difference with first non-orthologous sequence - C.immitis:275 P.ramorum:114

J3K745              	100.00%		H3GD15              	100.00%
Bootstrap support for J3K745 as seed ortholog is 100%.
Bootstrap support for H3GD15 as seed ortholog is 98%.

Group of orthologs #416. Best score 389 bits
Score difference with first non-orthologous sequence - C.immitis:389 P.ramorum:149

I9NSN2              	100.00%		H3G8X2              	100.00%
Bootstrap support for I9NSN2 as seed ortholog is 100%.
Bootstrap support for H3G8X2 as seed ortholog is 99%.

Group of orthologs #417. Best score 389 bits
Score difference with first non-orthologous sequence - C.immitis:53 P.ramorum:233

J3K435              	100.00%		H3G8T0              	100.00%
Bootstrap support for J3K435 as seed ortholog is 75%.
Bootstrap support for H3G8T0 as seed ortholog is 100%.

Group of orthologs #418. Best score 389 bits
Score difference with first non-orthologous sequence - C.immitis:389 P.ramorum:389

J3KA84              	100.00%		H3G6P3              	100.00%
Bootstrap support for J3KA84 as seed ortholog is 100%.
Bootstrap support for H3G6P3 as seed ortholog is 100%.

Group of orthologs #419. Best score 389 bits
Score difference with first non-orthologous sequence - C.immitis:389 P.ramorum:389

J3KHA4              	100.00%		H3GCM4              	100.00%
Bootstrap support for J3KHA4 as seed ortholog is 100%.
Bootstrap support for H3GCM4 as seed ortholog is 100%.

Group of orthologs #420. Best score 389 bits
Score difference with first non-orthologous sequence - C.immitis:389 P.ramorum:389

J3KEZ9              	100.00%		H3GG11              	100.00%
Bootstrap support for J3KEZ9 as seed ortholog is 100%.
Bootstrap support for H3GG11 as seed ortholog is 100%.

Group of orthologs #421. Best score 388 bits
Score difference with first non-orthologous sequence - C.immitis:388 P.ramorum:388

Q1E167              	100.00%		H3G8W6              	100.00%
Bootstrap support for Q1E167 as seed ortholog is 100%.
Bootstrap support for H3G8W6 as seed ortholog is 100%.

Group of orthologs #422. Best score 388 bits
Score difference with first non-orthologous sequence - C.immitis:214 P.ramorum:219

Q1DWF4              	100.00%		H3GBC9              	100.00%
Bootstrap support for Q1DWF4 as seed ortholog is 100%.
Bootstrap support for H3GBC9 as seed ortholog is 100%.

Group of orthologs #423. Best score 387 bits
Score difference with first non-orthologous sequence - C.immitis:387 P.ramorum:387

I9NN23              	100.00%		H3GSD4              	100.00%
Bootstrap support for I9NN23 as seed ortholog is 100%.
Bootstrap support for H3GSD4 as seed ortholog is 100%.

Group of orthologs #424. Best score 387 bits
Score difference with first non-orthologous sequence - C.immitis:387 P.ramorum:387

J3K2I2              	100.00%		H3GPL3              	100.00%
Bootstrap support for J3K2I2 as seed ortholog is 100%.
Bootstrap support for H3GPL3 as seed ortholog is 100%.

Group of orthologs #425. Best score 386 bits
Score difference with first non-orthologous sequence - C.immitis:386 P.ramorum:56

J3K5D2              	100.00%		H3GAP1              	100.00%
                    	       		H3GAQ6              	86.71%
                    	       		H3H2B2              	75.70%
                    	       		H3GAQ9              	75.35%
                    	       		H3H2B4              	75.35%
                    	       		H3G6W1              	18.18%
Bootstrap support for J3K5D2 as seed ortholog is 100%.
Bootstrap support for H3GAP1 as seed ortholog is 89%.

Group of orthologs #426. Best score 386 bits
Score difference with first non-orthologous sequence - C.immitis:296 P.ramorum:334

I9NKM6              	100.00%		H3G5N8              	100.00%
Bootstrap support for I9NKM6 as seed ortholog is 100%.
Bootstrap support for H3G5N8 as seed ortholog is 100%.

Group of orthologs #427. Best score 386 bits
Score difference with first non-orthologous sequence - C.immitis:386 P.ramorum:386

J3K5Z9              	100.00%		H3G8M7              	100.00%
Bootstrap support for J3K5Z9 as seed ortholog is 100%.
Bootstrap support for H3G8M7 as seed ortholog is 100%.

Group of orthologs #428. Best score 386 bits
Score difference with first non-orthologous sequence - C.immitis:386 P.ramorum:386

J3K5Q8              	100.00%		H3GMC4              	100.00%
Bootstrap support for J3K5Q8 as seed ortholog is 100%.
Bootstrap support for H3GMC4 as seed ortholog is 100%.

Group of orthologs #429. Best score 386 bits
Score difference with first non-orthologous sequence - C.immitis:386 P.ramorum:386

J3KJ56              	100.00%		H3GAU7              	100.00%
Bootstrap support for J3KJ56 as seed ortholog is 100%.
Bootstrap support for H3GAU7 as seed ortholog is 100%.

Group of orthologs #430. Best score 386 bits
Score difference with first non-orthologous sequence - C.immitis:386 P.ramorum:180

J3KA74              	100.00%		H3HAS3              	100.00%
Bootstrap support for J3KA74 as seed ortholog is 100%.
Bootstrap support for H3HAS3 as seed ortholog is 99%.

Group of orthologs #431. Best score 385 bits
Score difference with first non-orthologous sequence - C.immitis:385 P.ramorum:385

J0HEU4              	100.00%		H3GW62              	100.00%
Bootstrap support for J0HEU4 as seed ortholog is 100%.
Bootstrap support for H3GW62 as seed ortholog is 100%.

Group of orthologs #432. Best score 385 bits
Score difference with first non-orthologous sequence - C.immitis:385 P.ramorum:267

J3KDZ8              	100.00%		H3GZB3              	100.00%
Bootstrap support for J3KDZ8 as seed ortholog is 100%.
Bootstrap support for H3GZB3 as seed ortholog is 100%.

Group of orthologs #433. Best score 385 bits
Score difference with first non-orthologous sequence - C.immitis:385 P.ramorum:385

J3K489              	100.00%		H3HCQ5              	100.00%
Bootstrap support for J3K489 as seed ortholog is 100%.
Bootstrap support for H3HCQ5 as seed ortholog is 100%.

Group of orthologs #434. Best score 383 bits
Score difference with first non-orthologous sequence - C.immitis:383 P.ramorum:383

J3K7N1              	100.00%		H3GNU0              	100.00%
Bootstrap support for J3K7N1 as seed ortholog is 100%.
Bootstrap support for H3GNU0 as seed ortholog is 100%.

Group of orthologs #435. Best score 382 bits
Score difference with first non-orthologous sequence - C.immitis:278 P.ramorum:382

J3KDG0              	100.00%		H3G9V7              	100.00%
Bootstrap support for J3KDG0 as seed ortholog is 100%.
Bootstrap support for H3G9V7 as seed ortholog is 100%.

Group of orthologs #436. Best score 382 bits
Score difference with first non-orthologous sequence - C.immitis:164 P.ramorum:382

J3KL80              	100.00%		H3GAC3              	100.00%
Bootstrap support for J3KL80 as seed ortholog is 99%.
Bootstrap support for H3GAC3 as seed ortholog is 100%.

Group of orthologs #437. Best score 381 bits
Score difference with first non-orthologous sequence - C.immitis:305 P.ramorum:381

J3K0C3              	100.00%		H3G8Y5              	100.00%
Bootstrap support for J3K0C3 as seed ortholog is 100%.
Bootstrap support for H3G8Y5 as seed ortholog is 100%.

Group of orthologs #438. Best score 381 bits
Score difference with first non-orthologous sequence - C.immitis:381 P.ramorum:381

J3KAJ3              	100.00%		H3GPE0              	100.00%
Bootstrap support for J3KAJ3 as seed ortholog is 100%.
Bootstrap support for H3GPE0 as seed ortholog is 100%.

Group of orthologs #439. Best score 380 bits
Score difference with first non-orthologous sequence - C.immitis:380 P.ramorum:380

J3K8X1              	100.00%		H3G6Y2              	100.00%
Bootstrap support for J3K8X1 as seed ortholog is 100%.
Bootstrap support for H3G6Y2 as seed ortholog is 100%.

Group of orthologs #440. Best score 380 bits
Score difference with first non-orthologous sequence - C.immitis:380 P.ramorum:380

J3KMA8              	100.00%		H3GJS1              	100.00%
Bootstrap support for J3KMA8 as seed ortholog is 100%.
Bootstrap support for H3GJS1 as seed ortholog is 100%.

Group of orthologs #441. Best score 379 bits
Score difference with first non-orthologous sequence - C.immitis:257 P.ramorum:379

J3KEL1              	100.00%		H3G8K3              	100.00%
J3KKC9              	100.00%		
Bootstrap support for J3KEL1 as seed ortholog is 100%.
Bootstrap support for J3KKC9 as seed ortholog is 100%.
Bootstrap support for H3G8K3 as seed ortholog is 100%.

Group of orthologs #442. Best score 378 bits
Score difference with first non-orthologous sequence - C.immitis:12 P.ramorum:68

J3KK46              	100.00%		H3GG23              	100.00%
                    	       		B9VTN8              	10.71%
Bootstrap support for J3KK46 as seed ortholog is 37%.
Alternative seed ortholog is J3KKS3 (12 bits away from this cluster)
Bootstrap support for H3GG23 as seed ortholog is 96%.

Group of orthologs #443. Best score 378 bits
Score difference with first non-orthologous sequence - C.immitis:378 P.ramorum:378

J3KA06              	100.00%		H3GCA4              	100.00%
Bootstrap support for J3KA06 as seed ortholog is 100%.
Bootstrap support for H3GCA4 as seed ortholog is 100%.

Group of orthologs #444. Best score 377 bits
Score difference with first non-orthologous sequence - C.immitis:377 P.ramorum:75

Q1DVD1              	100.00%		H3GUW2              	100.00%
                    	       		H3G7C3              	44.59%
Bootstrap support for Q1DVD1 as seed ortholog is 100%.
Bootstrap support for H3GUW2 as seed ortholog is 90%.

Group of orthologs #445. Best score 376 bits
Score difference with first non-orthologous sequence - C.immitis:376 P.ramorum:376

J3K4L0              	100.00%		H3GLM4              	100.00%
                    	       		H3GLM0              	49.90%
                    	       		H3GLM3              	39.18%
                    	       		H3GLN2              	28.59%
Bootstrap support for J3K4L0 as seed ortholog is 100%.
Bootstrap support for H3GLM4 as seed ortholog is 100%.

Group of orthologs #446. Best score 376 bits
Score difference with first non-orthologous sequence - C.immitis:376 P.ramorum:128

J3KH50              	100.00%		H3GHW8              	100.00%
Bootstrap support for J3KH50 as seed ortholog is 100%.
Bootstrap support for H3GHW8 as seed ortholog is 99%.

Group of orthologs #447. Best score 374 bits
Score difference with first non-orthologous sequence - C.immitis:85 P.ramorum:35

I9NMD2              	100.00%		H3GA53              	100.00%
J3KKI5              	26.55%		H3GWZ3              	100.00%
                    	       		H3GWZ5              	66.70%
                    	       		H3GA52              	64.69%
                    	       		H3GAW6              	47.72%
                    	       		H3GAL7              	39.34%
                    	       		H3G5D4              	27.25%
Bootstrap support for I9NMD2 as seed ortholog is 95%.
Bootstrap support for H3GA53 as seed ortholog is 74%.
Alternative seed ortholog is H3GCK8 (35 bits away from this cluster)
Bootstrap support for H3GWZ3 as seed ortholog is 71%.
Alternative seed ortholog is H3GCK8 (35 bits away from this cluster)

Group of orthologs #448. Best score 374 bits
Score difference with first non-orthologous sequence - C.immitis:374 P.ramorum:374

J3K0W8              	100.00%		H3G5W3              	100.00%
Bootstrap support for J3K0W8 as seed ortholog is 100%.
Bootstrap support for H3G5W3 as seed ortholog is 100%.

Group of orthologs #449. Best score 374 bits
Score difference with first non-orthologous sequence - C.immitis:374 P.ramorum:374

J3K9X8              	100.00%		H3GDK0              	100.00%
Bootstrap support for J3K9X8 as seed ortholog is 100%.
Bootstrap support for H3GDK0 as seed ortholog is 100%.

Group of orthologs #450. Best score 374 bits
Score difference with first non-orthologous sequence - C.immitis:326 P.ramorum:293

J3KIB5              	100.00%		H3GIL8              	100.00%
Bootstrap support for J3KIB5 as seed ortholog is 100%.
Bootstrap support for H3GIL8 as seed ortholog is 100%.

Group of orthologs #451. Best score 373 bits
Score difference with first non-orthologous sequence - C.immitis:373 P.ramorum:373

J3K0Q0              	100.00%		H3G5Z6              	100.00%
Bootstrap support for J3K0Q0 as seed ortholog is 100%.
Bootstrap support for H3G5Z6 as seed ortholog is 100%.

Group of orthologs #452. Best score 373 bits
Score difference with first non-orthologous sequence - C.immitis:373 P.ramorum:373

Q1DX43              	100.00%		H3GVL6              	100.00%
Bootstrap support for Q1DX43 as seed ortholog is 100%.
Bootstrap support for H3GVL6 as seed ortholog is 100%.

Group of orthologs #453. Best score 372 bits
Score difference with first non-orthologous sequence - C.immitis:372 P.ramorum:372

J3KM72              	100.00%		H3GF02              	100.00%
                    	       		H3GF01              	21.57%
Bootstrap support for J3KM72 as seed ortholog is 100%.
Bootstrap support for H3GF02 as seed ortholog is 100%.

Group of orthologs #454. Best score 372 bits
Score difference with first non-orthologous sequence - C.immitis:372 P.ramorum:372

J3KDP4              	100.00%		H3GHB8              	100.00%
Bootstrap support for J3KDP4 as seed ortholog is 100%.
Bootstrap support for H3GHB8 as seed ortholog is 100%.

Group of orthologs #455. Best score 371 bits
Score difference with first non-orthologous sequence - C.immitis:371 P.ramorum:371

J3KH31              	100.00%		H3G9W9              	100.00%
Bootstrap support for J3KH31 as seed ortholog is 100%.
Bootstrap support for H3G9W9 as seed ortholog is 100%.

Group of orthologs #456. Best score 371 bits
Score difference with first non-orthologous sequence - C.immitis:371 P.ramorum:371

J3KJL3              	100.00%		H3G943              	100.00%
Bootstrap support for J3KJL3 as seed ortholog is 100%.
Bootstrap support for H3G943 as seed ortholog is 100%.

Group of orthologs #457. Best score 370 bits
Score difference with first non-orthologous sequence - C.immitis:370 P.ramorum:287

J3K5B6              	100.00%		H3GUK7              	100.00%
Bootstrap support for J3K5B6 as seed ortholog is 100%.
Bootstrap support for H3GUK7 as seed ortholog is 100%.

Group of orthologs #458. Best score 369 bits
Score difference with first non-orthologous sequence - C.immitis:369 P.ramorum:369

J3K1L3              	100.00%		H3GA60              	100.00%
                    	       		H3GXA3              	39.52%
Bootstrap support for J3K1L3 as seed ortholog is 100%.
Bootstrap support for H3GA60 as seed ortholog is 100%.

Group of orthologs #459. Best score 369 bits
Score difference with first non-orthologous sequence - C.immitis:369 P.ramorum:369

J3KJ59              	100.00%		H3GAG0              	100.00%
Bootstrap support for J3KJ59 as seed ortholog is 100%.
Bootstrap support for H3GAG0 as seed ortholog is 100%.

Group of orthologs #460. Best score 369 bits
Score difference with first non-orthologous sequence - C.immitis:369 P.ramorum:369

J3KJ84              	100.00%		H3GYJ5              	100.00%
Bootstrap support for J3KJ84 as seed ortholog is 100%.
Bootstrap support for H3GYJ5 as seed ortholog is 100%.

Group of orthologs #461. Best score 368 bits
Score difference with first non-orthologous sequence - C.immitis:17 P.ramorum:368

J3K4E3              	100.00%		H3GL68              	100.00%
Bootstrap support for J3K4E3 as seed ortholog is 65%.
Alternative seed ortholog is J3KB69 (17 bits away from this cluster)
Bootstrap support for H3GL68 as seed ortholog is 100%.

Group of orthologs #462. Best score 367 bits
Score difference with first non-orthologous sequence - C.immitis:367 P.ramorum:367

J3K2Y5              	100.00%		H3HDI3              	100.00%
Bootstrap support for J3K2Y5 as seed ortholog is 100%.
Bootstrap support for H3HDI3 as seed ortholog is 100%.

Group of orthologs #463. Best score 366 bits
Score difference with first non-orthologous sequence - C.immitis:366 P.ramorum:196

J3K7Q1              	100.00%		H3GV09              	100.00%
Bootstrap support for J3K7Q1 as seed ortholog is 100%.
Bootstrap support for H3GV09 as seed ortholog is 99%.

Group of orthologs #464. Best score 365 bits
Score difference with first non-orthologous sequence - C.immitis:86 P.ramorum:365

J3K7Y3              	100.00%		H3G9A7              	100.00%
J3KGH6              	5.23%		H3GAY7              	94.02%
J3K9U2              	5.04%		H3G8Q5              	64.24%
Bootstrap support for J3K7Y3 as seed ortholog is 92%.
Bootstrap support for H3G9A7 as seed ortholog is 100%.

Group of orthologs #465. Best score 365 bits
Score difference with first non-orthologous sequence - C.immitis:365 P.ramorum:365

J3K5D9              	100.00%		H3GLL2              	100.00%
Bootstrap support for J3K5D9 as seed ortholog is 100%.
Bootstrap support for H3GLL2 as seed ortholog is 100%.

Group of orthologs #466. Best score 364 bits
Score difference with first non-orthologous sequence - C.immitis:81 P.ramorum:208

J3K8F0              	100.00%		H3GRK5              	100.00%
                    	       		H3G6L5              	50.25%
                    	       		H3G8A1              	41.83%
                    	       		H3GRK8              	30.66%
                    	       		H3GRN4              	30.56%
                    	       		H3GRL0              	20.10%
Bootstrap support for J3K8F0 as seed ortholog is 94%.
Bootstrap support for H3GRK5 as seed ortholog is 99%.

Group of orthologs #467. Best score 364 bits
Score difference with first non-orthologous sequence - C.immitis:364 P.ramorum:267

J0HF35              	100.00%		H3GB43              	100.00%
Bootstrap support for J0HF35 as seed ortholog is 100%.
Bootstrap support for H3GB43 as seed ortholog is 100%.

Group of orthologs #468. Best score 364 bits
Score difference with first non-orthologous sequence - C.immitis:133 P.ramorum:233

J3K2C6              	100.00%		H3GDM7              	100.00%
Bootstrap support for J3K2C6 as seed ortholog is 98%.
Bootstrap support for H3GDM7 as seed ortholog is 99%.

Group of orthologs #469. Best score 362 bits
Score difference with first non-orthologous sequence - C.immitis:362 P.ramorum:103

I9NPB4              	100.00%		H3GCU1              	100.00%
Bootstrap support for I9NPB4 as seed ortholog is 100%.
Bootstrap support for H3GCU1 as seed ortholog is 95%.

Group of orthologs #470. Best score 362 bits
Score difference with first non-orthologous sequence - C.immitis:295 P.ramorum:210

J3KM45              	100.00%		H3G6P7              	100.00%
Bootstrap support for J3KM45 as seed ortholog is 100%.
Bootstrap support for H3G6P7 as seed ortholog is 99%.

Group of orthologs #471. Best score 362 bits
Score difference with first non-orthologous sequence - C.immitis:362 P.ramorum:362

J3KG11              	100.00%		H3GXX3              	100.00%
Bootstrap support for J3KG11 as seed ortholog is 100%.
Bootstrap support for H3GXX3 as seed ortholog is 100%.

Group of orthologs #472. Best score 361 bits
Score difference with first non-orthologous sequence - C.immitis:361 P.ramorum:361

J3K9D3              	100.00%		H3GJC3              	100.00%
Bootstrap support for J3K9D3 as seed ortholog is 100%.
Bootstrap support for H3GJC3 as seed ortholog is 100%.

Group of orthologs #473. Best score 361 bits
Score difference with first non-orthologous sequence - C.immitis:361 P.ramorum:361

J0HFH6              	100.00%		H3GWN7              	100.00%
Bootstrap support for J0HFH6 as seed ortholog is 100%.
Bootstrap support for H3GWN7 as seed ortholog is 100%.

Group of orthologs #474. Best score 361 bits
Score difference with first non-orthologous sequence - C.immitis:361 P.ramorum:361

Q1DLC7              	100.00%		H3GBN6              	100.00%
Bootstrap support for Q1DLC7 as seed ortholog is 100%.
Bootstrap support for H3GBN6 as seed ortholog is 100%.

Group of orthologs #475. Best score 361 bits
Score difference with first non-orthologous sequence - C.immitis:184 P.ramorum:212

Q1E9T9              	100.00%		H3GMA5              	100.00%
Bootstrap support for Q1E9T9 as seed ortholog is 99%.
Bootstrap support for H3GMA5 as seed ortholog is 100%.

Group of orthologs #476. Best score 361 bits
Score difference with first non-orthologous sequence - C.immitis:361 P.ramorum:361

J3K2Z4              	100.00%		H3HCZ8              	100.00%
Bootstrap support for J3K2Z4 as seed ortholog is 100%.
Bootstrap support for H3HCZ8 as seed ortholog is 100%.

Group of orthologs #477. Best score 360 bits
Score difference with first non-orthologous sequence - C.immitis:360 P.ramorum:360

J3K417              	100.00%		H3GGW8              	100.00%
Bootstrap support for J3K417 as seed ortholog is 100%.
Bootstrap support for H3GGW8 as seed ortholog is 100%.

Group of orthologs #478. Best score 360 bits
Score difference with first non-orthologous sequence - C.immitis:152 P.ramorum:360

J3K4G1              	100.00%		H3GW83              	100.00%
Bootstrap support for J3K4G1 as seed ortholog is 99%.
Bootstrap support for H3GW83 as seed ortholog is 100%.

Group of orthologs #479. Best score 360 bits
Score difference with first non-orthologous sequence - C.immitis:360 P.ramorum:120

J3KBF0              	100.00%		H3HAP2              	100.00%
Bootstrap support for J3KBF0 as seed ortholog is 100%.
Bootstrap support for H3HAP2 as seed ortholog is 94%.

Group of orthologs #480. Best score 359 bits
Score difference with first non-orthologous sequence - C.immitis:359 P.ramorum:359

J3K0H4              	100.00%		H3G6F3              	100.00%
Bootstrap support for J3K0H4 as seed ortholog is 100%.
Bootstrap support for H3G6F3 as seed ortholog is 100%.

Group of orthologs #481. Best score 359 bits
Score difference with first non-orthologous sequence - C.immitis:259 P.ramorum:253

J3K1N8              	100.00%		H3GIT1              	100.00%
Bootstrap support for J3K1N8 as seed ortholog is 100%.
Bootstrap support for H3GIT1 as seed ortholog is 100%.

Group of orthologs #482. Best score 358 bits
Score difference with first non-orthologous sequence - C.immitis:165 P.ramorum:182

J3K1V0              	100.00%		H3G4X2              	100.00%
Bootstrap support for J3K1V0 as seed ortholog is 99%.
Bootstrap support for H3G4X2 as seed ortholog is 99%.

Group of orthologs #483. Best score 357 bits
Score difference with first non-orthologous sequence - C.immitis:283 P.ramorum:294

J3KLX3              	100.00%		H3GAH8              	100.00%
                    	       		H3H0V9              	14.57%
Bootstrap support for J3KLX3 as seed ortholog is 100%.
Bootstrap support for H3GAH8 as seed ortholog is 100%.

Group of orthologs #484. Best score 357 bits
Score difference with first non-orthologous sequence - C.immitis:357 P.ramorum:266

J3KH72              	100.00%		H3GAS1              	100.00%
Bootstrap support for J3KH72 as seed ortholog is 100%.
Bootstrap support for H3GAS1 as seed ortholog is 100%.

Group of orthologs #485. Best score 356 bits
Score difference with first non-orthologous sequence - C.immitis:2 P.ramorum:64

J3K2N2              	100.00%		H3G8Q7              	100.00%
J3KEK2              	36.43%		
Bootstrap support for J3K2N2 as seed ortholog is 54%.
Alternative seed ortholog is J3KIS1 (2 bits away from this cluster)
Bootstrap support for H3G8Q7 as seed ortholog is 97%.

Group of orthologs #486. Best score 356 bits
Score difference with first non-orthologous sequence - C.immitis:356 P.ramorum:356

J3K2N0              	100.00%		H3GYB8              	100.00%
Bootstrap support for J3K2N0 as seed ortholog is 100%.
Bootstrap support for H3GYB8 as seed ortholog is 100%.

Group of orthologs #487. Best score 354 bits
Score difference with first non-orthologous sequence - C.immitis:354 P.ramorum:354

J3KC33              	100.00%		H3G836              	100.00%
Bootstrap support for J3KC33 as seed ortholog is 100%.
Bootstrap support for H3G836 as seed ortholog is 100%.

Group of orthologs #488. Best score 354 bits
Score difference with first non-orthologous sequence - C.immitis:354 P.ramorum:354

J3KIY7              	100.00%		H3G570              	100.00%
Bootstrap support for J3KIY7 as seed ortholog is 100%.
Bootstrap support for H3G570 as seed ortholog is 100%.

Group of orthologs #489. Best score 354 bits
Score difference with first non-orthologous sequence - C.immitis:56 P.ramorum:109

J3KEY5              	100.00%		H3GA03              	100.00%
Bootstrap support for J3KEY5 as seed ortholog is 94%.
Bootstrap support for H3GA03 as seed ortholog is 98%.

Group of orthologs #490. Best score 352 bits
Score difference with first non-orthologous sequence - C.immitis:212 P.ramorum:188

Q1EB85              	100.00%		H3G791              	100.00%
Bootstrap support for Q1EB85 as seed ortholog is 100%.
Bootstrap support for H3G791 as seed ortholog is 100%.

Group of orthologs #491. Best score 352 bits
Score difference with first non-orthologous sequence - C.immitis:352 P.ramorum:352

J3KB31              	100.00%		H3GQQ7              	100.00%
Bootstrap support for J3KB31 as seed ortholog is 100%.
Bootstrap support for H3GQQ7 as seed ortholog is 100%.

Group of orthologs #492. Best score 351 bits
Score difference with first non-orthologous sequence - C.immitis:279 P.ramorum:351

I9NQ56              	100.00%		H3G973              	100.00%
Bootstrap support for I9NQ56 as seed ortholog is 100%.
Bootstrap support for H3G973 as seed ortholog is 100%.

Group of orthologs #493. Best score 351 bits
Score difference with first non-orthologous sequence - C.immitis:351 P.ramorum:351

J3K9A8              	100.00%		H3GSX4              	100.00%
Bootstrap support for J3K9A8 as seed ortholog is 100%.
Bootstrap support for H3GSX4 as seed ortholog is 100%.

Group of orthologs #494. Best score 351 bits
Score difference with first non-orthologous sequence - C.immitis:351 P.ramorum:351

J3K7V4              	100.00%		H3HDR1              	100.00%
Bootstrap support for J3K7V4 as seed ortholog is 100%.
Bootstrap support for H3HDR1 as seed ortholog is 100%.

Group of orthologs #495. Best score 350 bits
Score difference with first non-orthologous sequence - C.immitis:350 P.ramorum:350

J3KFT1              	100.00%		H3GWS1              	100.00%
Bootstrap support for J3KFT1 as seed ortholog is 100%.
Bootstrap support for H3GWS1 as seed ortholog is 100%.

Group of orthologs #496. Best score 350 bits
Score difference with first non-orthologous sequence - C.immitis:350 P.ramorum:350

J3K019              	100.00%		H3HCN8              	100.00%
Bootstrap support for J3K019 as seed ortholog is 100%.
Bootstrap support for H3HCN8 as seed ortholog is 100%.

Group of orthologs #497. Best score 349 bits
Score difference with first non-orthologous sequence - C.immitis:349 P.ramorum:349

J3KGY0              	100.00%		H3GCH7              	100.00%
J3K4N1              	20.39%		H3G888              	69.24%
                    	       		H3GCH8              	31.91%
Bootstrap support for J3KGY0 as seed ortholog is 100%.
Bootstrap support for H3GCH7 as seed ortholog is 100%.

Group of orthologs #498. Best score 349 bits
Score difference with first non-orthologous sequence - C.immitis:349 P.ramorum:349

J3K7M9              	100.00%		H3G882              	100.00%
Bootstrap support for J3K7M9 as seed ortholog is 100%.
Bootstrap support for H3G882 as seed ortholog is 100%.

Group of orthologs #499. Best score 349 bits
Score difference with first non-orthologous sequence - C.immitis:349 P.ramorum:349

J3K9D0              	100.00%		H3G883              	100.00%
Bootstrap support for J3K9D0 as seed ortholog is 100%.
Bootstrap support for H3G883 as seed ortholog is 100%.

Group of orthologs #500. Best score 349 bits
Score difference with first non-orthologous sequence - C.immitis:273 P.ramorum:149

J3KGI0              	100.00%		H3G950              	100.00%
Bootstrap support for J3KGI0 as seed ortholog is 100%.
Bootstrap support for H3G950 as seed ortholog is 99%.

Group of orthologs #501. Best score 349 bits
Score difference with first non-orthologous sequence - C.immitis:132 P.ramorum:292

J3K5L4              	100.00%		H3GUR3              	100.00%
Bootstrap support for J3K5L4 as seed ortholog is 99%.
Bootstrap support for H3GUR3 as seed ortholog is 100%.

Group of orthologs #502. Best score 348 bits
Score difference with first non-orthologous sequence - C.immitis:348 P.ramorum:348

J3KL17              	100.00%		H3G6Y6              	100.00%
Bootstrap support for J3KL17 as seed ortholog is 100%.
Bootstrap support for H3G6Y6 as seed ortholog is 100%.

Group of orthologs #503. Best score 347 bits
Score difference with first non-orthologous sequence - C.immitis:42 P.ramorum:292

J3K6J5              	100.00%		H3GAF9              	100.00%
Bootstrap support for J3K6J5 as seed ortholog is 87%.
Bootstrap support for H3GAF9 as seed ortholog is 100%.

Group of orthologs #504. Best score 346 bits
Score difference with first non-orthologous sequence - C.immitis:69 P.ramorum:46

J3K531              	100.00%		H3G9W4              	100.00%
                    	       		H3HDS7              	8.36%
Bootstrap support for J3K531 as seed ortholog is 97%.
Bootstrap support for H3G9W4 as seed ortholog is 88%.

Group of orthologs #505. Best score 346 bits
Score difference with first non-orthologous sequence - C.immitis:346 P.ramorum:346

I9NQ24              	100.00%		H3G9H9              	100.00%
Bootstrap support for I9NQ24 as seed ortholog is 100%.
Bootstrap support for H3G9H9 as seed ortholog is 100%.

Group of orthologs #506. Best score 345 bits
Score difference with first non-orthologous sequence - C.immitis:345 P.ramorum:345

J3K6P1              	100.00%		H3G9E8              	100.00%
Bootstrap support for J3K6P1 as seed ortholog is 100%.
Bootstrap support for H3G9E8 as seed ortholog is 100%.

Group of orthologs #507. Best score 345 bits
Score difference with first non-orthologous sequence - C.immitis:345 P.ramorum:345

J3KBB1              	100.00%		H3GAV2              	100.00%
Bootstrap support for J3KBB1 as seed ortholog is 100%.
Bootstrap support for H3GAV2 as seed ortholog is 100%.

Group of orthologs #508. Best score 345 bits
Score difference with first non-orthologous sequence - C.immitis:345 P.ramorum:345

J3KJW7              	100.00%		H3G857              	100.00%
Bootstrap support for J3KJW7 as seed ortholog is 100%.
Bootstrap support for H3G857 as seed ortholog is 100%.

Group of orthologs #509. Best score 344 bits
Score difference with first non-orthologous sequence - C.immitis:344 P.ramorum:344

J3K4S2              	100.00%		H3G6G3              	100.00%
                    	       		H3G7P1              	10.25%
Bootstrap support for J3K4S2 as seed ortholog is 100%.
Bootstrap support for H3G6G3 as seed ortholog is 100%.

Group of orthologs #510. Best score 344 bits
Score difference with first non-orthologous sequence - C.immitis:169 P.ramorum:344

J3K1C8              	100.00%		H3G7H2              	100.00%
Bootstrap support for J3K1C8 as seed ortholog is 99%.
Bootstrap support for H3G7H2 as seed ortholog is 100%.

Group of orthologs #511. Best score 344 bits
Score difference with first non-orthologous sequence - C.immitis:344 P.ramorum:344

J3KIS7              	100.00%		H3G856              	100.00%
Bootstrap support for J3KIS7 as seed ortholog is 100%.
Bootstrap support for H3G856 as seed ortholog is 100%.

Group of orthologs #512. Best score 344 bits
Score difference with first non-orthologous sequence - C.immitis:344 P.ramorum:344

I9XKE9              	100.00%		H3H283              	100.00%
Bootstrap support for I9XKE9 as seed ortholog is 100%.
Bootstrap support for H3H283 as seed ortholog is 100%.

Group of orthologs #513. Best score 344 bits
Score difference with first non-orthologous sequence - C.immitis:344 P.ramorum:344

J3KKZ6              	100.00%		H3H563              	100.00%
Bootstrap support for J3KKZ6 as seed ortholog is 100%.
Bootstrap support for H3H563 as seed ortholog is 100%.

Group of orthologs #514. Best score 342 bits
Score difference with first non-orthologous sequence - C.immitis:342 P.ramorum:342

J3K694              	100.00%		H3GVL3              	100.00%
                    	       		H3GP70              	9.90%
Bootstrap support for J3K694 as seed ortholog is 100%.
Bootstrap support for H3GVL3 as seed ortholog is 100%.

Group of orthologs #515. Best score 341 bits
Score difference with first non-orthologous sequence - C.immitis:251 P.ramorum:230

I9XM29              	100.00%		H3G7J3              	100.00%
Bootstrap support for I9XM29 as seed ortholog is 100%.
Bootstrap support for H3G7J3 as seed ortholog is 100%.

Group of orthologs #516. Best score 340 bits
Score difference with first non-orthologous sequence - C.immitis:165 P.ramorum:99

I9NPH5              	100.00%		H3GAB6              	100.00%
Bootstrap support for I9NPH5 as seed ortholog is 100%.
Bootstrap support for H3GAB6 as seed ortholog is 99%.

Group of orthologs #517. Best score 340 bits
Score difference with first non-orthologous sequence - C.immitis:340 P.ramorum:340

J3K867              	100.00%		H3G8Q6              	100.00%
Bootstrap support for J3K867 as seed ortholog is 100%.
Bootstrap support for H3G8Q6 as seed ortholog is 100%.

Group of orthologs #518. Best score 340 bits
Score difference with first non-orthologous sequence - C.immitis:283 P.ramorum:340

J3KL97              	100.00%		H3G9T5              	100.00%
Bootstrap support for J3KL97 as seed ortholog is 100%.
Bootstrap support for H3G9T5 as seed ortholog is 100%.

Group of orthologs #519. Best score 340 bits
Score difference with first non-orthologous sequence - C.immitis:340 P.ramorum:340

I9NSG7              	100.00%		H3H2G5              	100.00%
Bootstrap support for I9NSG7 as seed ortholog is 100%.
Bootstrap support for H3H2G5 as seed ortholog is 100%.

Group of orthologs #520. Best score 340 bits
Score difference with first non-orthologous sequence - C.immitis:340 P.ramorum:216

J3KI13              	100.00%		H3GU25              	100.00%
Bootstrap support for J3KI13 as seed ortholog is 100%.
Bootstrap support for H3GU25 as seed ortholog is 100%.

Group of orthologs #521. Best score 339 bits
Score difference with first non-orthologous sequence - C.immitis:339 P.ramorum:339

J3K1P0              	100.00%		H3GCB7              	100.00%
Bootstrap support for J3K1P0 as seed ortholog is 100%.
Bootstrap support for H3GCB7 as seed ortholog is 100%.

Group of orthologs #522. Best score 339 bits
Score difference with first non-orthologous sequence - C.immitis:339 P.ramorum:153

Q1E8M9              	100.00%		H3HCI0              	100.00%
Bootstrap support for Q1E8M9 as seed ortholog is 100%.
Bootstrap support for H3HCI0 as seed ortholog is 99%.

Group of orthologs #523. Best score 338 bits
Score difference with first non-orthologous sequence - C.immitis:338 P.ramorum:338

Q1E2F4              	100.00%		H3G6D2              	100.00%
Bootstrap support for Q1E2F4 as seed ortholog is 100%.
Bootstrap support for H3G6D2 as seed ortholog is 100%.

Group of orthologs #524. Best score 338 bits
Score difference with first non-orthologous sequence - C.immitis:338 P.ramorum:338

J3KGS5              	100.00%		H3GTK3              	100.00%
Bootstrap support for J3KGS5 as seed ortholog is 100%.
Bootstrap support for H3GTK3 as seed ortholog is 100%.

Group of orthologs #525. Best score 337 bits
Score difference with first non-orthologous sequence - C.immitis:337 P.ramorum:271

J3K9Z2              	100.00%		H3GCZ5              	100.00%
J3KID0              	22.00%		H3GCZ6              	77.04%
                    	       		H3GCZ7              	63.26%
                    	       		H3GCY7              	61.93%
                    	       		H3G6M1              	59.70%
Bootstrap support for J3K9Z2 as seed ortholog is 100%.
Bootstrap support for H3GCZ5 as seed ortholog is 100%.

Group of orthologs #526. Best score 337 bits
Score difference with first non-orthologous sequence - C.immitis:337 P.ramorum:337

J3KLX8              	100.00%		H3GIT6              	100.00%
                    	       		H3GIT7              	48.33%
Bootstrap support for J3KLX8 as seed ortholog is 100%.
Bootstrap support for H3GIT6 as seed ortholog is 100%.

Group of orthologs #527. Best score 337 bits
Score difference with first non-orthologous sequence - C.immitis:128 P.ramorum:337

Q1EAU8              	100.00%		H3GAM5              	100.00%
Bootstrap support for Q1EAU8 as seed ortholog is 99%.
Bootstrap support for H3GAM5 as seed ortholog is 100%.

Group of orthologs #528. Best score 337 bits
Score difference with first non-orthologous sequence - C.immitis:337 P.ramorum:337

J3K8S2              	100.00%		H3GTC8              	100.00%
Bootstrap support for J3K8S2 as seed ortholog is 100%.
Bootstrap support for H3GTC8 as seed ortholog is 100%.

Group of orthologs #529. Best score 337 bits
Score difference with first non-orthologous sequence - C.immitis:337 P.ramorum:337

J3KFP3              	100.00%		H3GWA8              	100.00%
Bootstrap support for J3KFP3 as seed ortholog is 100%.
Bootstrap support for H3GWA8 as seed ortholog is 100%.

Group of orthologs #530. Best score 336 bits
Score difference with first non-orthologous sequence - C.immitis:172 P.ramorum:195

Q1E1R7              	100.00%		H3G5E4              	100.00%
                    	       		H3G6J2              	100.00%
Bootstrap support for Q1E1R7 as seed ortholog is 99%.
Bootstrap support for H3G5E4 as seed ortholog is 99%.
Bootstrap support for H3G6J2 as seed ortholog is 99%.

Group of orthologs #531. Best score 336 bits
Score difference with first non-orthologous sequence - C.immitis:336 P.ramorum:336

J3KAP7              	100.00%		H3G5Q1              	100.00%
Bootstrap support for J3KAP7 as seed ortholog is 100%.
Bootstrap support for H3G5Q1 as seed ortholog is 100%.

Group of orthologs #532. Best score 336 bits
Score difference with first non-orthologous sequence - C.immitis:336 P.ramorum:336

J3KG82              	100.00%		H3GA62              	100.00%
Bootstrap support for J3KG82 as seed ortholog is 100%.
Bootstrap support for H3GA62 as seed ortholog is 100%.

Group of orthologs #533. Best score 336 bits
Score difference with first non-orthologous sequence - C.immitis:336 P.ramorum:336

Q1E170              	100.00%		H3G7Y3              	100.00%
Bootstrap support for Q1E170 as seed ortholog is 100%.
Bootstrap support for H3G7Y3 as seed ortholog is 100%.

Group of orthologs #534. Best score 336 bits
Score difference with first non-orthologous sequence - C.immitis:336 P.ramorum:336

Q1DHH9              	100.00%		H3H1J9              	100.00%
Bootstrap support for Q1DHH9 as seed ortholog is 100%.
Bootstrap support for H3H1J9 as seed ortholog is 100%.

Group of orthologs #535. Best score 334 bits
Score difference with first non-orthologous sequence - C.immitis:334 P.ramorum:334

I9NM18              	100.00%		H3G9X1              	100.00%
Bootstrap support for I9NM18 as seed ortholog is 100%.
Bootstrap support for H3G9X1 as seed ortholog is 100%.

Group of orthologs #536. Best score 334 bits
Score difference with first non-orthologous sequence - C.immitis:334 P.ramorum:334

J3KBU7              	100.00%		H3G7P3              	100.00%
Bootstrap support for J3KBU7 as seed ortholog is 100%.
Bootstrap support for H3G7P3 as seed ortholog is 100%.

Group of orthologs #537. Best score 334 bits
Score difference with first non-orthologous sequence - C.immitis:334 P.ramorum:334

Q1DI97              	100.00%		H3HC45              	100.00%
Bootstrap support for Q1DI97 as seed ortholog is 100%.
Bootstrap support for H3HC45 as seed ortholog is 100%.

Group of orthologs #538. Best score 333 bits
Score difference with first non-orthologous sequence - C.immitis:333 P.ramorum:333

J3KH55              	100.00%		H3G9X4              	100.00%
Bootstrap support for J3KH55 as seed ortholog is 100%.
Bootstrap support for H3G9X4 as seed ortholog is 100%.

Group of orthologs #539. Best score 332 bits
Score difference with first non-orthologous sequence - C.immitis:332 P.ramorum:332

J3KCX9              	100.00%		H3G8H2              	100.00%
                    	       		H3GIL6              	74.06%
Bootstrap support for J3KCX9 as seed ortholog is 100%.
Bootstrap support for H3G8H2 as seed ortholog is 100%.

Group of orthologs #540. Best score 332 bits
Score difference with first non-orthologous sequence - C.immitis:332 P.ramorum:332

J3K452              	100.00%		H3GW52              	100.00%
                    	       		H3H562              	6.07%
Bootstrap support for J3K452 as seed ortholog is 100%.
Bootstrap support for H3GW52 as seed ortholog is 100%.

Group of orthologs #541. Best score 332 bits
Score difference with first non-orthologous sequence - C.immitis:332 P.ramorum:332

J3K2F1              	100.00%		H3GAH7              	100.00%
Bootstrap support for J3K2F1 as seed ortholog is 100%.
Bootstrap support for H3GAH7 as seed ortholog is 100%.

Group of orthologs #542. Best score 332 bits
Score difference with first non-orthologous sequence - C.immitis:251 P.ramorum:232

J3K3P9              	100.00%		H3GM71              	100.00%
Bootstrap support for J3K3P9 as seed ortholog is 99%.
Bootstrap support for H3GM71 as seed ortholog is 99%.

Group of orthologs #543. Best score 332 bits
Score difference with first non-orthologous sequence - C.immitis:332 P.ramorum:332

J3KJH3              	100.00%		H3GBK8              	100.00%
Bootstrap support for J3KJH3 as seed ortholog is 100%.
Bootstrap support for H3GBK8 as seed ortholog is 100%.

Group of orthologs #544. Best score 332 bits
Score difference with first non-orthologous sequence - C.immitis:332 P.ramorum:332

J3K0C9              	100.00%		H3H0W7              	100.00%
Bootstrap support for J3K0C9 as seed ortholog is 100%.
Bootstrap support for H3H0W7 as seed ortholog is 100%.

Group of orthologs #545. Best score 332 bits
Score difference with first non-orthologous sequence - C.immitis:332 P.ramorum:332

J3KK63              	100.00%		H3GR83              	100.00%
Bootstrap support for J3KK63 as seed ortholog is 100%.
Bootstrap support for H3GR83 as seed ortholog is 100%.

Group of orthologs #546. Best score 331 bits
Score difference with first non-orthologous sequence - C.immitis:331 P.ramorum:331

J0HE59              	100.00%		H3GFQ5              	100.00%
Bootstrap support for J0HE59 as seed ortholog is 100%.
Bootstrap support for H3GFQ5 as seed ortholog is 100%.

Group of orthologs #547. Best score 331 bits
Score difference with first non-orthologous sequence - C.immitis:116 P.ramorum:331

J3K7P2              	100.00%		H3GDU3              	100.00%
Bootstrap support for J3K7P2 as seed ortholog is 98%.
Bootstrap support for H3GDU3 as seed ortholog is 100%.

Group of orthologs #548. Best score 331 bits
Score difference with first non-orthologous sequence - C.immitis:331 P.ramorum:331

J3KHR4              	100.00%		H3H1H3              	100.00%
Bootstrap support for J3KHR4 as seed ortholog is 100%.
Bootstrap support for H3H1H3 as seed ortholog is 100%.

Group of orthologs #549. Best score 330 bits
Score difference with first non-orthologous sequence - C.immitis:330 P.ramorum:330

J3KFH6              	100.00%		H3G565              	100.00%
Bootstrap support for J3KFH6 as seed ortholog is 100%.
Bootstrap support for H3G565 as seed ortholog is 100%.

Group of orthologs #550. Best score 330 bits
Score difference with first non-orthologous sequence - C.immitis:330 P.ramorum:330

J3KFP1              	100.00%		H3GAJ2              	100.00%
Bootstrap support for J3KFP1 as seed ortholog is 100%.
Bootstrap support for H3GAJ2 as seed ortholog is 100%.

Group of orthologs #551. Best score 329 bits
Score difference with first non-orthologous sequence - C.immitis:329 P.ramorum:329

J3KE53              	100.00%		H3GAR2              	100.00%
Bootstrap support for J3KE53 as seed ortholog is 100%.
Bootstrap support for H3GAR2 as seed ortholog is 100%.

Group of orthologs #552. Best score 329 bits
Score difference with first non-orthologous sequence - C.immitis:124 P.ramorum:74

J3KGN1              	100.00%		H3GIZ0              	100.00%
Bootstrap support for J3KGN1 as seed ortholog is 99%.
Bootstrap support for H3GIZ0 as seed ortholog is 97%.

Group of orthologs #553. Best score 328 bits
Score difference with first non-orthologous sequence - C.immitis:328 P.ramorum:328

J3K764              	100.00%		H3G7S9              	100.00%
Bootstrap support for J3K764 as seed ortholog is 100%.
Bootstrap support for H3G7S9 as seed ortholog is 100%.

Group of orthologs #554. Best score 328 bits
Score difference with first non-orthologous sequence - C.immitis:328 P.ramorum:328

J3KIM8              	100.00%		H3GZ80              	100.00%
Bootstrap support for J3KIM8 as seed ortholog is 100%.
Bootstrap support for H3GZ80 as seed ortholog is 100%.

Group of orthologs #555. Best score 327 bits
Score difference with first non-orthologous sequence - C.immitis:96 P.ramorum:92

I9NRZ2              	100.00%		H3GKU6              	100.00%
Bootstrap support for I9NRZ2 as seed ortholog is 99%.
Bootstrap support for H3GKU6 as seed ortholog is 98%.

Group of orthologs #556. Best score 326 bits
Score difference with first non-orthologous sequence - C.immitis:93 P.ramorum:122

J3KJU5              	100.00%		H3H7S1              	100.00%
                    	       		H3H546              	38.04%
Bootstrap support for J3KJU5 as seed ortholog is 98%.
Bootstrap support for H3H7S1 as seed ortholog is 99%.

Group of orthologs #557. Best score 326 bits
Score difference with first non-orthologous sequence - C.immitis:326 P.ramorum:326

J3K4X0              	100.00%		H3G6R7              	100.00%
Bootstrap support for J3K4X0 as seed ortholog is 100%.
Bootstrap support for H3G6R7 as seed ortholog is 100%.

Group of orthologs #558. Best score 326 bits
Score difference with first non-orthologous sequence - C.immitis:326 P.ramorum:326

J3KFR6              	100.00%		H3HBC2              	100.00%
Bootstrap support for J3KFR6 as seed ortholog is 100%.
Bootstrap support for H3HBC2 as seed ortholog is 100%.

Group of orthologs #559. Best score 325 bits
Score difference with first non-orthologous sequence - C.immitis:325 P.ramorum:325

J3KKW7              	100.00%		H3H2B1              	100.00%
                    	       		H3GYW9              	8.47%
                    	       		H3GM47              	6.91%
                    	       		H3GDY3              	5.21%
Bootstrap support for J3KKW7 as seed ortholog is 100%.
Bootstrap support for H3H2B1 as seed ortholog is 100%.

Group of orthologs #560. Best score 325 bits
Score difference with first non-orthologous sequence - C.immitis:182 P.ramorum:325

J3K659              	100.00%		H3G7N7              	100.00%
Bootstrap support for J3K659 as seed ortholog is 99%.
Bootstrap support for H3G7N7 as seed ortholog is 100%.

Group of orthologs #561. Best score 325 bits
Score difference with first non-orthologous sequence - C.immitis:325 P.ramorum:250

J3KEM0              	100.00%		H3GJC5              	100.00%
Bootstrap support for J3KEM0 as seed ortholog is 100%.
Bootstrap support for H3GJC5 as seed ortholog is 100%.

Group of orthologs #562. Best score 325 bits
Score difference with first non-orthologous sequence - C.immitis:325 P.ramorum:201

J3KK79              	100.00%		H3GT37              	100.00%
Bootstrap support for J3KK79 as seed ortholog is 100%.
Bootstrap support for H3GT37 as seed ortholog is 100%.

Group of orthologs #563. Best score 324 bits
Score difference with first non-orthologous sequence - C.immitis:324 P.ramorum:324

J3K968              	100.00%		H3GU31              	100.00%
Bootstrap support for J3K968 as seed ortholog is 100%.
Bootstrap support for H3GU31 as seed ortholog is 100%.

Group of orthologs #564. Best score 323 bits
Score difference with first non-orthologous sequence - C.immitis:323 P.ramorum:323

J3K6R2              	100.00%		H3GLH5              	100.00%
Bootstrap support for J3K6R2 as seed ortholog is 100%.
Bootstrap support for H3GLH5 as seed ortholog is 100%.

Group of orthologs #565. Best score 322 bits
Score difference with first non-orthologous sequence - C.immitis:322 P.ramorum:322

I9NTL3              	100.00%		H3GCB9              	100.00%
Bootstrap support for I9NTL3 as seed ortholog is 100%.
Bootstrap support for H3GCB9 as seed ortholog is 100%.

Group of orthologs #566. Best score 322 bits
Score difference with first non-orthologous sequence - C.immitis:263 P.ramorum:195

J3KK18              	100.00%		H3H2U3              	100.00%
Bootstrap support for J3KK18 as seed ortholog is 100%.
Bootstrap support for H3H2U3 as seed ortholog is 100%.

Group of orthologs #567. Best score 321 bits
Score difference with first non-orthologous sequence - C.immitis:321 P.ramorum:239

J3K3G1              	100.00%		H3GDW1              	100.00%
Bootstrap support for J3K3G1 as seed ortholog is 100%.
Bootstrap support for H3GDW1 as seed ortholog is 100%.

Group of orthologs #568. Best score 321 bits
Score difference with first non-orthologous sequence - C.immitis:321 P.ramorum:321

J3KFK4              	100.00%		H3GA48              	100.00%
Bootstrap support for J3KFK4 as seed ortholog is 100%.
Bootstrap support for H3GA48 as seed ortholog is 100%.

Group of orthologs #569. Best score 321 bits
Score difference with first non-orthologous sequence - C.immitis:321 P.ramorum:321

Q1DQ27              	100.00%		H3G9L7              	100.00%
Bootstrap support for Q1DQ27 as seed ortholog is 100%.
Bootstrap support for H3G9L7 as seed ortholog is 100%.

Group of orthologs #570. Best score 321 bits
Score difference with first non-orthologous sequence - C.immitis:321 P.ramorum:321

J3KK03              	100.00%		H3H197              	100.00%
Bootstrap support for J3KK03 as seed ortholog is 100%.
Bootstrap support for H3H197 as seed ortholog is 100%.

Group of orthologs #571. Best score 320 bits
Score difference with first non-orthologous sequence - C.immitis:320 P.ramorum:258

J0HHA3              	100.00%		H3G9S5              	100.00%
Bootstrap support for J0HHA3 as seed ortholog is 100%.
Bootstrap support for H3G9S5 as seed ortholog is 100%.

Group of orthologs #572. Best score 320 bits
Score difference with first non-orthologous sequence - C.immitis:320 P.ramorum:23

J3KCR5              	100.00%		H3G7G1              	100.00%
Bootstrap support for J3KCR5 as seed ortholog is 100%.
Bootstrap support for H3G7G1 as seed ortholog is 62%.
Alternative seed ortholog is H3GIQ1 (23 bits away from this cluster)

Group of orthologs #573. Best score 319 bits
Score difference with first non-orthologous sequence - C.immitis:145 P.ramorum:319

J3KKK7              	100.00%		H3HDW5              	100.00%
                    	       		H3G8N3              	14.76%
Bootstrap support for J3KKK7 as seed ortholog is 99%.
Bootstrap support for H3HDW5 as seed ortholog is 100%.

Group of orthologs #574. Best score 319 bits
Score difference with first non-orthologous sequence - C.immitis:319 P.ramorum:319

J3K091              	100.00%		H3G7F3              	100.00%
Bootstrap support for J3K091 as seed ortholog is 100%.
Bootstrap support for H3G7F3 as seed ortholog is 100%.

Group of orthologs #575. Best score 319 bits
Score difference with first non-orthologous sequence - C.immitis:319 P.ramorum:319

J3KDB9              	100.00%		H3GBX6              	100.00%
Bootstrap support for J3KDB9 as seed ortholog is 100%.
Bootstrap support for H3GBX6 as seed ortholog is 100%.

Group of orthologs #576. Best score 319 bits
Score difference with first non-orthologous sequence - C.immitis:99 P.ramorum:208

J3KL42              	100.00%		H3HD43              	100.00%
Bootstrap support for J3KL42 as seed ortholog is 97%.
Bootstrap support for H3HD43 as seed ortholog is 99%.

Group of orthologs #577. Best score 318 bits
Score difference with first non-orthologous sequence - C.immitis:105 P.ramorum:138

J3KAC4              	100.00%		H3GL37              	100.00%
J3K134              	27.55%		H3GL38              	68.58%
                    	       		H3GL36              	26.54%
                    	       		H3GL33              	24.86%
                    	       		H3GL34              	17.60%
                    	       		H3G907              	5.45%
Bootstrap support for J3KAC4 as seed ortholog is 98%.
Bootstrap support for H3GL37 as seed ortholog is 99%.

Group of orthologs #578. Best score 317 bits
Score difference with first non-orthologous sequence - C.immitis:317 P.ramorum:317

J0HE18              	100.00%		H3G7E6              	100.00%
Bootstrap support for J0HE18 as seed ortholog is 100%.
Bootstrap support for H3G7E6 as seed ortholog is 100%.

Group of orthologs #579. Best score 317 bits
Score difference with first non-orthologous sequence - C.immitis:242 P.ramorum:317

J3KL11              	100.00%		H3G9I5              	100.00%
Bootstrap support for J3KL11 as seed ortholog is 100%.
Bootstrap support for H3G9I5 as seed ortholog is 100%.

Group of orthologs #580. Best score 317 bits
Score difference with first non-orthologous sequence - C.immitis:317 P.ramorum:317

J3KD49              	100.00%		H3HD31              	100.00%
Bootstrap support for J3KD49 as seed ortholog is 100%.
Bootstrap support for H3HD31 as seed ortholog is 100%.

Group of orthologs #581. Best score 316 bits
Score difference with first non-orthologous sequence - C.immitis:242 P.ramorum:316

J0HDW5              	100.00%		H3G8R6              	100.00%
Bootstrap support for J0HDW5 as seed ortholog is 100%.
Bootstrap support for H3G8R6 as seed ortholog is 100%.

Group of orthologs #582. Best score 316 bits
Score difference with first non-orthologous sequence - C.immitis:198 P.ramorum:62

J3K8F5              	100.00%		H3G8X5              	100.00%
Bootstrap support for J3K8F5 as seed ortholog is 100%.
Bootstrap support for H3G8X5 as seed ortholog is 99%.

Group of orthologs #583. Best score 316 bits
Score difference with first non-orthologous sequence - C.immitis:316 P.ramorum:316

I9NPC1              	100.00%		H3GVK0              	100.00%
Bootstrap support for I9NPC1 as seed ortholog is 100%.
Bootstrap support for H3GVK0 as seed ortholog is 100%.

Group of orthologs #584. Best score 316 bits
Score difference with first non-orthologous sequence - C.immitis:316 P.ramorum:316

J3KLS7              	100.00%		H3G8Y4              	100.00%
Bootstrap support for J3KLS7 as seed ortholog is 100%.
Bootstrap support for H3G8Y4 as seed ortholog is 100%.

Group of orthologs #585. Best score 315 bits
Score difference with first non-orthologous sequence - C.immitis:240 P.ramorum:315

J3K5A7              	100.00%		H3GAH0              	100.00%
J3K074              	8.37%		
Bootstrap support for J3K5A7 as seed ortholog is 100%.
Bootstrap support for H3GAH0 as seed ortholog is 100%.

Group of orthologs #586. Best score 315 bits
Score difference with first non-orthologous sequence - C.immitis:315 P.ramorum:195

J3K484              	100.00%		H3HCD9              	100.00%
Bootstrap support for J3K484 as seed ortholog is 100%.
Bootstrap support for H3HCD9 as seed ortholog is 100%.

Group of orthologs #587. Best score 314 bits
Score difference with first non-orthologous sequence - C.immitis:13 P.ramorum:22

J0HGQ5              	100.00%		H3G992              	100.00%
Bootstrap support for J0HGQ5 as seed ortholog is 65%.
Alternative seed ortholog is J0HF44 (13 bits away from this cluster)
Bootstrap support for H3G992 as seed ortholog is 74%.
Alternative seed ortholog is H3G8L5 (22 bits away from this cluster)

Group of orthologs #588. Best score 314 bits
Score difference with first non-orthologous sequence - C.immitis:121 P.ramorum:56

J3K9H4              	100.00%		H3G9H8              	100.00%
Bootstrap support for J3K9H4 as seed ortholog is 99%.
Bootstrap support for H3G9H8 as seed ortholog is 92%.

Group of orthologs #589. Best score 313 bits
Score difference with first non-orthologous sequence - C.immitis:313 P.ramorum:313

J3K5I5              	100.00%		H3G949              	100.00%
Bootstrap support for J3K5I5 as seed ortholog is 100%.
Bootstrap support for H3G949 as seed ortholog is 100%.

Group of orthologs #590. Best score 312 bits
Score difference with first non-orthologous sequence - C.immitis:163 P.ramorum:126

J3KFM0              	100.00%		H3H5P9              	100.00%
                    	       		H3H820              	32.19%
Bootstrap support for J3KFM0 as seed ortholog is 99%.
Bootstrap support for H3H5P9 as seed ortholog is 99%.

Group of orthologs #591. Best score 311 bits
Score difference with first non-orthologous sequence - C.immitis:311 P.ramorum:118

J3KF68              	100.00%		H3GVJ9              	100.00%
                    	       		H3GVJ0              	67.83%
                    	       		H3H1N5              	46.54%
                    	       		H3GVI1              	42.27%
                    	       		H3GVI2              	37.86%
                    	       		H3H5N6              	20.71%
                    	       		H3GFM9              	20.71%
                    	       		H3GFM6              	20.65%
                    	       		H3GFK3              	18.90%
                    	       		H3GHA9              	9.19%
Bootstrap support for J3KF68 as seed ortholog is 100%.
Bootstrap support for H3GVJ9 as seed ortholog is 98%.

Group of orthologs #592. Best score 311 bits
Score difference with first non-orthologous sequence - C.immitis:243 P.ramorum:311

J3K3K4              	100.00%		H3G7H3              	100.00%
Bootstrap support for J3K3K4 as seed ortholog is 100%.
Bootstrap support for H3G7H3 as seed ortholog is 100%.

Group of orthologs #593. Best score 311 bits
Score difference with first non-orthologous sequence - C.immitis:311 P.ramorum:311

J3KHR8              	100.00%		H3GH31              	100.00%
Bootstrap support for J3KHR8 as seed ortholog is 100%.
Bootstrap support for H3GH31 as seed ortholog is 100%.

Group of orthologs #594. Best score 310 bits
Score difference with first non-orthologous sequence - C.immitis:310 P.ramorum:310

J3K4N2              	100.00%		H3HBV3              	100.00%
Bootstrap support for J3K4N2 as seed ortholog is 100%.
Bootstrap support for H3HBV3 as seed ortholog is 100%.

Group of orthologs #595. Best score 309 bits
Score difference with first non-orthologous sequence - C.immitis:69 P.ramorum:229

J3K492              	100.00%		H3GDZ7              	100.00%
                    	       		H3GPF0              	47.14%
                    	       		H3G604              	22.99%
                    	       		H3G605              	21.95%
                    	       		H3G5B9              	9.22%
                    	       		H3G606              	5.71%
Bootstrap support for J3K492 as seed ortholog is 94%.
Bootstrap support for H3GDZ7 as seed ortholog is 100%.

Group of orthologs #596. Best score 309 bits
Score difference with first non-orthologous sequence - C.immitis:309 P.ramorum:309

Q1DTL7              	100.00%		H3G898              	100.00%
Bootstrap support for Q1DTL7 as seed ortholog is 100%.
Bootstrap support for H3G898 as seed ortholog is 100%.

Group of orthologs #597. Best score 308 bits
Score difference with first non-orthologous sequence - C.immitis:308 P.ramorum:308

J3KGY4              	100.00%		H3G9I3              	100.00%
Bootstrap support for J3KGY4 as seed ortholog is 100%.
Bootstrap support for H3G9I3 as seed ortholog is 100%.

Group of orthologs #598. Best score 308 bits
Score difference with first non-orthologous sequence - C.immitis:308 P.ramorum:117

J3KBL1              	100.00%		H3GKN9              	100.00%
Bootstrap support for J3KBL1 as seed ortholog is 100%.
Bootstrap support for H3GKN9 as seed ortholog is 99%.

Group of orthologs #599. Best score 308 bits
Score difference with first non-orthologous sequence - C.immitis:308 P.ramorum:308

J3K2N9              	100.00%		H3H0F3              	100.00%
Bootstrap support for J3K2N9 as seed ortholog is 100%.
Bootstrap support for H3H0F3 as seed ortholog is 100%.

Group of orthologs #600. Best score 307 bits
Score difference with first non-orthologous sequence - C.immitis:40 P.ramorum:214

J3K7T4              	100.00%		H3GAL4              	100.00%
                    	       		H3H1V1              	75.92%
                    	       		H3G6U0              	36.99%
Bootstrap support for J3K7T4 as seed ortholog is 85%.
Bootstrap support for H3GAL4 as seed ortholog is 100%.

Group of orthologs #601. Best score 307 bits
Score difference with first non-orthologous sequence - C.immitis:117 P.ramorum:307

I9XLB6              	100.00%		H3GA20              	100.00%
J3K4M6              	9.29%		
Bootstrap support for I9XLB6 as seed ortholog is 99%.
Bootstrap support for H3GA20 as seed ortholog is 100%.

Group of orthologs #602. Best score 307 bits
Score difference with first non-orthologous sequence - C.immitis:231 P.ramorum:217

J3K2Z3              	100.00%		H3G9C7              	100.00%
Bootstrap support for J3K2Z3 as seed ortholog is 100%.
Bootstrap support for H3G9C7 as seed ortholog is 100%.

Group of orthologs #603. Best score 307 bits
Score difference with first non-orthologous sequence - C.immitis:254 P.ramorum:201

J3KL64              	100.00%		H3GS79              	100.00%
Bootstrap support for J3KL64 as seed ortholog is 100%.
Bootstrap support for H3GS79 as seed ortholog is 99%.

Group of orthologs #604. Best score 307 bits
Score difference with first non-orthologous sequence - C.immitis:307 P.ramorum:307

J3K7L7              	100.00%		H3H7H5              	100.00%
Bootstrap support for J3K7L7 as seed ortholog is 100%.
Bootstrap support for H3H7H5 as seed ortholog is 100%.

Group of orthologs #605. Best score 305 bits
Score difference with first non-orthologous sequence - C.immitis:305 P.ramorum:224

J3KEQ0              	100.00%		H3GC60              	100.00%
Bootstrap support for J3KEQ0 as seed ortholog is 100%.
Bootstrap support for H3GC60 as seed ortholog is 99%.

Group of orthologs #606. Best score 305 bits
Score difference with first non-orthologous sequence - C.immitis:305 P.ramorum:305

J3K6V8              	100.00%		H3GWM1              	100.00%
Bootstrap support for J3K6V8 as seed ortholog is 100%.
Bootstrap support for H3GWM1 as seed ortholog is 100%.

Group of orthologs #607. Best score 305 bits
Score difference with first non-orthologous sequence - C.immitis:305 P.ramorum:305

J3KH61              	100.00%		H3GLR2              	100.00%
Bootstrap support for J3KH61 as seed ortholog is 100%.
Bootstrap support for H3GLR2 as seed ortholog is 100%.

Group of orthologs #608. Best score 305 bits
Score difference with first non-orthologous sequence - C.immitis:305 P.ramorum:305

J3K3H5              	100.00%		H3H1H9              	100.00%
Bootstrap support for J3K3H5 as seed ortholog is 100%.
Bootstrap support for H3H1H9 as seed ortholog is 100%.

Group of orthologs #609. Best score 304 bits
Score difference with first non-orthologous sequence - C.immitis:304 P.ramorum:304

J3K0Q7              	100.00%		H3GG49              	100.00%
Bootstrap support for J3K0Q7 as seed ortholog is 100%.
Bootstrap support for H3GG49 as seed ortholog is 100%.

Group of orthologs #610. Best score 304 bits
Score difference with first non-orthologous sequence - C.immitis:304 P.ramorum:304

J3KC02              	100.00%		H3G934              	100.00%
Bootstrap support for J3KC02 as seed ortholog is 100%.
Bootstrap support for H3G934 as seed ortholog is 100%.

Group of orthologs #611. Best score 304 bits
Score difference with first non-orthologous sequence - C.immitis:190 P.ramorum:65

J3K2S5              	100.00%		H3HBW3              	100.00%
Bootstrap support for J3K2S5 as seed ortholog is 99%.
Bootstrap support for H3HBW3 as seed ortholog is 92%.

Group of orthologs #612. Best score 303 bits
Score difference with first non-orthologous sequence - C.immitis:303 P.ramorum:303

J3K8S4              	100.00%		H3G5C0              	100.00%
Bootstrap support for J3K8S4 as seed ortholog is 100%.
Bootstrap support for H3G5C0 as seed ortholog is 100%.

Group of orthologs #613. Best score 302 bits
Score difference with first non-orthologous sequence - C.immitis:59 P.ramorum:223

J3K1K2              	100.00%		H3G760              	100.00%
                    	       		H3G989              	7.10%
Bootstrap support for J3K1K2 as seed ortholog is 92%.
Bootstrap support for H3G760 as seed ortholog is 100%.

Group of orthologs #614. Best score 302 bits
Score difference with first non-orthologous sequence - C.immitis:59 P.ramorum:101

J3KA40              	100.00%		H3G8L2              	100.00%
                    	       		H3G8L3              	98.51%
Bootstrap support for J3KA40 as seed ortholog is 99%.
Bootstrap support for H3G8L2 as seed ortholog is 99%.

Group of orthologs #615. Best score 302 bits
Score difference with first non-orthologous sequence - C.immitis:302 P.ramorum:302

J3KFJ5              	100.00%		H3G5C4              	100.00%
Bootstrap support for J3KFJ5 as seed ortholog is 100%.
Bootstrap support for H3G5C4 as seed ortholog is 100%.

Group of orthologs #616. Best score 302 bits
Score difference with first non-orthologous sequence - C.immitis:302 P.ramorum:302

J3KBH0              	100.00%		H3GB03              	100.00%
Bootstrap support for J3KBH0 as seed ortholog is 100%.
Bootstrap support for H3GB03 as seed ortholog is 100%.

Group of orthologs #617. Best score 301 bits
Score difference with first non-orthologous sequence - C.immitis:301 P.ramorum:301

J3KCH7              	100.00%		H3HCL6              	100.00%
Bootstrap support for J3KCH7 as seed ortholog is 100%.
Bootstrap support for H3HCL6 as seed ortholog is 100%.

Group of orthologs #618. Best score 300 bits
Score difference with first non-orthologous sequence - C.immitis:300 P.ramorum:300

J3K4S3              	100.00%		H3G7W7              	100.00%
Bootstrap support for J3K4S3 as seed ortholog is 100%.
Bootstrap support for H3G7W7 as seed ortholog is 100%.

Group of orthologs #619. Best score 300 bits
Score difference with first non-orthologous sequence - C.immitis:300 P.ramorum:300

J3KFJ7              	100.00%		H3GNQ3              	100.00%
Bootstrap support for J3KFJ7 as seed ortholog is 100%.
Bootstrap support for H3GNQ3 as seed ortholog is 100%.

Group of orthologs #620. Best score 300 bits
Score difference with first non-orthologous sequence - C.immitis:300 P.ramorum:300

J3KJX0              	100.00%		H3H1I2              	100.00%
Bootstrap support for J3KJX0 as seed ortholog is 100%.
Bootstrap support for H3H1I2 as seed ortholog is 100%.

Group of orthologs #621. Best score 300 bits
Score difference with first non-orthologous sequence - C.immitis:300 P.ramorum:300

J3KDB8              	100.00%		H3HB33              	100.00%
Bootstrap support for J3KDB8 as seed ortholog is 100%.
Bootstrap support for H3HB33 as seed ortholog is 100%.

Group of orthologs #622. Best score 299 bits
Score difference with first non-orthologous sequence - C.immitis:128 P.ramorum:150

J3K4V2              	100.00%		H3H7L0              	100.00%
                    	       		H3GAZ4              	96.45%
                    	       		H3H7K9              	59.81%
                    	       		H3GCY4              	51.77%
                    	       		H3GAV7              	48.70%
                    	       		H3GAR5              	41.13%
                    	       		H3G998              	40.43%
                    	       		H3GAR6              	39.95%
                    	       		H3G9A0              	39.72%
                    	       		H3GA14              	36.88%
                    	       		H3GAJ7              	33.81%
                    	       		H3G6J3              	5.20%
Bootstrap support for J3K4V2 as seed ortholog is 99%.
Bootstrap support for H3H7L0 as seed ortholog is 100%.

Group of orthologs #623. Best score 299 bits
Score difference with first non-orthologous sequence - C.immitis:299 P.ramorum:299

J3K5Q6              	100.00%		H3G8K1              	100.00%
Bootstrap support for J3K5Q6 as seed ortholog is 100%.
Bootstrap support for H3G8K1 as seed ortholog is 100%.

Group of orthologs #624. Best score 299 bits
Score difference with first non-orthologous sequence - C.immitis:299 P.ramorum:299

I9XK40              	100.00%		H3GJ79              	100.00%
Bootstrap support for I9XK40 as seed ortholog is 100%.
Bootstrap support for H3GJ79 as seed ortholog is 100%.

Group of orthologs #625. Best score 299 bits
Score difference with first non-orthologous sequence - C.immitis:138 P.ramorum:106

J3K8B8              	100.00%		H3G8U7              	100.00%
Bootstrap support for J3K8B8 as seed ortholog is 100%.
Bootstrap support for H3G8U7 as seed ortholog is 100%.

Group of orthologs #626. Best score 298 bits
Score difference with first non-orthologous sequence - C.immitis:298 P.ramorum:298

I9XL94              	100.00%		H3G4X8              	100.00%
Bootstrap support for I9XL94 as seed ortholog is 100%.
Bootstrap support for H3G4X8 as seed ortholog is 100%.

Group of orthologs #627. Best score 298 bits
Score difference with first non-orthologous sequence - C.immitis:298 P.ramorum:298

J3K680              	100.00%		H3GLH2              	100.00%
Bootstrap support for J3K680 as seed ortholog is 100%.
Bootstrap support for H3GLH2 as seed ortholog is 100%.

Group of orthologs #628. Best score 298 bits
Score difference with first non-orthologous sequence - C.immitis:298 P.ramorum:298

J3KII4              	100.00%		H3GKY3              	100.00%
Bootstrap support for J3KII4 as seed ortholog is 100%.
Bootstrap support for H3GKY3 as seed ortholog is 100%.

Group of orthologs #629. Best score 298 bits
Score difference with first non-orthologous sequence - C.immitis:78 P.ramorum:63

J3KLV0              	100.00%		H3H2X6              	100.00%
Bootstrap support for J3KLV0 as seed ortholog is 94%.
Bootstrap support for H3H2X6 as seed ortholog is 99%.

Group of orthologs #630. Best score 297 bits
Score difference with first non-orthologous sequence - C.immitis:297 P.ramorum:297

J3KDJ3              	100.00%		H3G8K5              	100.00%
Bootstrap support for J3KDJ3 as seed ortholog is 100%.
Bootstrap support for H3G8K5 as seed ortholog is 100%.

Group of orthologs #631. Best score 297 bits
Score difference with first non-orthologous sequence - C.immitis:297 P.ramorum:297

I9NPQ2              	100.00%		H3GXW6              	100.00%
Bootstrap support for I9NPQ2 as seed ortholog is 100%.
Bootstrap support for H3GXW6 as seed ortholog is 100%.

Group of orthologs #632. Best score 297 bits
Score difference with first non-orthologous sequence - C.immitis:297 P.ramorum:297

J3K254              	100.00%		H3GSS3              	100.00%
Bootstrap support for J3K254 as seed ortholog is 100%.
Bootstrap support for H3GSS3 as seed ortholog is 100%.

Group of orthologs #633. Best score 296 bits
Score difference with first non-orthologous sequence - C.immitis:296 P.ramorum:296

J3KCR6              	100.00%		H3G9T2              	100.00%
Bootstrap support for J3KCR6 as seed ortholog is 100%.
Bootstrap support for H3G9T2 as seed ortholog is 100%.

Group of orthologs #634. Best score 296 bits
Score difference with first non-orthologous sequence - C.immitis:296 P.ramorum:296

J3K6Z6              	100.00%		H3GSD7              	100.00%
Bootstrap support for J3K6Z6 as seed ortholog is 100%.
Bootstrap support for H3GSD7 as seed ortholog is 100%.

Group of orthologs #635. Best score 295 bits
Score difference with first non-orthologous sequence - C.immitis:295 P.ramorum:156

J3KIB9              	100.00%		H3G9Y7              	100.00%
Bootstrap support for J3KIB9 as seed ortholog is 100%.
Bootstrap support for H3G9Y7 as seed ortholog is 99%.

Group of orthologs #636. Best score 295 bits
Score difference with first non-orthologous sequence - C.immitis:295 P.ramorum:295

J3KG14              	100.00%		H3GFF0              	100.00%
Bootstrap support for J3KG14 as seed ortholog is 100%.
Bootstrap support for H3GFF0 as seed ortholog is 100%.

Group of orthologs #637. Best score 295 bits
Score difference with first non-orthologous sequence - C.immitis:295 P.ramorum:295

J3KL12              	100.00%		H3GEK8              	100.00%
Bootstrap support for J3KL12 as seed ortholog is 100%.
Bootstrap support for H3GEK8 as seed ortholog is 100%.

Group of orthologs #638. Best score 294 bits
Score difference with first non-orthologous sequence - C.immitis:294 P.ramorum:294

J3K5X0              	100.00%		H3GJZ0              	100.00%
J3KAP8              	8.94%		H3HBU6              	46.24%
                    	       		H3GJX3              	28.96%
Bootstrap support for J3K5X0 as seed ortholog is 100%.
Bootstrap support for H3GJZ0 as seed ortholog is 100%.

Group of orthologs #639. Best score 294 bits
Score difference with first non-orthologous sequence - C.immitis:294 P.ramorum:294

J3K2J1              	100.00%		H3G6D9              	100.00%
Bootstrap support for J3K2J1 as seed ortholog is 100%.
Bootstrap support for H3G6D9 as seed ortholog is 100%.

Group of orthologs #640. Best score 294 bits
Score difference with first non-orthologous sequence - C.immitis:294 P.ramorum:35

J3K2P0              	100.00%		H3G803              	100.00%
Bootstrap support for J3K2P0 as seed ortholog is 100%.
Bootstrap support for H3G803 as seed ortholog is 80%.

Group of orthologs #641. Best score 294 bits
Score difference with first non-orthologous sequence - C.immitis:294 P.ramorum:294

J3KJ76              	100.00%		H3GAD9              	100.00%
Bootstrap support for J3KJ76 as seed ortholog is 100%.
Bootstrap support for H3GAD9 as seed ortholog is 100%.

Group of orthologs #642. Best score 294 bits
Score difference with first non-orthologous sequence - C.immitis:294 P.ramorum:294

J3KIL6              	100.00%		H3GTZ8              	100.00%
Bootstrap support for J3KIL6 as seed ortholog is 100%.
Bootstrap support for H3GTZ8 as seed ortholog is 100%.

Group of orthologs #643. Best score 294 bits
Score difference with first non-orthologous sequence - C.immitis:294 P.ramorum:294

J3K8S5              	100.00%		H3HB70              	100.00%
Bootstrap support for J3K8S5 as seed ortholog is 100%.
Bootstrap support for H3HB70 as seed ortholog is 100%.

Group of orthologs #644. Best score 293 bits
Score difference with first non-orthologous sequence - C.immitis:293 P.ramorum:293

J3KH40              	100.00%		H3H2P4              	100.00%
Bootstrap support for J3KH40 as seed ortholog is 100%.
Bootstrap support for H3H2P4 as seed ortholog is 100%.

Group of orthologs #645. Best score 292 bits
Score difference with first non-orthologous sequence - C.immitis:292 P.ramorum:292

I9NT40              	100.00%		H3G783              	100.00%
Bootstrap support for I9NT40 as seed ortholog is 100%.
Bootstrap support for H3G783 as seed ortholog is 100%.

Group of orthologs #646. Best score 292 bits
Score difference with first non-orthologous sequence - C.immitis:292 P.ramorum:292

J0HH62              	100.00%		H3G859              	100.00%
Bootstrap support for J0HH62 as seed ortholog is 100%.
Bootstrap support for H3G859 as seed ortholog is 100%.

Group of orthologs #647. Best score 292 bits
Score difference with first non-orthologous sequence - C.immitis:292 P.ramorum:134

I9NNU2              	100.00%		H3GEE0              	100.00%
Bootstrap support for I9NNU2 as seed ortholog is 100%.
Bootstrap support for H3GEE0 as seed ortholog is 99%.

Group of orthologs #648. Best score 292 bits
Score difference with first non-orthologous sequence - C.immitis:87 P.ramorum:292

J3K7J7              	100.00%		H3G912              	100.00%
Bootstrap support for J3K7J7 as seed ortholog is 99%.
Bootstrap support for H3G912 as seed ortholog is 100%.

Group of orthologs #649. Best score 292 bits
Score difference with first non-orthologous sequence - C.immitis:292 P.ramorum:292

J3KEY3              	100.00%		H3G993              	100.00%
Bootstrap support for J3KEY3 as seed ortholog is 100%.
Bootstrap support for H3G993 as seed ortholog is 100%.

Group of orthologs #650. Best score 292 bits
Score difference with first non-orthologous sequence - C.immitis:292 P.ramorum:230

Q1DPU4              	100.00%		H3GAG1              	100.00%
Bootstrap support for Q1DPU4 as seed ortholog is 100%.
Bootstrap support for H3GAG1 as seed ortholog is 100%.

Group of orthologs #651. Best score 292 bits
Score difference with first non-orthologous sequence - C.immitis:292 P.ramorum:292

J3K6E3              	100.00%		H3GTW5              	100.00%
Bootstrap support for J3K6E3 as seed ortholog is 100%.
Bootstrap support for H3GTW5 as seed ortholog is 100%.

Group of orthologs #652. Best score 291 bits
Score difference with first non-orthologous sequence - C.immitis:291 P.ramorum:291

J3KJQ1              	100.00%		H3HC28              	100.00%
                    	       		H3GLI1              	66.84%
Bootstrap support for J3KJQ1 as seed ortholog is 100%.
Bootstrap support for H3HC28 as seed ortholog is 100%.

Group of orthologs #653. Best score 291 bits
Score difference with first non-orthologous sequence - C.immitis:291 P.ramorum:291

J3K753              	100.00%		H3G994              	100.00%
Bootstrap support for J3K753 as seed ortholog is 100%.
Bootstrap support for H3G994 as seed ortholog is 100%.

Group of orthologs #654. Best score 291 bits
Score difference with first non-orthologous sequence - C.immitis:234 P.ramorum:291

J3K6X3              	100.00%		H3GA67              	100.00%
Bootstrap support for J3K6X3 as seed ortholog is 100%.
Bootstrap support for H3GA67 as seed ortholog is 100%.

Group of orthologs #655. Best score 291 bits
Score difference with first non-orthologous sequence - C.immitis:291 P.ramorum:291

J3K8M2              	100.00%		H3G8T3              	100.00%
Bootstrap support for J3K8M2 as seed ortholog is 100%.
Bootstrap support for H3G8T3 as seed ortholog is 100%.

Group of orthologs #656. Best score 291 bits
Score difference with first non-orthologous sequence - C.immitis:203 P.ramorum:212

J3K7C8              	100.00%		H3GBF8              	100.00%
Bootstrap support for J3K7C8 as seed ortholog is 99%.
Bootstrap support for H3GBF8 as seed ortholog is 100%.

Group of orthologs #657. Best score 291 bits
Score difference with first non-orthologous sequence - C.immitis:291 P.ramorum:291

J3KHC6              	100.00%		H3GNL2              	100.00%
Bootstrap support for J3KHC6 as seed ortholog is 100%.
Bootstrap support for H3GNL2 as seed ortholog is 100%.

Group of orthologs #658. Best score 291 bits
Score difference with first non-orthologous sequence - C.immitis:291 P.ramorum:291

J3KEY2              	100.00%		H3GT71              	100.00%
Bootstrap support for J3KEY2 as seed ortholog is 100%.
Bootstrap support for H3GT71 as seed ortholog is 100%.

Group of orthologs #659. Best score 290 bits
Score difference with first non-orthologous sequence - C.immitis:23 P.ramorum:202

I9XJE9              	100.00%		H3GB56              	100.00%
                    	       		H3GAE8              	86.36%
Bootstrap support for I9XJE9 as seed ortholog is 82%.
Bootstrap support for H3GB56 as seed ortholog is 100%.

Group of orthologs #660. Best score 290 bits
Score difference with first non-orthologous sequence - C.immitis:290 P.ramorum:290

J3K515              	100.00%		H3GL87              	100.00%
Bootstrap support for J3K515 as seed ortholog is 100%.
Bootstrap support for H3GL87 as seed ortholog is 100%.

Group of orthologs #661. Best score 290 bits
Score difference with first non-orthologous sequence - C.immitis:234 P.ramorum:290

J3KLY9              	100.00%		H3G7T3              	100.00%
Bootstrap support for J3KLY9 as seed ortholog is 100%.
Bootstrap support for H3G7T3 as seed ortholog is 100%.

Group of orthologs #662. Best score 289 bits
Score difference with first non-orthologous sequence - C.immitis:238 P.ramorum:99

Q1DZQ0              	100.00%		H3GAW1              	100.00%
                    	       		H3GJ37              	6.91%
Bootstrap support for Q1DZQ0 as seed ortholog is 100%.
Bootstrap support for H3GAW1 as seed ortholog is 99%.

Group of orthologs #663. Best score 289 bits
Score difference with first non-orthologous sequence - C.immitis:206 P.ramorum:127

J3K7U4              	100.00%		H3G7L2              	100.00%
Bootstrap support for J3K7U4 as seed ortholog is 99%.
Bootstrap support for H3G7L2 as seed ortholog is 97%.

Group of orthologs #664. Best score 289 bits
Score difference with first non-orthologous sequence - C.immitis:289 P.ramorum:289

J3K9Q6              	100.00%		H3G9T7              	100.00%
Bootstrap support for J3K9Q6 as seed ortholog is 100%.
Bootstrap support for H3G9T7 as seed ortholog is 100%.

Group of orthologs #665. Best score 289 bits
Score difference with first non-orthologous sequence - C.immitis:289 P.ramorum:289

J3K9C9              	100.00%		H3GE11              	100.00%
Bootstrap support for J3K9C9 as seed ortholog is 100%.
Bootstrap support for H3GE11 as seed ortholog is 100%.

Group of orthologs #666. Best score 288 bits
Score difference with first non-orthologous sequence - C.immitis:73 P.ramorum:288

J0HHY5              	100.00%		H3GBY6              	100.00%
Bootstrap support for J0HHY5 as seed ortholog is 95%.
Bootstrap support for H3GBY6 as seed ortholog is 100%.

Group of orthologs #667. Best score 288 bits
Score difference with first non-orthologous sequence - C.immitis:288 P.ramorum:288

J3K9U5              	100.00%		H3G9L1              	100.00%
Bootstrap support for J3K9U5 as seed ortholog is 100%.
Bootstrap support for H3G9L1 as seed ortholog is 100%.

Group of orthologs #668. Best score 287 bits
Score difference with first non-orthologous sequence - C.immitis:133 P.ramorum:234

I9NP76              	100.00%		H3G890              	100.00%
Bootstrap support for I9NP76 as seed ortholog is 99%.
Bootstrap support for H3G890 as seed ortholog is 100%.

Group of orthologs #669. Best score 287 bits
Score difference with first non-orthologous sequence - C.immitis:287 P.ramorum:287

J3K7G8              	100.00%		H3G8C3              	100.00%
Bootstrap support for J3K7G8 as seed ortholog is 100%.
Bootstrap support for H3G8C3 as seed ortholog is 100%.

Group of orthologs #670. Best score 287 bits
Score difference with first non-orthologous sequence - C.immitis:287 P.ramorum:287

J3KBC4              	100.00%		H3G7F6              	100.00%
Bootstrap support for J3KBC4 as seed ortholog is 100%.
Bootstrap support for H3G7F6 as seed ortholog is 100%.

Group of orthologs #671. Best score 287 bits
Score difference with first non-orthologous sequence - C.immitis:180 P.ramorum:149

J3KCU0              	100.00%		H3G8S2              	100.00%
Bootstrap support for J3KCU0 as seed ortholog is 100%.
Bootstrap support for H3G8S2 as seed ortholog is 99%.

Group of orthologs #672. Best score 286 bits
Score difference with first non-orthologous sequence - C.immitis:286 P.ramorum:179

J3K654              	100.00%		H3GGA5              	100.00%
                    	       		H3GX82              	6.44%
Bootstrap support for J3K654 as seed ortholog is 100%.
Bootstrap support for H3GGA5 as seed ortholog is 99%.

Group of orthologs #673. Best score 285 bits
Score difference with first non-orthologous sequence - C.immitis:218 P.ramorum:167

J3K4R2              	100.00%		H3G945              	100.00%
Bootstrap support for J3K4R2 as seed ortholog is 100%.
Bootstrap support for H3G945 as seed ortholog is 99%.

Group of orthologs #674. Best score 285 bits
Score difference with first non-orthologous sequence - C.immitis:285 P.ramorum:285

J3KLL6              	100.00%		H3GZT4              	100.00%
Bootstrap support for J3KLL6 as seed ortholog is 100%.
Bootstrap support for H3GZT4 as seed ortholog is 100%.

Group of orthologs #675. Best score 284 bits
Score difference with first non-orthologous sequence - C.immitis:177 P.ramorum:105

J3KAK7              	100.00%		H3G737              	100.00%
Bootstrap support for J3KAK7 as seed ortholog is 99%.
Bootstrap support for H3G737 as seed ortholog is 99%.

Group of orthologs #676. Best score 284 bits
Score difference with first non-orthologous sequence - C.immitis:284 P.ramorum:284

J3KE97              	100.00%		H3G8R9              	100.00%
Bootstrap support for J3KE97 as seed ortholog is 100%.
Bootstrap support for H3G8R9 as seed ortholog is 100%.

Group of orthologs #677. Best score 284 bits
Score difference with first non-orthologous sequence - C.immitis:284 P.ramorum:284

J3KF46              	100.00%		H3G980              	100.00%
Bootstrap support for J3KF46 as seed ortholog is 100%.
Bootstrap support for H3G980 as seed ortholog is 100%.

Group of orthologs #678. Best score 283 bits
Score difference with first non-orthologous sequence - C.immitis:283 P.ramorum:224

J3K9Q1              	100.00%		H3GA02              	100.00%
J3K0G4              	10.59%		
J3K7H3              	9.65%		
Bootstrap support for J3K9Q1 as seed ortholog is 100%.
Bootstrap support for H3GA02 as seed ortholog is 100%.

Group of orthologs #679. Best score 283 bits
Score difference with first non-orthologous sequence - C.immitis:283 P.ramorum:283

J0HHJ1              	100.00%		H3G972              	100.00%
Bootstrap support for J0HHJ1 as seed ortholog is 100%.
Bootstrap support for H3G972 as seed ortholog is 100%.

Group of orthologs #680. Best score 283 bits
Score difference with first non-orthologous sequence - C.immitis:283 P.ramorum:283

J3KKY1              	100.00%		H3G8T1              	100.00%
Bootstrap support for J3KKY1 as seed ortholog is 100%.
Bootstrap support for H3G8T1 as seed ortholog is 100%.

Group of orthologs #681. Best score 283 bits
Score difference with first non-orthologous sequence - C.immitis:283 P.ramorum:283

J3KLT1              	100.00%		H3HCZ5              	100.00%
Bootstrap support for J3KLT1 as seed ortholog is 100%.
Bootstrap support for H3HCZ5 as seed ortholog is 100%.

Group of orthologs #682. Best score 282 bits
Score difference with first non-orthologous sequence - C.immitis:282 P.ramorum:282

I9NMG4              	100.00%		H3G9I2              	100.00%
Bootstrap support for I9NMG4 as seed ortholog is 100%.
Bootstrap support for H3G9I2 as seed ortholog is 100%.

Group of orthologs #683. Best score 282 bits
Score difference with first non-orthologous sequence - C.immitis:282 P.ramorum:282

J3KBG8              	100.00%		H3G5B2              	100.00%
Bootstrap support for J3KBG8 as seed ortholog is 100%.
Bootstrap support for H3G5B2 as seed ortholog is 100%.

Group of orthologs #684. Best score 281 bits
Score difference with first non-orthologous sequence - C.immitis:79 P.ramorum:57

J3K8I6              	100.00%		H3G4Z5              	100.00%
Bootstrap support for J3K8I6 as seed ortholog is 98%.
Bootstrap support for H3G4Z5 as seed ortholog is 92%.

Group of orthologs #685. Best score 281 bits
Score difference with first non-orthologous sequence - C.immitis:281 P.ramorum:281

J3K4C8              	100.00%		H3GVC2              	100.00%
Bootstrap support for J3K4C8 as seed ortholog is 100%.
Bootstrap support for H3GVC2 as seed ortholog is 100%.

Group of orthologs #686. Best score 280 bits
Score difference with first non-orthologous sequence - C.immitis:280 P.ramorum:39

J3K6N3              	100.00%		H3GC21              	100.00%
Bootstrap support for J3K6N3 as seed ortholog is 100%.
Bootstrap support for H3GC21 as seed ortholog is 71%.
Alternative seed ortholog is H3GBY9 (39 bits away from this cluster)

Group of orthologs #687. Best score 280 bits
Score difference with first non-orthologous sequence - C.immitis:280 P.ramorum:280

J3KEJ9              	100.00%		H3GBQ6              	100.00%
Bootstrap support for J3KEJ9 as seed ortholog is 100%.
Bootstrap support for H3GBQ6 as seed ortholog is 100%.

Group of orthologs #688. Best score 280 bits
Score difference with first non-orthologous sequence - C.immitis:280 P.ramorum:280

J3KLA3              	100.00%		H3GN45              	100.00%
Bootstrap support for J3KLA3 as seed ortholog is 100%.
Bootstrap support for H3GN45 as seed ortholog is 100%.

Group of orthologs #689. Best score 279 bits
Score difference with first non-orthologous sequence - C.immitis:205 P.ramorum:279

J3K2W8              	100.00%		H3G9A8              	100.00%
                    	       		H3G8F9              	47.42%
Bootstrap support for J3K2W8 as seed ortholog is 100%.
Bootstrap support for H3G9A8 as seed ortholog is 100%.

Group of orthologs #690. Best score 279 bits
Score difference with first non-orthologous sequence - C.immitis:114 P.ramorum:186

J3K026              	100.00%		H3G8W7              	100.00%
Bootstrap support for J3K026 as seed ortholog is 99%.
Bootstrap support for H3G8W7 as seed ortholog is 100%.

Group of orthologs #691. Best score 279 bits
Score difference with first non-orthologous sequence - C.immitis:182 P.ramorum:279

J3K656              	100.00%		H3G5E3              	100.00%
Bootstrap support for J3K656 as seed ortholog is 100%.
Bootstrap support for H3G5E3 as seed ortholog is 100%.

Group of orthologs #692. Best score 279 bits
Score difference with first non-orthologous sequence - C.immitis:279 P.ramorum:279

J3KIE5              	100.00%		H3G5G9              	100.00%
Bootstrap support for J3KIE5 as seed ortholog is 100%.
Bootstrap support for H3G5G9 as seed ortholog is 100%.

Group of orthologs #693. Best score 277 bits
Score difference with first non-orthologous sequence - C.immitis:151 P.ramorum:156

J3KHA7              	100.00%		H3GQ46              	100.00%
                    	       		H3GAB1              	27.51%
Bootstrap support for J3KHA7 as seed ortholog is 99%.
Bootstrap support for H3GQ46 as seed ortholog is 99%.

Group of orthologs #694. Best score 277 bits
Score difference with first non-orthologous sequence - C.immitis:277 P.ramorum:277

I9NRM1              	100.00%		H3G7S8              	100.00%
Bootstrap support for I9NRM1 as seed ortholog is 100%.
Bootstrap support for H3G7S8 as seed ortholog is 100%.

Group of orthologs #695. Best score 277 bits
Score difference with first non-orthologous sequence - C.immitis:277 P.ramorum:277

J3K0G8              	100.00%		H3GAD3              	100.00%
Bootstrap support for J3K0G8 as seed ortholog is 100%.
Bootstrap support for H3GAD3 as seed ortholog is 100%.

Group of orthologs #696. Best score 277 bits
Score difference with first non-orthologous sequence - C.immitis:277 P.ramorum:277

J3K0N5              	100.00%		H3GAP0              	100.00%
Bootstrap support for J3K0N5 as seed ortholog is 100%.
Bootstrap support for H3GAP0 as seed ortholog is 100%.

Group of orthologs #697. Best score 277 bits
Score difference with first non-orthologous sequence - C.immitis:277 P.ramorum:277

J3K661              	100.00%		H3G854              	100.00%
Bootstrap support for J3K661 as seed ortholog is 100%.
Bootstrap support for H3G854 as seed ortholog is 100%.

Group of orthologs #698. Best score 277 bits
Score difference with first non-orthologous sequence - C.immitis:277 P.ramorum:277

J3KF34              	100.00%		H3GAH9              	100.00%
Bootstrap support for J3KF34 as seed ortholog is 100%.
Bootstrap support for H3GAH9 as seed ortholog is 100%.

Group of orthologs #699. Best score 275 bits
Score difference with first non-orthologous sequence - C.immitis:65 P.ramorum:163

J3KDH2              	100.00%		H3G7Y1              	100.00%
                    	       		H3HDZ1              	62.76%
                    	       		H3G7Y2              	61.12%
Bootstrap support for J3KDH2 as seed ortholog is 91%.
Bootstrap support for H3G7Y1 as seed ortholog is 99%.

Group of orthologs #700. Best score 275 bits
Score difference with first non-orthologous sequence - C.immitis:275 P.ramorum:275

I9NS04              	100.00%		H3G9C6              	100.00%
Bootstrap support for I9NS04 as seed ortholog is 100%.
Bootstrap support for H3G9C6 as seed ortholog is 100%.

Group of orthologs #701. Best score 275 bits
Score difference with first non-orthologous sequence - C.immitis:275 P.ramorum:275

J3K5S6              	100.00%		H3G7V7              	100.00%
Bootstrap support for J3K5S6 as seed ortholog is 100%.
Bootstrap support for H3G7V7 as seed ortholog is 100%.

Group of orthologs #702. Best score 274 bits
Score difference with first non-orthologous sequence - C.immitis:274 P.ramorum:213

J3KL61              	100.00%		H3G902              	100.00%
                    	       		H3G900              	84.90%
                    	       		H3GJX8              	82.55%
                    	       		H3G901              	26.82%
                    	       		H3G6I2              	11.20%
Bootstrap support for J3KL61 as seed ortholog is 100%.
Bootstrap support for H3G902 as seed ortholog is 100%.

Group of orthologs #703. Best score 274 bits
Score difference with first non-orthologous sequence - C.immitis:274 P.ramorum:274

J0HGE3              	100.00%		H3G9U4              	100.00%
Bootstrap support for J0HGE3 as seed ortholog is 100%.
Bootstrap support for H3G9U4 as seed ortholog is 100%.

Group of orthologs #704. Best score 274 bits
Score difference with first non-orthologous sequence - C.immitis:274 P.ramorum:274

J3K8P7              	100.00%		H3GBZ7              	100.00%
Bootstrap support for J3K8P7 as seed ortholog is 100%.
Bootstrap support for H3GBZ7 as seed ortholog is 100%.

Group of orthologs #705. Best score 273 bits
Score difference with first non-orthologous sequence - C.immitis:143 P.ramorum:273

J0HFE8              	100.00%		H3GSZ7              	100.00%
Bootstrap support for J0HFE8 as seed ortholog is 99%.
Bootstrap support for H3GSZ7 as seed ortholog is 100%.

Group of orthologs #706. Best score 273 bits
Score difference with first non-orthologous sequence - C.immitis:273 P.ramorum:273

J3KIF6              	100.00%		H3G927              	100.00%
Bootstrap support for J3KIF6 as seed ortholog is 100%.
Bootstrap support for H3G927 as seed ortholog is 100%.

Group of orthologs #707. Best score 272 bits
Score difference with first non-orthologous sequence - C.immitis:26 P.ramorum:272

J3KM46              	100.00%		H3G6G2              	100.00%
                    	       		H3GB26              	100.00%
Bootstrap support for J3KM46 as seed ortholog is 77%.
Bootstrap support for H3G6G2 as seed ortholog is 100%.
Bootstrap support for H3GB26 as seed ortholog is 100%.

Group of orthologs #708. Best score 272 bits
Score difference with first non-orthologous sequence - C.immitis:272 P.ramorum:272

J0HHH5              	100.00%		H3G8Y1              	100.00%
Bootstrap support for J0HHH5 as seed ortholog is 100%.
Bootstrap support for H3G8Y1 as seed ortholog is 100%.

Group of orthologs #709. Best score 272 bits
Score difference with first non-orthologous sequence - C.immitis:272 P.ramorum:133

J3K3P6              	100.00%		H3G8N1              	100.00%
Bootstrap support for J3K3P6 as seed ortholog is 100%.
Bootstrap support for H3G8N1 as seed ortholog is 100%.

Group of orthologs #710. Best score 272 bits
Score difference with first non-orthologous sequence - C.immitis:272 P.ramorum:272

J3KCK6              	100.00%		H3G9M2              	100.00%
Bootstrap support for J3KCK6 as seed ortholog is 100%.
Bootstrap support for H3G9M2 as seed ortholog is 100%.

Group of orthologs #711. Best score 272 bits
Score difference with first non-orthologous sequence - C.immitis:220 P.ramorum:272

J3K0G0              	100.00%		H3GRM9              	100.00%
Bootstrap support for J3K0G0 as seed ortholog is 99%.
Bootstrap support for H3GRM9 as seed ortholog is 100%.

Group of orthologs #712. Best score 272 bits
Score difference with first non-orthologous sequence - C.immitis:272 P.ramorum:272

J3K9B2              	100.00%		H3GZ97              	100.00%
Bootstrap support for J3K9B2 as seed ortholog is 100%.
Bootstrap support for H3GZ97 as seed ortholog is 100%.

Group of orthologs #713. Best score 272 bits
Score difference with first non-orthologous sequence - C.immitis:272 P.ramorum:272

J3KBT9              	100.00%		H3H4A6              	100.00%
Bootstrap support for J3KBT9 as seed ortholog is 100%.
Bootstrap support for H3H4A6 as seed ortholog is 100%.

Group of orthologs #714. Best score 272 bits
Score difference with first non-orthologous sequence - C.immitis:118 P.ramorum:272

J3KHS8              	100.00%		H3HBV1              	100.00%
Bootstrap support for J3KHS8 as seed ortholog is 99%.
Bootstrap support for H3HBV1 as seed ortholog is 100%.

Group of orthologs #715. Best score 271 bits
Score difference with first non-orthologous sequence - C.immitis:81 P.ramorum:187

J3K4J0              	100.00%		H3G9X5              	100.00%
                    	       		H3GV89              	77.16%
Bootstrap support for J3K4J0 as seed ortholog is 98%.
Bootstrap support for H3G9X5 as seed ortholog is 100%.

Group of orthologs #716. Best score 271 bits
Score difference with first non-orthologous sequence - C.immitis:200 P.ramorum:271

J3K2P6              	100.00%		H3GD20              	100.00%
Bootstrap support for J3K2P6 as seed ortholog is 100%.
Bootstrap support for H3GD20 as seed ortholog is 100%.

Group of orthologs #717. Best score 270 bits
Score difference with first non-orthologous sequence - C.immitis:270 P.ramorum:270

J0HGH6              	100.00%		H3H3V4              	100.00%
J3KA91              	13.26%		H3GK03              	31.19%
Bootstrap support for J0HGH6 as seed ortholog is 100%.
Bootstrap support for H3H3V4 as seed ortholog is 100%.

Group of orthologs #718. Best score 270 bits
Score difference with first non-orthologous sequence - C.immitis:270 P.ramorum:174

J0HFX5              	100.00%		H3G4X6              	100.00%
Bootstrap support for J0HFX5 as seed ortholog is 100%.
Bootstrap support for H3G4X6 as seed ortholog is 100%.

Group of orthologs #719. Best score 270 bits
Score difference with first non-orthologous sequence - C.immitis:157 P.ramorum:169

I9NNB3              	100.00%		H3GA11              	100.00%
Bootstrap support for I9NNB3 as seed ortholog is 100%.
Bootstrap support for H3GA11 as seed ortholog is 100%.

Group of orthologs #720. Best score 270 bits
Score difference with first non-orthologous sequence - C.immitis:270 P.ramorum:270

I9NT75              	100.00%		H3GAN3              	100.00%
Bootstrap support for I9NT75 as seed ortholog is 100%.
Bootstrap support for H3GAN3 as seed ortholog is 100%.

Group of orthologs #721. Best score 270 bits
Score difference with first non-orthologous sequence - C.immitis:270 P.ramorum:270

J3K144              	100.00%		H3G7D8              	100.00%
Bootstrap support for J3K144 as seed ortholog is 100%.
Bootstrap support for H3G7D8 as seed ortholog is 100%.

Group of orthologs #722. Best score 270 bits
Score difference with first non-orthologous sequence - C.immitis:270 P.ramorum:270

Q1E6Q3              	100.00%		H3GMY0              	100.00%
Bootstrap support for Q1E6Q3 as seed ortholog is 100%.
Bootstrap support for H3GMY0 as seed ortholog is 100%.

Group of orthologs #723. Best score 270 bits
Score difference with first non-orthologous sequence - C.immitis:270 P.ramorum:270

J3KIV6              	100.00%		H3GS31              	100.00%
Bootstrap support for J3KIV6 as seed ortholog is 100%.
Bootstrap support for H3GS31 as seed ortholog is 100%.

Group of orthologs #724. Best score 270 bits
Score difference with first non-orthologous sequence - C.immitis:270 P.ramorum:270

J3K2G3              	100.00%		H3HED0              	100.00%
Bootstrap support for J3K2G3 as seed ortholog is 100%.
Bootstrap support for H3HED0 as seed ortholog is 100%.

Group of orthologs #725. Best score 270 bits
Score difference with first non-orthologous sequence - C.immitis:192 P.ramorum:270

Q1DKE7              	100.00%		H3HDA1              	100.00%
Bootstrap support for Q1DKE7 as seed ortholog is 99%.
Bootstrap support for H3HDA1 as seed ortholog is 100%.

Group of orthologs #726. Best score 269 bits
Score difference with first non-orthologous sequence - C.immitis:37 P.ramorum:26

J3K0S0              	100.00%		H3GMZ2              	100.00%
Bootstrap support for J3K0S0 as seed ortholog is 56%.
Alternative seed ortholog is J0HFZ5 (37 bits away from this cluster)
Bootstrap support for H3GMZ2 as seed ortholog is 72%.
Alternative seed ortholog is H3H452 (26 bits away from this cluster)

Group of orthologs #727. Best score 269 bits
Score difference with first non-orthologous sequence - C.immitis:269 P.ramorum:123

J3KED9              	100.00%		H3H368              	100.00%
Bootstrap support for J3KED9 as seed ortholog is 100%.
Bootstrap support for H3H368 as seed ortholog is 99%.

Group of orthologs #728. Best score 269 bits
Score difference with first non-orthologous sequence - C.immitis:269 P.ramorum:198

P0CL21              	100.00%		H3HCG4              	100.00%
Bootstrap support for P0CL21 as seed ortholog is 100%.
Bootstrap support for H3HCG4 as seed ortholog is 100%.

Group of orthologs #729. Best score 268 bits
Score difference with first non-orthologous sequence - C.immitis:268 P.ramorum:268

Q1E9Q9              	100.00%		H3GUZ7              	100.00%
                    	       		H3GHT8              	5.96%
Bootstrap support for Q1E9Q9 as seed ortholog is 100%.
Bootstrap support for H3GUZ7 as seed ortholog is 100%.

Group of orthologs #730. Best score 268 bits
Score difference with first non-orthologous sequence - C.immitis:61 P.ramorum:88

J3K8Q4              	100.00%		H3G6B6              	100.00%
Bootstrap support for J3K8Q4 as seed ortholog is 93%.
Bootstrap support for H3G6B6 as seed ortholog is 99%.

Group of orthologs #731. Best score 268 bits
Score difference with first non-orthologous sequence - C.immitis:268 P.ramorum:268

J3KFM2              	100.00%		H3GAK1              	100.00%
Bootstrap support for J3KFM2 as seed ortholog is 100%.
Bootstrap support for H3GAK1 as seed ortholog is 100%.

Group of orthologs #732. Best score 268 bits
Score difference with first non-orthologous sequence - C.immitis:268 P.ramorum:268

J3KK53              	100.00%		H3HCS0              	100.00%
Bootstrap support for J3KK53 as seed ortholog is 100%.
Bootstrap support for H3HCS0 as seed ortholog is 100%.

Group of orthologs #733. Best score 267 bits
Score difference with first non-orthologous sequence - C.immitis:267 P.ramorum:267

J3KIH5              	100.00%		H3G635              	100.00%
                    	       		H3G636              	69.96%
                    	       		H3GKW0              	67.08%
                    	       		H3G638              	41.98%
Bootstrap support for J3KIH5 as seed ortholog is 100%.
Bootstrap support for H3G635 as seed ortholog is 100%.

Group of orthologs #734. Best score 267 bits
Score difference with first non-orthologous sequence - C.immitis:267 P.ramorum:267

J3K1L1              	100.00%		H3HCH5              	100.00%
                    	       		H3HAU2              	6.17%
Bootstrap support for J3K1L1 as seed ortholog is 100%.
Bootstrap support for H3HCH5 as seed ortholog is 100%.

Group of orthologs #735. Best score 267 bits
Score difference with first non-orthologous sequence - C.immitis:267 P.ramorum:267

I9NQB5              	100.00%		H3GA31              	100.00%
Bootstrap support for I9NQB5 as seed ortholog is 100%.
Bootstrap support for H3GA31 as seed ortholog is 100%.

Group of orthologs #736. Best score 267 bits
Score difference with first non-orthologous sequence - C.immitis:122 P.ramorum:130

J3K5M4              	100.00%		H3G867              	100.00%
Bootstrap support for J3K5M4 as seed ortholog is 99%.
Bootstrap support for H3G867 as seed ortholog is 99%.

Group of orthologs #737. Best score 267 bits
Score difference with first non-orthologous sequence - C.immitis:267 P.ramorum:267

J3KM71              	100.00%		H3G805              	100.00%
Bootstrap support for J3KM71 as seed ortholog is 100%.
Bootstrap support for H3G805 as seed ortholog is 100%.

Group of orthologs #738. Best score 267 bits
Score difference with first non-orthologous sequence - C.immitis:96 P.ramorum:267

J3KJK8              	100.00%		H3H7P1              	100.00%
Bootstrap support for J3KJK8 as seed ortholog is 92%.
Bootstrap support for H3H7P1 as seed ortholog is 100%.

Group of orthologs #739. Best score 267 bits
Score difference with first non-orthologous sequence - C.immitis:71 P.ramorum:12

J3KI21              	100.00%		H3HBW7              	100.00%
Bootstrap support for J3KI21 as seed ortholog is 97%.
Bootstrap support for H3HBW7 as seed ortholog is 45%.
Alternative seed ortholog is H3GTM8 (12 bits away from this cluster)

Group of orthologs #740. Best score 266 bits
Score difference with first non-orthologous sequence - C.immitis:81 P.ramorum:58

J3KBM4              	100.00%		H3GXW8              	100.00%
                    	       		H3G7D1              	8.32%
Bootstrap support for J3KBM4 as seed ortholog is 96%.
Bootstrap support for H3GXW8 as seed ortholog is 96%.

Group of orthologs #741. Best score 266 bits
Score difference with first non-orthologous sequence - C.immitis:266 P.ramorum:266

J3K3R0              	100.00%		H3GD17              	100.00%
Bootstrap support for J3K3R0 as seed ortholog is 100%.
Bootstrap support for H3GD17 as seed ortholog is 100%.

Group of orthologs #742. Best score 266 bits
Score difference with first non-orthologous sequence - C.immitis:41 P.ramorum:266

J3K1P5              	100.00%		H3GKT2              	100.00%
Bootstrap support for J3K1P5 as seed ortholog is 77%.
Bootstrap support for H3GKT2 as seed ortholog is 100%.

Group of orthologs #743. Best score 266 bits
Score difference with first non-orthologous sequence - C.immitis:266 P.ramorum:266

J3KEJ7              	100.00%		H3G9N0              	100.00%
Bootstrap support for J3KEJ7 as seed ortholog is 100%.
Bootstrap support for H3G9N0 as seed ortholog is 100%.

Group of orthologs #744. Best score 266 bits
Score difference with first non-orthologous sequence - C.immitis:76 P.ramorum:86

Q1EBK0              	100.00%		H3G7M1              	100.00%
Bootstrap support for Q1EBK0 as seed ortholog is 97%.
Bootstrap support for H3G7M1 as seed ortholog is 96%.

Group of orthologs #745. Best score 265 bits
Score difference with first non-orthologous sequence - C.immitis:265 P.ramorum:265

J3KJQ9              	100.00%		H3GWA6              	100.00%
J3KBW9              	32.82%		
Bootstrap support for J3KJQ9 as seed ortholog is 100%.
Bootstrap support for H3GWA6 as seed ortholog is 100%.

Group of orthologs #746. Best score 265 bits
Score difference with first non-orthologous sequence - C.immitis:265 P.ramorum:202

J3K152              	100.00%		H3GAJ0              	100.00%
Bootstrap support for J3K152 as seed ortholog is 100%.
Bootstrap support for H3GAJ0 as seed ortholog is 100%.

Group of orthologs #747. Best score 265 bits
Score difference with first non-orthologous sequence - C.immitis:265 P.ramorum:161

J3KDA6              	100.00%		H3G955              	100.00%
Bootstrap support for J3KDA6 as seed ortholog is 100%.
Bootstrap support for H3G955 as seed ortholog is 100%.

Group of orthologs #748. Best score 265 bits
Score difference with first non-orthologous sequence - C.immitis:179 P.ramorum:265

Q1DN93              	100.00%		H3GHI8              	100.00%
Bootstrap support for Q1DN93 as seed ortholog is 99%.
Bootstrap support for H3GHI8 as seed ortholog is 100%.

Group of orthologs #749. Best score 264 bits
Score difference with first non-orthologous sequence - C.immitis:264 P.ramorum:264

J3K7Y4              	100.00%		H3GB12              	100.00%
                    	       		H3G596              	85.51%
Bootstrap support for J3K7Y4 as seed ortholog is 100%.
Bootstrap support for H3GB12 as seed ortholog is 100%.

Group of orthologs #750. Best score 263 bits
Score difference with first non-orthologous sequence - C.immitis:263 P.ramorum:263

J3K070              	100.00%		H3G725              	100.00%
Bootstrap support for J3K070 as seed ortholog is 100%.
Bootstrap support for H3G725 as seed ortholog is 100%.

Group of orthologs #751. Best score 263 bits
Score difference with first non-orthologous sequence - C.immitis:66 P.ramorum:39

J3K504              	100.00%		H3G866              	100.00%
Bootstrap support for J3K504 as seed ortholog is 97%.
Bootstrap support for H3G866 as seed ortholog is 81%.

Group of orthologs #752. Best score 263 bits
Score difference with first non-orthologous sequence - C.immitis:263 P.ramorum:263

J3K8F7              	100.00%		H3G601              	100.00%
Bootstrap support for J3K8F7 as seed ortholog is 100%.
Bootstrap support for H3G601 as seed ortholog is 100%.

Group of orthologs #753. Best score 262 bits
Score difference with first non-orthologous sequence - C.immitis:262 P.ramorum:119

I9NPU1              	100.00%		H3G892              	100.00%
J3KI66              	11.04%		H3G9C1              	51.28%
Bootstrap support for I9NPU1 as seed ortholog is 100%.
Bootstrap support for H3G892 as seed ortholog is 99%.

Group of orthologs #754. Best score 262 bits
Score difference with first non-orthologous sequence - C.immitis:262 P.ramorum:262

I9NPA4              	100.00%		H3G4X4              	100.00%
Bootstrap support for I9NPA4 as seed ortholog is 100%.
Bootstrap support for H3G4X4 as seed ortholog is 100%.

Group of orthologs #755. Best score 262 bits
Score difference with first non-orthologous sequence - C.immitis:262 P.ramorum:262

I9NQC0              	100.00%		H3GA06              	100.00%
Bootstrap support for I9NQC0 as seed ortholog is 100%.
Bootstrap support for H3GA06 as seed ortholog is 100%.

Group of orthologs #756. Best score 262 bits
Score difference with first non-orthologous sequence - C.immitis:34 P.ramorum:73

J3K425              	100.00%		H3G9Y3              	100.00%
Bootstrap support for J3K425 as seed ortholog is 83%.
Bootstrap support for H3G9Y3 as seed ortholog is 98%.

Group of orthologs #757. Best score 262 bits
Score difference with first non-orthologous sequence - C.immitis:262 P.ramorum:262

J3K862              	100.00%		H3G763              	100.00%
Bootstrap support for J3K862 as seed ortholog is 100%.
Bootstrap support for H3G763 as seed ortholog is 100%.

Group of orthologs #758. Best score 262 bits
Score difference with first non-orthologous sequence - C.immitis:262 P.ramorum:262

J3KCK1              	100.00%		H3G8T9              	100.00%
Bootstrap support for J3KCK1 as seed ortholog is 100%.
Bootstrap support for H3G8T9 as seed ortholog is 100%.

Group of orthologs #759. Best score 262 bits
Score difference with first non-orthologous sequence - C.immitis:157 P.ramorum:262

J3KFB7              	100.00%		H3G7I0              	100.00%
Bootstrap support for J3KFB7 as seed ortholog is 100%.
Bootstrap support for H3G7I0 as seed ortholog is 100%.

Group of orthologs #760. Best score 262 bits
Score difference with first non-orthologous sequence - C.immitis:143 P.ramorum:108

J3KLP2              	100.00%		H3G9K1              	100.00%
Bootstrap support for J3KLP2 as seed ortholog is 100%.
Bootstrap support for H3G9K1 as seed ortholog is 100%.

Group of orthologs #761. Best score 261 bits
Score difference with first non-orthologous sequence - C.immitis:44 P.ramorum:91

I9XLZ7              	100.00%		H3H2J9              	100.00%
J3K0N1              	100.00%		H3G582              	100.00%
                    	       		H3G579              	57.46%
                    	       		H3H2L1              	54.80%
Bootstrap support for I9XLZ7 as seed ortholog is 75%.
Bootstrap support for J3K0N1 as seed ortholog is 44%.
Alternative seed ortholog is J3KDV0 (44 bits away from this cluster)
Bootstrap support for H3H2J9 as seed ortholog is 96%.
Bootstrap support for H3G582 as seed ortholog is 88%.

Group of orthologs #762. Best score 261 bits
Score difference with first non-orthologous sequence - C.immitis:261 P.ramorum:261

J3K883              	100.00%		H3GGA8              	100.00%
                    	       		H3GGD0              	91.92%
                    	       		H3GGE5              	75.56%
Bootstrap support for J3K883 as seed ortholog is 100%.
Bootstrap support for H3GGA8 as seed ortholog is 100%.

Group of orthologs #763. Best score 261 bits
Score difference with first non-orthologous sequence - C.immitis:261 P.ramorum:261

J3KA43              	100.00%		H3GAM0              	100.00%
Bootstrap support for J3KA43 as seed ortholog is 100%.
Bootstrap support for H3GAM0 as seed ortholog is 100%.

Group of orthologs #764. Best score 261 bits
Score difference with first non-orthologous sequence - C.immitis:261 P.ramorum:261

Q1DQZ5              	100.00%		H3G8F2              	100.00%
Bootstrap support for Q1DQZ5 as seed ortholog is 100%.
Bootstrap support for H3G8F2 as seed ortholog is 100%.

Group of orthologs #765. Best score 261 bits
Score difference with first non-orthologous sequence - C.immitis:261 P.ramorum:261

Q1E5B0              	100.00%		H3GUH2              	100.00%
Bootstrap support for Q1E5B0 as seed ortholog is 100%.
Bootstrap support for H3GUH2 as seed ortholog is 100%.

Group of orthologs #766. Best score 261 bits
Score difference with first non-orthologous sequence - C.immitis:261 P.ramorum:261

J3K6D8              	100.00%		H3HB59              	100.00%
Bootstrap support for J3K6D8 as seed ortholog is 100%.
Bootstrap support for H3HB59 as seed ortholog is 100%.

Group of orthologs #767. Best score 260 bits
Score difference with first non-orthologous sequence - C.immitis:170 P.ramorum:132

J3K2K5              	100.00%		H3G9D1              	100.00%
Bootstrap support for J3K2K5 as seed ortholog is 100%.
Bootstrap support for H3G9D1 as seed ortholog is 100%.

Group of orthologs #768. Best score 260 bits
Score difference with first non-orthologous sequence - C.immitis:260 P.ramorum:260

J3K8Y4              	100.00%		H3G797              	100.00%
Bootstrap support for J3K8Y4 as seed ortholog is 100%.
Bootstrap support for H3G797 as seed ortholog is 100%.

Group of orthologs #769. Best score 259 bits
Score difference with first non-orthologous sequence - C.immitis:259 P.ramorum:259

J3KKR2              	100.00%		H3H082              	100.00%
Bootstrap support for J3KKR2 as seed ortholog is 100%.
Bootstrap support for H3H082 as seed ortholog is 100%.

Group of orthologs #770. Best score 258 bits
Score difference with first non-orthologous sequence - C.immitis:84 P.ramorum:90

J0HGR0              	100.00%		H3G853              	100.00%
Bootstrap support for J0HGR0 as seed ortholog is 96%.
Bootstrap support for H3G853 as seed ortholog is 99%.

Group of orthologs #771. Best score 258 bits
Score difference with first non-orthologous sequence - C.immitis:258 P.ramorum:258

J3K5K4              	100.00%		H3GH86              	100.00%
Bootstrap support for J3K5K4 as seed ortholog is 100%.
Bootstrap support for H3GH86 as seed ortholog is 100%.

Group of orthologs #772. Best score 257 bits
Score difference with first non-orthologous sequence - C.immitis:257 P.ramorum:257

J3KM19              	100.00%		H3G561              	100.00%
Bootstrap support for J3KM19 as seed ortholog is 100%.
Bootstrap support for H3G561 as seed ortholog is 100%.

Group of orthologs #773. Best score 257 bits
Score difference with first non-orthologous sequence - C.immitis:127 P.ramorum:65

J3K3L1              	100.00%		H3GTG5              	100.00%
Bootstrap support for J3K3L1 as seed ortholog is 99%.
Bootstrap support for H3GTG5 as seed ortholog is 91%.

Group of orthologs #774. Best score 256 bits
Score difference with first non-orthologous sequence - C.immitis:152 P.ramorum:185

J3K1F9              	100.00%		H3G6T6              	100.00%
Bootstrap support for J3K1F9 as seed ortholog is 99%.
Bootstrap support for H3G6T6 as seed ortholog is 99%.

Group of orthologs #775. Best score 256 bits
Score difference with first non-orthologous sequence - C.immitis:256 P.ramorum:256

J3KG18              	100.00%		H3G8G2              	100.00%
Bootstrap support for J3KG18 as seed ortholog is 100%.
Bootstrap support for H3G8G2 as seed ortholog is 100%.

Group of orthologs #776. Best score 256 bits
Score difference with first non-orthologous sequence - C.immitis:256 P.ramorum:195

J3K4D1              	100.00%		H3GM85              	100.00%
Bootstrap support for J3K4D1 as seed ortholog is 100%.
Bootstrap support for H3GM85 as seed ortholog is 100%.

Group of orthologs #777. Best score 256 bits
Score difference with first non-orthologous sequence - C.immitis:256 P.ramorum:154

J3KIC0              	100.00%		H3HCX5              	100.00%
Bootstrap support for J3KIC0 as seed ortholog is 100%.
Bootstrap support for H3HCX5 as seed ortholog is 99%.

Group of orthologs #778. Best score 255 bits
Score difference with first non-orthologous sequence - C.immitis:255 P.ramorum:255

J3KGC6              	100.00%		H3H0N2              	100.00%
                    	       		H3GYC2              	94.81%
                    	       		H3H0N1              	69.15%
                    	       		H3H8Q8              	43.19%
                    	       		H3GYC3              	39.28%
Bootstrap support for J3KGC6 as seed ortholog is 100%.
Bootstrap support for H3H0N2 as seed ortholog is 100%.

Group of orthologs #779. Best score 255 bits
Score difference with first non-orthologous sequence - C.immitis:52 P.ramorum:98

J3KK83              	100.00%		H3G7X2              	100.00%
J3K2U0              	13.81%		
J3K359              	10.88%		
Bootstrap support for J3KK83 as seed ortholog is 56%.
Alternative seed ortholog is J3KBB7 (52 bits away from this cluster)
Bootstrap support for H3G7X2 as seed ortholog is 87%.

Group of orthologs #780. Best score 255 bits
Score difference with first non-orthologous sequence - C.immitis:255 P.ramorum:255

J3K1B1              	100.00%		H3GE42              	100.00%
Bootstrap support for J3K1B1 as seed ortholog is 100%.
Bootstrap support for H3GE42 as seed ortholog is 100%.

Group of orthologs #781. Best score 254 bits
Score difference with first non-orthologous sequence - C.immitis:254 P.ramorum:254

J3KL55              	100.00%		H3G9U8              	100.00%
                    	       		H3G9U5              	53.24%
Bootstrap support for J3KL55 as seed ortholog is 100%.
Bootstrap support for H3G9U8 as seed ortholog is 100%.

Group of orthologs #782. Best score 254 bits
Score difference with first non-orthologous sequence - C.immitis:254 P.ramorum:254

J3KAM0              	100.00%		H3GXW5              	100.00%
                    	       		H3GXX2              	16.62%
Bootstrap support for J3KAM0 as seed ortholog is 100%.
Bootstrap support for H3GXW5 as seed ortholog is 100%.

Group of orthologs #783. Best score 254 bits
Score difference with first non-orthologous sequence - C.immitis:141 P.ramorum:21

J3K6A7              	100.00%		H3G925              	100.00%
Bootstrap support for J3K6A7 as seed ortholog is 100%.
Bootstrap support for H3G925 as seed ortholog is 84%.

Group of orthologs #784. Best score 254 bits
Score difference with first non-orthologous sequence - C.immitis:254 P.ramorum:254

J3KA72              	100.00%		H3G7C2              	100.00%
Bootstrap support for J3KA72 as seed ortholog is 100%.
Bootstrap support for H3G7C2 as seed ortholog is 100%.

Group of orthologs #785. Best score 254 bits
Score difference with first non-orthologous sequence - C.immitis:254 P.ramorum:254

J3K9B3              	100.00%		H3GWU9              	100.00%
Bootstrap support for J3K9B3 as seed ortholog is 100%.
Bootstrap support for H3GWU9 as seed ortholog is 100%.

Group of orthologs #786. Best score 253 bits
Score difference with first non-orthologous sequence - C.immitis:253 P.ramorum:253

J3K1U8              	100.00%		H3GAJ1              	100.00%
J3KAZ1              	100.00%		
J3KLU8              	11.83%		
J3KDA7              	9.75%		
Bootstrap support for J3K1U8 as seed ortholog is 100%.
Bootstrap support for J3KAZ1 as seed ortholog is 100%.
Bootstrap support for H3GAJ1 as seed ortholog is 100%.

Group of orthologs #787. Best score 253 bits
Score difference with first non-orthologous sequence - C.immitis:253 P.ramorum:183

J3K7R6              	100.00%		H3GAI3              	100.00%
Bootstrap support for J3K7R6 as seed ortholog is 100%.
Bootstrap support for H3GAI3 as seed ortholog is 100%.

Group of orthologs #788. Best score 253 bits
Score difference with first non-orthologous sequence - C.immitis:253 P.ramorum:253

J3K7F0              	100.00%		H3GGZ4              	100.00%
Bootstrap support for J3K7F0 as seed ortholog is 100%.
Bootstrap support for H3GGZ4 as seed ortholog is 100%.

Group of orthologs #789. Best score 253 bits
Score difference with first non-orthologous sequence - C.immitis:253 P.ramorum:253

J3KK16              	100.00%		H3G5N0              	100.00%
Bootstrap support for J3KK16 as seed ortholog is 100%.
Bootstrap support for H3G5N0 as seed ortholog is 100%.

Group of orthologs #790. Best score 253 bits
Score difference with first non-orthologous sequence - C.immitis:253 P.ramorum:253

Q1DKJ3              	100.00%		H3GM26              	100.00%
Bootstrap support for Q1DKJ3 as seed ortholog is 100%.
Bootstrap support for H3GM26 as seed ortholog is 100%.

Group of orthologs #791. Best score 253 bits
Score difference with first non-orthologous sequence - C.immitis:253 P.ramorum:253

J0HH32              	100.00%		H3HCF7              	100.00%
Bootstrap support for J0HH32 as seed ortholog is 100%.
Bootstrap support for H3HCF7 as seed ortholog is 100%.

Group of orthologs #792. Best score 252 bits
Score difference with first non-orthologous sequence - C.immitis:252 P.ramorum:252

J3KGW7              	100.00%		H3G8V6              	100.00%
Bootstrap support for J3KGW7 as seed ortholog is 100%.
Bootstrap support for H3G8V6 as seed ortholog is 100%.

Group of orthologs #793. Best score 252 bits
Score difference with first non-orthologous sequence - C.immitis:142 P.ramorum:103

J3KGL8              	100.00%		H3HDG0              	100.00%
Bootstrap support for J3KGL8 as seed ortholog is 100%.
Bootstrap support for H3HDG0 as seed ortholog is 100%.

Group of orthologs #794. Best score 251 bits
Score difference with first non-orthologous sequence - C.immitis:71 P.ramorum:127

Q1E306              	100.00%		H3G669              	100.00%
Bootstrap support for Q1E306 as seed ortholog is 92%.
Bootstrap support for H3G669 as seed ortholog is 99%.

Group of orthologs #795. Best score 251 bits
Score difference with first non-orthologous sequence - C.immitis:194 P.ramorum:251

I9NQ79              	100.00%		H3GZH0              	100.00%
Bootstrap support for I9NQ79 as seed ortholog is 100%.
Bootstrap support for H3GZH0 as seed ortholog is 100%.

Group of orthologs #796. Best score 251 bits
Score difference with first non-orthologous sequence - C.immitis:251 P.ramorum:251

J3K944              	100.00%		H3GXH4              	100.00%
Bootstrap support for J3K944 as seed ortholog is 100%.
Bootstrap support for H3GXH4 as seed ortholog is 100%.

Group of orthologs #797. Best score 251 bits
Score difference with first non-orthologous sequence - C.immitis:251 P.ramorum:251

J3KKP2              	100.00%		H3HA42              	100.00%
Bootstrap support for J3KKP2 as seed ortholog is 100%.
Bootstrap support for H3HA42 as seed ortholog is 100%.

Group of orthologs #798. Best score 250 bits
Score difference with first non-orthologous sequence - C.immitis:82 P.ramorum:67

J3K3W2              	100.00%		H3G775              	100.00%
                    	       		H3G697              	25.15%
                    	       		H3G698              	24.85%
Bootstrap support for J3K3W2 as seed ortholog is 93%.
Bootstrap support for H3G775 as seed ortholog is 90%.

Group of orthologs #799. Best score 250 bits
Score difference with first non-orthologous sequence - C.immitis:250 P.ramorum:250

J3K0N3              	100.00%		H3GA55              	100.00%
Bootstrap support for J3K0N3 as seed ortholog is 100%.
Bootstrap support for H3GA55 as seed ortholog is 100%.

Group of orthologs #800. Best score 250 bits
Score difference with first non-orthologous sequence - C.immitis:250 P.ramorum:250

J3KET7              	100.00%		H3GET8              	100.00%
Bootstrap support for J3KET7 as seed ortholog is 100%.
Bootstrap support for H3GET8 as seed ortholog is 100%.

Group of orthologs #801. Best score 250 bits
Score difference with first non-orthologous sequence - C.immitis:250 P.ramorum:250

J3KBN9              	100.00%		H3GV85              	100.00%
Bootstrap support for J3KBN9 as seed ortholog is 100%.
Bootstrap support for H3GV85 as seed ortholog is 100%.

Group of orthologs #802. Best score 249 bits
Score difference with first non-orthologous sequence - C.immitis:125 P.ramorum:117

J3KAG8              	100.00%		H3G8V3              	100.00%
Bootstrap support for J3KAG8 as seed ortholog is 99%.
Bootstrap support for H3G8V3 as seed ortholog is 99%.

Group of orthologs #803. Best score 249 bits
Score difference with first non-orthologous sequence - C.immitis:249 P.ramorum:100

J3KJ61              	100.00%		H3GIS2              	100.00%
Bootstrap support for J3KJ61 as seed ortholog is 100%.
Bootstrap support for H3GIS2 as seed ortholog is 99%.

Group of orthologs #804. Best score 249 bits
Score difference with first non-orthologous sequence - C.immitis:249 P.ramorum:249

J3KIJ6              	100.00%		H3GNU1              	100.00%
Bootstrap support for J3KIJ6 as seed ortholog is 100%.
Bootstrap support for H3GNU1 as seed ortholog is 100%.

Group of orthologs #805. Best score 248 bits
Score difference with first non-orthologous sequence - C.immitis:100 P.ramorum:107

J3K7M8              	100.00%		H3GA13              	100.00%
                    	       		H3HAB9              	71.37%
Bootstrap support for J3K7M8 as seed ortholog is 97%.
Bootstrap support for H3GA13 as seed ortholog is 97%.

Group of orthologs #806. Best score 248 bits
Score difference with first non-orthologous sequence - C.immitis:248 P.ramorum:248

J3KBL0              	100.00%		H3G895              	100.00%
Bootstrap support for J3KBL0 as seed ortholog is 100%.
Bootstrap support for H3G895 as seed ortholog is 100%.

Group of orthologs #807. Best score 247 bits
Score difference with first non-orthologous sequence - C.immitis:147 P.ramorum:50

J3KK84              	100.00%		H3GAJ5              	100.00%
                    	       		H3H1C9              	64.90%
                    	       		H3GB81              	52.94%
                    	       		H3G9B6              	52.18%
                    	       		H3G9B4              	49.34%
                    	       		H3GB00              	44.40%
                    	       		H3G9P4              	43.64%
                    	       		H3GAI6              	42.50%
                    	       		H3G8H3              	39.47%
                    	       		H3G7J7              	30.74%
                    	       		H3GAP7              	7.97%
                    	       		H3H151              	7.59%
                    	       		H3G622              	7.21%
                    	       		H3G5T7              	5.12%
Bootstrap support for J3KK84 as seed ortholog is 99%.
Bootstrap support for H3GAJ5 as seed ortholog is 85%.

Group of orthologs #808. Best score 247 bits
Score difference with first non-orthologous sequence - C.immitis:247 P.ramorum:247

J0HFV4              	100.00%		H3GG58              	100.00%
Bootstrap support for J0HFV4 as seed ortholog is 100%.
Bootstrap support for H3GG58 as seed ortholog is 100%.

Group of orthologs #809. Best score 247 bits
Score difference with first non-orthologous sequence - C.immitis:247 P.ramorum:247

J3K9Y1              	100.00%		H3G9E0              	100.00%
Bootstrap support for J3K9Y1 as seed ortholog is 100%.
Bootstrap support for H3G9E0 as seed ortholog is 100%.

Group of orthologs #810. Best score 247 bits
Score difference with first non-orthologous sequence - C.immitis:247 P.ramorum:247

J3K356              	100.00%		H3GRM8              	100.00%
Bootstrap support for J3K356 as seed ortholog is 100%.
Bootstrap support for H3GRM8 as seed ortholog is 100%.

Group of orthologs #811. Best score 247 bits
Score difference with first non-orthologous sequence - C.immitis:247 P.ramorum:247

J3KGL6              	100.00%		H3GPE8              	100.00%
Bootstrap support for J3KGL6 as seed ortholog is 100%.
Bootstrap support for H3GPE8 as seed ortholog is 100%.

Group of orthologs #812. Best score 246 bits
Score difference with first non-orthologous sequence - C.immitis:246 P.ramorum:246

J3KAG5              	100.00%		H3G6M0              	100.00%
Bootstrap support for J3KAG5 as seed ortholog is 100%.
Bootstrap support for H3G6M0 as seed ortholog is 100%.

Group of orthologs #813. Best score 246 bits
Score difference with first non-orthologous sequence - C.immitis:246 P.ramorum:156

J3K8C0              	100.00%		H3GD00              	100.00%
Bootstrap support for J3K8C0 as seed ortholog is 100%.
Bootstrap support for H3GD00 as seed ortholog is 98%.

Group of orthologs #814. Best score 246 bits
Score difference with first non-orthologous sequence - C.immitis:246 P.ramorum:93

J3KJT1              	100.00%		H3G7G0              	100.00%
Bootstrap support for J3KJT1 as seed ortholog is 100%.
Bootstrap support for H3G7G0 as seed ortholog is 99%.

Group of orthologs #815. Best score 245 bits
Score difference with first non-orthologous sequence - C.immitis:76 P.ramorum:245

J3KAU0              	100.00%		H3G9I6              	100.00%
J3K681              	26.87%		
Bootstrap support for J3KAU0 as seed ortholog is 97%.
Bootstrap support for H3G9I6 as seed ortholog is 100%.

Group of orthologs #816. Best score 245 bits
Score difference with first non-orthologous sequence - C.immitis:90 P.ramorum:129

J0HEY2              	100.00%		H3G9K8              	100.00%
Bootstrap support for J0HEY2 as seed ortholog is 100%.
Bootstrap support for H3G9K8 as seed ortholog is 100%.

Group of orthologs #817. Best score 245 bits
Score difference with first non-orthologous sequence - C.immitis:245 P.ramorum:245

J3K7U3              	100.00%		H3GAL6              	100.00%
Bootstrap support for J3K7U3 as seed ortholog is 100%.
Bootstrap support for H3GAL6 as seed ortholog is 100%.

Group of orthologs #818. Best score 245 bits
Score difference with first non-orthologous sequence - C.immitis:245 P.ramorum:245

J3KJ52              	100.00%		H3GC34              	100.00%
Bootstrap support for J3KJ52 as seed ortholog is 100%.
Bootstrap support for H3GC34 as seed ortholog is 100%.

Group of orthologs #819. Best score 245 bits
Score difference with first non-orthologous sequence - C.immitis:245 P.ramorum:245

J3K7P1              	100.00%		H3H115              	100.00%
Bootstrap support for J3K7P1 as seed ortholog is 100%.
Bootstrap support for H3H115 as seed ortholog is 100%.

Group of orthologs #820. Best score 244 bits
Score difference with first non-orthologous sequence - C.immitis:244 P.ramorum:244

J3K0F7              	100.00%		H3G8C7              	100.00%
Bootstrap support for J3K0F7 as seed ortholog is 100%.
Bootstrap support for H3G8C7 as seed ortholog is 100%.

Group of orthologs #821. Best score 244 bits
Score difference with first non-orthologous sequence - C.immitis:244 P.ramorum:244

J3K9K7              	100.00%		H3GNT4              	100.00%
Bootstrap support for J3K9K7 as seed ortholog is 100%.
Bootstrap support for H3GNT4 as seed ortholog is 100%.

Group of orthologs #822. Best score 244 bits
Score difference with first non-orthologous sequence - C.immitis:244 P.ramorum:31

J3K1C9              	100.00%		H3GZX9              	100.00%
Bootstrap support for J3K1C9 as seed ortholog is 100%.
Bootstrap support for H3GZX9 as seed ortholog is 86%.

Group of orthologs #823. Best score 243 bits
Score difference with first non-orthologous sequence - C.immitis:243 P.ramorum:243

J3KDJ8              	100.00%		H3G793              	100.00%
J3K182              	15.70%		
Bootstrap support for J3KDJ8 as seed ortholog is 100%.
Bootstrap support for H3G793 as seed ortholog is 100%.

Group of orthologs #824. Best score 243 bits
Score difference with first non-orthologous sequence - C.immitis:154 P.ramorum:137

I9NRN9              	100.00%		H3G8B2              	100.00%
Bootstrap support for I9NRN9 as seed ortholog is 100%.
Bootstrap support for H3G8B2 as seed ortholog is 100%.

Group of orthologs #825. Best score 243 bits
Score difference with first non-orthologous sequence - C.immitis:243 P.ramorum:189

J3K6A2              	100.00%		H3G5E0              	100.00%
Bootstrap support for J3K6A2 as seed ortholog is 100%.
Bootstrap support for H3G5E0 as seed ortholog is 100%.

Group of orthologs #826. Best score 243 bits
Score difference with first non-orthologous sequence - C.immitis:243 P.ramorum:243

J3KEH9              	100.00%		H3G9F0              	100.00%
Bootstrap support for J3KEH9 as seed ortholog is 100%.
Bootstrap support for H3G9F0 as seed ortholog is 100%.

Group of orthologs #827. Best score 243 bits
Score difference with first non-orthologous sequence - C.immitis:243 P.ramorum:243

J3K7S9              	100.00%		H3GGT2              	100.00%
Bootstrap support for J3K7S9 as seed ortholog is 100%.
Bootstrap support for H3GGT2 as seed ortholog is 100%.

Group of orthologs #828. Best score 243 bits
Score difference with first non-orthologous sequence - C.immitis:243 P.ramorum:186

J3K2X5              	100.00%		H3GS12              	100.00%
Bootstrap support for J3K2X5 as seed ortholog is 100%.
Bootstrap support for H3GS12 as seed ortholog is 98%.

Group of orthologs #829. Best score 243 bits
Score difference with first non-orthologous sequence - C.immitis:243 P.ramorum:243

J3KFA1              	100.00%		H3GJP3              	100.00%
Bootstrap support for J3KFA1 as seed ortholog is 100%.
Bootstrap support for H3GJP3 as seed ortholog is 100%.

Group of orthologs #830. Best score 243 bits
Score difference with first non-orthologous sequence - C.immitis:243 P.ramorum:243

Q1DHE1              	100.00%		H3HDH6              	100.00%
Bootstrap support for Q1DHE1 as seed ortholog is 100%.
Bootstrap support for H3HDH6 as seed ortholog is 100%.

Group of orthologs #831. Best score 242 bits
Score difference with first non-orthologous sequence - C.immitis:242 P.ramorum:109

J3K2M2              	100.00%		H3G8J0              	100.00%
Bootstrap support for J3K2M2 as seed ortholog is 100%.
Bootstrap support for H3G8J0 as seed ortholog is 99%.

Group of orthologs #832. Best score 242 bits
Score difference with first non-orthologous sequence - C.immitis:148 P.ramorum:155

J3K9A7              	100.00%		H3G9N9              	100.00%
Bootstrap support for J3K9A7 as seed ortholog is 100%.
Bootstrap support for H3G9N9 as seed ortholog is 100%.

Group of orthologs #833. Best score 242 bits
Score difference with first non-orthologous sequence - C.immitis:242 P.ramorum:242

J3KF61              	100.00%		H3G699              	100.00%
Bootstrap support for J3KF61 as seed ortholog is 100%.
Bootstrap support for H3G699 as seed ortholog is 100%.

Group of orthologs #834. Best score 242 bits
Score difference with first non-orthologous sequence - C.immitis:242 P.ramorum:242

J3K5P4              	100.00%		H3H0T8              	100.00%
Bootstrap support for J3K5P4 as seed ortholog is 100%.
Bootstrap support for H3H0T8 as seed ortholog is 100%.

Group of orthologs #835. Best score 242 bits
Score difference with first non-orthologous sequence - C.immitis:186 P.ramorum:142

J0HEF0              	100.00%		H3HAT3              	100.00%
Bootstrap support for J0HEF0 as seed ortholog is 99%.
Bootstrap support for H3HAT3 as seed ortholog is 99%.

Group of orthologs #836. Best score 242 bits
Score difference with first non-orthologous sequence - C.immitis:242 P.ramorum:242

J3KCT9              	100.00%		H3GYD8              	100.00%
Bootstrap support for J3KCT9 as seed ortholog is 100%.
Bootstrap support for H3GYD8 as seed ortholog is 100%.

Group of orthologs #837. Best score 242 bits
Score difference with first non-orthologous sequence - C.immitis:242 P.ramorum:242

J3KEF3              	100.00%		H3GY61              	100.00%
Bootstrap support for J3KEF3 as seed ortholog is 100%.
Bootstrap support for H3GY61 as seed ortholog is 100%.

Group of orthologs #838. Best score 241 bits
Score difference with first non-orthologous sequence - C.immitis:241 P.ramorum:241

J3K7Z9              	100.00%		H3GB48              	100.00%
J3KDS1              	47.04%		H3H7S5              	26.53%
Bootstrap support for J3K7Z9 as seed ortholog is 100%.
Bootstrap support for H3GB48 as seed ortholog is 100%.

Group of orthologs #839. Best score 241 bits
Score difference with first non-orthologous sequence - C.immitis:103 P.ramorum:241

Q1E225              	100.00%		H3G880              	100.00%
                    	       		H3G9N3              	50.00%
Bootstrap support for Q1E225 as seed ortholog is 100%.
Bootstrap support for H3G880 as seed ortholog is 100%.

Group of orthologs #840. Best score 241 bits
Score difference with first non-orthologous sequence - C.immitis:241 P.ramorum:241

J3K4F4              	100.00%		H3G5M2              	100.00%
Bootstrap support for J3K4F4 as seed ortholog is 100%.
Bootstrap support for H3G5M2 as seed ortholog is 100%.

Group of orthologs #841. Best score 241 bits
Score difference with first non-orthologous sequence - C.immitis:241 P.ramorum:241

J3KAS8              	100.00%		H3GQ96              	100.00%
Bootstrap support for J3KAS8 as seed ortholog is 100%.
Bootstrap support for H3GQ96 as seed ortholog is 100%.

Group of orthologs #842. Best score 240 bits
Score difference with first non-orthologous sequence - C.immitis:240 P.ramorum:240

J3KB28              	100.00%		H3GHC6              	100.00%
                    	       		H3GY47              	5.20%
Bootstrap support for J3KB28 as seed ortholog is 100%.
Bootstrap support for H3GHC6 as seed ortholog is 100%.

Group of orthologs #843. Best score 240 bits
Score difference with first non-orthologous sequence - C.immitis:240 P.ramorum:240

J3KMC0              	100.00%		H3GFJ2              	100.00%
                    	       		H3G8J1              	77.74%
Bootstrap support for J3KMC0 as seed ortholog is 100%.
Bootstrap support for H3GFJ2 as seed ortholog is 100%.

Group of orthologs #844. Best score 240 bits
Score difference with first non-orthologous sequence - C.immitis:240 P.ramorum:175

J3KKH9              	100.00%		H3HE95              	100.00%
                    	       		H3G597              	62.30%
Bootstrap support for J3KKH9 as seed ortholog is 100%.
Bootstrap support for H3HE95 as seed ortholog is 99%.

Group of orthologs #845. Best score 240 bits
Score difference with first non-orthologous sequence - C.immitis:240 P.ramorum:20

J3K9K5              	100.00%		H3GWR1              	100.00%
Bootstrap support for J3K9K5 as seed ortholog is 100%.
Bootstrap support for H3GWR1 as seed ortholog is 68%.
Alternative seed ortholog is H3H1V3 (20 bits away from this cluster)

Group of orthologs #846. Best score 239 bits
Score difference with first non-orthologous sequence - C.immitis:239 P.ramorum:239

J3KIV3              	100.00%		H3G552              	100.00%
Bootstrap support for J3KIV3 as seed ortholog is 100%.
Bootstrap support for H3G552 as seed ortholog is 100%.

Group of orthologs #847. Best score 239 bits
Score difference with first non-orthologous sequence - C.immitis:239 P.ramorum:239

J3KMD6              	100.00%		H3G8I4              	100.00%
Bootstrap support for J3KMD6 as seed ortholog is 100%.
Bootstrap support for H3G8I4 as seed ortholog is 100%.

Group of orthologs #848. Best score 239 bits
Score difference with first non-orthologous sequence - C.immitis:239 P.ramorum:239

J3KF26              	100.00%		H3GQD5              	100.00%
Bootstrap support for J3KF26 as seed ortholog is 100%.
Bootstrap support for H3GQD5 as seed ortholog is 100%.

Group of orthologs #849. Best score 239 bits
Score difference with first non-orthologous sequence - C.immitis:239 P.ramorum:61

J3KJ72              	100.00%		H3GT84              	100.00%
Bootstrap support for J3KJ72 as seed ortholog is 100%.
Bootstrap support for H3GT84 as seed ortholog is 73%.
Alternative seed ortholog is H3GAA4 (61 bits away from this cluster)

Group of orthologs #850. Best score 238 bits
Score difference with first non-orthologous sequence - C.immitis:238 P.ramorum:238

J3K6K8              	100.00%		H3GBR9              	100.00%
Bootstrap support for J3K6K8 as seed ortholog is 100%.
Bootstrap support for H3GBR9 as seed ortholog is 100%.

Group of orthologs #851. Best score 238 bits
Score difference with first non-orthologous sequence - C.immitis:238 P.ramorum:238

J3KDP9              	100.00%		H3G7S0              	100.00%
Bootstrap support for J3KDP9 as seed ortholog is 100%.
Bootstrap support for H3G7S0 as seed ortholog is 100%.

Group of orthologs #852. Best score 238 bits
Score difference with first non-orthologous sequence - C.immitis:238 P.ramorum:238

J3KCZ0              	100.00%		H3G8P0              	100.00%
Bootstrap support for J3KCZ0 as seed ortholog is 100%.
Bootstrap support for H3G8P0 as seed ortholog is 100%.

Group of orthologs #853. Best score 238 bits
Score difference with first non-orthologous sequence - C.immitis:238 P.ramorum:238

J3KJ87              	100.00%		H3GT58              	100.00%
Bootstrap support for J3KJ87 as seed ortholog is 100%.
Bootstrap support for H3GT58 as seed ortholog is 100%.

Group of orthologs #854. Best score 238 bits
Score difference with first non-orthologous sequence - C.immitis:238 P.ramorum:238

J3KF69              	100.00%		H3GXX6              	100.00%
Bootstrap support for J3KF69 as seed ortholog is 100%.
Bootstrap support for H3GXX6 as seed ortholog is 100%.

Group of orthologs #855. Best score 237 bits
Score difference with first non-orthologous sequence - C.immitis:106 P.ramorum:237

J3K4R7              	100.00%		H3G796              	100.00%
Bootstrap support for J3K4R7 as seed ortholog is 99%.
Bootstrap support for H3G796 as seed ortholog is 100%.

Group of orthologs #856. Best score 237 bits
Score difference with first non-orthologous sequence - C.immitis:237 P.ramorum:237

J3K4A4              	100.00%		H3G8A4              	100.00%
Bootstrap support for J3K4A4 as seed ortholog is 100%.
Bootstrap support for H3G8A4 as seed ortholog is 100%.

Group of orthologs #857. Best score 236 bits
Score difference with first non-orthologous sequence - C.immitis:236 P.ramorum:159

J3KD63              	100.00%		H3GQI3              	100.00%
                    	       		H3G6G9              	13.40%
                    	       		H3G560              	13.28%
                    	       		H3H5C6              	8.65%
Bootstrap support for J3KD63 as seed ortholog is 100%.
Bootstrap support for H3GQI3 as seed ortholog is 99%.

Group of orthologs #858. Best score 236 bits
Score difference with first non-orthologous sequence - C.immitis:236 P.ramorum:236

J3KD16              	100.00%		H3GC81              	100.00%
Bootstrap support for J3KD16 as seed ortholog is 100%.
Bootstrap support for H3GC81 as seed ortholog is 100%.

Group of orthologs #859. Best score 235 bits
Score difference with first non-orthologous sequence - C.immitis:235 P.ramorum:235

J3KM21              	100.00%		H3G995              	100.00%
                    	       		H3GH24              	88.92%
                    	       		H3GH23              	73.01%
Bootstrap support for J3KM21 as seed ortholog is 100%.
Bootstrap support for H3G995 as seed ortholog is 100%.

Group of orthologs #860. Best score 235 bits
Score difference with first non-orthologous sequence - C.immitis:116 P.ramorum:235

J3K3C3              	100.00%		H3GS96              	100.00%
J3K6U1              	10.14%		
Bootstrap support for J3K3C3 as seed ortholog is 99%.
Bootstrap support for H3GS96 as seed ortholog is 100%.

Group of orthologs #861. Best score 235 bits
Score difference with first non-orthologous sequence - C.immitis:85 P.ramorum:235

J3KA00              	100.00%		H3H549              	100.00%
                    	       		H3G9B3              	5.28%
Bootstrap support for J3KA00 as seed ortholog is 93%.
Bootstrap support for H3H549 as seed ortholog is 100%.

Group of orthologs #862. Best score 235 bits
Score difference with first non-orthologous sequence - C.immitis:235 P.ramorum:235

J3K3P2              	100.00%		H3G916              	100.00%
Bootstrap support for J3K3P2 as seed ortholog is 100%.
Bootstrap support for H3G916 as seed ortholog is 100%.

Group of orthologs #863. Best score 235 bits
Score difference with first non-orthologous sequence - C.immitis:235 P.ramorum:235

J3K9Q7              	100.00%		H3G884              	100.00%
Bootstrap support for J3K9Q7 as seed ortholog is 100%.
Bootstrap support for H3G884 as seed ortholog is 100%.

Group of orthologs #864. Best score 235 bits
Score difference with first non-orthologous sequence - C.immitis:158 P.ramorum:121

J3KJ14              	100.00%		H3G8W4              	100.00%
Bootstrap support for J3KJ14 as seed ortholog is 99%.
Bootstrap support for H3G8W4 as seed ortholog is 99%.

Group of orthologs #865. Best score 235 bits
Score difference with first non-orthologous sequence - C.immitis:235 P.ramorum:235

J3KHG9              	100.00%		H3GJB8              	100.00%
Bootstrap support for J3KHG9 as seed ortholog is 100%.
Bootstrap support for H3GJB8 as seed ortholog is 100%.

Group of orthologs #866. Best score 235 bits
Score difference with first non-orthologous sequence - C.immitis:235 P.ramorum:235

J3KM55              	100.00%		H3GNQ5              	100.00%
Bootstrap support for J3KM55 as seed ortholog is 100%.
Bootstrap support for H3GNQ5 as seed ortholog is 100%.

Group of orthologs #867. Best score 234 bits
Score difference with first non-orthologous sequence - C.immitis:175 P.ramorum:234

J3KAU3              	100.00%		H3GZ56              	100.00%
Bootstrap support for J3KAU3 as seed ortholog is 99%.
Bootstrap support for H3GZ56 as seed ortholog is 100%.

Group of orthologs #868. Best score 234 bits
Score difference with first non-orthologous sequence - C.immitis:234 P.ramorum:234

J3KM06              	100.00%		H3GTQ7              	100.00%
Bootstrap support for J3KM06 as seed ortholog is 100%.
Bootstrap support for H3GTQ7 as seed ortholog is 100%.

Group of orthologs #869. Best score 233 bits
Score difference with first non-orthologous sequence - C.immitis:84 P.ramorum:116

J3K428              	100.00%		H3GW41              	100.00%
                    	       		H3HB65              	18.09%
Bootstrap support for J3K428 as seed ortholog is 98%.
Bootstrap support for H3GW41 as seed ortholog is 99%.

Group of orthologs #870. Best score 233 bits
Score difference with first non-orthologous sequence - C.immitis:233 P.ramorum:152

J0HGJ5              	100.00%		H3G8V5              	100.00%
Bootstrap support for J0HGJ5 as seed ortholog is 100%.
Bootstrap support for H3G8V5 as seed ortholog is 100%.

Group of orthologs #871. Best score 233 bits
Score difference with first non-orthologous sequence - C.immitis:74 P.ramorum:233

J3KAR7              	100.00%		H3G8Q0              	100.00%
Bootstrap support for J3KAR7 as seed ortholog is 97%.
Bootstrap support for H3G8Q0 as seed ortholog is 100%.

Group of orthologs #872. Best score 233 bits
Score difference with first non-orthologous sequence - C.immitis:233 P.ramorum:233

J3KF78              	100.00%		H3G562              	100.00%
Bootstrap support for J3KF78 as seed ortholog is 100%.
Bootstrap support for H3G562 as seed ortholog is 100%.

Group of orthologs #873. Best score 233 bits
Score difference with first non-orthologous sequence - C.immitis:233 P.ramorum:172

J3KDL7              	100.00%		H3G7B7              	100.00%
Bootstrap support for J3KDL7 as seed ortholog is 100%.
Bootstrap support for H3G7B7 as seed ortholog is 100%.

Group of orthologs #874. Best score 233 bits
Score difference with first non-orthologous sequence - C.immitis:174 P.ramorum:233

J3KE45              	100.00%		H3G962              	100.00%
Bootstrap support for J3KE45 as seed ortholog is 100%.
Bootstrap support for H3G962 as seed ortholog is 100%.

Group of orthologs #875. Best score 233 bits
Score difference with first non-orthologous sequence - C.immitis:233 P.ramorum:233

J3KH33              	100.00%		H3G7B0              	100.00%
Bootstrap support for J3KH33 as seed ortholog is 100%.
Bootstrap support for H3G7B0 as seed ortholog is 100%.

Group of orthologs #876. Best score 233 bits
Score difference with first non-orthologous sequence - C.immitis:233 P.ramorum:233

J3KL90              	100.00%		H3G940              	100.00%
Bootstrap support for J3KL90 as seed ortholog is 100%.
Bootstrap support for H3G940 as seed ortholog is 100%.

Group of orthologs #877. Best score 233 bits
Score difference with first non-orthologous sequence - C.immitis:121 P.ramorum:121

J3KLH9              	100.00%		H3GM16              	100.00%
Bootstrap support for J3KLH9 as seed ortholog is 83%.
Bootstrap support for H3GM16 as seed ortholog is 82%.

Group of orthologs #878. Best score 232 bits
Score difference with first non-orthologous sequence - C.immitis:232 P.ramorum:232

J3K1A8              	100.00%		H3G701              	100.00%
                    	       		H3GSV1              	77.51%
Bootstrap support for J3K1A8 as seed ortholog is 100%.
Bootstrap support for H3G701 as seed ortholog is 100%.

Group of orthologs #879. Best score 232 bits
Score difference with first non-orthologous sequence - C.immitis:37 P.ramorum:232

J3KJK0              	100.00%		H3GAR4              	100.00%
J3KBT8              	22.19%		
Bootstrap support for J3KJK0 as seed ortholog is 88%.
Bootstrap support for H3GAR4 as seed ortholog is 100%.

Group of orthologs #880. Best score 232 bits
Score difference with first non-orthologous sequence - C.immitis:232 P.ramorum:232

J3K0B4              	100.00%		H3G9F9              	100.00%
Bootstrap support for J3K0B4 as seed ortholog is 100%.
Bootstrap support for H3G9F9 as seed ortholog is 100%.

Group of orthologs #881. Best score 232 bits
Score difference with first non-orthologous sequence - C.immitis:162 P.ramorum:36

J0HHR6              	100.00%		H3GAB0              	100.00%
Bootstrap support for J0HHR6 as seed ortholog is 100%.
Bootstrap support for H3GAB0 as seed ortholog is 90%.

Group of orthologs #882. Best score 231 bits
Score difference with first non-orthologous sequence - C.immitis:67 P.ramorum:70

J3KBE7              	100.00%		H3GJ91              	100.00%
                    	       		H3G5M5              	36.70%
Bootstrap support for J3KBE7 as seed ortholog is 92%.
Bootstrap support for H3GJ91 as seed ortholog is 92%.

Group of orthologs #883. Best score 231 bits
Score difference with first non-orthologous sequence - C.immitis:231 P.ramorum:190

J3K3D2              	100.00%		H3G8D5              	100.00%
Bootstrap support for J3K3D2 as seed ortholog is 100%.
Bootstrap support for H3G8D5 as seed ortholog is 100%.

Group of orthologs #884. Best score 230 bits
Score difference with first non-orthologous sequence - C.immitis:78 P.ramorum:76

I9XN44              	100.00%		H3GDW0              	100.00%
Bootstrap support for I9XN44 as seed ortholog is 97%.
Bootstrap support for H3GDW0 as seed ortholog is 99%.

Group of orthologs #885. Best score 230 bits
Score difference with first non-orthologous sequence - C.immitis:230 P.ramorum:230

J3KI47              	100.00%		H3G5G6              	100.00%
Bootstrap support for J3KI47 as seed ortholog is 100%.
Bootstrap support for H3G5G6 as seed ortholog is 100%.

Group of orthologs #886. Best score 230 bits
Score difference with first non-orthologous sequence - C.immitis:230 P.ramorum:183

J3KJ92              	100.00%		H3G7J2              	100.00%
Bootstrap support for J3KJ92 as seed ortholog is 100%.
Bootstrap support for H3G7J2 as seed ortholog is 100%.

Group of orthologs #887. Best score 230 bits
Score difference with first non-orthologous sequence - C.immitis:230 P.ramorum:230

Q1DHP3              	100.00%		H3GLN3              	100.00%
Bootstrap support for Q1DHP3 as seed ortholog is 100%.
Bootstrap support for H3GLN3 as seed ortholog is 100%.

Group of orthologs #888. Best score 230 bits
Score difference with first non-orthologous sequence - C.immitis:230 P.ramorum:230

J3KED6              	100.00%		H3GV90              	100.00%
Bootstrap support for J3KED6 as seed ortholog is 100%.
Bootstrap support for H3GV90 as seed ortholog is 100%.

Group of orthologs #889. Best score 229 bits
Score difference with first non-orthologous sequence - C.immitis:229 P.ramorum:152

J3K3R6              	100.00%		H3G9Y2              	100.00%
Bootstrap support for J3K3R6 as seed ortholog is 100%.
Bootstrap support for H3G9Y2 as seed ortholog is 99%.

Group of orthologs #890. Best score 229 bits
Score difference with first non-orthologous sequence - C.immitis:229 P.ramorum:229

J3K4Y8              	100.00%		H3GY66              	100.00%
Bootstrap support for J3K4Y8 as seed ortholog is 100%.
Bootstrap support for H3GY66 as seed ortholog is 100%.

Group of orthologs #891. Best score 228 bits
Score difference with first non-orthologous sequence - C.immitis:228 P.ramorum:228

J3KEP0              	100.00%		H3G7I8              	100.00%
                    	       		H3HDF4              	60.12%
                    	       		H3GA24              	52.60%
                    	       		H3GA25              	51.45%
                    	       		H3GW69              	50.87%
                    	       		H3GA56              	43.93%
                    	       		H3GA54              	25.43%
                    	       		H3GB09              	22.54%
                    	       		H3GX51              	14.45%
Bootstrap support for J3KEP0 as seed ortholog is 100%.
Bootstrap support for H3G7I8 as seed ortholog is 100%.

Group of orthologs #892. Best score 228 bits
Score difference with first non-orthologous sequence - C.immitis:228 P.ramorum:228

J3KF62              	100.00%		H3GS72              	100.00%
Bootstrap support for J3KF62 as seed ortholog is 100%.
Bootstrap support for H3GS72 as seed ortholog is 100%.

Group of orthologs #893. Best score 227 bits
Score difference with first non-orthologous sequence - C.immitis:62 P.ramorum:44

J3KBA1              	100.00%		H3GA42              	100.00%
Bootstrap support for J3KBA1 as seed ortholog is 99%.
Bootstrap support for H3GA42 as seed ortholog is 99%.

Group of orthologs #894. Best score 227 bits
Score difference with first non-orthologous sequence - C.immitis:227 P.ramorum:227

J3KLJ3              	100.00%		H3G546              	100.00%
Bootstrap support for J3KLJ3 as seed ortholog is 100%.
Bootstrap support for H3G546 as seed ortholog is 100%.

Group of orthologs #895. Best score 227 bits
Score difference with first non-orthologous sequence - C.immitis:81 P.ramorum:98

Q1E4I8              	100.00%		H3G9X0              	100.00%
Bootstrap support for Q1E4I8 as seed ortholog is 99%.
Bootstrap support for H3G9X0 as seed ortholog is 99%.

Group of orthologs #896. Best score 227 bits
Score difference with first non-orthologous sequence - C.immitis:227 P.ramorum:227

J3KH13              	100.00%		H3GGH2              	100.00%
Bootstrap support for J3KH13 as seed ortholog is 100%.
Bootstrap support for H3GGH2 as seed ortholog is 100%.

Group of orthologs #897. Best score 227 bits
Score difference with first non-orthologous sequence - C.immitis:227 P.ramorum:227

Q1DNB9              	100.00%		H3GC14              	100.00%
Bootstrap support for Q1DNB9 as seed ortholog is 100%.
Bootstrap support for H3GC14 as seed ortholog is 100%.

Group of orthologs #898. Best score 225 bits
Score difference with first non-orthologous sequence - C.immitis:85 P.ramorum:36

J3KKJ8              	100.00%		H3GVV5              	100.00%
                    	       		H3GIW2              	18.55%
                    	       		H3H4V3              	14.29%
Bootstrap support for J3KKJ8 as seed ortholog is 98%.
Bootstrap support for H3GVV5 as seed ortholog is 84%.

Group of orthologs #899. Best score 225 bits
Score difference with first non-orthologous sequence - C.immitis:225 P.ramorum:225

J3K362              	100.00%		H3GHG7              	100.00%
J3K1L2              	23.39%		
Bootstrap support for J3K362 as seed ortholog is 100%.
Bootstrap support for H3GHG7 as seed ortholog is 100%.

Group of orthologs #900. Best score 225 bits
Score difference with first non-orthologous sequence - C.immitis:225 P.ramorum:180

J3KDF4              	100.00%		H3GRT1              	100.00%
                    	       		H3H884              	100.00%
Bootstrap support for J3KDF4 as seed ortholog is 100%.
Bootstrap support for H3GRT1 as seed ortholog is 99%.
Bootstrap support for H3H884 as seed ortholog is 99%.

Group of orthologs #901. Best score 224 bits
Score difference with first non-orthologous sequence - C.immitis:224 P.ramorum:120

J3KBZ4              	100.00%		H3G745              	100.00%
Bootstrap support for J3KBZ4 as seed ortholog is 100%.
Bootstrap support for H3G745 as seed ortholog is 97%.

Group of orthologs #902. Best score 224 bits
Score difference with first non-orthologous sequence - C.immitis:224 P.ramorum:224

J3KLJ8              	100.00%		H3GZU7              	100.00%
Bootstrap support for J3KLJ8 as seed ortholog is 100%.
Bootstrap support for H3GZU7 as seed ortholog is 100%.

Group of orthologs #903. Best score 224 bits
Score difference with first non-orthologous sequence - C.immitis:224 P.ramorum:143

Q1DSY1              	100.00%		H3HE78              	100.00%
Bootstrap support for Q1DSY1 as seed ortholog is 100%.
Bootstrap support for H3HE78 as seed ortholog is 100%.

Group of orthologs #904. Best score 223 bits
Score difference with first non-orthologous sequence - C.immitis:43 P.ramorum:115

J3K8N3              	100.00%		H3GTA9              	100.00%
J3K5Y2              	12.59%		H3GTC2              	79.30%
                    	       		H3GTC3              	77.36%
                    	       		H3GAV3              	66.34%
                    	       		H3H4C4              	64.53%
                    	       		H3H7B4              	64.16%
                    	       		H3G977              	64.04%
                    	       		H3H5U5              	62.83%
                    	       		H3H3Z9              	60.29%
                    	       		H3GCR6              	50.00%
Bootstrap support for J3K8N3 as seed ortholog is 79%.
Bootstrap support for H3GTA9 as seed ortholog is 99%.

Group of orthologs #905. Best score 223 bits
Score difference with first non-orthologous sequence - C.immitis:48 P.ramorum:130

J3KKT3              	100.00%		H3GTP5              	100.00%
                    	       		H3GTQ0              	69.02%
                    	       		H3H818              	59.51%
                    	       		H3H3J2              	30.37%
Bootstrap support for J3KKT3 as seed ortholog is 92%.
Bootstrap support for H3GTP5 as seed ortholog is 100%.

Group of orthologs #906. Best score 223 bits
Score difference with first non-orthologous sequence - C.immitis:85 P.ramorum:129

J3KAF8              	100.00%		H3G8P2              	100.00%
Bootstrap support for J3KAF8 as seed ortholog is 99%.
Bootstrap support for H3G8P2 as seed ortholog is 100%.

Group of orthologs #907. Best score 223 bits
Score difference with first non-orthologous sequence - C.immitis:223 P.ramorum:223

J3K1F5              	100.00%		H3GKZ8              	100.00%
Bootstrap support for J3K1F5 as seed ortholog is 100%.
Bootstrap support for H3GKZ8 as seed ortholog is 100%.

Group of orthologs #908. Best score 223 bits
Score difference with first non-orthologous sequence - C.immitis:223 P.ramorum:223

J3KBM1              	100.00%		H3GI71              	100.00%
Bootstrap support for J3KBM1 as seed ortholog is 100%.
Bootstrap support for H3GI71 as seed ortholog is 100%.

Group of orthologs #909. Best score 222 bits
Score difference with first non-orthologous sequence - C.immitis:222 P.ramorum:113

Q1DXN1              	100.00%		H3GAR1              	100.00%
                    	       		H3G8L1              	40.00%
Bootstrap support for Q1DXN1 as seed ortholog is 100%.
Bootstrap support for H3GAR1 as seed ortholog is 99%.

Group of orthologs #910. Best score 222 bits
Score difference with first non-orthologous sequence - C.immitis:222 P.ramorum:222

J3K921              	100.00%		H3GYM7              	100.00%
                    	       		H3H0I8              	57.80%
Bootstrap support for J3K921 as seed ortholog is 100%.
Bootstrap support for H3GYM7 as seed ortholog is 100%.

Group of orthologs #911. Best score 222 bits
Score difference with first non-orthologous sequence - C.immitis:61 P.ramorum:222

Q1DXR6              	100.00%		H3GR10              	100.00%
                    	       		H3HCA6              	52.23%
Bootstrap support for Q1DXR6 as seed ortholog is 89%.
Bootstrap support for H3GR10 as seed ortholog is 100%.

Group of orthologs #912. Best score 222 bits
Score difference with first non-orthologous sequence - C.immitis:222 P.ramorum:222

I9NNT6              	100.00%		H3GJS7              	100.00%
Bootstrap support for I9NNT6 as seed ortholog is 100%.
Bootstrap support for H3GJS7 as seed ortholog is 100%.

Group of orthologs #913. Best score 222 bits
Score difference with first non-orthologous sequence - C.immitis:222 P.ramorum:222

J3K9P6              	100.00%		H3GC46              	100.00%
Bootstrap support for J3K9P6 as seed ortholog is 100%.
Bootstrap support for H3GC46 as seed ortholog is 100%.

Group of orthologs #914. Best score 222 bits
Score difference with first non-orthologous sequence - C.immitis:222 P.ramorum:222

J3KEQ2              	100.00%		H3G9D8              	100.00%
Bootstrap support for J3KEQ2 as seed ortholog is 100%.
Bootstrap support for H3G9D8 as seed ortholog is 100%.

Group of orthologs #915. Best score 222 bits
Score difference with first non-orthologous sequence - C.immitis:222 P.ramorum:142

J3KF04              	100.00%		H3GKK6              	100.00%
Bootstrap support for J3KF04 as seed ortholog is 100%.
Bootstrap support for H3GKK6 as seed ortholog is 99%.

Group of orthologs #916. Best score 221 bits
Score difference with first non-orthologous sequence - C.immitis:143 P.ramorum:221

J3K0C1              	100.00%		H3GAL1              	100.00%
Bootstrap support for J3K0C1 as seed ortholog is 99%.
Bootstrap support for H3GAL1 as seed ortholog is 100%.

Group of orthologs #917. Best score 221 bits
Score difference with first non-orthologous sequence - C.immitis:221 P.ramorum:221

J3K598              	100.00%		H3GMD4              	100.00%
Bootstrap support for J3K598 as seed ortholog is 100%.
Bootstrap support for H3GMD4 as seed ortholog is 100%.

Group of orthologs #918. Best score 221 bits
Score difference with first non-orthologous sequence - C.immitis:221 P.ramorum:221

J3K7X7              	100.00%		H3GMD2              	100.00%
Bootstrap support for J3K7X7 as seed ortholog is 100%.
Bootstrap support for H3GMD2 as seed ortholog is 100%.

Group of orthologs #919. Best score 221 bits
Score difference with first non-orthologous sequence - C.immitis:221 P.ramorum:221

J3K4Y4              	100.00%		H3H5F6              	100.00%
Bootstrap support for J3K4Y4 as seed ortholog is 100%.
Bootstrap support for H3H5F6 as seed ortholog is 100%.

Group of orthologs #920. Best score 221 bits
Score difference with first non-orthologous sequence - C.immitis:221 P.ramorum:132

J3KL68              	100.00%		H3GU85              	100.00%
Bootstrap support for J3KL68 as seed ortholog is 100%.
Bootstrap support for H3GU85 as seed ortholog is 99%.

Group of orthologs #921. Best score 221 bits
Score difference with first non-orthologous sequence - C.immitis:221 P.ramorum:221

J3KIE8              	100.00%		H3H3M7              	100.00%
Bootstrap support for J3KIE8 as seed ortholog is 100%.
Bootstrap support for H3H3M7 as seed ortholog is 100%.

Group of orthologs #922. Best score 220 bits
Score difference with first non-orthologous sequence - C.immitis:145 P.ramorum:52

J3K3H9              	100.00%		H3GFH2              	100.00%
Bootstrap support for J3K3H9 as seed ortholog is 99%.
Bootstrap support for H3GFH2 as seed ortholog is 90%.

Group of orthologs #923. Best score 220 bits
Score difference with first non-orthologous sequence - C.immitis:153 P.ramorum:80

J3KFM8              	100.00%		H3G969              	100.00%
Bootstrap support for J3KFM8 as seed ortholog is 100%.
Bootstrap support for H3G969 as seed ortholog is 99%.

Group of orthologs #924. Best score 219 bits
Score difference with first non-orthologous sequence - C.immitis:219 P.ramorum:219

J3K1X4              	100.00%		H3G6M9              	100.00%
Bootstrap support for J3K1X4 as seed ortholog is 100%.
Bootstrap support for H3G6M9 as seed ortholog is 100%.

Group of orthologs #925. Best score 219 bits
Score difference with first non-orthologous sequence - C.immitis:219 P.ramorum:219

J3KCD9              	100.00%		H3G5S1              	100.00%
Bootstrap support for J3KCD9 as seed ortholog is 100%.
Bootstrap support for H3G5S1 as seed ortholog is 100%.

Group of orthologs #926. Best score 219 bits
Score difference with first non-orthologous sequence - C.immitis:56 P.ramorum:122

J3K3S3              	100.00%		H3GSF0              	100.00%
Bootstrap support for J3K3S3 as seed ortholog is 95%.
Bootstrap support for H3GSF0 as seed ortholog is 99%.

Group of orthologs #927. Best score 219 bits
Score difference with first non-orthologous sequence - C.immitis:219 P.ramorum:219

J3KL87              	100.00%		H3HD26              	100.00%
Bootstrap support for J3KL87 as seed ortholog is 100%.
Bootstrap support for H3HD26 as seed ortholog is 100%.

Group of orthologs #928. Best score 218 bits
Score difference with first non-orthologous sequence - C.immitis:165 P.ramorum:108

J3K3F0              	100.00%		H3GAF7              	100.00%
Bootstrap support for J3K3F0 as seed ortholog is 100%.
Bootstrap support for H3GAF7 as seed ortholog is 99%.

Group of orthologs #929. Best score 218 bits
Score difference with first non-orthologous sequence - C.immitis:218 P.ramorum:218

J3KCM0              	100.00%		H3G8D4              	100.00%
Bootstrap support for J3KCM0 as seed ortholog is 100%.
Bootstrap support for H3G8D4 as seed ortholog is 100%.

Group of orthologs #930. Best score 218 bits
Score difference with first non-orthologous sequence - C.immitis:27 P.ramorum:40

J3KDP0              	100.00%		H3G9M4              	100.00%
Bootstrap support for J3KDP0 as seed ortholog is 90%.
Bootstrap support for H3G9M4 as seed ortholog is 96%.

Group of orthologs #931. Best score 218 bits
Score difference with first non-orthologous sequence - C.immitis:218 P.ramorum:218

J3K138              	100.00%		H3GSX0              	100.00%
Bootstrap support for J3K138 as seed ortholog is 100%.
Bootstrap support for H3GSX0 as seed ortholog is 100%.

Group of orthologs #932. Best score 218 bits
Score difference with first non-orthologous sequence - C.immitis:218 P.ramorum:218

Q1E6M1              	100.00%		H3G8N7              	100.00%
Bootstrap support for Q1E6M1 as seed ortholog is 100%.
Bootstrap support for H3G8N7 as seed ortholog is 100%.

Group of orthologs #933. Best score 218 bits
Score difference with first non-orthologous sequence - C.immitis:218 P.ramorum:218

J3K6H4              	100.00%		H3GUR6              	100.00%
Bootstrap support for J3K6H4 as seed ortholog is 100%.
Bootstrap support for H3GUR6 as seed ortholog is 100%.

Group of orthologs #934. Best score 218 bits
Score difference with first non-orthologous sequence - C.immitis:119 P.ramorum:218

J3KE73              	100.00%		H3GMT2              	100.00%
Bootstrap support for J3KE73 as seed ortholog is 99%.
Bootstrap support for H3GMT2 as seed ortholog is 100%.

Group of orthologs #935. Best score 217 bits
Score difference with first non-orthologous sequence - C.immitis:217 P.ramorum:217

J3K243              	100.00%		H3GV33              	100.00%
                    	       		H3GV30              	70.05%
Bootstrap support for J3K243 as seed ortholog is 100%.
Bootstrap support for H3GV33 as seed ortholog is 100%.

Group of orthologs #936. Best score 217 bits
Score difference with first non-orthologous sequence - C.immitis:217 P.ramorum:217

J3K3R2              	100.00%		H3G9D2              	100.00%
Bootstrap support for J3K3R2 as seed ortholog is 100%.
Bootstrap support for H3G9D2 as seed ortholog is 100%.

Group of orthologs #937. Best score 217 bits
Score difference with first non-orthologous sequence - C.immitis:217 P.ramorum:21

J3K7T3              	100.00%		H3GBJ0              	100.00%
Bootstrap support for J3K7T3 as seed ortholog is 100%.
Bootstrap support for H3GBJ0 as seed ortholog is 68%.
Alternative seed ortholog is H3GL72 (21 bits away from this cluster)

Group of orthologs #938. Best score 217 bits
Score difference with first non-orthologous sequence - C.immitis:217 P.ramorum:217

J3KIN8              	100.00%		H3G5S7              	100.00%
Bootstrap support for J3KIN8 as seed ortholog is 100%.
Bootstrap support for H3G5S7 as seed ortholog is 100%.

Group of orthologs #939. Best score 217 bits
Score difference with first non-orthologous sequence - C.immitis:217 P.ramorum:217

J3KL47              	100.00%		H3G894              	100.00%
Bootstrap support for J3KL47 as seed ortholog is 100%.
Bootstrap support for H3G894 as seed ortholog is 100%.

Group of orthologs #940. Best score 217 bits
Score difference with first non-orthologous sequence - C.immitis:217 P.ramorum:217

J3KHN7              	100.00%		H3GII1              	100.00%
Bootstrap support for J3KHN7 as seed ortholog is 100%.
Bootstrap support for H3GII1 as seed ortholog is 100%.

Group of orthologs #941. Best score 217 bits
Score difference with first non-orthologous sequence - C.immitis:217 P.ramorum:217

J3K888              	100.00%		H3GTM3              	100.00%
Bootstrap support for J3K888 as seed ortholog is 100%.
Bootstrap support for H3GTM3 as seed ortholog is 100%.

Group of orthologs #942. Best score 217 bits
Score difference with first non-orthologous sequence - C.immitis:217 P.ramorum:217

J3K6X1              	100.00%		H3H4D1              	100.00%
Bootstrap support for J3K6X1 as seed ortholog is 100%.
Bootstrap support for H3H4D1 as seed ortholog is 100%.

Group of orthologs #943. Best score 217 bits
Score difference with first non-orthologous sequence - C.immitis:217 P.ramorum:217

J3KBV9              	100.00%		H3HDQ1              	100.00%
Bootstrap support for J3KBV9 as seed ortholog is 100%.
Bootstrap support for H3HDQ1 as seed ortholog is 100%.

Group of orthologs #944. Best score 216 bits
Score difference with first non-orthologous sequence - C.immitis:216 P.ramorum:84

J3KFX9              	100.00%		H3GRU7              	100.00%
J3KHN9              	18.77%		H3G534              	25.45%
Bootstrap support for J3KFX9 as seed ortholog is 100%.
Bootstrap support for H3GRU7 as seed ortholog is 94%.

Group of orthologs #945. Best score 216 bits
Score difference with first non-orthologous sequence - C.immitis:216 P.ramorum:167

J3K0N4              	100.00%		H3G642              	100.00%
Bootstrap support for J3K0N4 as seed ortholog is 100%.
Bootstrap support for H3G642 as seed ortholog is 99%.

Group of orthologs #946. Best score 216 bits
Score difference with first non-orthologous sequence - C.immitis:216 P.ramorum:216

J3K3K7              	100.00%		H3G8C1              	100.00%
Bootstrap support for J3K3K7 as seed ortholog is 100%.
Bootstrap support for H3G8C1 as seed ortholog is 100%.

Group of orthologs #947. Best score 216 bits
Score difference with first non-orthologous sequence - C.immitis:216 P.ramorum:216

J3KAC3              	100.00%		H3G6N3              	100.00%
Bootstrap support for J3KAC3 as seed ortholog is 100%.
Bootstrap support for H3G6N3 as seed ortholog is 100%.

Group of orthologs #948. Best score 216 bits
Score difference with first non-orthologous sequence - C.immitis:159 P.ramorum:51

J3KIN1              	100.00%		H3GD85              	100.00%
Bootstrap support for J3KIN1 as seed ortholog is 100%.
Bootstrap support for H3GD85 as seed ortholog is 89%.

Group of orthologs #949. Best score 216 bits
Score difference with first non-orthologous sequence - C.immitis:9 P.ramorum:43

J3KJX7              	100.00%		H3GLH0              	100.00%
Bootstrap support for J3KJX7 as seed ortholog is 61%.
Alternative seed ortholog is J3KIC7 (9 bits away from this cluster)
Bootstrap support for H3GLH0 as seed ortholog is 98%.

Group of orthologs #950. Best score 216 bits
Score difference with first non-orthologous sequence - C.immitis:216 P.ramorum:110

J3KM14              	100.00%		H3HDF6              	100.00%
Bootstrap support for J3KM14 as seed ortholog is 100%.
Bootstrap support for H3HDF6 as seed ortholog is 98%.

Group of orthologs #951. Best score 215 bits
Score difference with first non-orthologous sequence - C.immitis:111 P.ramorum:215

J3K8Q0              	100.00%		H3HC15              	100.00%
J3K466              	12.35%		
Bootstrap support for J3K8Q0 as seed ortholog is 99%.
Bootstrap support for H3HC15 as seed ortholog is 100%.

Group of orthologs #952. Best score 215 bits
Score difference with first non-orthologous sequence - C.immitis:115 P.ramorum:215

J3K199              	100.00%		H3GBB6              	100.00%
Bootstrap support for J3K199 as seed ortholog is 99%.
Bootstrap support for H3GBB6 as seed ortholog is 100%.

Group of orthologs #953. Best score 215 bits
Score difference with first non-orthologous sequence - C.immitis:215 P.ramorum:215

J3K8J2              	100.00%		H3G9Z9              	100.00%
Bootstrap support for J3K8J2 as seed ortholog is 100%.
Bootstrap support for H3G9Z9 as seed ortholog is 100%.

Group of orthologs #954. Best score 215 bits
Score difference with first non-orthologous sequence - C.immitis:215 P.ramorum:215

J3KDK4              	100.00%		H3GBK0              	100.00%
Bootstrap support for J3KDK4 as seed ortholog is 100%.
Bootstrap support for H3GBK0 as seed ortholog is 100%.

Group of orthologs #955. Best score 215 bits
Score difference with first non-orthologous sequence - C.immitis:215 P.ramorum:215

J3K9S0              	100.00%		H3GRP6              	100.00%
Bootstrap support for J3K9S0 as seed ortholog is 100%.
Bootstrap support for H3GRP6 as seed ortholog is 100%.

Group of orthologs #956. Best score 214 bits
Score difference with first non-orthologous sequence - C.immitis:161 P.ramorum:214

J3KH60              	100.00%		H3GJ43              	100.00%
I9NSK9              	12.61%		H3GJ44              	73.16%
                    	       		H3GZU1              	16.82%
                    	       		H3GZU0              	16.01%
Bootstrap support for J3KH60 as seed ortholog is 99%.
Bootstrap support for H3GJ43 as seed ortholog is 100%.

Group of orthologs #957. Best score 214 bits
Score difference with first non-orthologous sequence - C.immitis:214 P.ramorum:214

J3K3H7              	100.00%		H3GGV7              	100.00%
                    	       		H3G533              	39.13%
Bootstrap support for J3K3H7 as seed ortholog is 100%.
Bootstrap support for H3GGV7 as seed ortholog is 100%.

Group of orthologs #958. Best score 214 bits
Score difference with first non-orthologous sequence - C.immitis:38 P.ramorum:28

I9NQQ9              	100.00%		H3G9M6              	100.00%
Bootstrap support for I9NQQ9 as seed ortholog is 90%.
Bootstrap support for H3G9M6 as seed ortholog is 91%.

Group of orthologs #959. Best score 214 bits
Score difference with first non-orthologous sequence - C.immitis:142 P.ramorum:32

J3KLD5              	100.00%		H3G525              	100.00%
Bootstrap support for J3KLD5 as seed ortholog is 100%.
Bootstrap support for H3G525 as seed ortholog is 88%.

Group of orthologs #960. Best score 214 bits
Score difference with first non-orthologous sequence - C.immitis:214 P.ramorum:214

Q1E736              	100.00%		H3GG46              	100.00%
Bootstrap support for Q1E736 as seed ortholog is 100%.
Bootstrap support for H3GG46 as seed ortholog is 100%.

Group of orthologs #961. Best score 214 bits
Score difference with first non-orthologous sequence - C.immitis:28 P.ramorum:214

J3KKD0              	100.00%		H3HC72              	100.00%
Bootstrap support for J3KKD0 as seed ortholog is 75%.
Bootstrap support for H3HC72 as seed ortholog is 100%.

Group of orthologs #962. Best score 213 bits
Score difference with first non-orthologous sequence - C.immitis:30 P.ramorum:213

J3KE99              	100.00%		H3G908              	100.00%
                    	       		H3GAS3              	55.20%
                    	       		H3GME0              	36.42%
                    	       		H3G9U3              	35.26%
                    	       		H3G9U6              	26.01%
Bootstrap support for J3KE99 as seed ortholog is 79%.
Bootstrap support for H3G908 as seed ortholog is 100%.

Group of orthologs #963. Best score 213 bits
Score difference with first non-orthologous sequence - C.immitis:213 P.ramorum:59

J3KGJ2              	100.00%		H3GN11              	100.00%
                    	       		H3H5V1              	19.92%
                    	       		H3GN94              	19.50%
                    	       		H3H410              	15.82%
                    	       		H3GRJ5              	14.06%
Bootstrap support for J3KGJ2 as seed ortholog is 100%.
Bootstrap support for H3GN11 as seed ortholog is 92%.

Group of orthologs #964. Best score 213 bits
Score difference with first non-orthologous sequence - C.immitis:213 P.ramorum:213

J3K0J0              	100.00%		H3G9E5              	100.00%
Bootstrap support for J3K0J0 as seed ortholog is 100%.
Bootstrap support for H3G9E5 as seed ortholog is 100%.

Group of orthologs #965. Best score 213 bits
Score difference with first non-orthologous sequence - C.immitis:213 P.ramorum:27

J3KEG3              	100.00%		H3GIY2              	100.00%
Bootstrap support for J3KEG3 as seed ortholog is 100%.
Bootstrap support for H3GIY2 as seed ortholog is 88%.

Group of orthologs #966. Best score 213 bits
Score difference with first non-orthologous sequence - C.immitis:213 P.ramorum:213

J3K8B6              	100.00%		H3GSJ6              	100.00%
Bootstrap support for J3K8B6 as seed ortholog is 100%.
Bootstrap support for H3GSJ6 as seed ortholog is 100%.

Group of orthologs #967. Best score 213 bits
Score difference with first non-orthologous sequence - C.immitis:213 P.ramorum:29

J0HI33              	100.00%		H3HCM2              	100.00%
Bootstrap support for J0HI33 as seed ortholog is 100%.
Bootstrap support for H3HCM2 as seed ortholog is 84%.

Group of orthologs #968. Best score 212 bits
Score difference with first non-orthologous sequence - C.immitis:212 P.ramorum:212

J3K1M1              	100.00%		H3GEK5              	100.00%
Bootstrap support for J3K1M1 as seed ortholog is 100%.
Bootstrap support for H3GEK5 as seed ortholog is 100%.

Group of orthologs #969. Best score 212 bits
Score difference with first non-orthologous sequence - C.immitis:212 P.ramorum:212

Q1DZB0              	100.00%		H3GMF5              	100.00%
Bootstrap support for Q1DZB0 as seed ortholog is 100%.
Bootstrap support for H3GMF5 as seed ortholog is 100%.

Group of orthologs #970. Best score 212 bits
Score difference with first non-orthologous sequence - C.immitis:212 P.ramorum:212

J3KIC5              	100.00%		H3HC64              	100.00%
Bootstrap support for J3KIC5 as seed ortholog is 100%.
Bootstrap support for H3HC64 as seed ortholog is 100%.

Group of orthologs #971. Best score 211 bits
Score difference with first non-orthologous sequence - C.immitis:33 P.ramorum:70

J3KG90              	100.00%		H3GA89              	100.00%
                    	       		H3GYI4              	71.65%
                    	       		H3GYI2              	68.92%
                    	       		H3GYI3              	66.96%
                    	       		H3G620              	25.95%
Bootstrap support for J3KG90 as seed ortholog is 72%.
Alternative seed ortholog is J3KJC8 (33 bits away from this cluster)
Bootstrap support for H3GA89 as seed ortholog is 89%.

Group of orthologs #972. Best score 211 bits
Score difference with first non-orthologous sequence - C.immitis:211 P.ramorum:211

J3K3G3              	100.00%		H3G7M3              	100.00%
Bootstrap support for J3K3G3 as seed ortholog is 100%.
Bootstrap support for H3G7M3 as seed ortholog is 100%.

Group of orthologs #973. Best score 211 bits
Score difference with first non-orthologous sequence - C.immitis:211 P.ramorum:211

J3K3G4              	100.00%		H3GU44              	100.00%
Bootstrap support for J3K3G4 as seed ortholog is 100%.
Bootstrap support for H3GU44 as seed ortholog is 100%.

Group of orthologs #974. Best score 211 bits
Score difference with first non-orthologous sequence - C.immitis:211 P.ramorum:211

J3K529              	100.00%		H3GUB3              	100.00%
Bootstrap support for J3K529 as seed ortholog is 100%.
Bootstrap support for H3GUB3 as seed ortholog is 100%.

Group of orthologs #975. Best score 210 bits
Score difference with first non-orthologous sequence - C.immitis:210 P.ramorum:210

J3K5N5              	100.00%		H3HCG3              	100.00%
                    	       		H3G8U0              	10.84%
                    	       		H3GA58              	9.62%
Bootstrap support for J3K5N5 as seed ortholog is 100%.
Bootstrap support for H3HCG3 as seed ortholog is 100%.

Group of orthologs #976. Best score 210 bits
Score difference with first non-orthologous sequence - C.immitis:210 P.ramorum:110

J3K1Z0              	100.00%		H3G9C0              	100.00%
Bootstrap support for J3K1Z0 as seed ortholog is 100%.
Bootstrap support for H3G9C0 as seed ortholog is 100%.

Group of orthologs #977. Best score 210 bits
Score difference with first non-orthologous sequence - C.immitis:210 P.ramorum:210

J3KDZ2              	100.00%		H3G5Y3              	100.00%
Bootstrap support for J3KDZ2 as seed ortholog is 100%.
Bootstrap support for H3G5Y3 as seed ortholog is 100%.

Group of orthologs #978. Best score 210 bits
Score difference with first non-orthologous sequence - C.immitis:210 P.ramorum:210

J3K7P9              	100.00%		H3GI54              	100.00%
Bootstrap support for J3K7P9 as seed ortholog is 100%.
Bootstrap support for H3GI54 as seed ortholog is 100%.

Group of orthologs #979. Best score 210 bits
Score difference with first non-orthologous sequence - C.immitis:111 P.ramorum:124

J3KIU9              	100.00%		H3G861              	100.00%
Bootstrap support for J3KIU9 as seed ortholog is 100%.
Bootstrap support for H3G861 as seed ortholog is 100%.

Group of orthologs #980. Best score 210 bits
Score difference with first non-orthologous sequence - C.immitis:210 P.ramorum:210

J3K4F7              	100.00%		H3GPI8              	100.00%
Bootstrap support for J3K4F7 as seed ortholog is 100%.
Bootstrap support for H3GPI8 as seed ortholog is 100%.

Group of orthologs #981. Best score 210 bits
Score difference with first non-orthologous sequence - C.immitis:210 P.ramorum:210

J3K332              	100.00%		H3GVQ2              	100.00%
Bootstrap support for J3K332 as seed ortholog is 100%.
Bootstrap support for H3GVQ2 as seed ortholog is 100%.

Group of orthologs #982. Best score 210 bits
Score difference with first non-orthologous sequence - C.immitis:210 P.ramorum:210

Q1E0W9              	100.00%		H3GS88              	100.00%
Bootstrap support for Q1E0W9 as seed ortholog is 100%.
Bootstrap support for H3GS88 as seed ortholog is 100%.

Group of orthologs #983. Best score 210 bits
Score difference with first non-orthologous sequence - C.immitis:61 P.ramorum:110

J3KG26              	100.00%		H3HC79              	100.00%
Bootstrap support for J3KG26 as seed ortholog is 95%.
Bootstrap support for H3HC79 as seed ortholog is 99%.

Group of orthologs #984. Best score 209 bits
Score difference with first non-orthologous sequence - C.immitis:209 P.ramorum:209

J3KB89              	100.00%		H3GVB8              	100.00%
J3KI82              	13.81%		H3G9X8              	70.79%
Bootstrap support for J3KB89 as seed ortholog is 100%.
Bootstrap support for H3GVB8 as seed ortholog is 100%.

Group of orthologs #985. Best score 209 bits
Score difference with first non-orthologous sequence - C.immitis:209 P.ramorum:209

J3KDP7              	100.00%		H3G8T5              	100.00%
Bootstrap support for J3KDP7 as seed ortholog is 100%.
Bootstrap support for H3G8T5 as seed ortholog is 100%.

Group of orthologs #986. Best score 209 bits
Score difference with first non-orthologous sequence - C.immitis:32 P.ramorum:81

J3KHJ6              	100.00%		H3GA69              	100.00%
Bootstrap support for J3KHJ6 as seed ortholog is 79%.
Bootstrap support for H3GA69 as seed ortholog is 99%.

Group of orthologs #987. Best score 209 bits
Score difference with first non-orthologous sequence - C.immitis:209 P.ramorum:209

J3KF76              	100.00%		H3GS73              	100.00%
Bootstrap support for J3KF76 as seed ortholog is 100%.
Bootstrap support for H3GS73 as seed ortholog is 100%.

Group of orthologs #988. Best score 208 bits
Score difference with first non-orthologous sequence - C.immitis:208 P.ramorum:208

J3KJM6              	100.00%		H3G7I7              	100.00%
                    	       		H3G794              	52.91%
                    	       		H3GQQ0              	30.67%
Bootstrap support for J3KJM6 as seed ortholog is 100%.
Bootstrap support for H3G7I7 as seed ortholog is 100%.

Group of orthologs #989. Best score 208 bits
Score difference with first non-orthologous sequence - C.immitis:208 P.ramorum:208

J3K2Q3              	100.00%		H3GR01              	100.00%
J3KGD4              	16.25%		
Bootstrap support for J3K2Q3 as seed ortholog is 100%.
Bootstrap support for H3GR01 as seed ortholog is 100%.

Group of orthologs #990. Best score 208 bits
Score difference with first non-orthologous sequence - C.immitis:104 P.ramorum:120

J3K6H0              	100.00%		H3G9F5              	100.00%
Bootstrap support for J3K6H0 as seed ortholog is 99%.
Bootstrap support for H3G9F5 as seed ortholog is 99%.

Group of orthologs #991. Best score 208 bits
Score difference with first non-orthologous sequence - C.immitis:208 P.ramorum:208

J3K4V6              	100.00%		H3GLU5              	100.00%
Bootstrap support for J3K4V6 as seed ortholog is 100%.
Bootstrap support for H3GLU5 as seed ortholog is 100%.

Group of orthologs #992. Best score 208 bits
Score difference with first non-orthologous sequence - C.immitis:208 P.ramorum:208

J3K825              	100.00%		H3GU32              	100.00%
Bootstrap support for J3K825 as seed ortholog is 100%.
Bootstrap support for H3GU32 as seed ortholog is 100%.

Group of orthologs #993. Best score 208 bits
Score difference with first non-orthologous sequence - C.immitis:208 P.ramorum:208

J3K5E6              	100.00%		H3H2J5              	100.00%
Bootstrap support for J3K5E6 as seed ortholog is 100%.
Bootstrap support for H3H2J5 as seed ortholog is 100%.

Group of orthologs #994. Best score 207 bits
Score difference with first non-orthologous sequence - C.immitis:207 P.ramorum:207

J0HDS7              	100.00%		H3GIY8              	100.00%
Bootstrap support for J0HDS7 as seed ortholog is 100%.
Bootstrap support for H3GIY8 as seed ortholog is 100%.

Group of orthologs #995. Best score 207 bits
Score difference with first non-orthologous sequence - C.immitis:207 P.ramorum:207

J3KET5              	100.00%		H3G9L4              	100.00%
Bootstrap support for J3KET5 as seed ortholog is 100%.
Bootstrap support for H3G9L4 as seed ortholog is 100%.

Group of orthologs #996. Best score 207 bits
Score difference with first non-orthologous sequence - C.immitis:207 P.ramorum:207

J3KJE1              	100.00%		H3G7N8              	100.00%
Bootstrap support for J3KJE1 as seed ortholog is 100%.
Bootstrap support for H3G7N8 as seed ortholog is 100%.

Group of orthologs #997. Best score 207 bits
Score difference with first non-orthologous sequence - C.immitis:207 P.ramorum:207

J3KC75              	100.00%		H3GQR9              	100.00%
Bootstrap support for J3KC75 as seed ortholog is 100%.
Bootstrap support for H3GQR9 as seed ortholog is 100%.

Group of orthologs #998. Best score 207 bits
Score difference with first non-orthologous sequence - C.immitis:207 P.ramorum:207

I9NRL8              	100.00%		H3H6N8              	100.00%
Bootstrap support for I9NRL8 as seed ortholog is 100%.
Bootstrap support for H3H6N8 as seed ortholog is 100%.

Group of orthologs #999. Best score 207 bits
Score difference with first non-orthologous sequence - C.immitis:14 P.ramorum:207

J3KD83              	100.00%		H3GY76              	100.00%
Bootstrap support for J3KD83 as seed ortholog is 59%.
Alternative seed ortholog is J3K9G4 (14 bits away from this cluster)
Bootstrap support for H3GY76 as seed ortholog is 100%.

Group of orthologs #1000. Best score 207 bits
Score difference with first non-orthologous sequence - C.immitis:207 P.ramorum:207

J3K4E9              	100.00%		H3HBD8              	100.00%
Bootstrap support for J3K4E9 as seed ortholog is 100%.
Bootstrap support for H3HBD8 as seed ortholog is 100%.

Group of orthologs #1001. Best score 207 bits
Score difference with first non-orthologous sequence - C.immitis:207 P.ramorum:207

Q1DJF7              	100.00%		H3GU14              	100.00%
Bootstrap support for Q1DJF7 as seed ortholog is 100%.
Bootstrap support for H3GU14 as seed ortholog is 100%.

Group of orthologs #1002. Best score 207 bits
Score difference with first non-orthologous sequence - C.immitis:207 P.ramorum:130

J3KBC7              	100.00%		H3HBK4              	100.00%
Bootstrap support for J3KBC7 as seed ortholog is 100%.
Bootstrap support for H3HBK4 as seed ortholog is 99%.

Group of orthologs #1003. Best score 206 bits
Score difference with first non-orthologous sequence - C.immitis:206 P.ramorum:206

J3KBC3              	100.00%		H3GI57              	100.00%
Bootstrap support for J3KBC3 as seed ortholog is 100%.
Bootstrap support for H3GI57 as seed ortholog is 100%.

Group of orthologs #1004. Best score 206 bits
Score difference with first non-orthologous sequence - C.immitis:206 P.ramorum:206

J3K1M7              	100.00%		H3H2J7              	100.00%
Bootstrap support for J3K1M7 as seed ortholog is 100%.
Bootstrap support for H3H2J7 as seed ortholog is 100%.

Group of orthologs #1005. Best score 206 bits
Score difference with first non-orthologous sequence - C.immitis:206 P.ramorum:206

J3KEV5              	100.00%		H3GT40              	100.00%
Bootstrap support for J3KEV5 as seed ortholog is 100%.
Bootstrap support for H3GT40 as seed ortholog is 100%.

Group of orthologs #1006. Best score 206 bits
Score difference with first non-orthologous sequence - C.immitis:206 P.ramorum:206

J3KDD3              	100.00%		H3GZZ0              	100.00%
Bootstrap support for J3KDD3 as seed ortholog is 100%.
Bootstrap support for H3GZZ0 as seed ortholog is 100%.

Group of orthologs #1007. Best score 206 bits
Score difference with first non-orthologous sequence - C.immitis:206 P.ramorum:49

J3KAT4              	100.00%		H3HBL5              	100.00%
Bootstrap support for J3KAT4 as seed ortholog is 100%.
Bootstrap support for H3HBL5 as seed ortholog is 99%.

Group of orthologs #1008. Best score 205 bits
Score difference with first non-orthologous sequence - C.immitis:94 P.ramorum:205

J3K0T8              	100.00%		H3GBG3              	100.00%
J3KBV6              	27.21%		
Bootstrap support for J3K0T8 as seed ortholog is 99%.
Bootstrap support for H3GBG3 as seed ortholog is 100%.

Group of orthologs #1009. Best score 205 bits
Score difference with first non-orthologous sequence - C.immitis:131 P.ramorum:30

J3KE10              	100.00%		H3G8M8              	100.00%
                    	       		H3G772              	42.76%
Bootstrap support for J3KE10 as seed ortholog is 100%.
Bootstrap support for H3G8M8 as seed ortholog is 84%.

Group of orthologs #1010. Best score 205 bits
Score difference with first non-orthologous sequence - C.immitis:205 P.ramorum:205

J3K5F8              	100.00%		H3G591              	100.00%
Bootstrap support for J3K5F8 as seed ortholog is 100%.
Bootstrap support for H3G591 as seed ortholog is 100%.

Group of orthologs #1011. Best score 205 bits
Score difference with first non-orthologous sequence - C.immitis:205 P.ramorum:205

J3KCE3              	100.00%		H3G8B6              	100.00%
Bootstrap support for J3KCE3 as seed ortholog is 100%.
Bootstrap support for H3G8B6 as seed ortholog is 100%.

Group of orthologs #1012. Best score 205 bits
Score difference with first non-orthologous sequence - C.immitis:146 P.ramorum:205

J3K669              	100.00%		H3GN59              	100.00%
Bootstrap support for J3K669 as seed ortholog is 99%.
Bootstrap support for H3GN59 as seed ortholog is 100%.

Group of orthologs #1013. Best score 205 bits
Score difference with first non-orthologous sequence - C.immitis:148 P.ramorum:81

J3K1W5              	100.00%		H3GVP4              	100.00%
Bootstrap support for J3K1W5 as seed ortholog is 99%.
Bootstrap support for H3GVP4 as seed ortholog is 98%.

Group of orthologs #1014. Best score 205 bits
Score difference with first non-orthologous sequence - C.immitis:205 P.ramorum:205

J3K1S6              	100.00%		H3H144              	100.00%
Bootstrap support for J3K1S6 as seed ortholog is 100%.
Bootstrap support for H3H144 as seed ortholog is 100%.

Group of orthologs #1015. Best score 205 bits
Score difference with first non-orthologous sequence - C.immitis:205 P.ramorum:205

J3K9Z4              	100.00%		H3HCT8              	100.00%
Bootstrap support for J3K9Z4 as seed ortholog is 100%.
Bootstrap support for H3HCT8 as seed ortholog is 100%.

Group of orthologs #1016. Best score 204 bits
Score difference with first non-orthologous sequence - C.immitis:204 P.ramorum:204

J3KCK3              	100.00%		H3GSW4              	100.00%
J3KJG6              	57.26%		H3GBN3              	13.00%
J3KI27              	44.58%		H3GZM7              	12.90%
J3K8W3              	24.13%		H3GNG0              	12.00%
J3K069              	18.10%		H3H8C2              	11.41%
                    	       		H3GPQ0              	6.15%
Bootstrap support for J3KCK3 as seed ortholog is 100%.
Bootstrap support for H3GSW4 as seed ortholog is 100%.

Group of orthologs #1017. Best score 204 bits
Score difference with first non-orthologous sequence - C.immitis:204 P.ramorum:204

J3K5E2              	100.00%		H3GAY1              	100.00%
                    	       		H3GAD4              	81.36%
Bootstrap support for J3K5E2 as seed ortholog is 100%.
Bootstrap support for H3GAY1 as seed ortholog is 100%.

Group of orthologs #1018. Best score 204 bits
Score difference with first non-orthologous sequence - C.immitis:204 P.ramorum:204

J3KB15              	100.00%		H3GFJ9              	100.00%
Bootstrap support for J3KB15 as seed ortholog is 100%.
Bootstrap support for H3GFJ9 as seed ortholog is 100%.

Group of orthologs #1019. Best score 203 bits
Score difference with first non-orthologous sequence - C.immitis:151 P.ramorum:203

J3KF10              	100.00%		H3GEM8              	100.00%
Bootstrap support for J3KF10 as seed ortholog is 99%.
Bootstrap support for H3GEM8 as seed ortholog is 100%.

Group of orthologs #1020. Best score 203 bits
Score difference with first non-orthologous sequence - C.immitis:203 P.ramorum:203

J3KAP9              	100.00%		H3GK58              	100.00%
Bootstrap support for J3KAP9 as seed ortholog is 100%.
Bootstrap support for H3GK58 as seed ortholog is 100%.

Group of orthologs #1021. Best score 203 bits
Score difference with first non-orthologous sequence - C.immitis:203 P.ramorum:203

J3K2G6              	100.00%		H3GU37              	100.00%
Bootstrap support for J3K2G6 as seed ortholog is 100%.
Bootstrap support for H3GU37 as seed ortholog is 100%.

Group of orthologs #1022. Best score 203 bits
Score difference with first non-orthologous sequence - C.immitis:203 P.ramorum:203

J3KHR3              	100.00%		H3GEU2              	100.00%
Bootstrap support for J3KHR3 as seed ortholog is 100%.
Bootstrap support for H3GEU2 as seed ortholog is 100%.

Group of orthologs #1023. Best score 203 bits
Score difference with first non-orthologous sequence - C.immitis:203 P.ramorum:203

J3KJ82              	100.00%		H3GG19              	100.00%
Bootstrap support for J3KJ82 as seed ortholog is 100%.
Bootstrap support for H3GG19 as seed ortholog is 100%.

Group of orthologs #1024. Best score 203 bits
Score difference with first non-orthologous sequence - C.immitis:80 P.ramorum:203

J3KB34              	100.00%		H3GRS6              	100.00%
Bootstrap support for J3KB34 as seed ortholog is 96%.
Bootstrap support for H3GRS6 as seed ortholog is 100%.

Group of orthologs #1025. Best score 203 bits
Score difference with first non-orthologous sequence - C.immitis:203 P.ramorum:203

J3KDM4              	100.00%		H3GQ98              	100.00%
Bootstrap support for J3KDM4 as seed ortholog is 100%.
Bootstrap support for H3GQ98 as seed ortholog is 100%.

Group of orthologs #1026. Best score 202 bits
Score difference with first non-orthologous sequence - C.immitis:202 P.ramorum:202

J3KER6              	100.00%		H3GXB4              	100.00%
Bootstrap support for J3KER6 as seed ortholog is 100%.
Bootstrap support for H3GXB4 as seed ortholog is 100%.

Group of orthologs #1027. Best score 202 bits
Score difference with first non-orthologous sequence - C.immitis:202 P.ramorum:202

J3KFF7              	100.00%		H3HDT2              	100.00%
Bootstrap support for J3KFF7 as seed ortholog is 100%.
Bootstrap support for H3HDT2 as seed ortholog is 100%.

Group of orthologs #1028. Best score 201 bits
Score difference with first non-orthologous sequence - C.immitis:201 P.ramorum:201

J3K9P5              	100.00%		H3G7U0              	100.00%
Bootstrap support for J3K9P5 as seed ortholog is 100%.
Bootstrap support for H3G7U0 as seed ortholog is 100%.

Group of orthologs #1029. Best score 201 bits
Score difference with first non-orthologous sequence - C.immitis:201 P.ramorum:119

J3K892              	100.00%		H3GA47              	100.00%
Bootstrap support for J3K892 as seed ortholog is 100%.
Bootstrap support for H3GA47 as seed ortholog is 100%.

Group of orthologs #1030. Best score 201 bits
Score difference with first non-orthologous sequence - C.immitis:201 P.ramorum:201

J3KJV0              	100.00%		H3GBK4              	100.00%
Bootstrap support for J3KJV0 as seed ortholog is 100%.
Bootstrap support for H3GBK4 as seed ortholog is 100%.

Group of orthologs #1031. Best score 201 bits
Score difference with first non-orthologous sequence - C.immitis:201 P.ramorum:36

I9XLL8              	100.00%		H3H0Y8              	100.00%
Bootstrap support for I9XLL8 as seed ortholog is 100%.
Bootstrap support for H3H0Y8 as seed ortholog is 93%.

Group of orthologs #1032. Best score 201 bits
Score difference with first non-orthologous sequence - C.immitis:201 P.ramorum:201

J3KE78              	100.00%		H3GVD4              	100.00%
Bootstrap support for J3KE78 as seed ortholog is 100%.
Bootstrap support for H3GVD4 as seed ortholog is 100%.

Group of orthologs #1033. Best score 200 bits
Score difference with first non-orthologous sequence - C.immitis:200 P.ramorum:200

J3K049              	100.00%		H3GAN6              	100.00%
                    	       		H3GSY3              	100.00%
                    	       		H3HCB8              	71.97%
                    	       		H3GAN7              	69.18%
                    	       		H3GAN8              	63.61%
                    	       		H3H297              	40.00%
                    	       		H3H296              	39.67%
                    	       		H3G9Q5              	39.28%
                    	       		H3GB18              	38.00%
                    	       		H3GSY9              	37.79%
                    	       		H3H298              	37.38%
                    	       		H3G9Q3              	36.31%
                    	       		H3GB24              	35.88%
                    	       		H3G9Q4              	35.67%
                    	       		H3H9X5              	35.03%
                    	       		H3G742              	34.18%
                    	       		H3G9Q6              	32.27%
                    	       		H3GAN5              	30.16%
                    	       		H3H741              	29.09%
                    	       		H3GAN4              	28.52%
                    	       		H3GSY4              	19.32%
                    	       		H3G8F8              	19.02%
                    	       		H3GSY8              	15.29%
                    	       		H3GAJ4              	13.77%
                    	       		H3GAJ3              	13.11%
Bootstrap support for J3K049 as seed ortholog is 100%.
Bootstrap support for H3GAN6 as seed ortholog is 100%.
Bootstrap support for H3GSY3 as seed ortholog is 100%.

Group of orthologs #1034. Best score 200 bits
Score difference with first non-orthologous sequence - C.immitis:97 P.ramorum:102

J3K2V1              	100.00%		H3G7P2              	100.00%
Bootstrap support for J3K2V1 as seed ortholog is 99%.
Bootstrap support for H3G7P2 as seed ortholog is 99%.

Group of orthologs #1035. Best score 200 bits
Score difference with first non-orthologous sequence - C.immitis:200 P.ramorum:200

J3K743              	100.00%		H3GQ87              	100.00%
Bootstrap support for J3K743 as seed ortholog is 100%.
Bootstrap support for H3GQ87 as seed ortholog is 100%.

Group of orthologs #1036. Best score 199 bits
Score difference with first non-orthologous sequence - C.immitis:199 P.ramorum:199

J3K9M0              	100.00%		H3GFE9              	100.00%
Bootstrap support for J3K9M0 as seed ortholog is 100%.
Bootstrap support for H3GFE9 as seed ortholog is 100%.

Group of orthologs #1037. Best score 199 bits
Score difference with first non-orthologous sequence - C.immitis:199 P.ramorum:199

Q1E4K5              	100.00%		H3G8X4              	100.00%
Bootstrap support for Q1E4K5 as seed ortholog is 100%.
Bootstrap support for H3G8X4 as seed ortholog is 100%.

Group of orthologs #1038. Best score 199 bits
Score difference with first non-orthologous sequence - C.immitis:199 P.ramorum:199

Q1DKL9              	100.00%		H3GV05              	100.00%
Bootstrap support for Q1DKL9 as seed ortholog is 100%.
Bootstrap support for H3GV05 as seed ortholog is 100%.

Group of orthologs #1039. Best score 198 bits
Score difference with first non-orthologous sequence - C.immitis:143 P.ramorum:198

J3K2W2              	100.00%		H3GAE9              	100.00%
Bootstrap support for J3K2W2 as seed ortholog is 99%.
Bootstrap support for H3GAE9 as seed ortholog is 100%.

Group of orthologs #1040. Best score 198 bits
Score difference with first non-orthologous sequence - C.immitis:198 P.ramorum:115

J3K9P7              	100.00%		H3G6Y5              	100.00%
Bootstrap support for J3K9P7 as seed ortholog is 100%.
Bootstrap support for H3G6Y5 as seed ortholog is 99%.

Group of orthologs #1041. Best score 198 bits
Score difference with first non-orthologous sequence - C.immitis:100 P.ramorum:118

J3KD93              	100.00%		H3G5G1              	100.00%
Bootstrap support for J3KD93 as seed ortholog is 99%.
Bootstrap support for H3G5G1 as seed ortholog is 100%.

Group of orthologs #1042. Best score 197 bits
Score difference with first non-orthologous sequence - C.immitis:197 P.ramorum:49

J3K7U1              	100.00%		H3H4R1              	100.00%
                    	       		H3G577              	12.94%
Bootstrap support for J3K7U1 as seed ortholog is 100%.
Bootstrap support for H3H4R1 as seed ortholog is 84%.

Group of orthologs #1043. Best score 197 bits
Score difference with first non-orthologous sequence - C.immitis:197 P.ramorum:197

J3K783              	100.00%		H3G8A3              	100.00%
Bootstrap support for J3K783 as seed ortholog is 100%.
Bootstrap support for H3G8A3 as seed ortholog is 100%.

Group of orthologs #1044. Best score 197 bits
Score difference with first non-orthologous sequence - C.immitis:197 P.ramorum:197

J3K1Q4              	100.00%		H3GG45              	100.00%
Bootstrap support for J3K1Q4 as seed ortholog is 100%.
Bootstrap support for H3GG45 as seed ortholog is 100%.

Group of orthologs #1045. Best score 197 bits
Score difference with first non-orthologous sequence - C.immitis:197 P.ramorum:197

J3KB85              	100.00%		H3GEA6              	100.00%
Bootstrap support for J3KB85 as seed ortholog is 100%.
Bootstrap support for H3GEA6 as seed ortholog is 100%.

Group of orthologs #1046. Best score 196 bits
Score difference with first non-orthologous sequence - C.immitis:196 P.ramorum:196

J3K9L7              	100.00%		H3G953              	100.00%
J3K0G2              	12.96%		H3G954              	100.00%
Bootstrap support for J3K9L7 as seed ortholog is 100%.
Bootstrap support for H3G953 as seed ortholog is 100%.
Bootstrap support for H3G954 as seed ortholog is 100%.

Group of orthologs #1047. Best score 196 bits
Score difference with first non-orthologous sequence - C.immitis:196 P.ramorum:196

J0HIC7              	100.00%		H3GFQ7              	100.00%
Bootstrap support for J0HIC7 as seed ortholog is 100%.
Bootstrap support for H3GFQ7 as seed ortholog is 100%.

Group of orthologs #1048. Best score 196 bits
Score difference with first non-orthologous sequence - C.immitis:196 P.ramorum:60

J3KL04              	100.00%		H3G8B5              	100.00%
Bootstrap support for J3KL04 as seed ortholog is 100%.
Bootstrap support for H3G8B5 as seed ortholog is 94%.

Group of orthologs #1049. Best score 196 bits
Score difference with first non-orthologous sequence - C.immitis:196 P.ramorum:196

J3KHW0              	100.00%		H3GJM3              	100.00%
Bootstrap support for J3KHW0 as seed ortholog is 100%.
Bootstrap support for H3GJM3 as seed ortholog is 100%.

Group of orthologs #1050. Best score 196 bits
Score difference with first non-orthologous sequence - C.immitis:196 P.ramorum:196

I9NN85              	100.00%		H3HBM0              	100.00%
Bootstrap support for I9NN85 as seed ortholog is 100%.
Bootstrap support for H3HBM0 as seed ortholog is 100%.

Group of orthologs #1051. Best score 195 bits
Score difference with first non-orthologous sequence - C.immitis:57 P.ramorum:195

J3KM69              	100.00%		H3GUI6              	100.00%
                    	       		H3H3D6              	41.02%
Bootstrap support for J3KM69 as seed ortholog is 83%.
Bootstrap support for H3GUI6 as seed ortholog is 100%.

Group of orthologs #1052. Best score 195 bits
Score difference with first non-orthologous sequence - C.immitis:195 P.ramorum:195

J3K315              	100.00%		H3G8T4              	100.00%
Bootstrap support for J3K315 as seed ortholog is 100%.
Bootstrap support for H3G8T4 as seed ortholog is 100%.

Group of orthologs #1053. Best score 195 bits
Score difference with first non-orthologous sequence - C.immitis:195 P.ramorum:195

J3KAU6              	100.00%		H3GA40              	100.00%
Bootstrap support for J3KAU6 as seed ortholog is 100%.
Bootstrap support for H3GA40 as seed ortholog is 100%.

Group of orthologs #1054. Best score 195 bits
Score difference with first non-orthologous sequence - C.immitis:53 P.ramorum:43

J3KAJ2              	100.00%		H3GNQ4              	100.00%
Bootstrap support for J3KAJ2 as seed ortholog is 85%.
Bootstrap support for H3GNQ4 as seed ortholog is 86%.

Group of orthologs #1055. Best score 195 bits
Score difference with first non-orthologous sequence - C.immitis:195 P.ramorum:101

J3KGB2              	100.00%		H3GY11              	100.00%
Bootstrap support for J3KGB2 as seed ortholog is 100%.
Bootstrap support for H3GY11 as seed ortholog is 93%.

Group of orthologs #1056. Best score 195 bits
Score difference with first non-orthologous sequence - C.immitis:195 P.ramorum:101

J3KC10              	100.00%		H3H2N2              	100.00%
Bootstrap support for J3KC10 as seed ortholog is 100%.
Bootstrap support for H3H2N2 as seed ortholog is 99%.

Group of orthologs #1057. Best score 195 bits
Score difference with first non-orthologous sequence - C.immitis:119 P.ramorum:101

Q1DNC5              	100.00%		H3GTD3              	100.00%
Bootstrap support for Q1DNC5 as seed ortholog is 99%.
Bootstrap support for H3GTD3 as seed ortholog is 99%.

Group of orthologs #1058. Best score 195 bits
Score difference with first non-orthologous sequence - C.immitis:93 P.ramorum:195

J3KJL4              	100.00%		H3HED1              	100.00%
Bootstrap support for J3KJL4 as seed ortholog is 99%.
Bootstrap support for H3HED1 as seed ortholog is 100%.

Group of orthologs #1059. Best score 194 bits
Score difference with first non-orthologous sequence - C.immitis:194 P.ramorum:194

J3KJ24              	100.00%		H3GR58              	100.00%
J3KEY6              	46.31%		
Bootstrap support for J3KJ24 as seed ortholog is 100%.
Bootstrap support for H3GR58 as seed ortholog is 100%.

Group of orthologs #1060. Best score 194 bits
Score difference with first non-orthologous sequence - C.immitis:194 P.ramorum:194

J3K6G5              	100.00%		H3G8S1              	100.00%
Bootstrap support for J3K6G5 as seed ortholog is 100%.
Bootstrap support for H3G8S1 as seed ortholog is 100%.

Group of orthologs #1061. Best score 194 bits
Score difference with first non-orthologous sequence - C.immitis:194 P.ramorum:194

J3K9G3              	100.00%		H3H058              	100.00%
Bootstrap support for J3K9G3 as seed ortholog is 100%.
Bootstrap support for H3H058 as seed ortholog is 100%.

Group of orthologs #1062. Best score 194 bits
Score difference with first non-orthologous sequence - C.immitis:31 P.ramorum:194

J0HHF8              	100.00%		H3HEG2              	100.00%
Bootstrap support for J0HHF8 as seed ortholog is 90%.
Bootstrap support for H3HEG2 as seed ortholog is 100%.

Group of orthologs #1063. Best score 194 bits
Score difference with first non-orthologous sequence - C.immitis:194 P.ramorum:194

J3KFT5              	100.00%		H3H5G2              	100.00%
Bootstrap support for J3KFT5 as seed ortholog is 100%.
Bootstrap support for H3H5G2 as seed ortholog is 100%.

Group of orthologs #1064. Best score 193 bits
Score difference with first non-orthologous sequence - C.immitis:193 P.ramorum:193

J3K9Y2              	100.00%		H3G5L7              	100.00%
Bootstrap support for J3K9Y2 as seed ortholog is 100%.
Bootstrap support for H3G5L7 as seed ortholog is 100%.

Group of orthologs #1065. Best score 193 bits
Score difference with first non-orthologous sequence - C.immitis:193 P.ramorum:43

J3KHW3              	100.00%		H3H2R1              	100.00%
Bootstrap support for J3KHW3 as seed ortholog is 100%.
Bootstrap support for H3H2R1 as seed ortholog is 80%.

Group of orthologs #1066. Best score 193 bits
Score difference with first non-orthologous sequence - C.immitis:193 P.ramorum:193

J3KJD5              	100.00%		H3HD70              	100.00%
Bootstrap support for J3KJD5 as seed ortholog is 100%.
Bootstrap support for H3HD70 as seed ortholog is 100%.

Group of orthologs #1067. Best score 192 bits
Score difference with first non-orthologous sequence - C.immitis:96 P.ramorum:81

J3K5M0              	100.00%		H3GAA9              	100.00%
Bootstrap support for J3K5M0 as seed ortholog is 99%.
Bootstrap support for H3GAA9 as seed ortholog is 96%.

Group of orthologs #1068. Best score 192 bits
Score difference with first non-orthologous sequence - C.immitis:192 P.ramorum:192

J3KB54              	100.00%		H3GZK8              	100.00%
Bootstrap support for J3KB54 as seed ortholog is 100%.
Bootstrap support for H3GZK8 as seed ortholog is 100%.

Group of orthologs #1069. Best score 191 bits
Score difference with first non-orthologous sequence - C.immitis:103 P.ramorum:191

J3KBI4              	100.00%		H3G9Z5              	100.00%
J3KFX2              	64.29%		
Bootstrap support for J3KBI4 as seed ortholog is 100%.
Bootstrap support for H3G9Z5 as seed ortholog is 100%.

Group of orthologs #1070. Best score 191 bits
Score difference with first non-orthologous sequence - C.immitis:191 P.ramorum:82

J3KLL0              	100.00%		H3G824              	100.00%
                    	       		H3GAG6              	54.20%
Bootstrap support for J3KLL0 as seed ortholog is 100%.
Bootstrap support for H3G824 as seed ortholog is 99%.

Group of orthologs #1071. Best score 191 bits
Score difference with first non-orthologous sequence - C.immitis:191 P.ramorum:191

Q1DHB6              	100.00%		H3H5C8              	100.00%
                    	       		H3HDM6              	91.31%
Bootstrap support for Q1DHB6 as seed ortholog is 100%.
Bootstrap support for H3H5C8 as seed ortholog is 100%.

Group of orthologs #1072. Best score 191 bits
Score difference with first non-orthologous sequence - C.immitis:191 P.ramorum:191

J3K328              	100.00%		H3GAQ7              	100.00%
Bootstrap support for J3K328 as seed ortholog is 100%.
Bootstrap support for H3GAQ7 as seed ortholog is 100%.

Group of orthologs #1073. Best score 191 bits
Score difference with first non-orthologous sequence - C.immitis:191 P.ramorum:191

J3K7N0              	100.00%		H3GD55              	100.00%
Bootstrap support for J3K7N0 as seed ortholog is 100%.
Bootstrap support for H3GD55 as seed ortholog is 100%.

Group of orthologs #1074. Best score 191 bits
Score difference with first non-orthologous sequence - C.immitis:191 P.ramorum:191

J3KKB9              	100.00%		H3GD59              	100.00%
Bootstrap support for J3KKB9 as seed ortholog is 100%.
Bootstrap support for H3GD59 as seed ortholog is 100%.

Group of orthologs #1075. Best score 191 bits
Score difference with first non-orthologous sequence - C.immitis:191 P.ramorum:191

J3K4A5              	100.00%		H3GV69              	100.00%
Bootstrap support for J3K4A5 as seed ortholog is 100%.
Bootstrap support for H3GV69 as seed ortholog is 100%.

Group of orthologs #1076. Best score 191 bits
Score difference with first non-orthologous sequence - C.immitis:191 P.ramorum:149

J3KEU4              	100.00%		H3GL90              	100.00%
Bootstrap support for J3KEU4 as seed ortholog is 100%.
Bootstrap support for H3GL90 as seed ortholog is 99%.

Group of orthologs #1077. Best score 191 bits
Score difference with first non-orthologous sequence - C.immitis:191 P.ramorum:57

J3K440              	100.00%		H3H461              	100.00%
Bootstrap support for J3K440 as seed ortholog is 100%.
Bootstrap support for H3H461 as seed ortholog is 97%.

Group of orthologs #1078. Best score 190 bits
Score difference with first non-orthologous sequence - C.immitis:190 P.ramorum:190

J3KBG7              	100.00%		H3GH52              	100.00%
Bootstrap support for J3KBG7 as seed ortholog is 100%.
Bootstrap support for H3GH52 as seed ortholog is 100%.

Group of orthologs #1079. Best score 190 bits
Score difference with first non-orthologous sequence - C.immitis:190 P.ramorum:190

J3KKV4              	100.00%		H3G9T8              	100.00%
Bootstrap support for J3KKV4 as seed ortholog is 100%.
Bootstrap support for H3G9T8 as seed ortholog is 100%.

Group of orthologs #1080. Best score 190 bits
Score difference with first non-orthologous sequence - C.immitis:190 P.ramorum:190

J3KJX9              	100.00%		H3GHG9              	100.00%
Bootstrap support for J3KJX9 as seed ortholog is 100%.
Bootstrap support for H3GHG9 as seed ortholog is 100%.

Group of orthologs #1081. Best score 189 bits
Score difference with first non-orthologous sequence - C.immitis:189 P.ramorum:189

J3KJ01              	100.00%		H3HBU7              	100.00%
                    	       		H3GWF5              	7.25%
Bootstrap support for J3KJ01 as seed ortholog is 100%.
Bootstrap support for H3HBU7 as seed ortholog is 100%.

Group of orthologs #1082. Best score 189 bits
Score difference with first non-orthologous sequence - C.immitis:123 P.ramorum:189

I9NPR6              	100.00%		H3G9P1              	100.00%
Bootstrap support for I9NPR6 as seed ortholog is 100%.
Bootstrap support for H3G9P1 as seed ortholog is 100%.

Group of orthologs #1083. Best score 189 bits
Score difference with first non-orthologous sequence - C.immitis:189 P.ramorum:189

J3KFP0              	100.00%		H3G7X6              	100.00%
Bootstrap support for J3KFP0 as seed ortholog is 100%.
Bootstrap support for H3G7X6 as seed ortholog is 100%.

Group of orthologs #1084. Best score 189 bits
Score difference with first non-orthologous sequence - C.immitis:189 P.ramorum:189

J3KCH4              	100.00%		H3GFY5              	100.00%
Bootstrap support for J3KCH4 as seed ortholog is 100%.
Bootstrap support for H3GFY5 as seed ortholog is 100%.

Group of orthologs #1085. Best score 189 bits
Score difference with first non-orthologous sequence - C.immitis:189 P.ramorum:189

Q1E9L2              	100.00%		H3GH76              	100.00%
Bootstrap support for Q1E9L2 as seed ortholog is 100%.
Bootstrap support for H3GH76 as seed ortholog is 100%.

Group of orthologs #1086. Best score 188 bits
Score difference with first non-orthologous sequence - C.immitis:92 P.ramorum:188

J3K3Q6              	100.00%		H3GHC2              	100.00%
Bootstrap support for J3K3Q6 as seed ortholog is 99%.
Bootstrap support for H3GHC2 as seed ortholog is 100%.

Group of orthologs #1087. Best score 188 bits
Score difference with first non-orthologous sequence - C.immitis:188 P.ramorum:188

J3KJ00              	100.00%		H3GHE9              	100.00%
Bootstrap support for J3KJ00 as seed ortholog is 100%.
Bootstrap support for H3GHE9 as seed ortholog is 100%.

Group of orthologs #1088. Best score 188 bits
Score difference with first non-orthologous sequence - C.immitis:188 P.ramorum:188

J3KIA0              	100.00%		H3GM34              	100.00%
Bootstrap support for J3KIA0 as seed ortholog is 100%.
Bootstrap support for H3GM34 as seed ortholog is 100%.

Group of orthologs #1089. Best score 188 bits
Score difference with first non-orthologous sequence - C.immitis:188 P.ramorum:188

J3KBD5              	100.00%		H3GXU5              	100.00%
Bootstrap support for J3KBD5 as seed ortholog is 100%.
Bootstrap support for H3GXU5 as seed ortholog is 100%.

Group of orthologs #1090. Best score 187 bits
Score difference with first non-orthologous sequence - C.immitis:187 P.ramorum:11

J3KAK8              	100.00%		H3G939              	100.00%
Bootstrap support for J3KAK8 as seed ortholog is 100%.
Bootstrap support for H3G939 as seed ortholog is 61%.
Alternative seed ortholog is H3GBW6 (11 bits away from this cluster)

Group of orthologs #1091. Best score 187 bits
Score difference with first non-orthologous sequence - C.immitis:187 P.ramorum:187

J3KDI3              	100.00%		H3G9S6              	100.00%
Bootstrap support for J3KDI3 as seed ortholog is 100%.
Bootstrap support for H3G9S6 as seed ortholog is 100%.

Group of orthologs #1092. Best score 187 bits
Score difference with first non-orthologous sequence - C.immitis:187 P.ramorum:76

J3KCQ2              	100.00%		H3H6X6              	100.00%
Bootstrap support for J3KCQ2 as seed ortholog is 100%.
Bootstrap support for H3H6X6 as seed ortholog is 91%.

Group of orthologs #1093. Best score 186 bits
Score difference with first non-orthologous sequence - C.immitis:186 P.ramorum:186

J3KDL1              	100.00%		H3GZ79              	100.00%
                    	       		H3H6Q0              	55.42%
                    	       		H3H4H7              	51.15%
Bootstrap support for J3KDL1 as seed ortholog is 100%.
Bootstrap support for H3GZ79 as seed ortholog is 100%.

Group of orthologs #1094. Best score 186 bits
Score difference with first non-orthologous sequence - C.immitis:87 P.ramorum:90

J3K2H8              	100.00%		H3GCD2              	100.00%
Bootstrap support for J3K2H8 as seed ortholog is 93%.
Bootstrap support for H3GCD2 as seed ortholog is 98%.

Group of orthologs #1095. Best score 186 bits
Score difference with first non-orthologous sequence - C.immitis:186 P.ramorum:186

J3K8J3              	100.00%		H3GAS9              	100.00%
Bootstrap support for J3K8J3 as seed ortholog is 100%.
Bootstrap support for H3GAS9 as seed ortholog is 100%.

Group of orthologs #1096. Best score 186 bits
Score difference with first non-orthologous sequence - C.immitis:186 P.ramorum:186

I9NPS9              	100.00%		H3GR42              	100.00%
Bootstrap support for I9NPS9 as seed ortholog is 100%.
Bootstrap support for H3GR42 as seed ortholog is 100%.

Group of orthologs #1097. Best score 186 bits
Score difference with first non-orthologous sequence - C.immitis:186 P.ramorum:186

J3K3S7              	100.00%		H3GNT1              	100.00%
Bootstrap support for J3K3S7 as seed ortholog is 100%.
Bootstrap support for H3GNT1 as seed ortholog is 100%.

Group of orthologs #1098. Best score 186 bits
Score difference with first non-orthologous sequence - C.immitis:186 P.ramorum:105

J3K5A3              	100.00%		H3GSN3              	100.00%
Bootstrap support for J3K5A3 as seed ortholog is 100%.
Bootstrap support for H3GSN3 as seed ortholog is 98%.

Group of orthologs #1099. Best score 186 bits
Score difference with first non-orthologous sequence - C.immitis:11 P.ramorum:186

J3KCN1              	100.00%		H3GNC9              	100.00%
Bootstrap support for J3KCN1 as seed ortholog is 71%.
Alternative seed ortholog is J3KKZ9 (11 bits away from this cluster)
Bootstrap support for H3GNC9 as seed ortholog is 100%.

Group of orthologs #1100. Best score 186 bits
Score difference with first non-orthologous sequence - C.immitis:186 P.ramorum:186

J3K8V7              	100.00%		H3GUP5              	100.00%
Bootstrap support for J3K8V7 as seed ortholog is 100%.
Bootstrap support for H3GUP5 as seed ortholog is 100%.

Group of orthologs #1101. Best score 186 bits
Score difference with first non-orthologous sequence - C.immitis:82 P.ramorum:96

J3KHG0              	100.00%		H3GU33              	100.00%
Bootstrap support for J3KHG0 as seed ortholog is 99%.
Bootstrap support for H3GU33 as seed ortholog is 99%.

Group of orthologs #1102. Best score 185 bits
Score difference with first non-orthologous sequence - C.immitis:185 P.ramorum:185

J3KG05              	100.00%		H3GJH6              	100.00%
                    	       		H3GJH7              	73.70%
                    	       		H3GJH2              	67.49%
                    	       		H3GJH1              	61.71%
                    	       		H3GJH0              	56.43%
                    	       		H3GJG0              	50.94%
                    	       		H3GJH3              	49.13%
                    	       		H3GJF9              	48.34%
                    	       		H3GJG1              	47.11%
                    	       		H3H251              	47.11%
                    	       		H3GX59              	46.53%
                    	       		H3GJF8              	46.46%
                    	       		H3GXR7              	44.08%
                    	       		H3GES0              	43.14%
                    	       		H3GIQ7              	39.88%
                    	       		H3GZ89              	39.02%
                    	       		H3H5U1              	34.75%
                    	       		H3H9Y0              	15.17%
Bootstrap support for J3KG05 as seed ortholog is 100%.
Bootstrap support for H3GJH6 as seed ortholog is 100%.

Group of orthologs #1103. Best score 185 bits
Score difference with first non-orthologous sequence - C.immitis:185 P.ramorum:24

J3KJ98              	100.00%		H3H827              	100.00%
J3K043              	35.29%		H3GQK2              	87.92%
                    	       		H3GNT6              	60.20%
                    	       		H3GNN8              	58.28%
                    	       		H3H7Z9              	57.43%
                    	       		H3GNN7              	55.58%
                    	       		H3GNN6              	53.38%
                    	       		H3GZG0              	51.17%
                    	       		H3G931              	50.46%
                    	       		H3GNN5              	49.32%
                    	       		H3GMS5              	45.06%
                    	       		H3H565              	30.14%
                    	       		H3H2D6              	28.36%
                    	       		H3GJ22              	27.08%
                    	       		H3H963              	20.97%
Bootstrap support for J3KJ98 as seed ortholog is 100%.
Bootstrap support for H3H827 as seed ortholog is 65%.
Alternative seed ortholog is H3GVG2 (24 bits away from this cluster)

Group of orthologs #1104. Best score 185 bits
Score difference with first non-orthologous sequence - C.immitis:185 P.ramorum:102

J3KH83              	100.00%		H3GSN2              	100.00%
                    	       		H3GSN0              	40.41%
                    	       		H3GSM9              	39.80%
                    	       		H3GSN9              	38.98%
                    	       		H3GSN1              	37.77%
Bootstrap support for J3KH83 as seed ortholog is 100%.
Bootstrap support for H3GSN2 as seed ortholog is 98%.

Group of orthologs #1105. Best score 185 bits
Score difference with first non-orthologous sequence - C.immitis:185 P.ramorum:185

J3KDI7              	100.00%		H3GME6              	100.00%
Bootstrap support for J3KDI7 as seed ortholog is 100%.
Bootstrap support for H3GME6 as seed ortholog is 100%.

Group of orthologs #1106. Best score 185 bits
Score difference with first non-orthologous sequence - C.immitis:185 P.ramorum:185

J3KH66              	100.00%		H3GTE2              	100.00%
Bootstrap support for J3KH66 as seed ortholog is 100%.
Bootstrap support for H3GTE2 as seed ortholog is 100%.

Group of orthologs #1107. Best score 184 bits
Score difference with first non-orthologous sequence - C.immitis:135 P.ramorum:184

J3K339              	100.00%		H3G913              	100.00%
Bootstrap support for J3K339 as seed ortholog is 99%.
Bootstrap support for H3G913 as seed ortholog is 100%.

Group of orthologs #1108. Best score 184 bits
Score difference with first non-orthologous sequence - C.immitis:184 P.ramorum:184

J3K5F5              	100.00%		H3GBV9              	100.00%
Bootstrap support for J3K5F5 as seed ortholog is 100%.
Bootstrap support for H3GBV9 as seed ortholog is 100%.

Group of orthologs #1109. Best score 184 bits
Score difference with first non-orthologous sequence - C.immitis:184 P.ramorum:184

J3KBV7              	100.00%		H3GC59              	100.00%
Bootstrap support for J3KBV7 as seed ortholog is 100%.
Bootstrap support for H3GC59 as seed ortholog is 100%.

Group of orthologs #1110. Best score 184 bits
Score difference with first non-orthologous sequence - C.immitis:184 P.ramorum:184

J3K8J0              	100.00%		H3GGK3              	100.00%
Bootstrap support for J3K8J0 as seed ortholog is 100%.
Bootstrap support for H3GGK3 as seed ortholog is 100%.

Group of orthologs #1111. Best score 184 bits
Score difference with first non-orthologous sequence - C.immitis:184 P.ramorum:107

J3K4F8              	100.00%		H3GYM5              	100.00%
Bootstrap support for J3K4F8 as seed ortholog is 100%.
Bootstrap support for H3GYM5 as seed ortholog is 99%.

Group of orthologs #1112. Best score 184 bits
Score difference with first non-orthologous sequence - C.immitis:184 P.ramorum:184

Q1E4Z3              	100.00%		H3H0U9              	100.00%
Bootstrap support for Q1E4Z3 as seed ortholog is 100%.
Bootstrap support for H3H0U9 as seed ortholog is 100%.

Group of orthologs #1113. Best score 184 bits
Score difference with first non-orthologous sequence - C.immitis:184 P.ramorum:184

J3KCL0              	100.00%		H3HBA4              	100.00%
Bootstrap support for J3KCL0 as seed ortholog is 100%.
Bootstrap support for H3HBA4 as seed ortholog is 100%.

Group of orthologs #1114. Best score 183 bits
Score difference with first non-orthologous sequence - C.immitis:183 P.ramorum:183

J3K5X8              	100.00%		H3HEG5              	100.00%
                    	       		H3H5V4              	31.14%
                    	       		H3GN35              	30.17%
                    	       		H3GG96              	27.01%
                    	       		H3GU87              	17.27%
Bootstrap support for J3K5X8 as seed ortholog is 100%.
Bootstrap support for H3HEG5 as seed ortholog is 100%.

Group of orthologs #1115. Best score 183 bits
Score difference with first non-orthologous sequence - C.immitis:109 P.ramorum:112

J3KKA3              	100.00%		H3GHR3              	100.00%
Bootstrap support for J3KKA3 as seed ortholog is 99%.
Bootstrap support for H3GHR3 as seed ortholog is 98%.

Group of orthologs #1116. Best score 183 bits
Score difference with first non-orthologous sequence - C.immitis:183 P.ramorum:183

J3KFK1              	100.00%		H3GNV8              	100.00%
Bootstrap support for J3KFK1 as seed ortholog is 100%.
Bootstrap support for H3GNV8 as seed ortholog is 100%.

Group of orthologs #1117. Best score 183 bits
Score difference with first non-orthologous sequence - C.immitis:183 P.ramorum:55

J3KI04              	100.00%		H3GSS2              	100.00%
Bootstrap support for J3KI04 as seed ortholog is 100%.
Bootstrap support for H3GSS2 as seed ortholog is 92%.

Group of orthologs #1118. Best score 183 bits
Score difference with first non-orthologous sequence - C.immitis:183 P.ramorum:183

J3KK59              	100.00%		H3GXW4              	100.00%
Bootstrap support for J3KK59 as seed ortholog is 100%.
Bootstrap support for H3GXW4 as seed ortholog is 100%.

Group of orthologs #1119. Best score 182 bits
Score difference with first non-orthologous sequence - C.immitis:182 P.ramorum:182

Q1E5N1              	100.00%		H3GAL3              	100.00%
                    	       		H3GAL2              	88.30%
Bootstrap support for Q1E5N1 as seed ortholog is 100%.
Bootstrap support for H3GAL3 as seed ortholog is 100%.

Group of orthologs #1120. Best score 182 bits
Score difference with first non-orthologous sequence - C.immitis:182 P.ramorum:182

J3K0V6              	100.00%		H3G4Z2              	100.00%
Bootstrap support for J3K0V6 as seed ortholog is 100%.
Bootstrap support for H3G4Z2 as seed ortholog is 100%.

Group of orthologs #1121. Best score 182 bits
Score difference with first non-orthologous sequence - C.immitis:182 P.ramorum:83

J3K1R3              	100.00%		H3G8P5              	100.00%
Bootstrap support for J3K1R3 as seed ortholog is 100%.
Bootstrap support for H3G8P5 as seed ortholog is 99%.

Group of orthologs #1122. Best score 182 bits
Score difference with first non-orthologous sequence - C.immitis:116 P.ramorum:51

I9XM10              	100.00%		H3GDY8              	100.00%
Bootstrap support for I9XM10 as seed ortholog is 99%.
Bootstrap support for H3GDY8 as seed ortholog is 94%.

Group of orthologs #1123. Best score 182 bits
Score difference with first non-orthologous sequence - C.immitis:182 P.ramorum:182

J3K6Z8              	100.00%		H3HB82              	100.00%
Bootstrap support for J3K6Z8 as seed ortholog is 100%.
Bootstrap support for H3HB82 as seed ortholog is 100%.

Group of orthologs #1124. Best score 182 bits
Score difference with first non-orthologous sequence - C.immitis:182 P.ramorum:7

J3KFA3              	100.00%		H3H3Y5              	100.00%
Bootstrap support for J3KFA3 as seed ortholog is 100%.
Bootstrap support for H3H3Y5 as seed ortholog is 38%.
Alternative seed ortholog is H3GYJ3 (7 bits away from this cluster)

Group of orthologs #1125. Best score 181 bits
Score difference with first non-orthologous sequence - C.immitis:34 P.ramorum:72

J3KG41              	100.00%		H3G9G5              	100.00%
                    	       		H3GAV1              	59.78%
                    	       		H3GRI0              	12.72%
                    	       		H3G9U0              	12.56%
                    	       		H3G8G9              	12.40%
                    	       		H3GKD1              	12.40%
                    	       		H3GKD0              	12.40%
                    	       		H3GJI8              	12.40%
                    	       		H3H352              	12.40%
                    	       		H3H353              	12.40%
                    	       		H3H358              	12.24%
                    	       		H3H348              	12.24%
                    	       		H3G9A9              	11.76%
                    	       		H3GZ98              	11.29%
                    	       		H3GI21              	11.13%
                    	       		H3H350              	9.86%
                    	       		H3H1G2              	9.38%
                    	       		H3GYG3              	9.06%
                    	       		H3GHN4              	8.59%
                    	       		H3GMX9              	8.59%
                    	       		H3GDC9              	7.79%
                    	       		H3H349              	6.84%
                    	       		H3GP60              	6.52%
                    	       		H3GP61              	6.20%
                    	       		H3H9M6              	5.72%
Bootstrap support for J3KG41 as seed ortholog is 72%.
Alternative seed ortholog is J3KCB0 (34 bits away from this cluster)
Bootstrap support for H3G9G5 as seed ortholog is 96%.

Group of orthologs #1126. Best score 181 bits
Score difference with first non-orthologous sequence - C.immitis:181 P.ramorum:181

Q1E803              	100.00%		H3G6L3              	100.00%
J3KJI5              	43.27%		H3G8A0              	96.06%
Bootstrap support for Q1E803 as seed ortholog is 100%.
Bootstrap support for H3G6L3 as seed ortholog is 100%.

Group of orthologs #1127. Best score 181 bits
Score difference with first non-orthologous sequence - C.immitis:181 P.ramorum:62

J3K6P2              	100.00%		H3GA95              	100.00%
J3K6T6              	50.78%		
Bootstrap support for J3K6P2 as seed ortholog is 100%.
Bootstrap support for H3GA95 as seed ortholog is 90%.

Group of orthologs #1128. Best score 181 bits
Score difference with first non-orthologous sequence - C.immitis:181 P.ramorum:181

J3KDJ7              	100.00%		H3G6D6              	100.00%
Bootstrap support for J3KDJ7 as seed ortholog is 100%.
Bootstrap support for H3G6D6 as seed ortholog is 100%.

Group of orthologs #1129. Best score 181 bits
Score difference with first non-orthologous sequence - C.immitis:181 P.ramorum:181

J3K832              	100.00%		H3GCM0              	100.00%
Bootstrap support for J3K832 as seed ortholog is 100%.
Bootstrap support for H3GCM0 as seed ortholog is 100%.

Group of orthologs #1130. Best score 181 bits
Score difference with first non-orthologous sequence - C.immitis:181 P.ramorum:49

J3K6B6              	100.00%		H3GSC6              	100.00%
Bootstrap support for J3K6B6 as seed ortholog is 100%.
Bootstrap support for H3GSC6 as seed ortholog is 86%.

Group of orthologs #1131. Best score 181 bits
Score difference with first non-orthologous sequence - C.immitis:181 P.ramorum:95

J3KK09              	100.00%		H3GWA9              	100.00%
Bootstrap support for J3KK09 as seed ortholog is 100%.
Bootstrap support for H3GWA9 as seed ortholog is 99%.

Group of orthologs #1132. Best score 180 bits
Score difference with first non-orthologous sequence - C.immitis:180 P.ramorum:180

J3KLN1              	100.00%		H3GH59              	100.00%
                    	       		H3GH67              	66.00%
                    	       		H3GH68              	62.20%
                    	       		H3GH60              	61.60%
                    	       		H3GH66              	53.00%
                    	       		H3G9G1              	42.20%
                    	       		H3GH61              	30.80%
                    	       		H3G539              	22.20%
Bootstrap support for J3KLN1 as seed ortholog is 100%.
Bootstrap support for H3GH59 as seed ortholog is 100%.

Group of orthologs #1133. Best score 180 bits
Score difference with first non-orthologous sequence - C.immitis:180 P.ramorum:180

J3KAY7              	20.90%		H3G779              	100.00%
J3KJG3              	100.00%		H3GFB2              	100.00%
J3KE41              	13.43%		
Bootstrap support for J3KJG3 as seed ortholog is 100%.
Bootstrap support for H3G779 as seed ortholog is 100%.
Bootstrap support for H3GFB2 as seed ortholog is 100%.

Group of orthologs #1134. Best score 180 bits
Score difference with first non-orthologous sequence - C.immitis:180 P.ramorum:81

J3KMC9              	100.00%		H3GN73              	100.00%
                    	       		H3GN83              	54.66%
                    	       		H3GN80              	39.97%
Bootstrap support for J3KMC9 as seed ortholog is 100%.
Bootstrap support for H3GN73 as seed ortholog is 98%.

Group of orthologs #1135. Best score 180 bits
Score difference with first non-orthologous sequence - C.immitis:180 P.ramorum:56

J3KL39              	100.00%		H3GAG2              	100.00%
                    	       		H3GAV4              	16.29%
Bootstrap support for J3KL39 as seed ortholog is 100%.
Bootstrap support for H3GAG2 as seed ortholog is 97%.

Group of orthologs #1136. Best score 180 bits
Score difference with first non-orthologous sequence - C.immitis:180 P.ramorum:180

J3K6X2              	100.00%		H3GAP3              	100.00%
Bootstrap support for J3K6X2 as seed ortholog is 100%.
Bootstrap support for H3GAP3 as seed ortholog is 100%.

Group of orthologs #1137. Best score 180 bits
Score difference with first non-orthologous sequence - C.immitis:180 P.ramorum:180

J3K851              	100.00%		H3GHM1              	100.00%
Bootstrap support for J3K851 as seed ortholog is 100%.
Bootstrap support for H3GHM1 as seed ortholog is 100%.

Group of orthologs #1138. Best score 180 bits
Score difference with first non-orthologous sequence - C.immitis:180 P.ramorum:66

Q1DWN4              	100.00%		H3G7G2              	100.00%
Bootstrap support for Q1DWN4 as seed ortholog is 100%.
Bootstrap support for H3G7G2 as seed ortholog is 94%.

Group of orthologs #1139. Best score 180 bits
Score difference with first non-orthologous sequence - C.immitis:180 P.ramorum:180

Q1EAH9              	100.00%		H3GA08              	100.00%
Bootstrap support for Q1EAH9 as seed ortholog is 100%.
Bootstrap support for H3GA08 as seed ortholog is 100%.

Group of orthologs #1140. Best score 180 bits
Score difference with first non-orthologous sequence - C.immitis:180 P.ramorum:180

J3KFA8              	100.00%		H3GVQ4              	100.00%
Bootstrap support for J3KFA8 as seed ortholog is 100%.
Bootstrap support for H3GVQ4 as seed ortholog is 100%.

Group of orthologs #1141. Best score 179 bits
Score difference with first non-orthologous sequence - C.immitis:179 P.ramorum:179

I9NNZ3              	100.00%		H3GFG5              	100.00%
J3KDX3              	17.19%		
Bootstrap support for I9NNZ3 as seed ortholog is 100%.
Bootstrap support for H3GFG5 as seed ortholog is 100%.

Group of orthologs #1142. Best score 179 bits
Score difference with first non-orthologous sequence - C.immitis:14 P.ramorum:84

J3K327              	100.00%		H3G8N2              	100.00%
                    	       		H3GI43              	18.83%
Bootstrap support for J3K327 as seed ortholog is 65%.
Alternative seed ortholog is I9NSL6 (14 bits away from this cluster)
Bootstrap support for H3G8N2 as seed ortholog is 98%.

Group of orthologs #1143. Best score 179 bits
Score difference with first non-orthologous sequence - C.immitis:179 P.ramorum:179

J3K8T7              	100.00%		H3G5K1              	100.00%
Bootstrap support for J3K8T7 as seed ortholog is 100%.
Bootstrap support for H3G5K1 as seed ortholog is 100%.

Group of orthologs #1144. Best score 179 bits
Score difference with first non-orthologous sequence - C.immitis:179 P.ramorum:179

Q1DU75              	100.00%		H3GFX6              	100.00%
Bootstrap support for Q1DU75 as seed ortholog is 100%.
Bootstrap support for H3GFX6 as seed ortholog is 100%.

Group of orthologs #1145. Best score 178 bits
Score difference with first non-orthologous sequence - C.immitis:178 P.ramorum:178

J3KGH1              	100.00%		H3G4Y0              	100.00%
Bootstrap support for J3KGH1 as seed ortholog is 100%.
Bootstrap support for H3G4Y0 as seed ortholog is 100%.

Group of orthologs #1146. Best score 178 bits
Score difference with first non-orthologous sequence - C.immitis:178 P.ramorum:178

J3KGL7              	100.00%		H3G7K5              	100.00%
Bootstrap support for J3KGL7 as seed ortholog is 100%.
Bootstrap support for H3G7K5 as seed ortholog is 100%.

Group of orthologs #1147. Best score 178 bits
Score difference with first non-orthologous sequence - C.immitis:178 P.ramorum:178

J3KHP9              	100.00%		H3G9W2              	100.00%
Bootstrap support for J3KHP9 as seed ortholog is 100%.
Bootstrap support for H3G9W2 as seed ortholog is 100%.

Group of orthologs #1148. Best score 178 bits
Score difference with first non-orthologous sequence - C.immitis:178 P.ramorum:178

J3K5T4              	100.00%		H3GML7              	100.00%
Bootstrap support for J3K5T4 as seed ortholog is 100%.
Bootstrap support for H3GML7 as seed ortholog is 100%.

Group of orthologs #1149. Best score 178 bits
Score difference with first non-orthologous sequence - C.immitis:178 P.ramorum:178

J3K2C3              	100.00%		H3GUH8              	100.00%
Bootstrap support for J3K2C3 as seed ortholog is 100%.
Bootstrap support for H3GUH8 as seed ortholog is 100%.

Group of orthologs #1150. Best score 178 bits
Score difference with first non-orthologous sequence - C.immitis:102 P.ramorum:178

J3KCV1              	100.00%		H3GMN5              	100.00%
Bootstrap support for J3KCV1 as seed ortholog is 99%.
Bootstrap support for H3GMN5 as seed ortholog is 100%.

Group of orthologs #1151. Best score 178 bits
Score difference with first non-orthologous sequence - C.immitis:67 P.ramorum:178

J3KE16              	100.00%		H3GLL0              	100.00%
Bootstrap support for J3KE16 as seed ortholog is 93%.
Bootstrap support for H3GLL0 as seed ortholog is 100%.

Group of orthologs #1152. Best score 178 bits
Score difference with first non-orthologous sequence - C.immitis:20 P.ramorum:178

J3KE67              	100.00%		H3HBY1              	100.00%
Bootstrap support for J3KE67 as seed ortholog is 74%.
Alternative seed ortholog is J3K418 (20 bits away from this cluster)
Bootstrap support for H3HBY1 as seed ortholog is 100%.

Group of orthologs #1153. Best score 177 bits
Score difference with first non-orthologous sequence - C.immitis:177 P.ramorum:177

J3KK01              	100.00%		H3G8T7              	100.00%
                    	       		H3G8T6              	71.64%
Bootstrap support for J3KK01 as seed ortholog is 100%.
Bootstrap support for H3G8T7 as seed ortholog is 100%.

Group of orthologs #1154. Best score 177 bits
Score difference with first non-orthologous sequence - C.immitis:177 P.ramorum:177

J3KEA4              	100.00%		H3GKQ0              	100.00%
                    	       		H3HA78              	100.00%
Bootstrap support for J3KEA4 as seed ortholog is 100%.
Bootstrap support for H3GKQ0 as seed ortholog is 100%.
Bootstrap support for H3HA78 as seed ortholog is 100%.

Group of orthologs #1155. Best score 177 bits
Score difference with first non-orthologous sequence - C.immitis:177 P.ramorum:177

I9NNA9              	100.00%		H3GFF5              	100.00%
Bootstrap support for I9NNA9 as seed ortholog is 100%.
Bootstrap support for H3GFF5 as seed ortholog is 100%.

Group of orthologs #1156. Best score 177 bits
Score difference with first non-orthologous sequence - C.immitis:177 P.ramorum:177

J3K552              	100.00%		H3GAQ0              	100.00%
Bootstrap support for J3K552 as seed ortholog is 100%.
Bootstrap support for H3GAQ0 as seed ortholog is 100%.

Group of orthologs #1157. Best score 177 bits
Score difference with first non-orthologous sequence - C.immitis:177 P.ramorum:177

J3KFS0              	100.00%		H3GN89              	100.00%
Bootstrap support for J3KFS0 as seed ortholog is 100%.
Bootstrap support for H3GN89 as seed ortholog is 100%.

Group of orthologs #1158. Best score 177 bits
Score difference with first non-orthologous sequence - C.immitis:177 P.ramorum:177

J3KBH8              	100.00%		H3GTH9              	100.00%
Bootstrap support for J3KBH8 as seed ortholog is 100%.
Bootstrap support for H3GTH9 as seed ortholog is 100%.

Group of orthologs #1159. Best score 177 bits
Score difference with first non-orthologous sequence - C.immitis:177 P.ramorum:177

J3KIL3              	100.00%		H3GM70              	100.00%
Bootstrap support for J3KIL3 as seed ortholog is 100%.
Bootstrap support for H3GM70 as seed ortholog is 100%.

Group of orthologs #1160. Best score 177 bits
Score difference with first non-orthologous sequence - C.immitis:177 P.ramorum:177

I9XJV4              	100.00%		H3HBH9              	100.00%
Bootstrap support for I9XJV4 as seed ortholog is 100%.
Bootstrap support for H3HBH9 as seed ortholog is 100%.

Group of orthologs #1161. Best score 176 bits
Score difference with first non-orthologous sequence - C.immitis:176 P.ramorum:176

J3KH45              	100.00%		H3GFE6              	100.00%
J0HG53              	5.47%		H3GTS8              	18.72%
Bootstrap support for J3KH45 as seed ortholog is 100%.
Bootstrap support for H3GFE6 as seed ortholog is 100%.

Group of orthologs #1162. Best score 176 bits
Score difference with first non-orthologous sequence - C.immitis:176 P.ramorum:176

J3K2P8              	100.00%		H3GE88              	100.00%
                    	       		H3G9T4              	7.45%
Bootstrap support for J3K2P8 as seed ortholog is 100%.
Bootstrap support for H3GE88 as seed ortholog is 100%.

Group of orthologs #1163. Best score 176 bits
Score difference with first non-orthologous sequence - C.immitis:176 P.ramorum:103

J0HF00              	100.00%		H3G9W3              	100.00%
Bootstrap support for J0HF00 as seed ortholog is 100%.
Bootstrap support for H3G9W3 as seed ortholog is 99%.

Group of orthologs #1164. Best score 176 bits
Score difference with first non-orthologous sequence - C.immitis:176 P.ramorum:176

J3K4R3              	100.00%		H3G610              	100.00%
Bootstrap support for J3K4R3 as seed ortholog is 100%.
Bootstrap support for H3G610 as seed ortholog is 100%.

Group of orthologs #1165. Best score 176 bits
Score difference with first non-orthologous sequence - C.immitis:176 P.ramorum:176

J3K8A2              	100.00%		H3G6D8              	100.00%
Bootstrap support for J3K8A2 as seed ortholog is 100%.
Bootstrap support for H3G6D8 as seed ortholog is 100%.

Group of orthologs #1166. Best score 175 bits
Score difference with first non-orthologous sequence - C.immitis:175 P.ramorum:117

J3KG81              	100.00%		H3GQF2              	100.00%
                    	       		H3GR59              	73.14%
                    	       		H3H1Q0              	70.69%
                    	       		H3GP17              	65.27%
                    	       		H3GR68              	57.31%
Bootstrap support for J3KG81 as seed ortholog is 100%.
Bootstrap support for H3GQF2 as seed ortholog is 97%.

Group of orthologs #1167. Best score 175 bits
Score difference with first non-orthologous sequence - C.immitis:175 P.ramorum:175

J3KKH0              	100.00%		H3GGG7              	100.00%
                    	       		H3GG89              	51.14%
                    	       		H3H6U6              	29.12%
Bootstrap support for J3KKH0 as seed ortholog is 100%.
Bootstrap support for H3GGG7 as seed ortholog is 100%.

Group of orthologs #1168. Best score 175 bits
Score difference with first non-orthologous sequence - C.immitis:175 P.ramorum:175

J3K3S2              	100.00%		H3GAQ2              	100.00%
Bootstrap support for J3K3S2 as seed ortholog is 100%.
Bootstrap support for H3GAQ2 as seed ortholog is 100%.

Group of orthologs #1169. Best score 175 bits
Score difference with first non-orthologous sequence - C.immitis:175 P.ramorum:175

J3K847              	100.00%		H3G7S4              	100.00%
Bootstrap support for J3K847 as seed ortholog is 100%.
Bootstrap support for H3G7S4 as seed ortholog is 100%.

Group of orthologs #1170. Best score 175 bits
Score difference with first non-orthologous sequence - C.immitis:73 P.ramorum:89

J3KC71              	100.00%		H3G981              	100.00%
Bootstrap support for J3KC71 as seed ortholog is 98%.
Bootstrap support for H3G981 as seed ortholog is 99%.

Group of orthologs #1171. Best score 175 bits
Score difference with first non-orthologous sequence - C.immitis:175 P.ramorum:175

J3K2L5              	100.00%		H3GWT2              	100.00%
Bootstrap support for J3K2L5 as seed ortholog is 100%.
Bootstrap support for H3GWT2 as seed ortholog is 100%.

Group of orthologs #1172. Best score 175 bits
Score difference with first non-orthologous sequence - C.immitis:175 P.ramorum:175

J3K270              	100.00%		H3H2T7              	100.00%
Bootstrap support for J3K270 as seed ortholog is 100%.
Bootstrap support for H3H2T7 as seed ortholog is 100%.

Group of orthologs #1173. Best score 175 bits
Score difference with first non-orthologous sequence - C.immitis:175 P.ramorum:111

J0HFU7              	100.00%		H3HBJ2              	100.00%
Bootstrap support for J0HFU7 as seed ortholog is 100%.
Bootstrap support for H3HBJ2 as seed ortholog is 99%.

Group of orthologs #1174. Best score 175 bits
Score difference with first non-orthologous sequence - C.immitis:175 P.ramorum:175

J3KGJ4              	100.00%		H3GV87              	100.00%
Bootstrap support for J3KGJ4 as seed ortholog is 100%.
Bootstrap support for H3GV87 as seed ortholog is 100%.

Group of orthologs #1175. Best score 175 bits
Score difference with first non-orthologous sequence - C.immitis:175 P.ramorum:175

Q1DPD9              	100.00%		H3GS44              	100.00%
Bootstrap support for Q1DPD9 as seed ortholog is 100%.
Bootstrap support for H3GS44 as seed ortholog is 100%.

Group of orthologs #1176. Best score 174 bits
Score difference with first non-orthologous sequence - C.immitis:174 P.ramorum:174

J3K9H0              	100.00%		H3GJP0              	100.00%
                    	       		H3GJN4              	56.28%
                    	       		H3GJN5              	55.84%
                    	       		H3GJN3              	54.83%
                    	       		H3G906              	50.07%
                    	       		H3GMN4              	19.77%
Bootstrap support for J3K9H0 as seed ortholog is 100%.
Bootstrap support for H3GJP0 as seed ortholog is 100%.

Group of orthologs #1177. Best score 174 bits
Score difference with first non-orthologous sequence - C.immitis:174 P.ramorum:174

J3KDI0              	100.00%		H3G899              	100.00%
Bootstrap support for J3KDI0 as seed ortholog is 100%.
Bootstrap support for H3G899 as seed ortholog is 100%.

Group of orthologs #1178. Best score 174 bits
Score difference with first non-orthologous sequence - C.immitis:174 P.ramorum:174

J3KI19              	100.00%		H3G971              	100.00%
Bootstrap support for J3KI19 as seed ortholog is 100%.
Bootstrap support for H3G971 as seed ortholog is 100%.

Group of orthologs #1179. Best score 173 bits
Score difference with first non-orthologous sequence - C.immitis:173 P.ramorum:173

J3KCQ0              	100.00%		H3GVS2              	100.00%
J3KL52              	37.86%		
J3KGD2              	33.97%		
Bootstrap support for J3KCQ0 as seed ortholog is 100%.
Bootstrap support for H3GVS2 as seed ortholog is 100%.

Group of orthologs #1180. Best score 173 bits
Score difference with first non-orthologous sequence - C.immitis:173 P.ramorum:173

I9NQG8              	100.00%		H3G8Y2              	100.00%
                    	       		H3H2X8              	47.47%
Bootstrap support for I9NQG8 as seed ortholog is 100%.
Bootstrap support for H3G8Y2 as seed ortholog is 100%.

Group of orthologs #1181. Best score 173 bits
Score difference with first non-orthologous sequence - C.immitis:173 P.ramorum:173

J3K1C6              	100.00%		H3GH37              	100.00%
Bootstrap support for J3K1C6 as seed ortholog is 100%.
Bootstrap support for H3GH37 as seed ortholog is 100%.

Group of orthologs #1182. Best score 173 bits
Score difference with first non-orthologous sequence - C.immitis:173 P.ramorum:173

J3K3E1              	100.00%		H3GJU1              	100.00%
Bootstrap support for J3K3E1 as seed ortholog is 100%.
Bootstrap support for H3GJU1 as seed ortholog is 100%.

Group of orthologs #1183. Best score 173 bits
Score difference with first non-orthologous sequence - C.immitis:34 P.ramorum:75

J3KBH2              	100.00%		H3GDE6              	100.00%
Bootstrap support for J3KBH2 as seed ortholog is 92%.
Bootstrap support for H3GDE6 as seed ortholog is 99%.

Group of orthologs #1184. Best score 173 bits
Score difference with first non-orthologous sequence - C.immitis:173 P.ramorum:173

J3K814              	100.00%		H3GHT1              	100.00%
Bootstrap support for J3K814 as seed ortholog is 100%.
Bootstrap support for H3GHT1 as seed ortholog is 100%.

Group of orthologs #1185. Best score 173 bits
Score difference with first non-orthologous sequence - C.immitis:173 P.ramorum:173

J3KCJ6              	100.00%		H3GIG8              	100.00%
Bootstrap support for J3KCJ6 as seed ortholog is 100%.
Bootstrap support for H3GIG8 as seed ortholog is 100%.

Group of orthologs #1186. Best score 173 bits
Score difference with first non-orthologous sequence - C.immitis:173 P.ramorum:173

J3KGT8              	100.00%		H3GS67              	100.00%
Bootstrap support for J3KGT8 as seed ortholog is 100%.
Bootstrap support for H3GS67 as seed ortholog is 100%.

Group of orthologs #1187. Best score 173 bits
Score difference with first non-orthologous sequence - C.immitis:173 P.ramorum:173

J3K703              	100.00%		H3HA86              	100.00%
Bootstrap support for J3K703 as seed ortholog is 100%.
Bootstrap support for H3HA86 as seed ortholog is 100%.

Group of orthologs #1188. Best score 173 bits
Score difference with first non-orthologous sequence - C.immitis:173 P.ramorum:173

J3KF18              	100.00%		H3H534              	100.00%
Bootstrap support for J3KF18 as seed ortholog is 100%.
Bootstrap support for H3H534 as seed ortholog is 100%.

Group of orthologs #1189. Best score 173 bits
Score difference with first non-orthologous sequence - C.immitis:173 P.ramorum:54

J3KDT4              	100.00%		H3HCW6              	100.00%
Bootstrap support for J3KDT4 as seed ortholog is 100%.
Bootstrap support for H3HCW6 as seed ortholog is 90%.

Group of orthologs #1190. Best score 172 bits
Score difference with first non-orthologous sequence - C.immitis:172 P.ramorum:172

J3KBE0              	100.00%		H3G5M6              	100.00%
Bootstrap support for J3KBE0 as seed ortholog is 100%.
Bootstrap support for H3G5M6 as seed ortholog is 100%.

Group of orthologs #1191. Best score 172 bits
Score difference with first non-orthologous sequence - C.immitis:172 P.ramorum:172

J3KA14              	100.00%		H3G956              	100.00%
Bootstrap support for J3KA14 as seed ortholog is 100%.
Bootstrap support for H3G956 as seed ortholog is 100%.

Group of orthologs #1192. Best score 172 bits
Score difference with first non-orthologous sequence - C.immitis:172 P.ramorum:172

J3K4E7              	100.00%		H3GNT3              	100.00%
Bootstrap support for J3K4E7 as seed ortholog is 100%.
Bootstrap support for H3GNT3 as seed ortholog is 100%.

Group of orthologs #1193. Best score 172 bits
Score difference with first non-orthologous sequence - C.immitis:40 P.ramorum:54

J3KM38              	100.00%		H3GI19              	100.00%
Bootstrap support for J3KM38 as seed ortholog is 91%.
Bootstrap support for H3GI19 as seed ortholog is 92%.

Group of orthologs #1194. Best score 172 bits
Score difference with first non-orthologous sequence - C.immitis:172 P.ramorum:172

J3K943              	100.00%		H3GXV0              	100.00%
Bootstrap support for J3K943 as seed ortholog is 100%.
Bootstrap support for H3GXV0 as seed ortholog is 100%.

Group of orthologs #1195. Best score 172 bits
Score difference with first non-orthologous sequence - C.immitis:172 P.ramorum:172

J0HF86              	100.00%		H3HCD6              	100.00%
Bootstrap support for J0HF86 as seed ortholog is 100%.
Bootstrap support for H3HCD6 as seed ortholog is 100%.

Group of orthologs #1196. Best score 171 bits
Score difference with first non-orthologous sequence - C.immitis:171 P.ramorum:34

J3KJY2              	100.00%		H3GFD8              	100.00%
J3K0A6              	15.51%		
Bootstrap support for J3KJY2 as seed ortholog is 100%.
Bootstrap support for H3GFD8 as seed ortholog is 87%.

Group of orthologs #1197. Best score 171 bits
Score difference with first non-orthologous sequence - C.immitis:171 P.ramorum:115

J3K1U2              	100.00%		H3GAY3              	100.00%
Bootstrap support for J3K1U2 as seed ortholog is 100%.
Bootstrap support for H3GAY3 as seed ortholog is 99%.

Group of orthologs #1198. Best score 171 bits
Score difference with first non-orthologous sequence - C.immitis:171 P.ramorum:171

J3K9F1              	100.00%		H3G9C3              	100.00%
Bootstrap support for J3K9F1 as seed ortholog is 100%.
Bootstrap support for H3G9C3 as seed ortholog is 100%.

Group of orthologs #1199. Best score 171 bits
Score difference with first non-orthologous sequence - C.immitis:171 P.ramorum:171

J3KGW8              	100.00%		H3G997              	100.00%
Bootstrap support for J3KGW8 as seed ortholog is 100%.
Bootstrap support for H3G997 as seed ortholog is 100%.

Group of orthologs #1200. Best score 171 bits
Score difference with first non-orthologous sequence - C.immitis:171 P.ramorum:171

J3KD19              	100.00%		H3H5E8              	100.00%
Bootstrap support for J3KD19 as seed ortholog is 100%.
Bootstrap support for H3H5E8 as seed ortholog is 100%.

Group of orthologs #1201. Best score 171 bits
Score difference with first non-orthologous sequence - C.immitis:171 P.ramorum:171

J3KKM6              	100.00%		H3GZX6              	100.00%
Bootstrap support for J3KKM6 as seed ortholog is 100%.
Bootstrap support for H3GZX6 as seed ortholog is 100%.

Group of orthologs #1202. Best score 170 bits
Score difference with first non-orthologous sequence - C.immitis:170 P.ramorum:170

J3K331              	100.00%		H3GNJ6              	100.00%
                    	       		H3GNJ7              	60.56%
                    	       		H3H858              	27.22%
                    	       		H3GNJ8              	23.33%
                    	       		H3GQA5              	18.89%
Bootstrap support for J3K331 as seed ortholog is 100%.
Bootstrap support for H3GNJ6 as seed ortholog is 100%.

Group of orthologs #1203. Best score 170 bits
Score difference with first non-orthologous sequence - C.immitis:170 P.ramorum:127

J3KI08              	100.00%		H3G7K1              	100.00%
                    	       		H3GWM2              	100.00%
Bootstrap support for J3KI08 as seed ortholog is 100%.
Bootstrap support for H3G7K1 as seed ortholog is 100%.
Bootstrap support for H3GWM2 as seed ortholog is 99%.

Group of orthologs #1204. Best score 170 bits
Score difference with first non-orthologous sequence - C.immitis:81 P.ramorum:170

J3K4A3              	100.00%		H3H080              	100.00%
                    	       		H3H829              	100.00%
Bootstrap support for J3K4A3 as seed ortholog is 98%.
Bootstrap support for H3H080 as seed ortholog is 100%.
Bootstrap support for H3H829 as seed ortholog is 100%.

Group of orthologs #1205. Best score 170 bits
Score difference with first non-orthologous sequence - C.immitis:170 P.ramorum:170

J3K6I2              	100.00%		H3G6E8              	100.00%
Bootstrap support for J3K6I2 as seed ortholog is 100%.
Bootstrap support for H3G6E8 as seed ortholog is 100%.

Group of orthologs #1206. Best score 170 bits
Score difference with first non-orthologous sequence - C.immitis:170 P.ramorum:170

J3KLZ8              	100.00%		H3GW85              	100.00%
Bootstrap support for J3KLZ8 as seed ortholog is 100%.
Bootstrap support for H3GW85 as seed ortholog is 100%.

Group of orthologs #1207. Best score 169 bits
Score difference with first non-orthologous sequence - C.immitis:101 P.ramorum:169

J3K6D4              	100.00%		H3GEL4              	100.00%
                    	       		H3GEL5              	30.80%
Bootstrap support for J3K6D4 as seed ortholog is 100%.
Bootstrap support for H3GEL4 as seed ortholog is 100%.

Group of orthologs #1208. Best score 169 bits
Score difference with first non-orthologous sequence - C.immitis:169 P.ramorum:169

J3K3E6              	100.00%		H3G7A8              	100.00%
Bootstrap support for J3K3E6 as seed ortholog is 100%.
Bootstrap support for H3G7A8 as seed ortholog is 100%.

Group of orthologs #1209. Best score 169 bits
Score difference with first non-orthologous sequence - C.immitis:4 P.ramorum:92

J3K9A2              	100.00%		H3GA22              	100.00%
Bootstrap support for J3K9A2 as seed ortholog is 55%.
Alternative seed ortholog is J3KAF5 (4 bits away from this cluster)
Bootstrap support for H3GA22 as seed ortholog is 99%.

Group of orthologs #1210. Best score 168 bits
Score difference with first non-orthologous sequence - C.immitis:57 P.ramorum:67

J3KHI1              	100.00%		H3GHR9              	100.00%
                    	       		H3GS49              	44.38%
                    	       		H3GS50              	42.16%
Bootstrap support for J3KHI1 as seed ortholog is 89%.
Bootstrap support for H3GHR9 as seed ortholog is 93%.

Group of orthologs #1211. Best score 168 bits
Score difference with first non-orthologous sequence - C.immitis:168 P.ramorum:168

J3KJA5              	100.00%		H3H571              	100.00%
J0HFY5              	5.95%		H3H8R3              	100.00%
Bootstrap support for J3KJA5 as seed ortholog is 100%.
Bootstrap support for H3H571 as seed ortholog is 100%.
Bootstrap support for H3H8R3 as seed ortholog is 100%.

Group of orthologs #1212. Best score 168 bits
Score difference with first non-orthologous sequence - C.immitis:168 P.ramorum:168

I9NPP6              	100.00%		H3GE17              	100.00%
                    	       		H3HBB0              	23.46%
Bootstrap support for I9NPP6 as seed ortholog is 100%.
Bootstrap support for H3GE17 as seed ortholog is 100%.

Group of orthologs #1213. Best score 168 bits
Score difference with first non-orthologous sequence - C.immitis:168 P.ramorum:14

J3KAG2              	100.00%		H3H1Q6              	100.00%
                    	       		H3GUF2              	15.26%
Bootstrap support for J3KAG2 as seed ortholog is 100%.
Bootstrap support for H3H1Q6 as seed ortholog is 59%.
Alternative seed ortholog is H3H0N0 (14 bits away from this cluster)

Group of orthologs #1214. Best score 168 bits
Score difference with first non-orthologous sequence - C.immitis:168 P.ramorum:168

J3K2I6              	100.00%		H3G7L3              	100.00%
Bootstrap support for J3K2I6 as seed ortholog is 100%.
Bootstrap support for H3G7L3 as seed ortholog is 100%.

Group of orthologs #1215. Best score 168 bits
Score difference with first non-orthologous sequence - C.immitis:57 P.ramorum:110

J3K445              	100.00%		H3GA88              	100.00%
Bootstrap support for J3K445 as seed ortholog is 97%.
Bootstrap support for H3GA88 as seed ortholog is 99%.

Group of orthologs #1216. Best score 168 bits
Score difference with first non-orthologous sequence - C.immitis:168 P.ramorum:168

I9NST2              	100.00%		H3GJ86              	100.00%
Bootstrap support for I9NST2 as seed ortholog is 100%.
Bootstrap support for H3GJ86 as seed ortholog is 100%.

Group of orthologs #1217. Best score 168 bits
Score difference with first non-orthologous sequence - C.immitis:168 P.ramorum:168

J3K8J9              	100.00%		H3GQX2              	100.00%
Bootstrap support for J3K8J9 as seed ortholog is 100%.
Bootstrap support for H3GQX2 as seed ortholog is 100%.

Group of orthologs #1218. Best score 168 bits
Score difference with first non-orthologous sequence - C.immitis:168 P.ramorum:168

J3KIQ3              	100.00%		H3GH50              	100.00%
Bootstrap support for J3KIQ3 as seed ortholog is 100%.
Bootstrap support for H3GH50 as seed ortholog is 100%.

Group of orthologs #1219. Best score 167 bits
Score difference with first non-orthologous sequence - C.immitis:34 P.ramorum:167

J3K5H4              	100.00%		H3GUN3              	100.00%
J3KLB7              	100.00%		H3GG30              	100.00%
J3KKG1              	20.40%		H3G8K9              	87.12%
J3K271              	9.54%		
Bootstrap support for J3K5H4 as seed ortholog is 80%.
Bootstrap support for J3KLB7 as seed ortholog is 48%.
Alternative seed ortholog is J3K5Z3 (34 bits away from this cluster)
Bootstrap support for H3GUN3 as seed ortholog is 100%.
Bootstrap support for H3GG30 as seed ortholog is 100%.

Group of orthologs #1220. Best score 167 bits
Score difference with first non-orthologous sequence - C.immitis:167 P.ramorum:82

J3K9Z6              	100.00%		H3H1P5              	100.00%
                    	       		H3H1N9              	17.63%
Bootstrap support for J3K9Z6 as seed ortholog is 100%.
Bootstrap support for H3H1P5 as seed ortholog is 94%.

Group of orthologs #1221. Best score 167 bits
Score difference with first non-orthologous sequence - C.immitis:99 P.ramorum:85

J3KL44              	100.00%		H3H4A2              	100.00%
                    	       		H3H3P5              	37.74%
Bootstrap support for J3KL44 as seed ortholog is 99%.
Bootstrap support for H3H4A2 as seed ortholog is 99%.

Group of orthologs #1222. Best score 167 bits
Score difference with first non-orthologous sequence - C.immitis:167 P.ramorum:167

J3K5G8              	100.00%		H3G8C5              	100.00%
Bootstrap support for J3K5G8 as seed ortholog is 100%.
Bootstrap support for H3G8C5 as seed ortholog is 100%.

Group of orthologs #1223. Best score 167 bits
Score difference with first non-orthologous sequence - C.immitis:167 P.ramorum:167

J3K9G8              	100.00%		H3GJT5              	100.00%
Bootstrap support for J3K9G8 as seed ortholog is 100%.
Bootstrap support for H3GJT5 as seed ortholog is 100%.

Group of orthologs #1224. Best score 166 bits
Score difference with first non-orthologous sequence - C.immitis:33 P.ramorum:45

J3KJZ9              	100.00%		H3GZ43              	100.00%
                    	       		H3GMG9              	5.81%
Bootstrap support for J3KJZ9 as seed ortholog is 73%.
Alternative seed ortholog is J3KE31 (33 bits away from this cluster)
Bootstrap support for H3GZ43 as seed ortholog is 82%.

Group of orthologs #1225. Best score 166 bits
Score difference with first non-orthologous sequence - C.immitis:166 P.ramorum:166

I9NSI3              	100.00%		H3GVF6              	100.00%
Bootstrap support for I9NSI3 as seed ortholog is 100%.
Bootstrap support for H3GVF6 as seed ortholog is 100%.

Group of orthologs #1226. Best score 166 bits
Score difference with first non-orthologous sequence - C.immitis:90 P.ramorum:22

J3KCP1              	100.00%		H3GTD1              	100.00%
Bootstrap support for J3KCP1 as seed ortholog is 99%.
Bootstrap support for H3GTD1 as seed ortholog is 69%.
Alternative seed ortholog is H3G5J1 (22 bits away from this cluster)

Group of orthologs #1227. Best score 166 bits
Score difference with first non-orthologous sequence - C.immitis:166 P.ramorum:166

J3K2N5              	100.00%		H3H7R5              	100.00%
Bootstrap support for J3K2N5 as seed ortholog is 100%.
Bootstrap support for H3H7R5 as seed ortholog is 100%.

Group of orthologs #1228. Best score 166 bits
Score difference with first non-orthologous sequence - C.immitis:82 P.ramorum:42

Q1E7P0              	100.00%		H3GXC9              	100.00%
Bootstrap support for Q1E7P0 as seed ortholog is 98%.
Bootstrap support for H3GXC9 as seed ortholog is 83%.

Group of orthologs #1229. Best score 166 bits
Score difference with first non-orthologous sequence - C.immitis:166 P.ramorum:166

J3KD35              	100.00%		H3HDW2              	100.00%
Bootstrap support for J3KD35 as seed ortholog is 100%.
Bootstrap support for H3HDW2 as seed ortholog is 100%.

Group of orthologs #1230. Best score 165 bits
Score difference with first non-orthologous sequence - C.immitis:49 P.ramorum:57

J0HFA7              	100.00%		H3GQR4              	100.00%
                    	       		H3GQE4              	13.30%
                    	       		H3GJU6              	12.70%
                    	       		H3GN81              	11.81%
                    	       		H3H377              	9.06%
                    	       		H3GUL7              	8.88%
                    	       		H3GVR6              	6.38%
Bootstrap support for J0HFA7 as seed ortholog is 75%.
Bootstrap support for H3GQR4 as seed ortholog is 85%.

Group of orthologs #1231. Best score 165 bits
Score difference with first non-orthologous sequence - C.immitis:35 P.ramorum:96

J3KLH4              	100.00%		H3H170              	100.00%
                    	       		H3GEM9              	7.93%
Bootstrap support for J3KLH4 as seed ortholog is 73%.
Alternative seed ortholog is J3K1S8 (35 bits away from this cluster)
Bootstrap support for H3H170 as seed ortholog is 97%.

Group of orthologs #1232. Best score 165 bits
Score difference with first non-orthologous sequence - C.immitis:98 P.ramorum:89

J3KIH0              	100.00%		H3HAS1              	100.00%
                    	       		H3HDE3              	6.11%
Bootstrap support for J3KIH0 as seed ortholog is 99%.
Bootstrap support for H3HAS1 as seed ortholog is 95%.

Group of orthologs #1233. Best score 165 bits
Score difference with first non-orthologous sequence - C.immitis:165 P.ramorum:165

J3KB14              	100.00%		H3G8X7              	100.00%
Bootstrap support for J3KB14 as seed ortholog is 100%.
Bootstrap support for H3G8X7 as seed ortholog is 100%.

Group of orthologs #1234. Best score 165 bits
Score difference with first non-orthologous sequence - C.immitis:37 P.ramorum:165

J3KBQ7              	100.00%		H3G8S7              	100.00%
Bootstrap support for J3KBQ7 as seed ortholog is 91%.
Bootstrap support for H3G8S7 as seed ortholog is 100%.

Group of orthologs #1235. Best score 165 bits
Score difference with first non-orthologous sequence - C.immitis:165 P.ramorum:165

J0HHA7              	100.00%		H3GML2              	100.00%
Bootstrap support for J0HHA7 as seed ortholog is 100%.
Bootstrap support for H3GML2 as seed ortholog is 100%.

Group of orthologs #1236. Best score 165 bits
Score difference with first non-orthologous sequence - C.immitis:165 P.ramorum:165

J3KJJ7              	100.00%		H3G8H6              	100.00%
Bootstrap support for J3KJJ7 as seed ortholog is 100%.
Bootstrap support for H3G8H6 as seed ortholog is 100%.

Group of orthologs #1237. Best score 165 bits
Score difference with first non-orthologous sequence - C.immitis:165 P.ramorum:165

J3KJX3              	100.00%		H3G8Z6              	100.00%
Bootstrap support for J3KJX3 as seed ortholog is 100%.
Bootstrap support for H3G8Z6 as seed ortholog is 100%.

Group of orthologs #1238. Best score 165 bits
Score difference with first non-orthologous sequence - C.immitis:165 P.ramorum:165

J3KES0              	100.00%		H3GE73              	100.00%
Bootstrap support for J3KES0 as seed ortholog is 100%.
Bootstrap support for H3GE73 as seed ortholog is 100%.

Group of orthologs #1239. Best score 165 bits
Score difference with first non-orthologous sequence - C.immitis:98 P.ramorum:98

J3K8S0              	100.00%		H3GZV7              	100.00%
Bootstrap support for J3K8S0 as seed ortholog is 99%.
Bootstrap support for H3GZV7 as seed ortholog is 79%.

Group of orthologs #1240. Best score 165 bits
Score difference with first non-orthologous sequence - C.immitis:165 P.ramorum:165

J3KD07              	100.00%		H3HBG5              	100.00%
Bootstrap support for J3KD07 as seed ortholog is 100%.
Bootstrap support for H3HBG5 as seed ortholog is 100%.

Group of orthologs #1241. Best score 164 bits
Score difference with first non-orthologous sequence - C.immitis:164 P.ramorum:164

J3KEP9              	100.00%		H3G7Q8              	100.00%
Bootstrap support for J3KEP9 as seed ortholog is 100%.
Bootstrap support for H3G7Q8 as seed ortholog is 100%.

Group of orthologs #1242. Best score 164 bits
Score difference with first non-orthologous sequence - C.immitis:164 P.ramorum:164

Q1DHR3              	100.00%		H3G7X3              	100.00%
Bootstrap support for Q1DHR3 as seed ortholog is 100%.
Bootstrap support for H3G7X3 as seed ortholog is 100%.

Group of orthologs #1243. Best score 164 bits
Score difference with first non-orthologous sequence - C.immitis:16 P.ramorum:33

J3KEU1              	100.00%		H3GK99              	100.00%
Bootstrap support for J3KEU1 as seed ortholog is 72%.
Alternative seed ortholog is J3K8F4 (16 bits away from this cluster)
Bootstrap support for H3GK99 as seed ortholog is 79%.

Group of orthologs #1244. Best score 164 bits
Score difference with first non-orthologous sequence - C.immitis:164 P.ramorum:164

Q1DTI4              	100.00%		H3GKF9              	100.00%
Bootstrap support for Q1DTI4 as seed ortholog is 100%.
Bootstrap support for H3GKF9 as seed ortholog is 100%.

Group of orthologs #1245. Best score 164 bits
Score difference with first non-orthologous sequence - C.immitis:164 P.ramorum:1

J3KLY5              	100.00%		H3GUI7              	100.00%
Bootstrap support for J3KLY5 as seed ortholog is 100%.
Bootstrap support for H3GUI7 as seed ortholog is 48%.
Alternative seed ortholog is H3G9U2 (1 bits away from this cluster)

Group of orthologs #1246. Best score 164 bits
Score difference with first non-orthologous sequence - C.immitis:164 P.ramorum:164

J3KKJ6              	100.00%		H3H5Q9              	100.00%
Bootstrap support for J3KKJ6 as seed ortholog is 100%.
Bootstrap support for H3H5Q9 as seed ortholog is 100%.

Group of orthologs #1247. Best score 163 bits
Score difference with first non-orthologous sequence - C.immitis:163 P.ramorum:163

J3K860              	100.00%		H3G8Z1              	100.00%
                    	       		H3G9E6              	28.95%
Bootstrap support for J3K860 as seed ortholog is 100%.
Bootstrap support for H3G8Z1 as seed ortholog is 100%.

Group of orthologs #1248. Best score 163 bits
Score difference with first non-orthologous sequence - C.immitis:49 P.ramorum:163

J3KLY3              	100.00%		H3G5V4              	100.00%
J3KCQ7              	39.16%		
Bootstrap support for J3KLY3 as seed ortholog is 88%.
Bootstrap support for H3G5V4 as seed ortholog is 100%.

Group of orthologs #1249. Best score 163 bits
Score difference with first non-orthologous sequence - C.immitis:163 P.ramorum:163

Q1E5N0              	100.00%		H3GA01              	100.00%
                    	       		H3G9Z2              	82.81%
Bootstrap support for Q1E5N0 as seed ortholog is 100%.
Bootstrap support for H3GA01 as seed ortholog is 100%.

Group of orthologs #1250. Best score 163 bits
Score difference with first non-orthologous sequence - C.immitis:78 P.ramorum:163

J3KAZ9              	100.00%		H3HCV2              	100.00%
                    	       		H3GGS9              	13.24%
Bootstrap support for J3KAZ9 as seed ortholog is 96%.
Bootstrap support for H3HCV2 as seed ortholog is 100%.

Group of orthologs #1251. Best score 163 bits
Score difference with first non-orthologous sequence - C.immitis:163 P.ramorum:163

J3KB06              	100.00%		H3HDZ5              	100.00%
                    	       		H3GZX0              	36.03%
Bootstrap support for J3KB06 as seed ortholog is 100%.
Bootstrap support for H3HDZ5 as seed ortholog is 100%.

Group of orthologs #1252. Best score 163 bits
Score difference with first non-orthologous sequence - C.immitis:163 P.ramorum:163

J0HHE6              	100.00%		H3G9D9              	100.00%
Bootstrap support for J0HHE6 as seed ortholog is 100%.
Bootstrap support for H3G9D9 as seed ortholog is 100%.

Group of orthologs #1253. Best score 163 bits
Score difference with first non-orthologous sequence - C.immitis:163 P.ramorum:163

J3K3X4              	100.00%		H3GH48              	100.00%
Bootstrap support for J3K3X4 as seed ortholog is 100%.
Bootstrap support for H3GH48 as seed ortholog is 100%.

Group of orthologs #1254. Best score 163 bits
Score difference with first non-orthologous sequence - C.immitis:106 P.ramorum:163

J3KEV9              	100.00%		H3G840              	100.00%
Bootstrap support for J3KEV9 as seed ortholog is 99%.
Bootstrap support for H3G840 as seed ortholog is 100%.

Group of orthologs #1255. Best score 163 bits
Score difference with first non-orthologous sequence - C.immitis:12 P.ramorum:32

J3KCY3              	100.00%		H3GBF0              	100.00%
Bootstrap support for J3KCY3 as seed ortholog is 64%.
Alternative seed ortholog is J3KK55 (12 bits away from this cluster)
Bootstrap support for H3GBF0 as seed ortholog is 82%.

Group of orthologs #1256. Best score 163 bits
Score difference with first non-orthologous sequence - C.immitis:163 P.ramorum:163

J3KD14              	100.00%		H3GG52              	100.00%
Bootstrap support for J3KD14 as seed ortholog is 100%.
Bootstrap support for H3GG52 as seed ortholog is 100%.

Group of orthologs #1257. Best score 163 bits
Score difference with first non-orthologous sequence - C.immitis:163 P.ramorum:163

J3KK48              	100.00%		H3GFL7              	100.00%
Bootstrap support for J3KK48 as seed ortholog is 100%.
Bootstrap support for H3GFL7 as seed ortholog is 100%.

Group of orthologs #1258. Best score 163 bits
Score difference with first non-orthologous sequence - C.immitis:163 P.ramorum:163

J3KIS4              	100.00%		H3GTI2              	100.00%
Bootstrap support for J3KIS4 as seed ortholog is 100%.
Bootstrap support for H3GTI2 as seed ortholog is 100%.

Group of orthologs #1259. Best score 162 bits
Score difference with first non-orthologous sequence - C.immitis:162 P.ramorum:162

J3KIE1              	100.00%		H3HC98              	100.00%
                    	       		H3H721              	72.19%
Bootstrap support for J3KIE1 as seed ortholog is 100%.
Bootstrap support for H3HC98 as seed ortholog is 100%.

Group of orthologs #1260. Best score 162 bits
Score difference with first non-orthologous sequence - C.immitis:79 P.ramorum:88

J3K8I2              	100.00%		H3G6M2              	100.00%
Bootstrap support for J3K8I2 as seed ortholog is 99%.
Bootstrap support for H3G6M2 as seed ortholog is 99%.

Group of orthologs #1261. Best score 162 bits
Score difference with first non-orthologous sequence - C.immitis:162 P.ramorum:118

J3KHZ4              	100.00%		H3G6M7              	100.00%
Bootstrap support for J3KHZ4 as seed ortholog is 100%.
Bootstrap support for H3G6M7 as seed ortholog is 100%.

Group of orthologs #1262. Best score 162 bits
Score difference with first non-orthologous sequence - C.immitis:162 P.ramorum:162

J3KEX5              	100.00%		H3G9X3              	100.00%
Bootstrap support for J3KEX5 as seed ortholog is 100%.
Bootstrap support for H3G9X3 as seed ortholog is 100%.

Group of orthologs #1263. Best score 162 bits
Score difference with first non-orthologous sequence - C.immitis:162 P.ramorum:162

J3KC67              	100.00%		H3GUX3              	100.00%
Bootstrap support for J3KC67 as seed ortholog is 100%.
Bootstrap support for H3GUX3 as seed ortholog is 100%.

Group of orthologs #1264. Best score 162 bits
Score difference with first non-orthologous sequence - C.immitis:162 P.ramorum:162

Q1E6K9              	100.00%		H3GTA2              	100.00%
Bootstrap support for Q1E6K9 as seed ortholog is 100%.
Bootstrap support for H3GTA2 as seed ortholog is 100%.

Group of orthologs #1265. Best score 161 bits
Score difference with first non-orthologous sequence - C.immitis:161 P.ramorum:161

J3KHZ3              	100.00%		H3G8A6              	100.00%
Bootstrap support for J3KHZ3 as seed ortholog is 100%.
Bootstrap support for H3G8A6 as seed ortholog is 100%.

Group of orthologs #1266. Best score 161 bits
Score difference with first non-orthologous sequence - C.immitis:161 P.ramorum:161

J3KDF9              	100.00%		H3GE00              	100.00%
Bootstrap support for J3KDF9 as seed ortholog is 100%.
Bootstrap support for H3GE00 as seed ortholog is 100%.

Group of orthologs #1267. Best score 161 bits
Score difference with first non-orthologous sequence - C.immitis:161 P.ramorum:161

J3KHL6              	100.00%		H3GAM8              	100.00%
Bootstrap support for J3KHL6 as seed ortholog is 100%.
Bootstrap support for H3GAM8 as seed ortholog is 100%.

Group of orthologs #1268. Best score 161 bits
Score difference with first non-orthologous sequence - C.immitis:39 P.ramorum:161

J3KBW6              	100.00%		H3GGD2              	100.00%
Bootstrap support for J3KBW6 as seed ortholog is 79%.
Bootstrap support for H3GGD2 as seed ortholog is 100%.

Group of orthologs #1269. Best score 161 bits
Score difference with first non-orthologous sequence - C.immitis:161 P.ramorum:161

J3KEM5              	100.00%		H3GDZ4              	100.00%
Bootstrap support for J3KEM5 as seed ortholog is 100%.
Bootstrap support for H3GDZ4 as seed ortholog is 100%.

Group of orthologs #1270. Best score 161 bits
Score difference with first non-orthologous sequence - C.immitis:161 P.ramorum:161

J3K5N9              	100.00%		H3GU73              	100.00%
Bootstrap support for J3K5N9 as seed ortholog is 100%.
Bootstrap support for H3GU73 as seed ortholog is 100%.

Group of orthologs #1271. Best score 160 bits
Score difference with first non-orthologous sequence - C.immitis:160 P.ramorum:160

J3K0L0              	100.00%		H3GAS4              	100.00%
Bootstrap support for J3K0L0 as seed ortholog is 100%.
Bootstrap support for H3GAS4 as seed ortholog is 100%.

Group of orthologs #1272. Best score 160 bits
Score difference with first non-orthologous sequence - C.immitis:74 P.ramorum:85

J3K709              	100.00%		H3G6E1              	100.00%
Bootstrap support for J3K709 as seed ortholog is 99%.
Bootstrap support for H3G6E1 as seed ortholog is 99%.

Group of orthologs #1273. Best score 160 bits
Score difference with first non-orthologous sequence - C.immitis:160 P.ramorum:160

J3K3F8              	100.00%		H3GA82              	100.00%
Bootstrap support for J3K3F8 as seed ortholog is 100%.
Bootstrap support for H3GA82 as seed ortholog is 100%.

Group of orthologs #1274. Best score 160 bits
Score difference with first non-orthologous sequence - C.immitis:160 P.ramorum:160

J3K876              	100.00%		H3G8K0              	100.00%
Bootstrap support for J3K876 as seed ortholog is 100%.
Bootstrap support for H3G8K0 as seed ortholog is 100%.

Group of orthologs #1275. Best score 160 bits
Score difference with first non-orthologous sequence - C.immitis:85 P.ramorum:78

J3K8X9              	100.00%		H3G7W6              	100.00%
Bootstrap support for J3K8X9 as seed ortholog is 99%.
Bootstrap support for H3G7W6 as seed ortholog is 97%.

Group of orthologs #1276. Best score 160 bits
Score difference with first non-orthologous sequence - C.immitis:160 P.ramorum:7

J3K821              	100.00%		H3G9X6              	100.00%
Bootstrap support for J3K821 as seed ortholog is 100%.
Bootstrap support for H3G9X6 as seed ortholog is 56%.
Alternative seed ortholog is H3GXT4 (7 bits away from this cluster)

Group of orthologs #1277. Best score 160 bits
Score difference with first non-orthologous sequence - C.immitis:160 P.ramorum:160

J3K4J9              	100.00%		H3GGU4              	100.00%
Bootstrap support for J3K4J9 as seed ortholog is 100%.
Bootstrap support for H3GGU4 as seed ortholog is 100%.

Group of orthologs #1278. Best score 160 bits
Score difference with first non-orthologous sequence - C.immitis:160 P.ramorum:160

J3K9Y3              	100.00%		H3GFZ5              	100.00%
Bootstrap support for J3K9Y3 as seed ortholog is 100%.
Bootstrap support for H3GFZ5 as seed ortholog is 100%.

Group of orthologs #1279. Best score 160 bits
Score difference with first non-orthologous sequence - C.immitis:160 P.ramorum:160

J0HF21              	100.00%		H3GWX1              	100.00%
Bootstrap support for J0HF21 as seed ortholog is 100%.
Bootstrap support for H3GWX1 as seed ortholog is 100%.

Group of orthologs #1280. Best score 160 bits
Score difference with first non-orthologous sequence - C.immitis:32 P.ramorum:160

J3KF05              	100.00%		H3GGH8              	100.00%
Bootstrap support for J3KF05 as seed ortholog is 80%.
Bootstrap support for H3GGH8 as seed ortholog is 100%.

Group of orthologs #1281. Best score 160 bits
Score difference with first non-orthologous sequence - C.immitis:160 P.ramorum:160

J3KCT6              	100.00%		H3GWN5              	100.00%
Bootstrap support for J3KCT6 as seed ortholog is 100%.
Bootstrap support for H3GWN5 as seed ortholog is 100%.

Group of orthologs #1282. Best score 160 bits
Score difference with first non-orthologous sequence - C.immitis:160 P.ramorum:87

J3KIL5              	100.00%		H3H3F5              	100.00%
Bootstrap support for J3KIL5 as seed ortholog is 100%.
Bootstrap support for H3H3F5 as seed ortholog is 89%.

Group of orthologs #1283. Best score 159 bits
Score difference with first non-orthologous sequence - C.immitis:159 P.ramorum:159

J3K0X9              	100.00%		H3G771              	100.00%
J3KE69              	16.82%		
Bootstrap support for J3K0X9 as seed ortholog is 100%.
Bootstrap support for H3G771 as seed ortholog is 100%.

Group of orthologs #1284. Best score 159 bits
Score difference with first non-orthologous sequence - C.immitis:159 P.ramorum:21

J3K1T3              	100.00%		H3H4J6              	100.00%
                    	       		H3H835              	49.72%
Bootstrap support for J3K1T3 as seed ortholog is 100%.
Bootstrap support for H3H4J6 as seed ortholog is 61%.
Alternative seed ortholog is H3GZR8 (21 bits away from this cluster)

Group of orthologs #1285. Best score 159 bits
Score difference with first non-orthologous sequence - C.immitis:159 P.ramorum:159

J0HE82              	100.00%		H3GAG5              	100.00%
Bootstrap support for J0HE82 as seed ortholog is 100%.
Bootstrap support for H3GAG5 as seed ortholog is 100%.

Group of orthologs #1286. Best score 159 bits
Score difference with first non-orthologous sequence - C.immitis:159 P.ramorum:159

J3KL27              	100.00%		H3GAD8              	100.00%
Bootstrap support for J3KL27 as seed ortholog is 100%.
Bootstrap support for H3GAD8 as seed ortholog is 100%.

Group of orthologs #1287. Best score 159 bits
Score difference with first non-orthologous sequence - C.immitis:159 P.ramorum:159

J3K6M9              	100.00%		H3GSZ8              	100.00%
Bootstrap support for J3K6M9 as seed ortholog is 100%.
Bootstrap support for H3GSZ8 as seed ortholog is 100%.

Group of orthologs #1288. Best score 159 bits
Score difference with first non-orthologous sequence - C.immitis:159 P.ramorum:159

J0HDU9              	100.00%		H3H369              	100.00%
Bootstrap support for J0HDU9 as seed ortholog is 100%.
Bootstrap support for H3H369 as seed ortholog is 100%.

Group of orthologs #1289. Best score 159 bits
Score difference with first non-orthologous sequence - C.immitis:159 P.ramorum:159

J3KLV6              	100.00%		H3GGW5              	100.00%
Bootstrap support for J3KLV6 as seed ortholog is 100%.
Bootstrap support for H3GGW5 as seed ortholog is 100%.

Group of orthologs #1290. Best score 159 bits
Score difference with first non-orthologous sequence - C.immitis:159 P.ramorum:159

J3KFL8              	100.00%		H3GX09              	100.00%
Bootstrap support for J3KFL8 as seed ortholog is 100%.
Bootstrap support for H3GX09 as seed ortholog is 100%.

Group of orthologs #1291. Best score 159 bits
Score difference with first non-orthologous sequence - C.immitis:159 P.ramorum:159

J3K3A0              	100.00%		H3HDB3              	100.00%
Bootstrap support for J3K3A0 as seed ortholog is 100%.
Bootstrap support for H3HDB3 as seed ortholog is 100%.

Group of orthologs #1292. Best score 158 bits
Score difference with first non-orthologous sequence - C.immitis:158 P.ramorum:158

I9NT45              	100.00%		H3G8M6              	100.00%
Bootstrap support for I9NT45 as seed ortholog is 100%.
Bootstrap support for H3G8M6 as seed ortholog is 100%.

Group of orthologs #1293. Best score 158 bits
Score difference with first non-orthologous sequence - C.immitis:78 P.ramorum:158

J3K3Z0              	100.00%		H3G849              	100.00%
Bootstrap support for J3K3Z0 as seed ortholog is 99%.
Bootstrap support for H3G849 as seed ortholog is 100%.

Group of orthologs #1294. Best score 158 bits
Score difference with first non-orthologous sequence - C.immitis:158 P.ramorum:158

J3K397              	100.00%		H3GAD2              	100.00%
Bootstrap support for J3K397 as seed ortholog is 100%.
Bootstrap support for H3GAD2 as seed ortholog is 100%.

Group of orthologs #1295. Best score 158 bits
Score difference with first non-orthologous sequence - C.immitis:158 P.ramorum:158

J3KBW3              	100.00%		H3G843              	100.00%
Bootstrap support for J3KBW3 as seed ortholog is 100%.
Bootstrap support for H3G843 as seed ortholog is 100%.

Group of orthologs #1296. Best score 158 bits
Score difference with first non-orthologous sequence - C.immitis:158 P.ramorum:158

J3KJ07              	100.00%		H3G714              	100.00%
Bootstrap support for J3KJ07 as seed ortholog is 100%.
Bootstrap support for H3G714 as seed ortholog is 100%.

Group of orthologs #1297. Best score 158 bits
Score difference with first non-orthologous sequence - C.immitis:158 P.ramorum:158

J3KJP1              	100.00%		H3GC28              	100.00%
Bootstrap support for J3KJP1 as seed ortholog is 100%.
Bootstrap support for H3GC28 as seed ortholog is 100%.

Group of orthologs #1298. Best score 158 bits
Score difference with first non-orthologous sequence - C.immitis:158 P.ramorum:158

J3KBH7              	100.00%		H3GMF6              	100.00%
Bootstrap support for J3KBH7 as seed ortholog is 100%.
Bootstrap support for H3GMF6 as seed ortholog is 100%.

Group of orthologs #1299. Best score 158 bits
Score difference with first non-orthologous sequence - C.immitis:158 P.ramorum:108

J3KM54              	100.00%		H3GEM1              	100.00%
Bootstrap support for J3KM54 as seed ortholog is 100%.
Bootstrap support for H3GEM1 as seed ortholog is 99%.

Group of orthologs #1300. Best score 158 bits
Score difference with first non-orthologous sequence - C.immitis:158 P.ramorum:158

J3KKJ5              	100.00%		H3GRW5              	100.00%
Bootstrap support for J3KKJ5 as seed ortholog is 100%.
Bootstrap support for H3GRW5 as seed ortholog is 100%.

Group of orthologs #1301. Best score 158 bits
Score difference with first non-orthologous sequence - C.immitis:158 P.ramorum:158

J3KLU5              	100.00%		H3GW59              	100.00%
Bootstrap support for J3KLU5 as seed ortholog is 100%.
Bootstrap support for H3GW59 as seed ortholog is 100%.

Group of orthologs #1302. Best score 157 bits
Score difference with first non-orthologous sequence - C.immitis:73 P.ramorum:21

J3K879              	100.00%		H3GSJ8              	100.00%
J3KIZ2              	13.32%		H3GIK8              	8.90%
Bootstrap support for J3K879 as seed ortholog is 98%.
Bootstrap support for H3GSJ8 as seed ortholog is 72%.
Alternative seed ortholog is H3GCN5 (21 bits away from this cluster)

Group of orthologs #1303. Best score 157 bits
Score difference with first non-orthologous sequence - C.immitis:157 P.ramorum:157

J3K2N7              	100.00%		H3GCG0              	100.00%
Bootstrap support for J3K2N7 as seed ortholog is 100%.
Bootstrap support for H3GCG0 as seed ortholog is 100%.

Group of orthologs #1304. Best score 157 bits
Score difference with first non-orthologous sequence - C.immitis:157 P.ramorum:157

J3KF75              	100.00%		H3G9M1              	100.00%
Bootstrap support for J3KF75 as seed ortholog is 100%.
Bootstrap support for H3G9M1 as seed ortholog is 100%.

Group of orthologs #1305. Best score 157 bits
Score difference with first non-orthologous sequence - C.immitis:157 P.ramorum:157

Q1DI23              	100.00%		H3G8V2              	100.00%
Bootstrap support for Q1DI23 as seed ortholog is 100%.
Bootstrap support for H3G8V2 as seed ortholog is 100%.

Group of orthologs #1306. Best score 156 bits
Score difference with first non-orthologous sequence - C.immitis:156 P.ramorum:156

J3KID8              	100.00%		H3GEV2              	100.00%
J3K137              	12.43%		
J3KHM9              	7.74%		
Bootstrap support for J3KID8 as seed ortholog is 100%.
Bootstrap support for H3GEV2 as seed ortholog is 100%.

Group of orthologs #1307. Best score 156 bits
Score difference with first non-orthologous sequence - C.immitis:17 P.ramorum:156

J3K909              	100.00%		H3HAZ0              	100.00%
                    	       		H3GCK9              	60.47%
Bootstrap support for J3K909 as seed ortholog is 68%.
Alternative seed ortholog is J3K7D8 (17 bits away from this cluster)
Bootstrap support for H3HAZ0 as seed ortholog is 100%.

Group of orthologs #1308. Best score 156 bits
Score difference with first non-orthologous sequence - C.immitis:43 P.ramorum:109

J3K192              	100.00%		H3GDA3              	100.00%
Bootstrap support for J3K192 as seed ortholog is 82%.
Bootstrap support for H3GDA3 as seed ortholog is 99%.

Group of orthologs #1309. Best score 156 bits
Score difference with first non-orthologous sequence - C.immitis:156 P.ramorum:156

J3KCE1              	100.00%		H3G9W8              	100.00%
Bootstrap support for J3KCE1 as seed ortholog is 100%.
Bootstrap support for H3G9W8 as seed ortholog is 100%.

Group of orthologs #1310. Best score 156 bits
Score difference with first non-orthologous sequence - C.immitis:156 P.ramorum:156

J3K0C2              	100.00%		H3GVF3              	100.00%
Bootstrap support for J3K0C2 as seed ortholog is 100%.
Bootstrap support for H3GVF3 as seed ortholog is 100%.

Group of orthologs #1311. Best score 156 bits
Score difference with first non-orthologous sequence - C.immitis:156 P.ramorum:156

J3K431              	100.00%		H3GSJ5              	100.00%
Bootstrap support for J3K431 as seed ortholog is 100%.
Bootstrap support for H3GSJ5 as seed ortholog is 100%.

Group of orthologs #1312. Best score 156 bits
Score difference with first non-orthologous sequence - C.immitis:156 P.ramorum:156

J3K3E2              	100.00%		H3HB87              	100.00%
Bootstrap support for J3K3E2 as seed ortholog is 100%.
Bootstrap support for H3HB87 as seed ortholog is 100%.

Group of orthologs #1313. Best score 156 bits
Score difference with first non-orthologous sequence - C.immitis:42 P.ramorum:156

J3KF17              	100.00%		H3H3F7              	100.00%
Bootstrap support for J3KF17 as seed ortholog is 94%.
Bootstrap support for H3H3F7 as seed ortholog is 100%.

Group of orthologs #1314. Best score 155 bits
Score difference with first non-orthologous sequence - C.immitis:98 P.ramorum:155

D2YW48              	100.00%		H3GAB9              	100.00%
                    	       		H3GZH9              	33.12%
Bootstrap support for D2YW48 as seed ortholog is 99%.
Bootstrap support for H3GAB9 as seed ortholog is 100%.

Group of orthologs #1315. Best score 155 bits
Score difference with first non-orthologous sequence - C.immitis:155 P.ramorum:155

J3K918              	100.00%		H3G9R6              	100.00%
Bootstrap support for J3K918 as seed ortholog is 100%.
Bootstrap support for H3G9R6 as seed ortholog is 100%.

Group of orthologs #1316. Best score 155 bits
Score difference with first non-orthologous sequence - C.immitis:155 P.ramorum:155

J3K316              	100.00%		H3GG33              	100.00%
Bootstrap support for J3K316 as seed ortholog is 100%.
Bootstrap support for H3GG33 as seed ortholog is 100%.

Group of orthologs #1317. Best score 155 bits
Score difference with first non-orthologous sequence - C.immitis:155 P.ramorum:155

I9XLY6              	100.00%		H3GVF5              	100.00%
Bootstrap support for I9XLY6 as seed ortholog is 100%.
Bootstrap support for H3GVF5 as seed ortholog is 100%.

Group of orthologs #1318. Best score 155 bits
Score difference with first non-orthologous sequence - C.immitis:155 P.ramorum:95

Q1DR81              	100.00%		H3G614              	100.00%
Bootstrap support for Q1DR81 as seed ortholog is 100%.
Bootstrap support for H3G614 as seed ortholog is 98%.

Group of orthologs #1319. Best score 155 bits
Score difference with first non-orthologous sequence - C.immitis:155 P.ramorum:155

Q1DTG2              	100.00%		H3G6D5              	100.00%
Bootstrap support for Q1DTG2 as seed ortholog is 100%.
Bootstrap support for H3G6D5 as seed ortholog is 100%.

Group of orthologs #1320. Best score 155 bits
Score difference with first non-orthologous sequence - C.immitis:155 P.ramorum:155

J3K6H7              	100.00%		H3GQT3              	100.00%
Bootstrap support for J3K6H7 as seed ortholog is 100%.
Bootstrap support for H3GQT3 as seed ortholog is 100%.

Group of orthologs #1321. Best score 155 bits
Score difference with first non-orthologous sequence - C.immitis:155 P.ramorum:155

J3KIG8              	100.00%		H3GLW2              	100.00%
Bootstrap support for J3KIG8 as seed ortholog is 100%.
Bootstrap support for H3GLW2 as seed ortholog is 100%.

Group of orthologs #1322. Best score 154 bits
Score difference with first non-orthologous sequence - C.immitis:53 P.ramorum:68

J3KFH7              	100.00%		H3GVU5              	100.00%
                    	       		H3GVU4              	69.94%
Bootstrap support for J3KFH7 as seed ortholog is 90%.
Bootstrap support for H3GVU5 as seed ortholog is 96%.

Group of orthologs #1323. Best score 154 bits
Score difference with first non-orthologous sequence - C.immitis:89 P.ramorum:154

J3K548              	100.00%		H3GC32              	100.00%
Bootstrap support for J3K548 as seed ortholog is 94%.
Bootstrap support for H3GC32 as seed ortholog is 100%.

Group of orthologs #1324. Best score 154 bits
Score difference with first non-orthologous sequence - C.immitis:154 P.ramorum:154

J3KEU7              	100.00%		H3G8T8              	100.00%
Bootstrap support for J3KEU7 as seed ortholog is 100%.
Bootstrap support for H3G8T8 as seed ortholog is 100%.

Group of orthologs #1325. Best score 154 bits
Score difference with first non-orthologous sequence - C.immitis:154 P.ramorum:154

J3K589              	100.00%		H3GMZ0              	100.00%
Bootstrap support for J3K589 as seed ortholog is 100%.
Bootstrap support for H3GMZ0 as seed ortholog is 100%.

Group of orthologs #1326. Best score 154 bits
Score difference with first non-orthologous sequence - C.immitis:41 P.ramorum:52

J3KGW9              	100.00%		H3GCJ5              	100.00%
Bootstrap support for J3KGW9 as seed ortholog is 77%.
Bootstrap support for H3GCJ5 as seed ortholog is 87%.

Group of orthologs #1327. Best score 154 bits
Score difference with first non-orthologous sequence - C.immitis:154 P.ramorum:154

J3K2Q5              	100.00%		H3GVK2              	100.00%
Bootstrap support for J3K2Q5 as seed ortholog is 100%.
Bootstrap support for H3GVK2 as seed ortholog is 100%.

Group of orthologs #1328. Best score 154 bits
Score difference with first non-orthologous sequence - C.immitis:154 P.ramorum:72

J3K6Z2              	100.00%		H3GUX4              	100.00%
Bootstrap support for J3K6Z2 as seed ortholog is 100%.
Bootstrap support for H3GUX4 as seed ortholog is 96%.

Group of orthologs #1329. Best score 154 bits
Score difference with first non-orthologous sequence - C.immitis:154 P.ramorum:154

J3KM22              	100.00%		H3GFJ5              	100.00%
Bootstrap support for J3KM22 as seed ortholog is 100%.
Bootstrap support for H3GFJ5 as seed ortholog is 100%.

Group of orthologs #1330. Best score 154 bits
Score difference with first non-orthologous sequence - C.immitis:154 P.ramorum:154

J3K9D6              	100.00%		H3GWY1              	100.00%
Bootstrap support for J3K9D6 as seed ortholog is 100%.
Bootstrap support for H3GWY1 as seed ortholog is 100%.

Group of orthologs #1331. Best score 154 bits
Score difference with first non-orthologous sequence - C.immitis:20 P.ramorum:154

J3K1D5              	100.00%		H3HCW2              	100.00%
Bootstrap support for J3K1D5 as seed ortholog is 70%.
Alternative seed ortholog is I9XJB7 (20 bits away from this cluster)
Bootstrap support for H3HCW2 as seed ortholog is 100%.

Group of orthologs #1332. Best score 153 bits
Score difference with first non-orthologous sequence - C.immitis:97 P.ramorum:153

J3K185              	100.00%		H3G6L7              	100.00%
                    	       		H3G6H5              	39.92%
Bootstrap support for J3K185 as seed ortholog is 99%.
Bootstrap support for H3G6L7 as seed ortholog is 100%.

Group of orthologs #1333. Best score 153 bits
Score difference with first non-orthologous sequence - C.immitis:109 P.ramorum:96

J3K8E0              	100.00%		H3G858              	100.00%
Bootstrap support for J3K8E0 as seed ortholog is 99%.
Bootstrap support for H3G858 as seed ortholog is 99%.

Group of orthologs #1334. Best score 153 bits
Score difference with first non-orthologous sequence - C.immitis:153 P.ramorum:153

J3KDR1              	100.00%		H3G808              	100.00%
Bootstrap support for J3KDR1 as seed ortholog is 100%.
Bootstrap support for H3G808 as seed ortholog is 100%.

Group of orthologs #1335. Best score 153 bits
Score difference with first non-orthologous sequence - C.immitis:153 P.ramorum:153

J3KDN5              	100.00%		H3GAV6              	100.00%
Bootstrap support for J3KDN5 as seed ortholog is 100%.
Bootstrap support for H3GAV6 as seed ortholog is 100%.

Group of orthologs #1336. Best score 153 bits
Score difference with first non-orthologous sequence - C.immitis:153 P.ramorum:66

J3KD50              	100.00%		H3GM33              	100.00%
Bootstrap support for J3KD50 as seed ortholog is 100%.
Bootstrap support for H3GM33 as seed ortholog is 87%.

Group of orthologs #1337. Best score 153 bits
Score difference with first non-orthologous sequence - C.immitis:153 P.ramorum:153

J3KJX2              	100.00%		H3H299              	100.00%
Bootstrap support for J3KJX2 as seed ortholog is 100%.
Bootstrap support for H3H299 as seed ortholog is 100%.

Group of orthologs #1338. Best score 153 bits
Score difference with first non-orthologous sequence - C.immitis:153 P.ramorum:153

J3KEK0              	100.00%		H3HCI3              	100.00%
Bootstrap support for J3KEK0 as seed ortholog is 100%.
Bootstrap support for H3HCI3 as seed ortholog is 100%.

Group of orthologs #1339. Best score 152 bits
Score difference with first non-orthologous sequence - C.immitis:152 P.ramorum:152

J3K6B9              	100.00%		H3GBE8              	100.00%
Bootstrap support for J3K6B9 as seed ortholog is 100%.
Bootstrap support for H3GBE8 as seed ortholog is 100%.

Group of orthologs #1340. Best score 152 bits
Score difference with first non-orthologous sequence - C.immitis:152 P.ramorum:18

J3K595              	100.00%		H3GY72              	100.00%
Bootstrap support for J3K595 as seed ortholog is 100%.
Bootstrap support for H3GY72 as seed ortholog is 67%.
Alternative seed ortholog is H3G6M3 (18 bits away from this cluster)

Group of orthologs #1341. Best score 152 bits
Score difference with first non-orthologous sequence - C.immitis:152 P.ramorum:152

J3KE51              	100.00%		H3GWZ9              	100.00%
Bootstrap support for J3KE51 as seed ortholog is 100%.
Bootstrap support for H3GWZ9 as seed ortholog is 100%.

Group of orthologs #1342. Best score 151 bits
Score difference with first non-orthologous sequence - C.immitis:151 P.ramorum:151

J3KKZ8              	100.00%		H3GDV6              	100.00%
                    	       		H3G5H6              	27.22%
                    	       		H3G5H5              	15.51%
Bootstrap support for J3KKZ8 as seed ortholog is 100%.
Bootstrap support for H3GDV6 as seed ortholog is 100%.

Group of orthologs #1343. Best score 151 bits
Score difference with first non-orthologous sequence - C.immitis:151 P.ramorum:151

J3K514              	100.00%		H3GD54              	100.00%
Bootstrap support for J3K514 as seed ortholog is 100%.
Bootstrap support for H3GD54 as seed ortholog is 100%.

Group of orthologs #1344. Best score 151 bits
Score difference with first non-orthologous sequence - C.immitis:151 P.ramorum:151

J3K8M1              	100.00%		H3GZL1              	100.00%
Bootstrap support for J3K8M1 as seed ortholog is 100%.
Bootstrap support for H3GZL1 as seed ortholog is 100%.

Group of orthologs #1345. Best score 151 bits
Score difference with first non-orthologous sequence - C.immitis:151 P.ramorum:151

J3KJM5              	100.00%		H3GWU4              	100.00%
Bootstrap support for J3KJM5 as seed ortholog is 100%.
Bootstrap support for H3GWU4 as seed ortholog is 100%.

Group of orthologs #1346. Best score 151 bits
Score difference with first non-orthologous sequence - C.immitis:151 P.ramorum:151

J3KGS2              	100.00%		H3HD92              	100.00%
Bootstrap support for J3KGS2 as seed ortholog is 100%.
Bootstrap support for H3HD92 as seed ortholog is 100%.

Group of orthologs #1347. Best score 150 bits
Score difference with first non-orthologous sequence - C.immitis:150 P.ramorum:150

Q1EBD3              	100.00%		H3HA61              	100.00%
                    	       		H3GJN2              	98.95%
Bootstrap support for Q1EBD3 as seed ortholog is 100%.
Bootstrap support for H3HA61 as seed ortholog is 100%.

Group of orthologs #1348. Best score 150 bits
Score difference with first non-orthologous sequence - C.immitis:150 P.ramorum:150

J3K9L4              	100.00%		H3GPB1              	100.00%
Bootstrap support for J3K9L4 as seed ortholog is 100%.
Bootstrap support for H3GPB1 as seed ortholog is 100%.

Group of orthologs #1349. Best score 150 bits
Score difference with first non-orthologous sequence - C.immitis:150 P.ramorum:150

J3KDL6              	100.00%		H3GQP5              	100.00%
Bootstrap support for J3KDL6 as seed ortholog is 100%.
Bootstrap support for H3GQP5 as seed ortholog is 100%.

Group of orthologs #1350. Best score 150 bits
Score difference with first non-orthologous sequence - C.immitis:53 P.ramorum:76

J3KIR5              	100.00%		H3GXB8              	100.00%
Bootstrap support for J3KIR5 as seed ortholog is 90%.
Bootstrap support for H3GXB8 as seed ortholog is 96%.

Group of orthologs #1351. Best score 150 bits
Score difference with first non-orthologous sequence - C.immitis:150 P.ramorum:66

J3K9Z1              	100.00%		H3HCJ4              	100.00%
Bootstrap support for J3K9Z1 as seed ortholog is 100%.
Bootstrap support for H3HCJ4 as seed ortholog is 94%.

Group of orthologs #1352. Best score 149 bits
Score difference with first non-orthologous sequence - C.immitis:40 P.ramorum:149

J3KDU2              	100.00%		H3GKL9              	100.00%
J3KIM2              	100.00%		H3HBY4              	100.00%
J3KGS4              	28.84%		H3GKM2              	50.76%
                    	       		H3GKM0              	45.13%
                    	       		H3GKG5              	31.17%
                    	       		H3H7A8              	23.70%
                    	       		H3GMY9              	23.05%
                    	       		H3GWE6              	22.51%
                    	       		H3GGY6              	21.75%
                    	       		H3GES4              	21.32%
                    	       		H3GQH4              	21.10%
                    	       		H3GAC8              	20.89%
                    	       		H3GQJ1              	20.56%
                    	       		H3GGY5              	20.02%
                    	       		H3GQH3              	19.81%
                    	       		H3GRJ9              	19.70%
                    	       		H3GKY4              	19.59%
                    	       		H3GRK0              	17.86%
                    	       		H3GES5              	17.64%
                    	       		H3GRJ4              	17.32%
                    	       		H3GBW0              	17.21%
                    	       		H3H0D6              	8.98%
Bootstrap support for J3KDU2 as seed ortholog is 78%.
Bootstrap support for J3KIM2 as seed ortholog is 65%.
Alternative seed ortholog is J3KEG7 (40 bits away from this cluster)
Bootstrap support for H3GKL9 as seed ortholog is 100%.
Bootstrap support for H3HBY4 as seed ortholog is 100%.

Group of orthologs #1353. Best score 149 bits
Score difference with first non-orthologous sequence - C.immitis:67 P.ramorum:149

J3K4B8              	100.00%		H3H3U8              	100.00%
                    	       		H3GTY4              	30.60%
Bootstrap support for J3K4B8 as seed ortholog is 99%.
Bootstrap support for H3H3U8 as seed ortholog is 100%.

Group of orthologs #1354. Best score 149 bits
Score difference with first non-orthologous sequence - C.immitis:149 P.ramorum:149

J3K8P1              	100.00%		H3GAU5              	100.00%
Bootstrap support for J3K8P1 as seed ortholog is 100%.
Bootstrap support for H3GAU5 as seed ortholog is 100%.

Group of orthologs #1355. Best score 149 bits
Score difference with first non-orthologous sequence - C.immitis:149 P.ramorum:149

J3KGY3              	100.00%		H3G703              	100.00%
Bootstrap support for J3KGY3 as seed ortholog is 100%.
Bootstrap support for H3G703 as seed ortholog is 100%.

Group of orthologs #1356. Best score 149 bits
Score difference with first non-orthologous sequence - C.immitis:149 P.ramorum:149

J3K6D3              	100.00%		H3GJ66              	100.00%
Bootstrap support for J3K6D3 as seed ortholog is 100%.
Bootstrap support for H3GJ66 as seed ortholog is 100%.

Group of orthologs #1357. Best score 149 bits
Score difference with first non-orthologous sequence - C.immitis:149 P.ramorum:149

J3K6G7              	100.00%		H3GLC1              	100.00%
Bootstrap support for J3K6G7 as seed ortholog is 100%.
Bootstrap support for H3GLC1 as seed ortholog is 100%.

Group of orthologs #1358. Best score 149 bits
Score difference with first non-orthologous sequence - C.immitis:149 P.ramorum:149

J3KD81              	100.00%		H3GXU6              	100.00%
Bootstrap support for J3KD81 as seed ortholog is 100%.
Bootstrap support for H3GXU6 as seed ortholog is 100%.

Group of orthologs #1359. Best score 148 bits
Score difference with first non-orthologous sequence - C.immitis:148 P.ramorum:148

J3K882              	100.00%		H3GJ62              	100.00%
                    	       		H3GJ63              	86.28%
Bootstrap support for J3K882 as seed ortholog is 100%.
Bootstrap support for H3GJ62 as seed ortholog is 100%.

Group of orthologs #1360. Best score 148 bits
Score difference with first non-orthologous sequence - C.immitis:148 P.ramorum:104

J3KFZ3              	100.00%		H3G5G4              	100.00%
Bootstrap support for J3KFZ3 as seed ortholog is 100%.
Bootstrap support for H3G5G4 as seed ortholog is 100%.

Group of orthologs #1361. Best score 148 bits
Score difference with first non-orthologous sequence - C.immitis:148 P.ramorum:148

J3KCD2              	100.00%		H3GGV9              	100.00%
Bootstrap support for J3KCD2 as seed ortholog is 100%.
Bootstrap support for H3GGV9 as seed ortholog is 100%.

Group of orthologs #1362. Best score 148 bits
Score difference with first non-orthologous sequence - C.immitis:148 P.ramorum:148

J3KJI9              	100.00%		H3GNF0              	100.00%
Bootstrap support for J3KJI9 as seed ortholog is 100%.
Bootstrap support for H3GNF0 as seed ortholog is 100%.

Group of orthologs #1363. Best score 148 bits
Score difference with first non-orthologous sequence - C.immitis:148 P.ramorum:63

J3KC49              	100.00%		H3GWK6              	100.00%
Bootstrap support for J3KC49 as seed ortholog is 100%.
Bootstrap support for H3GWK6 as seed ortholog is 85%.

Group of orthologs #1364. Best score 147 bits
Score difference with first non-orthologous sequence - C.immitis:147 P.ramorum:15

J3KBP7              	100.00%		H3G6M5              	100.00%
                    	       		H3G6Z3              	13.87%
                    	       		H3G7X9              	13.87%
                    	       		H3G7K4              	13.45%
                    	       		H3G848              	12.39%
                    	       		H3G7U1              	10.71%
                    	       		H3G595              	6.09%
                    	       		H3G6W2              	5.88%
Bootstrap support for J3KBP7 as seed ortholog is 100%.
Bootstrap support for H3G6M5 as seed ortholog is 91%.

Group of orthologs #1365. Best score 147 bits
Score difference with first non-orthologous sequence - C.immitis:147 P.ramorum:147

J3KHE8              	100.00%		H3GM07              	100.00%
                    	       		H3H9T9              	26.42%
Bootstrap support for J3KHE8 as seed ortholog is 100%.
Bootstrap support for H3GM07 as seed ortholog is 100%.

Group of orthologs #1366. Best score 147 bits
Score difference with first non-orthologous sequence - C.immitis:98 P.ramorum:88

I9NPF2              	100.00%		H3GCK6              	100.00%
Bootstrap support for I9NPF2 as seed ortholog is 99%.
Bootstrap support for H3GCK6 as seed ortholog is 98%.

Group of orthologs #1367. Best score 147 bits
Score difference with first non-orthologous sequence - C.immitis:34 P.ramorum:37

J3K7Z4              	100.00%		H3G8N8              	100.00%
Bootstrap support for J3K7Z4 as seed ortholog is 84%.
Bootstrap support for H3G8N8 as seed ortholog is 86%.

Group of orthologs #1368. Best score 147 bits
Score difference with first non-orthologous sequence - C.immitis:147 P.ramorum:147

J3KK30              	100.00%		H3G850              	100.00%
Bootstrap support for J3KK30 as seed ortholog is 100%.
Bootstrap support for H3G850 as seed ortholog is 100%.

Group of orthologs #1369. Best score 147 bits
Score difference with first non-orthologous sequence - C.immitis:147 P.ramorum:147

J3KKS0              	100.00%		H3G7K0              	100.00%
Bootstrap support for J3KKS0 as seed ortholog is 100%.
Bootstrap support for H3G7K0 as seed ortholog is 100%.

Group of orthologs #1370. Best score 147 bits
Score difference with first non-orthologous sequence - C.immitis:40 P.ramorum:19

J3KEY0              	100.00%		H3HEH4              	100.00%
Bootstrap support for J3KEY0 as seed ortholog is 79%.
Bootstrap support for H3HEH4 as seed ortholog is 67%.
Alternative seed ortholog is H3GKQ5 (19 bits away from this cluster)

Group of orthologs #1371. Best score 146 bits
Score difference with first non-orthologous sequence - C.immitis:146 P.ramorum:146

J3K0P9              	100.00%		H3G7J8              	100.00%
Bootstrap support for J3K0P9 as seed ortholog is 100%.
Bootstrap support for H3G7J8 as seed ortholog is 100%.

Group of orthologs #1372. Best score 146 bits
Score difference with first non-orthologous sequence - C.immitis:46 P.ramorum:15

J3K3C8              	100.00%		H3G513              	100.00%
Bootstrap support for J3K3C8 as seed ortholog is 88%.
Bootstrap support for H3G513 as seed ortholog is 66%.
Alternative seed ortholog is H3GMI2 (15 bits away from this cluster)

Group of orthologs #1373. Best score 146 bits
Score difference with first non-orthologous sequence - C.immitis:146 P.ramorum:146

J3K2I4              	100.00%		H3G6Z2              	100.00%
Bootstrap support for J3K2I4 as seed ortholog is 100%.
Bootstrap support for H3G6Z2 as seed ortholog is 100%.

Group of orthologs #1374. Best score 146 bits
Score difference with first non-orthologous sequence - C.immitis:33 P.ramorum:146

I9NN55              	100.00%		H3GE78              	100.00%
Bootstrap support for I9NN55 as seed ortholog is 93%.
Bootstrap support for H3GE78 as seed ortholog is 100%.

Group of orthologs #1375. Best score 146 bits
Score difference with first non-orthologous sequence - C.immitis:146 P.ramorum:146

J3K1R7              	100.00%		H3GP76              	100.00%
Bootstrap support for J3K1R7 as seed ortholog is 100%.
Bootstrap support for H3GP76 as seed ortholog is 100%.

Group of orthologs #1376. Best score 146 bits
Score difference with first non-orthologous sequence - C.immitis:146 P.ramorum:146

J3K7L1              	100.00%		H3GPC6              	100.00%
Bootstrap support for J3K7L1 as seed ortholog is 100%.
Bootstrap support for H3GPC6 as seed ortholog is 100%.

Group of orthologs #1377. Best score 146 bits
Score difference with first non-orthologous sequence - C.immitis:146 P.ramorum:146

I9NPW4              	100.00%		H3H1L7              	100.00%
Bootstrap support for I9NPW4 as seed ortholog is 100%.
Bootstrap support for H3H1L7 as seed ortholog is 100%.

Group of orthologs #1378. Best score 146 bits
Score difference with first non-orthologous sequence - C.immitis:74 P.ramorum:65

J3K5I3              	100.00%		H3GXG5              	100.00%
Bootstrap support for J3K5I3 as seed ortholog is 99%.
Bootstrap support for H3GXG5 as seed ortholog is 97%.

Group of orthologs #1379. Best score 146 bits
Score difference with first non-orthologous sequence - C.immitis:146 P.ramorum:146

J3KCI2              	100.00%		H3GSL7              	100.00%
Bootstrap support for J3KCI2 as seed ortholog is 100%.
Bootstrap support for H3GSL7 as seed ortholog is 100%.

Group of orthologs #1380. Best score 146 bits
Score difference with first non-orthologous sequence - C.immitis:26 P.ramorum:30

J3KIP1              	100.00%		H3GRN0              	100.00%
Bootstrap support for J3KIP1 as seed ortholog is 86%.
Bootstrap support for H3GRN0 as seed ortholog is 90%.

Group of orthologs #1381. Best score 146 bits
Score difference with first non-orthologous sequence - C.immitis:146 P.ramorum:146

J3KFD5              	100.00%		H3HAS8              	100.00%
Bootstrap support for J3KFD5 as seed ortholog is 100%.
Bootstrap support for H3HAS8 as seed ortholog is 100%.

Group of orthologs #1382. Best score 145 bits
Score difference with first non-orthologous sequence - C.immitis:145 P.ramorum:145

J3KJU6              	100.00%		H3GRA5              	100.00%
                    	       		H3H6C7              	99.69%
Bootstrap support for J3KJU6 as seed ortholog is 100%.
Bootstrap support for H3GRA5 as seed ortholog is 100%.

Group of orthologs #1383. Best score 145 bits
Score difference with first non-orthologous sequence - C.immitis:145 P.ramorum:145

J3K3S0              	100.00%		H3G8U9              	100.00%
Bootstrap support for J3K3S0 as seed ortholog is 100%.
Bootstrap support for H3G8U9 as seed ortholog is 100%.

Group of orthologs #1384. Best score 145 bits
Score difference with first non-orthologous sequence - C.immitis:145 P.ramorum:145

J3KGZ6              	100.00%		H3GIF4              	100.00%
Bootstrap support for J3KGZ6 as seed ortholog is 100%.
Bootstrap support for H3GIF4 as seed ortholog is 100%.

Group of orthologs #1385. Best score 145 bits
Score difference with first non-orthologous sequence - C.immitis:145 P.ramorum:145

J3KGL5              	100.00%		H3GPA5              	100.00%
Bootstrap support for J3KGL5 as seed ortholog is 100%.
Bootstrap support for H3GPA5 as seed ortholog is 100%.

Group of orthologs #1386. Best score 145 bits
Score difference with first non-orthologous sequence - C.immitis:45 P.ramorum:50

J3KL05              	100.00%		H3GS89              	100.00%
Bootstrap support for J3KL05 as seed ortholog is 88%.
Bootstrap support for H3GS89 as seed ortholog is 92%.

Group of orthologs #1387. Best score 145 bits
Score difference with first non-orthologous sequence - C.immitis:145 P.ramorum:145

J3KBF5              	100.00%		H3HDK0              	100.00%
Bootstrap support for J3KBF5 as seed ortholog is 100%.
Bootstrap support for H3HDK0 as seed ortholog is 100%.

Group of orthologs #1388. Best score 145 bits
Score difference with first non-orthologous sequence - C.immitis:145 P.ramorum:145

J3KEZ0              	100.00%		H3HC32              	100.00%
Bootstrap support for J3KEZ0 as seed ortholog is 100%.
Bootstrap support for H3HC32 as seed ortholog is 100%.

Group of orthologs #1389. Best score 144 bits
Score difference with first non-orthologous sequence - C.immitis:144 P.ramorum:33

J3KGE4              	100.00%		H3GJM9              	100.00%
J3K0W6              	16.91%		H3GJN0              	59.11%
J3KK76              	15.73%		H3HBS7              	47.71%
I9XMT2              	6.63%		H3GW29              	37.77%
                    	       		H3GW30              	37.65%
                    	       		H3H0M3              	20.78%
                    	       		H3GZ93              	18.99%
                    	       		H3H0M9              	18.44%
Bootstrap support for J3KGE4 as seed ortholog is 100%.
Bootstrap support for H3GJM9 as seed ortholog is 69%.
Alternative seed ortholog is H3GJ13 (33 bits away from this cluster)

Group of orthologs #1390. Best score 144 bits
Score difference with first non-orthologous sequence - C.immitis:33 P.ramorum:144

J3KJU9              	100.00%		H3G4Z8              	100.00%
J3KB13              	41.76%		H3GAI8              	91.34%
J3K2L8              	8.80%		H3GAI7              	63.10%
Bootstrap support for J3KJU9 as seed ortholog is 86%.
Bootstrap support for H3G4Z8 as seed ortholog is 100%.

Group of orthologs #1391. Best score 144 bits
Score difference with first non-orthologous sequence - C.immitis:144 P.ramorum:144

J3KHI3              	100.00%		H3GJW5              	100.00%
Bootstrap support for J3KHI3 as seed ortholog is 100%.
Bootstrap support for H3GJW5 as seed ortholog is 100%.

Group of orthologs #1392. Best score 144 bits
Score difference with first non-orthologous sequence - C.immitis:144 P.ramorum:59

J3K9M1              	100.00%		H3GUF3              	100.00%
Bootstrap support for J3K9M1 as seed ortholog is 100%.
Bootstrap support for H3GUF3 as seed ortholog is 100%.

Group of orthologs #1393. Best score 144 bits
Score difference with first non-orthologous sequence - C.immitis:144 P.ramorum:82

J3KHL9              	100.00%		H3GQZ6              	100.00%
Bootstrap support for J3KHL9 as seed ortholog is 100%.
Bootstrap support for H3GQZ6 as seed ortholog is 99%.

Group of orthologs #1394. Best score 144 bits
Score difference with first non-orthologous sequence - C.immitis:144 P.ramorum:144

J3KK39              	100.00%		H3HCF2              	100.00%
Bootstrap support for J3KK39 as seed ortholog is 100%.
Bootstrap support for H3HCF2 as seed ortholog is 100%.

Group of orthologs #1395. Best score 143 bits
Score difference with first non-orthologous sequence - C.immitis:143 P.ramorum:143

J3KBX9              	100.00%		H3GEK1              	100.00%
                    	       		H3GEK3              	96.49%
Bootstrap support for J3KBX9 as seed ortholog is 100%.
Bootstrap support for H3GEK1 as seed ortholog is 100%.

Group of orthologs #1396. Best score 143 bits
Score difference with first non-orthologous sequence - C.immitis:143 P.ramorum:143

J3K7R0              	100.00%		H3GZ52              	100.00%
                    	       		H3H7X2              	56.82%
Bootstrap support for J3K7R0 as seed ortholog is 100%.
Bootstrap support for H3GZ52 as seed ortholog is 100%.

Group of orthologs #1397. Best score 143 bits
Score difference with first non-orthologous sequence - C.immitis:143 P.ramorum:143

J3KJQ8              	100.00%		H3GUB2              	100.00%
                    	       		H3HD49              	42.60%
Bootstrap support for J3KJQ8 as seed ortholog is 100%.
Bootstrap support for H3GUB2 as seed ortholog is 100%.

Group of orthologs #1398. Best score 143 bits
Score difference with first non-orthologous sequence - C.immitis:143 P.ramorum:143

J3K336              	100.00%		H3GJE0              	100.00%
Bootstrap support for J3K336 as seed ortholog is 100%.
Bootstrap support for H3GJE0 as seed ortholog is 100%.

Group of orthologs #1399. Best score 143 bits
Score difference with first non-orthologous sequence - C.immitis:143 P.ramorum:143

J3KCT1              	100.00%		H3GAE0              	100.00%
Bootstrap support for J3KCT1 as seed ortholog is 100%.
Bootstrap support for H3GAE0 as seed ortholog is 100%.

Group of orthologs #1400. Best score 143 bits
Score difference with first non-orthologous sequence - C.immitis:143 P.ramorum:143

J3KBI1              	100.00%		H3GLC6              	100.00%
Bootstrap support for J3KBI1 as seed ortholog is 100%.
Bootstrap support for H3GLC6 as seed ortholog is 100%.

Group of orthologs #1401. Best score 143 bits
Score difference with first non-orthologous sequence - C.immitis:143 P.ramorum:143

J3KB94              	100.00%		H3GMB5              	100.00%
Bootstrap support for J3KB94 as seed ortholog is 100%.
Bootstrap support for H3GMB5 as seed ortholog is 100%.

Group of orthologs #1402. Best score 143 bits
Score difference with first non-orthologous sequence - C.immitis:143 P.ramorum:143

J3K7L9              	100.00%		H3GSN7              	100.00%
Bootstrap support for J3K7L9 as seed ortholog is 100%.
Bootstrap support for H3GSN7 as seed ortholog is 100%.

Group of orthologs #1403. Best score 143 bits
Score difference with first non-orthologous sequence - C.immitis:143 P.ramorum:32

J3K8J5              	100.00%		H3GVS8              	100.00%
Bootstrap support for J3K8J5 as seed ortholog is 100%.
Bootstrap support for H3GVS8 as seed ortholog is 60%.
Alternative seed ortholog is H3GKJ7 (32 bits away from this cluster)

Group of orthologs #1404. Best score 143 bits
Score difference with first non-orthologous sequence - C.immitis:143 P.ramorum:143

J3KHT1              	100.00%		H3H7F2              	100.00%
Bootstrap support for J3KHT1 as seed ortholog is 100%.
Bootstrap support for H3H7F2 as seed ortholog is 100%.

Group of orthologs #1405. Best score 143 bits
Score difference with first non-orthologous sequence - C.immitis:143 P.ramorum:143

Q1DJR8              	100.00%		H3H8V7              	100.00%
Bootstrap support for Q1DJR8 as seed ortholog is 100%.
Bootstrap support for H3H8V7 as seed ortholog is 100%.

Group of orthologs #1406. Best score 143 bits
Score difference with first non-orthologous sequence - C.immitis:94 P.ramorum:143

Q1DTI6              	100.00%		H3HCK3              	100.00%
Bootstrap support for Q1DTI6 as seed ortholog is 97%.
Bootstrap support for H3HCK3 as seed ortholog is 100%.

Group of orthologs #1407. Best score 142 bits
Score difference with first non-orthologous sequence - C.immitis:43 P.ramorum:142

J3K3K3              	100.00%		H3G8Q2              	100.00%
                    	       		H3G8Q1              	81.31%
                    	       		H3GBA6              	50.79%
                    	       		H3G6L6              	50.09%
                    	       		H3GCX4              	49.91%
                    	       		H3G8A2              	49.74%
                    	       		H3G9N4              	47.97%
                    	       		H3G6L8              	47.80%
                    	       		H3G6S3              	47.44%
                    	       		H3G6L9              	46.91%
                    	       		H3G9S3              	46.03%
                    	       		H3G6U7              	45.86%
                    	       		H3GA92              	45.50%
                    	       		H3GA91              	44.97%
                    	       		H3GCW9              	44.97%
                    	       		H3GCX6              	44.80%
                    	       		H3GCW8              	43.92%
                    	       		H3GA93              	42.68%
                    	       		H3G864              	41.27%
                    	       		H3GYJ8              	41.09%
                    	       		H3GCX7              	40.21%
Bootstrap support for J3K3K3 as seed ortholog is 85%.
Bootstrap support for H3G8Q2 as seed ortholog is 100%.

Group of orthologs #1408. Best score 142 bits
Score difference with first non-orthologous sequence - C.immitis:142 P.ramorum:15

I9NM14              	100.00%		H3GEH0              	100.00%
Bootstrap support for I9NM14 as seed ortholog is 100%.
Bootstrap support for H3GEH0 as seed ortholog is 63%.
Alternative seed ortholog is H3GYJ3 (15 bits away from this cluster)

Group of orthologs #1409. Best score 142 bits
Score difference with first non-orthologous sequence - C.immitis:12 P.ramorum:21

J3KHH1              	100.00%		H3GFT3              	100.00%
Bootstrap support for J3KHH1 as seed ortholog is 55%.
Alternative seed ortholog is J3KK35 (12 bits away from this cluster)
Bootstrap support for H3GFT3 as seed ortholog is 72%.
Alternative seed ortholog is H3H2I2 (21 bits away from this cluster)

Group of orthologs #1410. Best score 142 bits
Score difference with first non-orthologous sequence - C.immitis:142 P.ramorum:142

J3K2L2              	100.00%		H3GXT3              	100.00%
Bootstrap support for J3K2L2 as seed ortholog is 100%.
Bootstrap support for H3GXT3 as seed ortholog is 100%.

Group of orthologs #1411. Best score 142 bits
Score difference with first non-orthologous sequence - C.immitis:142 P.ramorum:142

Q1E5A9              	100.00%		H3GKQ2              	100.00%
Bootstrap support for Q1E5A9 as seed ortholog is 100%.
Bootstrap support for H3GKQ2 as seed ortholog is 100%.

Group of orthologs #1412. Best score 142 bits
Score difference with first non-orthologous sequence - C.immitis:142 P.ramorum:142

J3KDP5              	100.00%		H3GV00              	100.00%
Bootstrap support for J3KDP5 as seed ortholog is 100%.
Bootstrap support for H3GV00 as seed ortholog is 100%.

Group of orthologs #1413. Best score 142 bits
Score difference with first non-orthologous sequence - C.immitis:142 P.ramorum:142

J3K2I5              	100.00%		H3HB24              	100.00%
Bootstrap support for J3K2I5 as seed ortholog is 100%.
Bootstrap support for H3HB24 as seed ortholog is 100%.

Group of orthologs #1414. Best score 141 bits
Score difference with first non-orthologous sequence - C.immitis:141 P.ramorum:141

J0HHB3              	100.00%		H3GJV7              	100.00%
                    	       		H3GJV8              	100.00%
Bootstrap support for J0HHB3 as seed ortholog is 100%.
Bootstrap support for H3GJV7 as seed ortholog is 100%.
Bootstrap support for H3GJV8 as seed ortholog is 100%.

Group of orthologs #1415. Best score 141 bits
Score difference with first non-orthologous sequence - C.immitis:141 P.ramorum:141

J0HG50              	100.00%		H3GAN1              	100.00%
Bootstrap support for J0HG50 as seed ortholog is 100%.
Bootstrap support for H3GAN1 as seed ortholog is 100%.

Group of orthologs #1416. Best score 141 bits
Score difference with first non-orthologous sequence - C.immitis:51 P.ramorum:7

J3K7A7              	100.00%		H3G7X8              	100.00%
Bootstrap support for J3K7A7 as seed ortholog is 97%.
Bootstrap support for H3G7X8 as seed ortholog is 38%.
Alternative seed ortholog is H3G7R5 (7 bits away from this cluster)

Group of orthologs #1417. Best score 141 bits
Score difference with first non-orthologous sequence - C.immitis:141 P.ramorum:141

J3K6R0              	100.00%		H3G8U8              	100.00%
Bootstrap support for J3K6R0 as seed ortholog is 100%.
Bootstrap support for H3G8U8 as seed ortholog is 100%.

Group of orthologs #1418. Best score 141 bits
Score difference with first non-orthologous sequence - C.immitis:141 P.ramorum:141

J3KEI7              	100.00%		H3GSB4              	100.00%
Bootstrap support for J3KEI7 as seed ortholog is 100%.
Bootstrap support for H3GSB4 as seed ortholog is 100%.

Group of orthologs #1419. Best score 141 bits
Score difference with first non-orthologous sequence - C.immitis:141 P.ramorum:141

J3KL07              	100.00%		H3H6K8              	100.00%
Bootstrap support for J3KL07 as seed ortholog is 100%.
Bootstrap support for H3H6K8 as seed ortholog is 100%.

Group of orthologs #1420. Best score 140 bits
Score difference with first non-orthologous sequence - C.immitis:140 P.ramorum:140

J3KE68              	100.00%		H3G8G5              	100.00%
                    	       		H3G8G4              	44.34%
Bootstrap support for J3KE68 as seed ortholog is 100%.
Bootstrap support for H3G8G5 as seed ortholog is 100%.

Group of orthologs #1421. Best score 140 bits
Score difference with first non-orthologous sequence - C.immitis:140 P.ramorum:140

J3K2Q4              	100.00%		H3G9X2              	100.00%
Bootstrap support for J3K2Q4 as seed ortholog is 100%.
Bootstrap support for H3G9X2 as seed ortholog is 100%.

Group of orthologs #1422. Best score 140 bits
Score difference with first non-orthologous sequence - C.immitis:140 P.ramorum:46

J3K716              	100.00%		H3G8V4              	100.00%
Bootstrap support for J3K716 as seed ortholog is 100%.
Bootstrap support for H3G8V4 as seed ortholog is 88%.

Group of orthologs #1423. Best score 140 bits
Score difference with first non-orthologous sequence - C.immitis:140 P.ramorum:140

J3K6P4              	100.00%		H3GAS8              	100.00%
Bootstrap support for J3K6P4 as seed ortholog is 100%.
Bootstrap support for H3GAS8 as seed ortholog is 100%.

Group of orthologs #1424. Best score 140 bits
Score difference with first non-orthologous sequence - C.immitis:140 P.ramorum:140

J3KEA0              	100.00%		H3G8P8              	100.00%
Bootstrap support for J3KEA0 as seed ortholog is 100%.
Bootstrap support for H3G8P8 as seed ortholog is 100%.

Group of orthologs #1425. Best score 140 bits
Score difference with first non-orthologous sequence - C.immitis:140 P.ramorum:48

J3K4L3              	100.00%		H3GVK9              	100.00%
Bootstrap support for J3K4L3 as seed ortholog is 100%.
Bootstrap support for H3GVK9 as seed ortholog is 89%.

Group of orthologs #1426. Best score 140 bits
Score difference with first non-orthologous sequence - C.immitis:140 P.ramorum:140

J3K2M3              	100.00%		H3GY54              	100.00%
Bootstrap support for J3K2M3 as seed ortholog is 100%.
Bootstrap support for H3GY54 as seed ortholog is 100%.

Group of orthologs #1427. Best score 140 bits
Score difference with first non-orthologous sequence - C.immitis:140 P.ramorum:140

J3KFG6              	100.00%		H3GMV0              	100.00%
Bootstrap support for J3KFG6 as seed ortholog is 100%.
Bootstrap support for H3GMV0 as seed ortholog is 100%.

Group of orthologs #1428. Best score 140 bits
Score difference with first non-orthologous sequence - C.immitis:140 P.ramorum:140

J3K3R1              	100.00%		H3H5S3              	100.00%
Bootstrap support for J3K3R1 as seed ortholog is 100%.
Bootstrap support for H3H5S3 as seed ortholog is 100%.

Group of orthologs #1429. Best score 139 bits
Score difference with first non-orthologous sequence - C.immitis:139 P.ramorum:139

J3K2E7              	100.00%		H3GBC5              	100.00%
Bootstrap support for J3K2E7 as seed ortholog is 100%.
Bootstrap support for H3GBC5 as seed ortholog is 100%.

Group of orthologs #1430. Best score 139 bits
Score difference with first non-orthologous sequence - C.immitis:43 P.ramorum:46

J3K8I4              	100.00%		H3G694              	100.00%
Bootstrap support for J3K8I4 as seed ortholog is 97%.
Bootstrap support for H3G694 as seed ortholog is 97%.

Group of orthologs #1431. Best score 139 bits
Score difference with first non-orthologous sequence - C.immitis:139 P.ramorum:139

J3K742              	100.00%		H3GFL4              	100.00%
Bootstrap support for J3K742 as seed ortholog is 100%.
Bootstrap support for H3GFL4 as seed ortholog is 100%.

Group of orthologs #1432. Best score 139 bits
Score difference with first non-orthologous sequence - C.immitis:139 P.ramorum:139

J3KBY3              	100.00%		H3GCH0              	100.00%
Bootstrap support for J3KBY3 as seed ortholog is 100%.
Bootstrap support for H3GCH0 as seed ortholog is 100%.

Group of orthologs #1433. Best score 139 bits
Score difference with first non-orthologous sequence - C.immitis:139 P.ramorum:139

J3K4K9              	100.00%		H3GNS6              	100.00%
Bootstrap support for J3K4K9 as seed ortholog is 100%.
Bootstrap support for H3GNS6 as seed ortholog is 100%.

Group of orthologs #1434. Best score 139 bits
Score difference with first non-orthologous sequence - C.immitis:139 P.ramorum:139

J0HIA1              	100.00%		H3GTF9              	100.00%
Bootstrap support for J0HIA1 as seed ortholog is 100%.
Bootstrap support for H3GTF9 as seed ortholog is 100%.

Group of orthologs #1435. Best score 139 bits
Score difference with first non-orthologous sequence - C.immitis:139 P.ramorum:139

J3KL84              	100.00%		H3GKI4              	100.00%
Bootstrap support for J3KL84 as seed ortholog is 100%.
Bootstrap support for H3GKI4 as seed ortholog is 100%.

Group of orthologs #1436. Best score 139 bits
Score difference with first non-orthologous sequence - C.immitis:139 P.ramorum:139

J3KES3              	100.00%		H3GSP4              	100.00%
Bootstrap support for J3KES3 as seed ortholog is 100%.
Bootstrap support for H3GSP4 as seed ortholog is 100%.

Group of orthologs #1437. Best score 139 bits
Score difference with first non-orthologous sequence - C.immitis:139 P.ramorum:139

J3KF79              	100.00%		H3HBN8              	100.00%
Bootstrap support for J3KF79 as seed ortholog is 100%.
Bootstrap support for H3HBN8 as seed ortholog is 100%.

Group of orthologs #1438. Best score 138 bits
Score difference with first non-orthologous sequence - C.immitis:138 P.ramorum:138

J3KFW4              	100.00%		H3GAM3              	100.00%
                    	       		H3GB06              	77.28%
                    	       		H3HB96              	34.17%
                    	       		H3H2V8              	13.59%
Bootstrap support for J3KFW4 as seed ortholog is 100%.
Bootstrap support for H3GAM3 as seed ortholog is 100%.

Group of orthologs #1439. Best score 138 bits
Score difference with first non-orthologous sequence - C.immitis:138 P.ramorum:138

J0HGR4              	100.00%		H3G8Z5              	100.00%
Bootstrap support for J0HGR4 as seed ortholog is 100%.
Bootstrap support for H3G8Z5 as seed ortholog is 100%.

Group of orthologs #1440. Best score 138 bits
Score difference with first non-orthologous sequence - C.immitis:138 P.ramorum:138

J3K1W8              	100.00%		H3G946              	100.00%
Bootstrap support for J3K1W8 as seed ortholog is 100%.
Bootstrap support for H3G946 as seed ortholog is 100%.

Group of orthologs #1441. Best score 138 bits
Score difference with first non-orthologous sequence - C.immitis:138 P.ramorum:138

J3KKQ1              	100.00%		H3GNK7              	100.00%
Bootstrap support for J3KKQ1 as seed ortholog is 100%.
Bootstrap support for H3GNK7 as seed ortholog is 100%.

Group of orthologs #1442. Best score 138 bits
Score difference with first non-orthologous sequence - C.immitis:138 P.ramorum:138

J3KDK1              	100.00%		H3GZH2              	100.00%
Bootstrap support for J3KDK1 as seed ortholog is 100%.
Bootstrap support for H3GZH2 as seed ortholog is 100%.

Group of orthologs #1443. Best score 137 bits
Score difference with first non-orthologous sequence - C.immitis:137 P.ramorum:137

I9XL65              	100.00%		H3GA71              	100.00%
                    	       		H3G9U1              	100.00%
Bootstrap support for I9XL65 as seed ortholog is 100%.
Bootstrap support for H3GA71 as seed ortholog is 100%.
Bootstrap support for H3G9U1 as seed ortholog is 100%.

Group of orthologs #1444. Best score 137 bits
Score difference with first non-orthologous sequence - C.immitis:137 P.ramorum:137

I9NLH7              	100.00%		H3G5A2              	100.00%
Bootstrap support for I9NLH7 as seed ortholog is 100%.
Bootstrap support for H3G5A2 as seed ortholog is 100%.

Group of orthologs #1445. Best score 137 bits
Score difference with first non-orthologous sequence - C.immitis:137 P.ramorum:137

J0HGK9              	100.00%		H3G581              	100.00%
Bootstrap support for J0HGK9 as seed ortholog is 100%.
Bootstrap support for H3G581 as seed ortholog is 100%.

Group of orthologs #1446. Best score 137 bits
Score difference with first non-orthologous sequence - C.immitis:137 P.ramorum:137

Q1E9X9              	100.00%		H3GZ44              	100.00%
Bootstrap support for Q1E9X9 as seed ortholog is 100%.
Bootstrap support for H3GZ44 as seed ortholog is 100%.

Group of orthologs #1447. Best score 136 bits
Score difference with first non-orthologous sequence - C.immitis:136 P.ramorum:136

J3K8J7              	100.00%		H3GH72              	100.00%
Bootstrap support for J3K8J7 as seed ortholog is 100%.
Bootstrap support for H3GH72 as seed ortholog is 100%.

Group of orthologs #1448. Best score 136 bits
Score difference with first non-orthologous sequence - C.immitis:136 P.ramorum:136

J3KJA0              	100.00%		H3GHZ3              	100.00%
Bootstrap support for J3KJA0 as seed ortholog is 100%.
Bootstrap support for H3GHZ3 as seed ortholog is 100%.

Group of orthologs #1449. Best score 136 bits
Score difference with first non-orthologous sequence - C.immitis:136 P.ramorum:136

J3K1B2              	100.00%		H3H2Y2              	100.00%
Bootstrap support for J3K1B2 as seed ortholog is 100%.
Bootstrap support for H3H2Y2 as seed ortholog is 100%.

Group of orthologs #1450. Best score 136 bits
Score difference with first non-orthologous sequence - C.immitis:136 P.ramorum:136

J3KCG6              	100.00%		H3GZE6              	100.00%
Bootstrap support for J3KCG6 as seed ortholog is 100%.
Bootstrap support for H3GZE6 as seed ortholog is 100%.

Group of orthologs #1451. Best score 136 bits
Score difference with first non-orthologous sequence - C.immitis:70 P.ramorum:136

J3KFE7              	100.00%		H3GZW9              	100.00%
Bootstrap support for J3KFE7 as seed ortholog is 97%.
Bootstrap support for H3GZW9 as seed ortholog is 100%.

Group of orthologs #1452. Best score 136 bits
Score difference with first non-orthologous sequence - C.immitis:136 P.ramorum:136

J3KDZ9              	100.00%		H3HB20              	100.00%
Bootstrap support for J3KDZ9 as seed ortholog is 100%.
Bootstrap support for H3HB20 as seed ortholog is 100%.

Group of orthologs #1453. Best score 135 bits
Score difference with first non-orthologous sequence - C.immitis:56 P.ramorum:78

J3K189              	100.00%		H3G9M9              	100.00%
                    	       		H3G8Z3              	24.60%
                    	       		H3GB66              	21.80%
                    	       		H3GJP2              	14.20%
Bootstrap support for J3K189 as seed ortholog is 93%.
Bootstrap support for H3G9M9 as seed ortholog is 97%.

Group of orthologs #1454. Best score 135 bits
Score difference with first non-orthologous sequence - C.immitis:17 P.ramorum:135

J3K272              	100.00%		H3GH98              	100.00%
Bootstrap support for J3K272 as seed ortholog is 71%.
Alternative seed ortholog is J3KBA8 (17 bits away from this cluster)
Bootstrap support for H3GH98 as seed ortholog is 100%.

Group of orthologs #1455. Best score 135 bits
Score difference with first non-orthologous sequence - C.immitis:135 P.ramorum:135

J3K6I9              	100.00%		H3GE71              	100.00%
Bootstrap support for J3K6I9 as seed ortholog is 100%.
Bootstrap support for H3GE71 as seed ortholog is 100%.

Group of orthologs #1456. Best score 135 bits
Score difference with first non-orthologous sequence - C.immitis:135 P.ramorum:135

J3K685              	100.00%		H3GFD9              	100.00%
Bootstrap support for J3K685 as seed ortholog is 100%.
Bootstrap support for H3GFD9 as seed ortholog is 100%.

Group of orthologs #1457. Best score 135 bits
Score difference with first non-orthologous sequence - C.immitis:135 P.ramorum:135

J3KLG5              	100.00%		H3H0Z2              	100.00%
Bootstrap support for J3KLG5 as seed ortholog is 100%.
Bootstrap support for H3H0Z2 as seed ortholog is 100%.

Group of orthologs #1458. Best score 135 bits
Score difference with first non-orthologous sequence - C.immitis:135 P.ramorum:135

Q1DJR2              	100.00%		H3HB09              	100.00%
Bootstrap support for Q1DJR2 as seed ortholog is 100%.
Bootstrap support for H3HB09 as seed ortholog is 100%.

Group of orthologs #1459. Best score 134 bits
Score difference with first non-orthologous sequence - C.immitis:83 P.ramorum:134

J3KHT5              	100.00%		H3H379              	100.00%
J3K9M4              	37.29%		H3G567              	53.48%
Bootstrap support for J3KHT5 as seed ortholog is 98%.
Bootstrap support for H3H379 as seed ortholog is 100%.

Group of orthologs #1460. Best score 134 bits
Score difference with first non-orthologous sequence - C.immitis:134 P.ramorum:58

J3KF00              	100.00%		H3GAG4              	100.00%
Bootstrap support for J3KF00 as seed ortholog is 100%.
Bootstrap support for H3GAG4 as seed ortholog is 99%.

Group of orthologs #1461. Best score 134 bits
Score difference with first non-orthologous sequence - C.immitis:80 P.ramorum:13

J3KK62              	100.00%		H3GPZ2              	100.00%
Bootstrap support for J3KK62 as seed ortholog is 96%.
Bootstrap support for H3GPZ2 as seed ortholog is 62%.
Alternative seed ortholog is H3GRD8 (13 bits away from this cluster)

Group of orthologs #1462. Best score 134 bits
Score difference with first non-orthologous sequence - C.immitis:134 P.ramorum:134

Q1DK38              	100.00%		H3GS58              	100.00%
Bootstrap support for Q1DK38 as seed ortholog is 100%.
Bootstrap support for H3GS58 as seed ortholog is 100%.

Group of orthologs #1463. Best score 134 bits
Score difference with first non-orthologous sequence - C.immitis:134 P.ramorum:134

J3K6D2              	100.00%		H3HD68              	100.00%
Bootstrap support for J3K6D2 as seed ortholog is 100%.
Bootstrap support for H3HD68 as seed ortholog is 100%.

Group of orthologs #1464. Best score 133 bits
Score difference with first non-orthologous sequence - C.immitis:133 P.ramorum:133

J3K333              	100.00%		H3HD62              	100.00%
                    	       		H3G5A3              	92.06%
Bootstrap support for J3K333 as seed ortholog is 100%.
Bootstrap support for H3HD62 as seed ortholog is 100%.

Group of orthologs #1465. Best score 133 bits
Score difference with first non-orthologous sequence - C.immitis:133 P.ramorum:133

J0HGD4              	100.00%		H3G548              	100.00%
Bootstrap support for J0HGD4 as seed ortholog is 100%.
Bootstrap support for H3G548 as seed ortholog is 100%.

Group of orthologs #1466. Best score 133 bits
Score difference with first non-orthologous sequence - C.immitis:133 P.ramorum:133

J3K2H4              	100.00%		H3G9B7              	100.00%
Bootstrap support for J3K2H4 as seed ortholog is 100%.
Bootstrap support for H3G9B7 as seed ortholog is 100%.

Group of orthologs #1467. Best score 133 bits
Score difference with first non-orthologous sequence - C.immitis:133 P.ramorum:133

J3K1T2              	100.00%		H3GIT3              	100.00%
Bootstrap support for J3K1T2 as seed ortholog is 100%.
Bootstrap support for H3GIT3 as seed ortholog is 100%.

Group of orthologs #1468. Best score 133 bits
Score difference with first non-orthologous sequence - C.immitis:133 P.ramorum:133

J3KAC5              	100.00%		H3GBM4              	100.00%
Bootstrap support for J3KAC5 as seed ortholog is 100%.
Bootstrap support for H3GBM4 as seed ortholog is 100%.

Group of orthologs #1469. Best score 133 bits
Score difference with first non-orthologous sequence - C.immitis:45 P.ramorum:133

J3KDL2              	100.00%		H3G9J1              	100.00%
Bootstrap support for J3KDL2 as seed ortholog is 81%.
Bootstrap support for H3G9J1 as seed ortholog is 100%.

Group of orthologs #1470. Best score 133 bits
Score difference with first non-orthologous sequence - C.immitis:133 P.ramorum:4

J3KDY9              	100.00%		H3GBM1              	100.00%
Bootstrap support for J3KDY9 as seed ortholog is 100%.
Bootstrap support for H3GBM1 as seed ortholog is 62%.
Alternative seed ortholog is H3H0Q4 (4 bits away from this cluster)

Group of orthologs #1471. Best score 133 bits
Score difference with first non-orthologous sequence - C.immitis:133 P.ramorum:133

J3KIM5              	100.00%		H3GWV5              	100.00%
Bootstrap support for J3KIM5 as seed ortholog is 100%.
Bootstrap support for H3GWV5 as seed ortholog is 100%.

Group of orthologs #1472. Best score 133 bits
Score difference with first non-orthologous sequence - C.immitis:56 P.ramorum:133

J3KIL8              	100.00%		H3H174              	100.00%
Bootstrap support for J3KIL8 as seed ortholog is 98%.
Bootstrap support for H3H174 as seed ortholog is 100%.

Group of orthologs #1473. Best score 133 bits
Score difference with first non-orthologous sequence - C.immitis:133 P.ramorum:133

J3KIL1              	100.00%		H3HCW0              	100.00%
Bootstrap support for J3KIL1 as seed ortholog is 100%.
Bootstrap support for H3HCW0 as seed ortholog is 100%.

Group of orthologs #1474. Best score 132 bits
Score difference with first non-orthologous sequence - C.immitis:45 P.ramorum:26

J3KE23              	100.00%		H3GA70              	100.00%
J3KAQ4              	29.88%		H3GM06              	21.64%
Bootstrap support for J3KE23 as seed ortholog is 83%.
Bootstrap support for H3GA70 as seed ortholog is 65%.
Alternative seed ortholog is H3H338 (26 bits away from this cluster)

Group of orthologs #1475. Best score 132 bits
Score difference with first non-orthologous sequence - C.immitis:54 P.ramorum:132

J3K704              	100.00%		H3G667              	100.00%
                    	       		H3G7Z0              	8.26%
Bootstrap support for J3K704 as seed ortholog is 90%.
Bootstrap support for H3G667 as seed ortholog is 100%.

Group of orthologs #1476. Best score 132 bits
Score difference with first non-orthologous sequence - C.immitis:132 P.ramorum:132

J3K2R0              	100.00%		H3G7Q5              	100.00%
Bootstrap support for J3K2R0 as seed ortholog is 100%.
Bootstrap support for H3G7Q5 as seed ortholog is 100%.

Group of orthologs #1477. Best score 132 bits
Score difference with first non-orthologous sequence - C.immitis:132 P.ramorum:132

J3K2W6              	100.00%		H3GA64              	100.00%
Bootstrap support for J3K2W6 as seed ortholog is 100%.
Bootstrap support for H3GA64 as seed ortholog is 100%.

Group of orthologs #1478. Best score 132 bits
Score difference with first non-orthologous sequence - C.immitis:132 P.ramorum:132

J3KD06              	100.00%		H3G5I3              	100.00%
Bootstrap support for J3KD06 as seed ortholog is 100%.
Bootstrap support for H3G5I3 as seed ortholog is 100%.

Group of orthologs #1479. Best score 132 bits
Score difference with first non-orthologous sequence - C.immitis:132 P.ramorum:132

J3KE83              	100.00%		H3G9V9              	100.00%
Bootstrap support for J3KE83 as seed ortholog is 100%.
Bootstrap support for H3G9V9 as seed ortholog is 100%.

Group of orthologs #1480. Best score 131 bits
Score difference with first non-orthologous sequence - C.immitis:131 P.ramorum:35

J3KM04              	100.00%		H3GI81              	100.00%
J3K4S1              	6.46%		
Bootstrap support for J3KM04 as seed ortholog is 100%.
Bootstrap support for H3GI81 as seed ortholog is 83%.

Group of orthologs #1481. Best score 131 bits
Score difference with first non-orthologous sequence - C.immitis:39 P.ramorum:131

J0HF24              	100.00%		H3GUG3              	100.00%
Bootstrap support for J0HF24 as seed ortholog is 88%.
Bootstrap support for H3GUG3 as seed ortholog is 100%.

Group of orthologs #1482. Best score 131 bits
Score difference with first non-orthologous sequence - C.immitis:34 P.ramorum:62

J3KK15              	100.00%		H3G8F4              	100.00%
Bootstrap support for J3KK15 as seed ortholog is 93%.
Bootstrap support for H3G8F4 as seed ortholog is 99%.

Group of orthologs #1483. Best score 131 bits
Score difference with first non-orthologous sequence - C.immitis:38 P.ramorum:16

J3KA88              	100.00%		H3GIC5              	100.00%
Bootstrap support for J3KA88 as seed ortholog is 82%.
Bootstrap support for H3GIC5 as seed ortholog is 64%.
Alternative seed ortholog is H3GMI9 (16 bits away from this cluster)

Group of orthologs #1484. Best score 131 bits
Score difference with first non-orthologous sequence - C.immitis:131 P.ramorum:131

J3KIF2              	100.00%		H3GAE3              	100.00%
Bootstrap support for J3KIF2 as seed ortholog is 100%.
Bootstrap support for H3GAE3 as seed ortholog is 100%.

Group of orthologs #1485. Best score 131 bits
Score difference with first non-orthologous sequence - C.immitis:131 P.ramorum:131

J3KDK2              	100.00%		H3GQH7              	100.00%
Bootstrap support for J3KDK2 as seed ortholog is 100%.
Bootstrap support for H3GQH7 as seed ortholog is 100%.

Group of orthologs #1486. Best score 131 bits
Score difference with first non-orthologous sequence - C.immitis:131 P.ramorum:131

J3KM32              	100.00%		H3GMN0              	100.00%
Bootstrap support for J3KM32 as seed ortholog is 100%.
Bootstrap support for H3GMN0 as seed ortholog is 100%.

Group of orthologs #1487. Best score 130 bits
Score difference with first non-orthologous sequence - C.immitis:27 P.ramorum:130

J3K496              	100.00%		H3GR24              	100.00%
                    	       		H3GHL5              	76.01%
                    	       		H3GHL6              	57.17%
                    	       		H3GHL4              	51.56%
                    	       		H3H3A1              	22.43%
Bootstrap support for J3K496 as seed ortholog is 75%.
Bootstrap support for H3GR24 as seed ortholog is 100%.

Group of orthologs #1488. Best score 130 bits
Score difference with first non-orthologous sequence - C.immitis:19 P.ramorum:130

J3KBN8              	100.00%		H3GL40              	100.00%
Q1DVI3              	13.24%		
J3K1V1              	8.64%		
Bootstrap support for J3KBN8 as seed ortholog is 69%.
Alternative seed ortholog is J3KCL9 (19 bits away from this cluster)
Bootstrap support for H3GL40 as seed ortholog is 100%.

Group of orthologs #1489. Best score 130 bits
Score difference with first non-orthologous sequence - C.immitis:130 P.ramorum:130

J0HE12              	100.00%		H3GA04              	100.00%
Bootstrap support for J0HE12 as seed ortholog is 100%.
Bootstrap support for H3GA04 as seed ortholog is 100%.

Group of orthologs #1490. Best score 130 bits
Score difference with first non-orthologous sequence - C.immitis:130 P.ramorum:130

J3KGI2              	100.00%		H3GM91              	100.00%
Bootstrap support for J3KGI2 as seed ortholog is 100%.
Bootstrap support for H3GM91 as seed ortholog is 100%.

Group of orthologs #1491. Best score 129 bits
Score difference with first non-orthologous sequence - C.immitis:36 P.ramorum:50

J3KJQ6              	100.00%		H3G5J8              	100.00%
                    	       		H3GIR6              	37.77%
                    	       		H3GIR5              	36.78%
                    	       		H3G8W3              	27.83%
                    	       		H3GB45              	27.83%
                    	       		H3H7P7              	26.64%
                    	       		H3GIR3              	25.45%
                    	       		H3GDL1              	25.05%
Bootstrap support for J3KJQ6 as seed ortholog is 79%.
Bootstrap support for H3G5J8 as seed ortholog is 89%.

Group of orthologs #1492. Best score 129 bits
Score difference with first non-orthologous sequence - C.immitis:129 P.ramorum:129

J3KFH2              	100.00%		H3GA35              	100.00%
                    	       		H3GTL0              	24.87%
                    	       		H3H2N4              	24.87%
                    	       		H3GTL1              	22.87%
Bootstrap support for J3KFH2 as seed ortholog is 100%.
Bootstrap support for H3GA35 as seed ortholog is 100%.

Group of orthologs #1493. Best score 129 bits
Score difference with first non-orthologous sequence - C.immitis:48 P.ramorum:129

J3KA10              	100.00%		H3GMA7              	100.00%
                    	       		H3GGY9              	52.25%
                    	       		H3GM42              	15.36%
Bootstrap support for J3KA10 as seed ortholog is 92%.
Bootstrap support for H3GMA7 as seed ortholog is 100%.

Group of orthologs #1494. Best score 129 bits
Score difference with first non-orthologous sequence - C.immitis:129 P.ramorum:46

J3K0I6              	100.00%		H3G551              	100.00%
                    	       		H3GIS8              	12.14%
Bootstrap support for J3K0I6 as seed ortholog is 100%.
Bootstrap support for H3G551 as seed ortholog is 93%.

Group of orthologs #1495. Best score 129 bits
Score difference with first non-orthologous sequence - C.immitis:129 P.ramorum:129

I9XIW9              	100.00%		H3GZA4              	100.00%
                    	       		H3H9R8              	100.00%
Bootstrap support for I9XIW9 as seed ortholog is 100%.
Bootstrap support for H3GZA4 as seed ortholog is 100%.
Bootstrap support for H3H9R8 as seed ortholog is 100%.

Group of orthologs #1496. Best score 129 bits
Score difference with first non-orthologous sequence - C.immitis:82 P.ramorum:129

I9NR56              	100.00%		H3G7M5              	100.00%
Bootstrap support for I9NR56 as seed ortholog is 99%.
Bootstrap support for H3G7M5 as seed ortholog is 100%.

Group of orthologs #1497. Best score 129 bits
Score difference with first non-orthologous sequence - C.immitis:129 P.ramorum:129

J3K9D2              	100.00%		H3G9J7              	100.00%
Bootstrap support for J3K9D2 as seed ortholog is 100%.
Bootstrap support for H3G9J7 as seed ortholog is 100%.

Group of orthologs #1498. Best score 129 bits
Score difference with first non-orthologous sequence - C.immitis:129 P.ramorum:129

J3K8L8              	100.00%		H3GKX8              	100.00%
Bootstrap support for J3K8L8 as seed ortholog is 100%.
Bootstrap support for H3GKX8 as seed ortholog is 100%.

Group of orthologs #1499. Best score 129 bits
Score difference with first non-orthologous sequence - C.immitis:129 P.ramorum:23

J3K881              	100.00%		H3GRN8              	100.00%
Bootstrap support for J3K881 as seed ortholog is 100%.
Bootstrap support for H3GRN8 as seed ortholog is 73%.
Alternative seed ortholog is H3GD51 (23 bits away from this cluster)

Group of orthologs #1500. Best score 129 bits
Score difference with first non-orthologous sequence - C.immitis:129 P.ramorum:129

J3KDL5              	100.00%		H3GM03              	100.00%
Bootstrap support for J3KDL5 as seed ortholog is 100%.
Bootstrap support for H3GM03 as seed ortholog is 100%.

Group of orthologs #1501. Best score 129 bits
Score difference with first non-orthologous sequence - C.immitis:129 P.ramorum:30

J0HFA0              	100.00%		H3H2Q1              	100.00%
Bootstrap support for J0HFA0 as seed ortholog is 100%.
Bootstrap support for H3H2Q1 as seed ortholog is 88%.

Group of orthologs #1502. Best score 129 bits
Score difference with first non-orthologous sequence - C.immitis:129 P.ramorum:129

J3KM75              	100.00%		H3GGH4              	100.00%
Bootstrap support for J3KM75 as seed ortholog is 100%.
Bootstrap support for H3GGH4 as seed ortholog is 100%.

Group of orthologs #1503. Best score 129 bits
Score difference with first non-orthologous sequence - C.immitis:129 P.ramorum:129

J3KIP6              	100.00%		H3GPM7              	100.00%
Bootstrap support for J3KIP6 as seed ortholog is 100%.
Bootstrap support for H3GPM7 as seed ortholog is 100%.

Group of orthologs #1504. Best score 129 bits
Score difference with first non-orthologous sequence - C.immitis:129 P.ramorum:81

J3KG76              	100.00%		H3GSK1              	100.00%
Bootstrap support for J3KG76 as seed ortholog is 100%.
Bootstrap support for H3GSK1 as seed ortholog is 86%.

Group of orthologs #1505. Best score 129 bits
Score difference with first non-orthologous sequence - C.immitis:129 P.ramorum:129

I9XKF4              	100.00%		H3HBG6              	100.00%
Bootstrap support for I9XKF4 as seed ortholog is 100%.
Bootstrap support for H3HBG6 as seed ortholog is 100%.

Group of orthologs #1506. Best score 129 bits
Score difference with first non-orthologous sequence - C.immitis:69 P.ramorum:31

J3KC79              	100.00%		H3GYP8              	100.00%
Bootstrap support for J3KC79 as seed ortholog is 94%.
Bootstrap support for H3GYP8 as seed ortholog is 81%.

Group of orthologs #1507. Best score 128 bits
Score difference with first non-orthologous sequence - C.immitis:128 P.ramorum:75

J3K546              	100.00%		H3GDA4              	100.00%
Bootstrap support for J3K546 as seed ortholog is 100%.
Bootstrap support for H3GDA4 as seed ortholog is 99%.

Group of orthologs #1508. Best score 128 bits
Score difference with first non-orthologous sequence - C.immitis:128 P.ramorum:32

J3KDA5              	100.00%		H3GBX3              	100.00%
Bootstrap support for J3KDA5 as seed ortholog is 100%.
Bootstrap support for H3GBX3 as seed ortholog is 90%.

Group of orthologs #1509. Best score 128 bits
Score difference with first non-orthologous sequence - C.immitis:128 P.ramorum:128

J3KLZ5              	100.00%		H3G6A1              	100.00%
Bootstrap support for J3KLZ5 as seed ortholog is 100%.
Bootstrap support for H3G6A1 as seed ortholog is 100%.

Group of orthologs #1510. Best score 128 bits
Score difference with first non-orthologous sequence - C.immitis:128 P.ramorum:128

J3K219              	100.00%		H3GZT3              	100.00%
Bootstrap support for J3K219 as seed ortholog is 100%.
Bootstrap support for H3GZT3 as seed ortholog is 100%.

Group of orthologs #1511. Best score 128 bits
Score difference with first non-orthologous sequence - C.immitis:128 P.ramorum:128

J3KHW7              	100.00%		H3GKM6              	100.00%
Bootstrap support for J3KHW7 as seed ortholog is 100%.
Bootstrap support for H3GKM6 as seed ortholog is 100%.

Group of orthologs #1512. Best score 128 bits
Score difference with first non-orthologous sequence - C.immitis:128 P.ramorum:128

J3K3I3              	100.00%		H3H1K0              	100.00%
Bootstrap support for J3K3I3 as seed ortholog is 100%.
Bootstrap support for H3H1K0 as seed ortholog is 100%.

Group of orthologs #1513. Best score 128 bits
Score difference with first non-orthologous sequence - C.immitis:128 P.ramorum:128

J3KAT8              	100.00%		H3H1C0              	100.00%
Bootstrap support for J3KAT8 as seed ortholog is 100%.
Bootstrap support for H3H1C0 as seed ortholog is 100%.

Group of orthologs #1514. Best score 128 bits
Score difference with first non-orthologous sequence - C.immitis:128 P.ramorum:69

J3KIY0              	100.00%		H3GVT6              	100.00%
Bootstrap support for J3KIY0 as seed ortholog is 100%.
Bootstrap support for H3GVT6 as seed ortholog is 93%.

Group of orthologs #1515. Best score 128 bits
Score difference with first non-orthologous sequence - C.immitis:128 P.ramorum:128

Q1E6Q0              	100.00%		H3GS08              	100.00%
Bootstrap support for Q1E6Q0 as seed ortholog is 100%.
Bootstrap support for H3GS08 as seed ortholog is 100%.

Group of orthologs #1516. Best score 128 bits
Score difference with first non-orthologous sequence - C.immitis:59 P.ramorum:128

J3KIE6              	100.00%		H3GY55              	100.00%
Bootstrap support for J3KIE6 as seed ortholog is 99%.
Bootstrap support for H3GY55 as seed ortholog is 100%.

Group of orthologs #1517. Best score 127 bits
Score difference with first non-orthologous sequence - C.immitis:22 P.ramorum:23

J3K6V1              	100.00%		H3H171              	100.00%
                    	       		H3H6P7              	99.39%
                    	       		H3H8B9              	6.58%
Bootstrap support for J3K6V1 as seed ortholog is 68%.
Alternative seed ortholog is J0HDE9 (22 bits away from this cluster)
Bootstrap support for H3H171 as seed ortholog is 79%.

Group of orthologs #1518. Best score 127 bits
Score difference with first non-orthologous sequence - C.immitis:127 P.ramorum:127

J3KHJ7              	100.00%		H3GLK4              	100.00%
                    	       		H3GLK2              	45.25%
Bootstrap support for J3KHJ7 as seed ortholog is 100%.
Bootstrap support for H3GLK4 as seed ortholog is 100%.

Group of orthologs #1519. Best score 127 bits
Score difference with first non-orthologous sequence - C.immitis:127 P.ramorum:127

J3KH43              	100.00%		H3G5Z9              	100.00%
Bootstrap support for J3KH43 as seed ortholog is 100%.
Bootstrap support for H3G5Z9 as seed ortholog is 100%.

Group of orthologs #1520. Best score 127 bits
Score difference with first non-orthologous sequence - C.immitis:127 P.ramorum:127

J3KDL4              	100.00%		H3GI13              	100.00%
Bootstrap support for J3KDL4 as seed ortholog is 100%.
Bootstrap support for H3GI13 as seed ortholog is 100%.

Group of orthologs #1521. Best score 127 bits
Score difference with first non-orthologous sequence - C.immitis:127 P.ramorum:127

J3K0I5              	100.00%		H3GXW9              	100.00%
Bootstrap support for J3K0I5 as seed ortholog is 100%.
Bootstrap support for H3GXW9 as seed ortholog is 100%.

Group of orthologs #1522. Best score 127 bits
Score difference with first non-orthologous sequence - C.immitis:127 P.ramorum:127

J3KBV1              	100.00%		H3GNV2              	100.00%
Bootstrap support for J3KBV1 as seed ortholog is 100%.
Bootstrap support for H3GNV2 as seed ortholog is 100%.

Group of orthologs #1523. Best score 126 bits
Score difference with first non-orthologous sequence - C.immitis:55 P.ramorum:61

J3KA22              	100.00%		H3GAU8              	100.00%
                    	       		H3H400              	27.68%
                    	       		H3GBC4              	19.28%
                    	       		H3GC44              	18.66%
                    	       		H3GWQ8              	18.51%
Bootstrap support for J3KA22 as seed ortholog is 93%.
Bootstrap support for H3GAU8 as seed ortholog is 96%.

Group of orthologs #1524. Best score 126 bits
Score difference with first non-orthologous sequence - C.immitis:40 P.ramorum:75

J3K062              	100.00%		H3GBA3              	100.00%
                    	       		H3GHJ3              	70.20%
                    	       		H3G8M0              	31.78%
                    	       		H3G9G3              	19.57%
Bootstrap support for J3K062 as seed ortholog is 83%.
Bootstrap support for H3GBA3 as seed ortholog is 96%.

Group of orthologs #1525. Best score 126 bits
Score difference with first non-orthologous sequence - C.immitis:126 P.ramorum:126

I9NM81              	100.00%		H3G7P4              	100.00%
Bootstrap support for I9NM81 as seed ortholog is 100%.
Bootstrap support for H3G7P4 as seed ortholog is 100%.

Group of orthologs #1526. Best score 126 bits
Score difference with first non-orthologous sequence - C.immitis:126 P.ramorum:126

J3KDL9              	100.00%		H3G6F4              	100.00%
Bootstrap support for J3KDL9 as seed ortholog is 100%.
Bootstrap support for H3G6F4 as seed ortholog is 100%.

Group of orthologs #1527. Best score 126 bits
Score difference with first non-orthologous sequence - C.immitis:126 P.ramorum:126

J3K9Z9              	100.00%		H3GM15              	100.00%
Bootstrap support for J3K9Z9 as seed ortholog is 100%.
Bootstrap support for H3GM15 as seed ortholog is 100%.

Group of orthologs #1528. Best score 126 bits
Score difference with first non-orthologous sequence - C.immitis:126 P.ramorum:126

Q1DP17              	100.00%		H3GF06              	100.00%
Bootstrap support for Q1DP17 as seed ortholog is 100%.
Bootstrap support for H3GF06 as seed ortholog is 100%.

Group of orthologs #1529. Best score 126 bits
Score difference with first non-orthologous sequence - C.immitis:126 P.ramorum:20

J3KHZ8              	100.00%		H3GJS2              	100.00%
Bootstrap support for J3KHZ8 as seed ortholog is 100%.
Bootstrap support for H3GJS2 as seed ortholog is 77%.

Group of orthologs #1530. Best score 126 bits
Score difference with first non-orthologous sequence - C.immitis:126 P.ramorum:126

J3KB22              	100.00%		H3H037              	100.00%
Bootstrap support for J3KB22 as seed ortholog is 100%.
Bootstrap support for H3H037 as seed ortholog is 100%.

Group of orthologs #1531. Best score 126 bits
Score difference with first non-orthologous sequence - C.immitis:126 P.ramorum:126

J3K8X3              	100.00%		H3H5Y1              	100.00%
Bootstrap support for J3K8X3 as seed ortholog is 100%.
Bootstrap support for H3H5Y1 as seed ortholog is 100%.

Group of orthologs #1532. Best score 125 bits
Score difference with first non-orthologous sequence - C.immitis:125 P.ramorum:125

J3K9A9              	100.00%		H3G7A1              	100.00%
Bootstrap support for J3K9A9 as seed ortholog is 100%.
Bootstrap support for H3G7A1 as seed ortholog is 100%.

Group of orthologs #1533. Best score 125 bits
Score difference with first non-orthologous sequence - C.immitis:125 P.ramorum:53

J3KCM2              	100.00%		H3GKQ4              	100.00%
Bootstrap support for J3KCM2 as seed ortholog is 100%.
Bootstrap support for H3GKQ4 as seed ortholog is 71%.
Alternative seed ortholog is H3GHD8 (53 bits away from this cluster)

Group of orthologs #1534. Best score 125 bits
Score difference with first non-orthologous sequence - C.immitis:125 P.ramorum:125

J3KC92              	100.00%		H3GLU2              	100.00%
Bootstrap support for J3KC92 as seed ortholog is 100%.
Bootstrap support for H3GLU2 as seed ortholog is 100%.

Group of orthologs #1535. Best score 125 bits
Score difference with first non-orthologous sequence - C.immitis:9 P.ramorum:39

J0HI55              	100.00%		H3H0J3              	100.00%
Bootstrap support for J0HI55 as seed ortholog is 55%.
Alternative seed ortholog is J3K9D9 (9 bits away from this cluster)
Bootstrap support for H3H0J3 as seed ortholog is 84%.

Group of orthologs #1536. Best score 124 bits
Score difference with first non-orthologous sequence - C.immitis:15 P.ramorum:124

J0HET7              	100.00%		H3GIF5              	100.00%
                    	       		H3GCD9              	10.23%
                    	       		H3GSM0              	6.55%
                    	       		H3GD78              	6.14%
Bootstrap support for J0HET7 as seed ortholog is 67%.
Alternative seed ortholog is J3KAQ9 (15 bits away from this cluster)
Bootstrap support for H3GIF5 as seed ortholog is 100%.

Group of orthologs #1537. Best score 124 bits
Score difference with first non-orthologous sequence - C.immitis:15 P.ramorum:124

J3K2H5              	100.00%		H3GYB0              	100.00%
J0HEY7              	5.72%		H3H6X3              	38.35%
J3K9N0              	5.12%		
Bootstrap support for J3K2H5 as seed ortholog is 68%.
Alternative seed ortholog is J3K2E2 (15 bits away from this cluster)
Bootstrap support for H3GYB0 as seed ortholog is 100%.

Group of orthologs #1538. Best score 124 bits
Score difference with first non-orthologous sequence - C.immitis:124 P.ramorum:45

J3K420              	100.00%		H3GHZ1              	100.00%
                    	       		H3GCV3              	57.56%
Bootstrap support for J3K420 as seed ortholog is 100%.
Bootstrap support for H3GHZ1 as seed ortholog is 90%.

Group of orthologs #1539. Best score 124 bits
Score difference with first non-orthologous sequence - C.immitis:124 P.ramorum:124

J3KIC2              	100.00%		H3GAL5              	100.00%
Bootstrap support for J3KIC2 as seed ortholog is 100%.
Bootstrap support for H3GAL5 as seed ortholog is 100%.

Group of orthologs #1540. Best score 124 bits
Score difference with first non-orthologous sequence - C.immitis:124 P.ramorum:124

J3K1Y0              	100.00%		H3GVW3              	100.00%
Bootstrap support for J3K1Y0 as seed ortholog is 100%.
Bootstrap support for H3GVW3 as seed ortholog is 100%.

Group of orthologs #1541. Best score 124 bits
Score difference with first non-orthologous sequence - C.immitis:124 P.ramorum:124

J3KDF3              	100.00%		H3GW51              	100.00%
Bootstrap support for J3KDF3 as seed ortholog is 100%.
Bootstrap support for H3GW51 as seed ortholog is 100%.

Group of orthologs #1542. Best score 123 bits
Score difference with first non-orthologous sequence - C.immitis:11 P.ramorum:123

J3K2D5              	100.00%		H3G8T2              	100.00%
J3K4P5              	100.00%		H3G876              	100.00%
J3K360              	14.58%		H3GAB3              	51.67%
                    	       		H3GZ94              	47.96%
                    	       		H3GZ74              	46.48%
                    	       		H3GZ96              	38.70%
Bootstrap support for J3K2D5 as seed ortholog is 64%.
Alternative seed ortholog is J3KAW6 (11 bits away from this cluster)
Bootstrap support for J3K4P5 as seed ortholog is 44%.
Alternative seed ortholog is J3KAW6 (11 bits away from this cluster)
Bootstrap support for H3G8T2 as seed ortholog is 100%.
Bootstrap support for H3G876 as seed ortholog is 100%.

Group of orthologs #1543. Best score 123 bits
Score difference with first non-orthologous sequence - C.immitis:123 P.ramorum:123

J3K7X0              	100.00%		H3GU99              	100.00%
                    	       		H3GU97              	34.57%
                    	       		H3GU98              	20.74%
                    	       		H3GUH1              	18.62%
Bootstrap support for J3K7X0 as seed ortholog is 100%.
Bootstrap support for H3GU99 as seed ortholog is 100%.

Group of orthologs #1544. Best score 123 bits
Score difference with first non-orthologous sequence - C.immitis:48 P.ramorum:123

J3KFD8              	100.00%		H3GSZ2              	100.00%
                    	       		H3G9G2              	55.71%
                    	       		H3H8Q4              	49.74%
Bootstrap support for J3KFD8 as seed ortholog is 87%.
Bootstrap support for H3GSZ2 as seed ortholog is 100%.

Group of orthologs #1545. Best score 123 bits
Score difference with first non-orthologous sequence - C.immitis:123 P.ramorum:123

J3KH51              	100.00%		H3GBU5              	100.00%
Bootstrap support for J3KH51 as seed ortholog is 100%.
Bootstrap support for H3GBU5 as seed ortholog is 100%.

Group of orthologs #1546. Best score 123 bits
Score difference with first non-orthologous sequence - C.immitis:123 P.ramorum:123

J3KB64              	100.00%		H3GM43              	100.00%
Bootstrap support for J3KB64 as seed ortholog is 100%.
Bootstrap support for H3GM43 as seed ortholog is 100%.

Group of orthologs #1547. Best score 123 bits
Score difference with first non-orthologous sequence - C.immitis:39 P.ramorum:123

J3K2A2              	100.00%		H3HAR5              	100.00%
Bootstrap support for J3K2A2 as seed ortholog is 84%.
Bootstrap support for H3HAR5 as seed ortholog is 100%.

Group of orthologs #1548. Best score 122 bits
Score difference with first non-orthologous sequence - C.immitis:122 P.ramorum:122

J3K493              	100.00%		H3GTJ4              	100.00%
Bootstrap support for J3K493 as seed ortholog is 100%.
Bootstrap support for H3GTJ4 as seed ortholog is 100%.

Group of orthologs #1549. Best score 122 bits
Score difference with first non-orthologous sequence - C.immitis:122 P.ramorum:122

J3KL15              	100.00%		H3GTH1              	100.00%
Bootstrap support for J3KL15 as seed ortholog is 100%.
Bootstrap support for H3GTH1 as seed ortholog is 100%.

Group of orthologs #1550. Best score 122 bits
Score difference with first non-orthologous sequence - C.immitis:36 P.ramorum:57

J3KI38              	100.00%		H3HDG7              	100.00%
Bootstrap support for J3KI38 as seed ortholog is 86%.
Bootstrap support for H3HDG7 as seed ortholog is 96%.

Group of orthologs #1551. Best score 121 bits
Score difference with first non-orthologous sequence - C.immitis:121 P.ramorum:121

J3KLP4              	100.00%		H3GK11              	100.00%
                    	       		H3HB48              	16.99%
Bootstrap support for J3KLP4 as seed ortholog is 100%.
Bootstrap support for H3GK11 as seed ortholog is 100%.

Group of orthologs #1552. Best score 121 bits
Score difference with first non-orthologous sequence - C.immitis:121 P.ramorum:121

J3KBJ0              	100.00%		H3H5P8              	100.00%
                    	       		H3H0H4              	75.83%
Bootstrap support for J3KBJ0 as seed ortholog is 100%.
Bootstrap support for H3H5P8 as seed ortholog is 100%.

Group of orthologs #1553. Best score 121 bits
Score difference with first non-orthologous sequence - C.immitis:121 P.ramorum:121

J3KKT1              	100.00%		H3GYW6              	100.00%
                    	       		H3GYV5              	35.88%
Bootstrap support for J3KKT1 as seed ortholog is 100%.
Bootstrap support for H3GYW6 as seed ortholog is 100%.

Group of orthologs #1554. Best score 121 bits
Score difference with first non-orthologous sequence - C.immitis:121 P.ramorum:121

J3K4G5              	100.00%		H3G9D5              	100.00%
Bootstrap support for J3K4G5 as seed ortholog is 100%.
Bootstrap support for H3G9D5 as seed ortholog is 100%.

Group of orthologs #1555. Best score 121 bits
Score difference with first non-orthologous sequence - C.immitis:121 P.ramorum:121

J3KCB6              	100.00%		H3G7E0              	100.00%
Bootstrap support for J3KCB6 as seed ortholog is 100%.
Bootstrap support for H3G7E0 as seed ortholog is 100%.

Group of orthologs #1556. Best score 121 bits
Score difference with first non-orthologous sequence - C.immitis:121 P.ramorum:121

J3KFM7              	100.00%		H3GA96              	100.00%
Bootstrap support for J3KFM7 as seed ortholog is 100%.
Bootstrap support for H3GA96 as seed ortholog is 100%.

Group of orthologs #1557. Best score 121 bits
Score difference with first non-orthologous sequence - C.immitis:29 P.ramorum:121

J3K2B3              	100.00%		H3GPK2              	100.00%
Bootstrap support for J3K2B3 as seed ortholog is 62%.
Alternative seed ortholog is I9NMQ7 (29 bits away from this cluster)
Bootstrap support for H3GPK2 as seed ortholog is 100%.

Group of orthologs #1558. Best score 121 bits
Score difference with first non-orthologous sequence - C.immitis:121 P.ramorum:121

J3K2D6              	100.00%		H3GUX6              	100.00%
Bootstrap support for J3K2D6 as seed ortholog is 100%.
Bootstrap support for H3GUX6 as seed ortholog is 100%.

Group of orthologs #1559. Best score 121 bits
Score difference with first non-orthologous sequence - C.immitis:121 P.ramorum:121

J3K8C8              	100.00%		H3GQZ9              	100.00%
Bootstrap support for J3K8C8 as seed ortholog is 100%.
Bootstrap support for H3GQZ9 as seed ortholog is 100%.

Group of orthologs #1560. Best score 121 bits
Score difference with first non-orthologous sequence - C.immitis:121 P.ramorum:121

J3KEB4              	100.00%		H3GMC3              	100.00%
Bootstrap support for J3KEB4 as seed ortholog is 100%.
Bootstrap support for H3GMC3 as seed ortholog is 100%.

Group of orthologs #1561. Best score 121 bits
Score difference with first non-orthologous sequence - C.immitis:121 P.ramorum:121

J3K9W3              	100.00%		H3GSH6              	100.00%
Bootstrap support for J3K9W3 as seed ortholog is 100%.
Bootstrap support for H3GSH6 as seed ortholog is 100%.

Group of orthologs #1562. Best score 121 bits
Score difference with first non-orthologous sequence - C.immitis:121 P.ramorum:121

J3KA35              	100.00%		H3H2R3              	100.00%
Bootstrap support for J3KA35 as seed ortholog is 100%.
Bootstrap support for H3H2R3 as seed ortholog is 100%.

Group of orthologs #1563. Best score 120 bits
Score difference with first non-orthologous sequence - C.immitis:120 P.ramorum:120

J3K7N3              	100.00%		H3GGB7              	100.00%
                    	       		H3GGB6              	95.08%
                    	       		H3GGB2              	67.69%
                    	       		H3GGB5              	67.02%
                    	       		H3GGC7              	65.29%
Bootstrap support for J3K7N3 as seed ortholog is 100%.
Bootstrap support for H3GGB7 as seed ortholog is 100%.

Group of orthologs #1564. Best score 120 bits
Score difference with first non-orthologous sequence - C.immitis:9 P.ramorum:39

J3KGH0              	100.00%		H3G719              	100.00%
Bootstrap support for J3KGH0 as seed ortholog is 64%.
Alternative seed ortholog is J3KH69 (9 bits away from this cluster)
Bootstrap support for H3G719 as seed ortholog is 95%.

Group of orthologs #1565. Best score 120 bits
Score difference with first non-orthologous sequence - C.immitis:120 P.ramorum:120

J3KA34              	100.00%		H3GU82              	100.00%
Bootstrap support for J3KA34 as seed ortholog is 100%.
Bootstrap support for H3GU82 as seed ortholog is 100%.

Group of orthologs #1566. Best score 119 bits
Score difference with first non-orthologous sequence - C.immitis:119 P.ramorum:119

J3K056              	100.00%		H3GY04              	100.00%
                    	       		H3HAX0              	100.00%
                    	       		H3GG51              	95.74%
                    	       		H3GCF2              	84.96%
                    	       		H3GCF3              	48.09%
                    	       		H3GCF8              	41.74%
Bootstrap support for J3K056 as seed ortholog is 100%.
Bootstrap support for H3GY04 as seed ortholog is 100%.
Bootstrap support for H3HAX0 as seed ortholog is 100%.

Group of orthologs #1567. Best score 119 bits
Score difference with first non-orthologous sequence - C.immitis:119 P.ramorum:119

J3K8W8              	100.00%		H3GHR0              	100.00%
Bootstrap support for J3K8W8 as seed ortholog is 100%.
Bootstrap support for H3GHR0 as seed ortholog is 100%.

Group of orthologs #1568. Best score 119 bits
Score difference with first non-orthologous sequence - C.immitis:119 P.ramorum:119

J3KG98              	100.00%		H3GRU5              	100.00%
Bootstrap support for J3KG98 as seed ortholog is 100%.
Bootstrap support for H3GRU5 as seed ortholog is 100%.

Group of orthologs #1569. Best score 119 bits
Score difference with first non-orthologous sequence - C.immitis:119 P.ramorum:119

I9NQ72              	100.00%		H3HE09              	100.00%
Bootstrap support for I9NQ72 as seed ortholog is 100%.
Bootstrap support for H3HE09 as seed ortholog is 100%.

Group of orthologs #1570. Best score 119 bits
Score difference with first non-orthologous sequence - C.immitis:119 P.ramorum:119

J3K7D3              	100.00%		H3HCV1              	100.00%
Bootstrap support for J3K7D3 as seed ortholog is 100%.
Bootstrap support for H3HCV1 as seed ortholog is 100%.

Group of orthologs #1571. Best score 118 bits
Score difference with first non-orthologous sequence - C.immitis:39 P.ramorum:118

J3K7A4              	100.00%		H3GF49              	100.00%
                    	       		H3GF53              	36.88%
                    	       		H3GF48              	35.85%
                    	       		H3GF52              	34.73%
                    	       		H3GF98              	33.05%
                    	       		H3GF50              	31.28%
Bootstrap support for J3K7A4 as seed ortholog is 73%.
Alternative seed ortholog is J3KCF1 (39 bits away from this cluster)
Bootstrap support for H3GF49 as seed ortholog is 100%.

Group of orthologs #1572. Best score 118 bits
Score difference with first non-orthologous sequence - C.immitis:118 P.ramorum:30

J3KF64              	100.00%		H3H0X6              	100.00%
                    	       		H3HE22              	93.33%
Bootstrap support for J3KF64 as seed ortholog is 100%.
Bootstrap support for H3H0X6 as seed ortholog is 70%.
Alternative seed ortholog is H3GC77 (30 bits away from this cluster)

Group of orthologs #1573. Best score 118 bits
Score difference with first non-orthologous sequence - C.immitis:69 P.ramorum:118

I9NP63              	100.00%		H3GGW6              	100.00%
Bootstrap support for I9NP63 as seed ortholog is 98%.
Bootstrap support for H3GGW6 as seed ortholog is 100%.

Group of orthologs #1574. Best score 118 bits
Score difference with first non-orthologous sequence - C.immitis:118 P.ramorum:118

J3K1Q3              	100.00%		H3GIE0              	100.00%
Bootstrap support for J3K1Q3 as seed ortholog is 100%.
Bootstrap support for H3GIE0 as seed ortholog is 100%.

Group of orthologs #1575. Best score 118 bits
Score difference with first non-orthologous sequence - C.immitis:118 P.ramorum:118

I9NKR1              	100.00%		H3GRN5              	100.00%
Bootstrap support for I9NKR1 as seed ortholog is 100%.
Bootstrap support for H3GRN5 as seed ortholog is 100%.

Group of orthologs #1576. Best score 118 bits
Score difference with first non-orthologous sequence - C.immitis:118 P.ramorum:28

J3K8U5              	100.00%		H3GJY2              	100.00%
Bootstrap support for J3K8U5 as seed ortholog is 100%.
Bootstrap support for H3GJY2 as seed ortholog is 82%.

Group of orthologs #1577. Best score 118 bits
Score difference with first non-orthologous sequence - C.immitis:118 P.ramorum:118

J3KJI3              	100.00%		H3GF34              	100.00%
Bootstrap support for J3KJI3 as seed ortholog is 100%.
Bootstrap support for H3GF34 as seed ortholog is 100%.

Group of orthologs #1578. Best score 118 bits
Score difference with first non-orthologous sequence - C.immitis:118 P.ramorum:118

J3K5L8              	100.00%		H3GV42              	100.00%
Bootstrap support for J3K5L8 as seed ortholog is 100%.
Bootstrap support for H3GV42 as seed ortholog is 100%.

Group of orthologs #1579. Best score 118 bits
Score difference with first non-orthologous sequence - C.immitis:118 P.ramorum:118

J3KLJ9              	100.00%		H3GHR7              	100.00%
Bootstrap support for J3KLJ9 as seed ortholog is 100%.
Bootstrap support for H3GHR7 as seed ortholog is 100%.

Group of orthologs #1580. Best score 118 bits
Score difference with first non-orthologous sequence - C.immitis:118 P.ramorum:118

J3KF73              	100.00%		H3GVJ5              	100.00%
Bootstrap support for J3KF73 as seed ortholog is 100%.
Bootstrap support for H3GVJ5 as seed ortholog is 100%.

Group of orthologs #1581. Best score 118 bits
Score difference with first non-orthologous sequence - C.immitis:118 P.ramorum:118

J3KEL6              	100.00%		H3GYT5              	100.00%
Bootstrap support for J3KEL6 as seed ortholog is 100%.
Bootstrap support for H3GYT5 as seed ortholog is 100%.

Group of orthologs #1582. Best score 117 bits
Score difference with first non-orthologous sequence - C.immitis:117 P.ramorum:117

J3K3B7              	100.00%		H3GLF5              	100.00%
J3KIW9              	10.63%		H3GLF4              	70.60%
Bootstrap support for J3K3B7 as seed ortholog is 100%.
Bootstrap support for H3GLF5 as seed ortholog is 100%.

Group of orthologs #1583. Best score 117 bits
Score difference with first non-orthologous sequence - C.immitis:117 P.ramorum:117

J3KJD2              	100.00%		H3GTM0              	100.00%
                    	       		H3GZM6              	83.77%
                    	       		H3GTM1              	70.97%
Bootstrap support for J3KJD2 as seed ortholog is 100%.
Bootstrap support for H3GTM0 as seed ortholog is 100%.

Group of orthologs #1584. Best score 117 bits
Score difference with first non-orthologous sequence - C.immitis:71 P.ramorum:117

J3KB20              	100.00%		H3G8P4              	100.00%
Bootstrap support for J3KB20 as seed ortholog is 99%.
Bootstrap support for H3G8P4 as seed ortholog is 100%.

Group of orthologs #1585. Best score 116 bits
Score difference with first non-orthologous sequence - C.immitis:18 P.ramorum:24

J3KC06              	100.00%		H3HC55              	100.00%
                    	       		H3G7G8              	28.01%
                    	       		H3GZW8              	8.53%
Bootstrap support for J3KC06 as seed ortholog is 74%.
Alternative seed ortholog is J3K8V0 (18 bits away from this cluster)
Bootstrap support for H3HC55 as seed ortholog is 83%.

Group of orthologs #1586. Best score 116 bits
Score difference with first non-orthologous sequence - C.immitis:116 P.ramorum:116

J3K5Q5              	100.00%		H3G5K6              	100.00%
Bootstrap support for J3K5Q5 as seed ortholog is 100%.
Bootstrap support for H3G5K6 as seed ortholog is 100%.

Group of orthologs #1587. Best score 116 bits
Score difference with first non-orthologous sequence - C.immitis:116 P.ramorum:116

J3K092              	100.00%		H3GNM2              	100.00%
Bootstrap support for J3K092 as seed ortholog is 100%.
Bootstrap support for H3GNM2 as seed ortholog is 100%.

Group of orthologs #1588. Best score 116 bits
Score difference with first non-orthologous sequence - C.immitis:116 P.ramorum:116

J3KHS0              	100.00%		H3GS83              	100.00%
Bootstrap support for J3KHS0 as seed ortholog is 100%.
Bootstrap support for H3GS83 as seed ortholog is 100%.

Group of orthologs #1589. Best score 116 bits
Score difference with first non-orthologous sequence - C.immitis:116 P.ramorum:116

J3KM23              	100.00%		H3GQ33              	100.00%
Bootstrap support for J3KM23 as seed ortholog is 100%.
Bootstrap support for H3GQ33 as seed ortholog is 100%.

Group of orthologs #1590. Best score 116 bits
Score difference with first non-orthologous sequence - C.immitis:116 P.ramorum:116

J3KG33              	100.00%		H3H1L9              	100.00%
Bootstrap support for J3KG33 as seed ortholog is 100%.
Bootstrap support for H3H1L9 as seed ortholog is 100%.

Group of orthologs #1591. Best score 115 bits
Score difference with first non-orthologous sequence - C.immitis:115 P.ramorum:115

J3K7U2              	100.00%		H3GTW4              	100.00%
                    	       		H3GC61              	14.14%
Bootstrap support for J3K7U2 as seed ortholog is 100%.
Bootstrap support for H3GTW4 as seed ortholog is 100%.

Group of orthologs #1592. Best score 115 bits
Score difference with first non-orthologous sequence - C.immitis:32 P.ramorum:62

I9NNF2              	100.00%		H3GMU6              	100.00%
Bootstrap support for I9NNF2 as seed ortholog is 98%.
Bootstrap support for H3GMU6 as seed ortholog is 99%.

Group of orthologs #1593. Best score 114 bits
Score difference with first non-orthologous sequence - C.immitis:73 P.ramorum:114

J3K282              	100.00%		H3GMM6              	100.00%
J3K7Y2              	10.19%		H3GMP0              	88.71%
                    	       		H3H4S9              	86.46%
                    	       		H3GHD7              	44.47%
Bootstrap support for J3K282 as seed ortholog is 98%.
Bootstrap support for H3GMM6 as seed ortholog is 100%.

Group of orthologs #1594. Best score 114 bits
Score difference with first non-orthologous sequence - C.immitis:51 P.ramorum:45

J3K5A8              	100.00%		H3G6I8              	100.00%
J3K864              	100.00%		H3GJ12              	100.00%
Bootstrap support for J3K5A8 as seed ortholog is 85%.
Bootstrap support for J3K864 as seed ortholog is 81%.
Bootstrap support for H3G6I8 as seed ortholog is 86%.
Bootstrap support for H3GJ12 as seed ortholog is 82%.

Group of orthologs #1595. Best score 114 bits
Score difference with first non-orthologous sequence - C.immitis:114 P.ramorum:114

J3K6Y3              	100.00%		H3GMS8              	100.00%
                    	       		H3GMT1              	27.99%
                    	       		H3GMT0              	15.42%
Bootstrap support for J3K6Y3 as seed ortholog is 100%.
Bootstrap support for H3GMS8 as seed ortholog is 100%.

Group of orthologs #1596. Best score 114 bits
Score difference with first non-orthologous sequence - C.immitis:114 P.ramorum:114

J3K352              	100.00%		H3GTW3              	100.00%
Bootstrap support for J3K352 as seed ortholog is 100%.
Bootstrap support for H3GTW3 as seed ortholog is 100%.

Group of orthologs #1597. Best score 114 bits
Score difference with first non-orthologous sequence - C.immitis:114 P.ramorum:114

J3KJL5              	100.00%		H3H020              	100.00%
Bootstrap support for J3KJL5 as seed ortholog is 100%.
Bootstrap support for H3H020 as seed ortholog is 100%.

Group of orthologs #1598. Best score 114 bits
Score difference with first non-orthologous sequence - C.immitis:114 P.ramorum:114

J3KHQ3              	100.00%		H3HBR3              	100.00%
Bootstrap support for J3KHQ3 as seed ortholog is 100%.
Bootstrap support for H3HBR3 as seed ortholog is 100%.

Group of orthologs #1599. Best score 113 bits
Score difference with first non-orthologous sequence - C.immitis:113 P.ramorum:24

J3KHR0              	100.00%		H3GA66              	100.00%
                    	       		H3GB57              	98.49%
                    	       		H3H1Q7              	5.21%
Bootstrap support for J3KHR0 as seed ortholog is 100%.
Bootstrap support for H3GA66 as seed ortholog is 69%.
Alternative seed ortholog is H3GCE3 (24 bits away from this cluster)

Group of orthologs #1600. Best score 113 bits
Score difference with first non-orthologous sequence - C.immitis:37 P.ramorum:39

Q1DRJ3              	100.00%		H3GG07              	100.00%
Bootstrap support for Q1DRJ3 as seed ortholog is 81%.
Bootstrap support for H3GG07 as seed ortholog is 82%.

Group of orthologs #1601. Best score 113 bits
Score difference with first non-orthologous sequence - C.immitis:113 P.ramorum:113

J3KJ81              	100.00%		H3GMV3              	100.00%
Bootstrap support for J3KJ81 as seed ortholog is 100%.
Bootstrap support for H3GMV3 as seed ortholog is 100%.

Group of orthologs #1602. Best score 113 bits
Score difference with first non-orthologous sequence - C.immitis:113 P.ramorum:113

J3KLY4              	100.00%		H3GUC2              	100.00%
Bootstrap support for J3KLY4 as seed ortholog is 100%.
Bootstrap support for H3GUC2 as seed ortholog is 100%.

Group of orthologs #1603. Best score 112 bits
Score difference with first non-orthologous sequence - C.immitis:112 P.ramorum:112

J3K5S1              	100.00%		H3G8L4              	100.00%
Bootstrap support for J3K5S1 as seed ortholog is 100%.
Bootstrap support for H3G8L4 as seed ortholog is 100%.

Group of orthologs #1604. Best score 112 bits
Score difference with first non-orthologous sequence - C.immitis:112 P.ramorum:70

J3KDI5              	100.00%		H3G770              	100.00%
Bootstrap support for J3KDI5 as seed ortholog is 100%.
Bootstrap support for H3G770 as seed ortholog is 99%.

Group of orthologs #1605. Best score 112 bits
Score difference with first non-orthologous sequence - C.immitis:112 P.ramorum:112

J3KJT0              	100.00%		A1XDC2              	100.00%
Bootstrap support for J3KJT0 as seed ortholog is 100%.
Bootstrap support for A1XDC2 as seed ortholog is 100%.

Group of orthologs #1606. Best score 112 bits
Score difference with first non-orthologous sequence - C.immitis:112 P.ramorum:112

J3K3I2              	100.00%		H3GLD6              	100.00%
Bootstrap support for J3K3I2 as seed ortholog is 100%.
Bootstrap support for H3GLD6 as seed ortholog is 100%.

Group of orthologs #1607. Best score 112 bits
Score difference with first non-orthologous sequence - C.immitis:112 P.ramorum:112

J3KJX6              	100.00%		H3GCG9              	100.00%
Bootstrap support for J3KJX6 as seed ortholog is 100%.
Bootstrap support for H3GCG9 as seed ortholog is 100%.

Group of orthologs #1608. Best score 112 bits
Score difference with first non-orthologous sequence - C.immitis:112 P.ramorum:112

J3K4K5              	100.00%		H3GXF2              	100.00%
Bootstrap support for J3K4K5 as seed ortholog is 100%.
Bootstrap support for H3GXF2 as seed ortholog is 100%.

Group of orthologs #1609. Best score 111 bits
Score difference with first non-orthologous sequence - C.immitis:45 P.ramorum:17

J3K4N3              	100.00%		H3GZL7              	100.00%
J3KB12              	11.46%		H3GAX3              	97.39%
                    	       		H3GAC5              	96.46%
Bootstrap support for J3K4N3 as seed ortholog is 91%.
Bootstrap support for H3GZL7 as seed ortholog is 66%.
Alternative seed ortholog is H3G929 (17 bits away from this cluster)

Group of orthologs #1610. Best score 111 bits
Score difference with first non-orthologous sequence - C.immitis:111 P.ramorum:111

J3KD95              	100.00%		H3GH12              	100.00%
                    	       		H3GH13              	64.45%
Bootstrap support for J3KD95 as seed ortholog is 100%.
Bootstrap support for H3GH12 as seed ortholog is 100%.

Group of orthologs #1611. Best score 111 bits
Score difference with first non-orthologous sequence - C.immitis:54 P.ramorum:111

J3K688              	100.00%		H3GIG5              	100.00%
Bootstrap support for J3K688 as seed ortholog is 90%.
Bootstrap support for H3GIG5 as seed ortholog is 100%.

Group of orthologs #1612. Best score 111 bits
Score difference with first non-orthologous sequence - C.immitis:27 P.ramorum:111

J3KEH2              	100.00%		H3GV39              	100.00%
Bootstrap support for J3KEH2 as seed ortholog is 45%.
Alternative seed ortholog is J3K8C1 (27 bits away from this cluster)
Bootstrap support for H3GV39 as seed ortholog is 100%.

Group of orthologs #1613. Best score 111 bits
Score difference with first non-orthologous sequence - C.immitis:111 P.ramorum:111

J3KHB2              	100.00%		H3GSW8              	100.00%
Bootstrap support for J3KHB2 as seed ortholog is 100%.
Bootstrap support for H3GSW8 as seed ortholog is 100%.

Group of orthologs #1614. Best score 110 bits
Score difference with first non-orthologous sequence - C.immitis:110 P.ramorum:110

J3K2S2              	100.00%		H3GJL0              	100.00%
                    	       		H3GJL5              	76.64%
                    	       		H3GJE9              	52.45%
                    	       		H3GDL7              	41.48%
                    	       		H3GC13              	14.50%
Bootstrap support for J3K2S2 as seed ortholog is 100%.
Bootstrap support for H3GJL0 as seed ortholog is 100%.

Group of orthologs #1615. Best score 110 bits
Score difference with first non-orthologous sequence - C.immitis:110 P.ramorum:110

J3K3G7              	100.00%		H3G5H3              	100.00%
Bootstrap support for J3K3G7 as seed ortholog is 100%.
Bootstrap support for H3G5H3 as seed ortholog is 100%.

Group of orthologs #1616. Best score 110 bits
Score difference with first non-orthologous sequence - C.immitis:110 P.ramorum:110

J3K751              	100.00%		H3GAA6              	100.00%
Bootstrap support for J3K751 as seed ortholog is 100%.
Bootstrap support for H3GAA6 as seed ortholog is 100%.

Group of orthologs #1617. Best score 109 bits
Score difference with first non-orthologous sequence - C.immitis:109 P.ramorum:109

J0HDM8              	100.00%		H3GUN4              	100.00%
                    	       		H3GUN7              	24.71%
Bootstrap support for J0HDM8 as seed ortholog is 100%.
Bootstrap support for H3GUN4 as seed ortholog is 100%.

Group of orthologs #1618. Best score 109 bits
Score difference with first non-orthologous sequence - C.immitis:109 P.ramorum:109

J3K4I1              	100.00%		H3G8X9              	100.00%
Bootstrap support for J3K4I1 as seed ortholog is 100%.
Bootstrap support for H3G8X9 as seed ortholog is 100%.

Group of orthologs #1619. Best score 109 bits
Score difference with first non-orthologous sequence - C.immitis:11 P.ramorum:109

J3K6D5              	100.00%		H3GBQ0              	100.00%
Bootstrap support for J3K6D5 as seed ortholog is 59%.
Alternative seed ortholog is J3KDB7 (11 bits away from this cluster)
Bootstrap support for H3GBQ0 as seed ortholog is 100%.

Group of orthologs #1620. Best score 109 bits
Score difference with first non-orthologous sequence - C.immitis:45 P.ramorum:109

J3K5I4              	100.00%		H3GE97              	100.00%
Bootstrap support for J3K5I4 as seed ortholog is 91%.
Bootstrap support for H3GE97 as seed ortholog is 100%.

Group of orthologs #1621. Best score 109 bits
Score difference with first non-orthologous sequence - C.immitis:53 P.ramorum:35

J3K364              	100.00%		H3GJB3              	100.00%
Bootstrap support for J3K364 as seed ortholog is 89%.
Bootstrap support for H3GJB3 as seed ortholog is 59%.
Alternative seed ortholog is H3GMC7 (35 bits away from this cluster)

Group of orthologs #1622. Best score 109 bits
Score difference with first non-orthologous sequence - C.immitis:66 P.ramorum:109

J3KJD6              	100.00%		H3G5B7              	100.00%
Bootstrap support for J3KJD6 as seed ortholog is 99%.
Bootstrap support for H3G5B7 as seed ortholog is 100%.

Group of orthologs #1623. Best score 109 bits
Score difference with first non-orthologous sequence - C.immitis:109 P.ramorum:109

J3K9K8              	100.00%		H3GJT1              	100.00%
Bootstrap support for J3K9K8 as seed ortholog is 100%.
Bootstrap support for H3GJT1 as seed ortholog is 100%.

Group of orthologs #1624. Best score 109 bits
Score difference with first non-orthologous sequence - C.immitis:109 P.ramorum:109

J3KHZ0              	100.00%		H3GTK7              	100.00%
Bootstrap support for J3KHZ0 as seed ortholog is 100%.
Bootstrap support for H3GTK7 as seed ortholog is 100%.

Group of orthologs #1625. Best score 109 bits
Score difference with first non-orthologous sequence - C.immitis:109 P.ramorum:109

J3K5P1              	100.00%		H3HB68              	100.00%
Bootstrap support for J3K5P1 as seed ortholog is 100%.
Bootstrap support for H3HB68 as seed ortholog is 100%.

Group of orthologs #1626. Best score 109 bits
Score difference with first non-orthologous sequence - C.immitis:109 P.ramorum:109

J3KC27              	100.00%		H3HBD3              	100.00%
Bootstrap support for J3KC27 as seed ortholog is 100%.
Bootstrap support for H3HBD3 as seed ortholog is 100%.

Group of orthologs #1627. Best score 109 bits
Score difference with first non-orthologous sequence - C.immitis:64 P.ramorum:52

J3K9P8              	100.00%		H3HEG7              	100.00%
Bootstrap support for J3K9P8 as seed ortholog is 98%.
Bootstrap support for H3HEG7 as seed ortholog is 92%.

Group of orthologs #1628. Best score 108 bits
Score difference with first non-orthologous sequence - C.immitis:108 P.ramorum:108

J3K7M5              	100.00%		H3GEL0              	100.00%
                    	       		H3GKJ3              	15.41%
Bootstrap support for J3K7M5 as seed ortholog is 100%.
Bootstrap support for H3GEL0 as seed ortholog is 100%.

Group of orthologs #1629. Best score 108 bits
Score difference with first non-orthologous sequence - C.immitis:108 P.ramorum:36

J3K3M3              	100.00%		H3GBG8              	100.00%
Bootstrap support for J3K3M3 as seed ortholog is 100%.
Bootstrap support for H3GBG8 as seed ortholog is 92%.

Group of orthologs #1630. Best score 108 bits
Score difference with first non-orthologous sequence - C.immitis:108 P.ramorum:108

J3KFZ0              	100.00%		H3H008              	100.00%
Bootstrap support for J3KFZ0 as seed ortholog is 100%.
Bootstrap support for H3H008 as seed ortholog is 100%.

Group of orthologs #1631. Best score 108 bits
Score difference with first non-orthologous sequence - C.immitis:108 P.ramorum:108

J3KHB9              	100.00%		H3GZT7              	100.00%
Bootstrap support for J3KHB9 as seed ortholog is 100%.
Bootstrap support for H3GZT7 as seed ortholog is 100%.

Group of orthologs #1632. Best score 107 bits
Score difference with first non-orthologous sequence - C.immitis:107 P.ramorum:107

J3KGQ3              	100.00%		H3GFN0              	100.00%
J3KGU8              	100.00%		H3GFM7              	100.00%
Bootstrap support for J3KGQ3 as seed ortholog is 100%.
Bootstrap support for J3KGU8 as seed ortholog is 100%.
Bootstrap support for H3GFN0 as seed ortholog is 100%.
Bootstrap support for H3GFM7 as seed ortholog is 100%.

Group of orthologs #1633. Best score 107 bits
Score difference with first non-orthologous sequence - C.immitis:107 P.ramorum:35

J3KH17              	100.00%		H3GL24              	100.00%
Bootstrap support for J3KH17 as seed ortholog is 100%.
Bootstrap support for H3GL24 as seed ortholog is 85%.

Group of orthologs #1634. Best score 107 bits
Score difference with first non-orthologous sequence - C.immitis:107 P.ramorum:107

J3KJC7              	100.00%		H3GUI4              	100.00%
Bootstrap support for J3KJC7 as seed ortholog is 100%.
Bootstrap support for H3GUI4 as seed ortholog is 100%.

Group of orthologs #1635. Best score 107 bits
Score difference with first non-orthologous sequence - C.immitis:107 P.ramorum:107

J3K0L5              	100.00%		H3HD53              	100.00%
Bootstrap support for J3K0L5 as seed ortholog is 100%.
Bootstrap support for H3HD53 as seed ortholog is 100%.

Group of orthologs #1636. Best score 107 bits
Score difference with first non-orthologous sequence - C.immitis:107 P.ramorum:107

J3KE09              	100.00%		H3H0P3              	100.00%
Bootstrap support for J3KE09 as seed ortholog is 100%.
Bootstrap support for H3H0P3 as seed ortholog is 100%.

Group of orthologs #1637. Best score 107 bits
Score difference with first non-orthologous sequence - C.immitis:107 P.ramorum:107

J3K8N8              	100.00%		H3HEE6              	100.00%
Bootstrap support for J3K8N8 as seed ortholog is 100%.
Bootstrap support for H3HEE6 as seed ortholog is 100%.

Group of orthologs #1638. Best score 106 bits
Score difference with first non-orthologous sequence - C.immitis:106 P.ramorum:106

J3K7T2              	100.00%		H3GMK6              	100.00%
J3K4I8              	100.00%		H3HC77              	100.00%
                    	       		H3GDE9              	51.86%
                    	       		H3GML3              	51.51%
                    	       		H3HC80              	51.41%
                    	       		H3GMK5              	51.18%
                    	       		H3GUG0              	49.88%
                    	       		H3H4Y7              	49.65%
                    	       		H3GUF9              	49.61%
Bootstrap support for J3K7T2 as seed ortholog is 100%.
Bootstrap support for J3K4I8 as seed ortholog is 100%.
Bootstrap support for H3GMK6 as seed ortholog is 100%.
Bootstrap support for H3HC77 as seed ortholog is 100%.

Group of orthologs #1639. Best score 106 bits
Score difference with first non-orthologous sequence - C.immitis:106 P.ramorum:106

J3KI78              	100.00%		H3H0U7              	100.00%
                    	       		H3HAE0              	84.65%
Bootstrap support for J3KI78 as seed ortholog is 100%.
Bootstrap support for H3H0U7 as seed ortholog is 100%.

Group of orthologs #1640. Best score 106 bits
Score difference with first non-orthologous sequence - C.immitis:106 P.ramorum:106

J3K0L9              	100.00%		H3G7A3              	100.00%
Bootstrap support for J3K0L9 as seed ortholog is 100%.
Bootstrap support for H3G7A3 as seed ortholog is 100%.

Group of orthologs #1641. Best score 106 bits
Score difference with first non-orthologous sequence - C.immitis:106 P.ramorum:106

J3K0M0              	100.00%		H3GML8              	100.00%
Bootstrap support for J3K0M0 as seed ortholog is 100%.
Bootstrap support for H3GML8 as seed ortholog is 100%.

Group of orthologs #1642. Best score 106 bits
Score difference with first non-orthologous sequence - C.immitis:106 P.ramorum:106

J3KCT4              	100.00%		H3GCZ1              	100.00%
Bootstrap support for J3KCT4 as seed ortholog is 100%.
Bootstrap support for H3GCZ1 as seed ortholog is 100%.

Group of orthologs #1643. Best score 106 bits
Score difference with first non-orthologous sequence - C.immitis:106 P.ramorum:106

J3K8E1              	100.00%		H3GHN9              	100.00%
Bootstrap support for J3K8E1 as seed ortholog is 100%.
Bootstrap support for H3GHN9 as seed ortholog is 100%.

Group of orthologs #1644. Best score 106 bits
Score difference with first non-orthologous sequence - C.immitis:106 P.ramorum:106

J3KKU6              	100.00%		H3GFQ4              	100.00%
Bootstrap support for J3KKU6 as seed ortholog is 100%.
Bootstrap support for H3GFQ4 as seed ortholog is 100%.

Group of orthologs #1645. Best score 106 bits
Score difference with first non-orthologous sequence - C.immitis:106 P.ramorum:106

J3KCS2              	100.00%		H3GR11              	100.00%
Bootstrap support for J3KCS2 as seed ortholog is 100%.
Bootstrap support for H3GR11 as seed ortholog is 100%.

Group of orthologs #1646. Best score 106 bits
Score difference with first non-orthologous sequence - C.immitis:106 P.ramorum:106

I9XLY0              	100.00%		H3HC65              	100.00%
Bootstrap support for I9XLY0 as seed ortholog is 100%.
Bootstrap support for H3HC65 as seed ortholog is 100%.

Group of orthologs #1647. Best score 106 bits
Score difference with first non-orthologous sequence - C.immitis:106 P.ramorum:106

J3K8A3              	100.00%		H3H3B8              	100.00%
Bootstrap support for J3K8A3 as seed ortholog is 100%.
Bootstrap support for H3H3B8 as seed ortholog is 100%.

Group of orthologs #1648. Best score 106 bits
Score difference with first non-orthologous sequence - C.immitis:106 P.ramorum:106

J3KHD0              	100.00%		H3GUQ1              	100.00%
Bootstrap support for J3KHD0 as seed ortholog is 100%.
Bootstrap support for H3GUQ1 as seed ortholog is 100%.

Group of orthologs #1649. Best score 106 bits
Score difference with first non-orthologous sequence - C.immitis:106 P.ramorum:106

J3KBQ5              	100.00%		H3H2Z1              	100.00%
Bootstrap support for J3KBQ5 as seed ortholog is 100%.
Bootstrap support for H3H2Z1 as seed ortholog is 100%.

Group of orthologs #1650. Best score 105 bits
Score difference with first non-orthologous sequence - C.immitis:105 P.ramorum:105

J3KIC4              	100.00%		H3GX89              	100.00%
                    	       		H3GF33              	18.42%
                    	       		H3GME2              	8.68%
Bootstrap support for J3KIC4 as seed ortholog is 100%.
Bootstrap support for H3GX89 as seed ortholog is 100%.

Group of orthologs #1651. Best score 105 bits
Score difference with first non-orthologous sequence - C.immitis:105 P.ramorum:105

J3KGZ8              	100.00%		H3G6D7              	100.00%
Bootstrap support for J3KGZ8 as seed ortholog is 100%.
Bootstrap support for H3G6D7 as seed ortholog is 100%.

Group of orthologs #1652. Best score 105 bits
Score difference with first non-orthologous sequence - C.immitis:105 P.ramorum:105

J3K8K6              	100.00%		H3GHZ7              	100.00%
Bootstrap support for J3K8K6 as seed ortholog is 100%.
Bootstrap support for H3GHZ7 as seed ortholog is 100%.

Group of orthologs #1653. Best score 105 bits
Score difference with first non-orthologous sequence - C.immitis:105 P.ramorum:105

J3K259              	100.00%		H3GV43              	100.00%
Bootstrap support for J3K259 as seed ortholog is 100%.
Bootstrap support for H3GV43 as seed ortholog is 100%.

Group of orthologs #1654. Best score 105 bits
Score difference with first non-orthologous sequence - C.immitis:105 P.ramorum:105

J3K0Y1              	100.00%		H3H2I9              	100.00%
Bootstrap support for J3K0Y1 as seed ortholog is 100%.
Bootstrap support for H3H2I9 as seed ortholog is 100%.

Group of orthologs #1655. Best score 105 bits
Score difference with first non-orthologous sequence - C.immitis:105 P.ramorum:105

J3KGA4              	100.00%		H3GX22              	100.00%
Bootstrap support for J3KGA4 as seed ortholog is 100%.
Bootstrap support for H3GX22 as seed ortholog is 100%.

Group of orthologs #1656. Best score 105 bits
Score difference with first non-orthologous sequence - C.immitis:105 P.ramorum:105

J0HHP4              	100.00%		H3HE77              	100.00%
Bootstrap support for J0HHP4 as seed ortholog is 100%.
Bootstrap support for H3HE77 as seed ortholog is 100%.

Group of orthologs #1657. Best score 105 bits
Score difference with first non-orthologous sequence - C.immitis:105 P.ramorum:105

J3KCW9              	100.00%		H3H4G3              	100.00%
Bootstrap support for J3KCW9 as seed ortholog is 100%.
Bootstrap support for H3H4G3 as seed ortholog is 100%.

Group of orthologs #1658. Best score 105 bits
Score difference with first non-orthologous sequence - C.immitis:105 P.ramorum:105

J3K416              	100.00%		H3HDU6              	100.00%
Bootstrap support for J3K416 as seed ortholog is 100%.
Bootstrap support for H3HDU6 as seed ortholog is 100%.

Group of orthologs #1659. Best score 105 bits
Score difference with first non-orthologous sequence - C.immitis:105 P.ramorum:105

J3KLG8              	100.00%		H3GYW5              	100.00%
Bootstrap support for J3KLG8 as seed ortholog is 100%.
Bootstrap support for H3GYW5 as seed ortholog is 100%.

Group of orthologs #1660. Best score 104 bits
Score difference with first non-orthologous sequence - C.immitis:104 P.ramorum:104

J3KHX8              	100.00%		H3GYE7              	100.00%
                    	       		H3GYF0              	100.00%
                    	       		H3H1J7              	100.00%
                    	       		H3H3B5              	85.10%
                    	       		H3H3B4              	71.32%
                    	       		H3GQJ6              	33.52%
                    	       		H3GQJ5              	30.91%
                    	       		H3GQJ7              	30.35%
                    	       		H3GUH5              	29.80%
Bootstrap support for J3KHX8 as seed ortholog is 100%.
Bootstrap support for H3GYE7 as seed ortholog is 100%.
Bootstrap support for H3GYF0 as seed ortholog is 100%.
Bootstrap support for H3H1J7 as seed ortholog is 100%.

Group of orthologs #1661. Best score 104 bits
Score difference with first non-orthologous sequence - C.immitis:104 P.ramorum:104

J3K0M1              	100.00%		H3G8I1              	100.00%
Bootstrap support for J3K0M1 as seed ortholog is 100%.
Bootstrap support for H3G8I1 as seed ortholog is 100%.

Group of orthologs #1662. Best score 104 bits
Score difference with first non-orthologous sequence - C.immitis:48 P.ramorum:28

J3K1Y1              	100.00%		H3GHE5              	100.00%
Bootstrap support for J3K1Y1 as seed ortholog is 93%.
Bootstrap support for H3GHE5 as seed ortholog is 81%.

Group of orthologs #1663. Best score 104 bits
Score difference with first non-orthologous sequence - C.immitis:104 P.ramorum:104

J3KFH5              	100.00%		H3G9H6              	100.00%
Bootstrap support for J3KFH5 as seed ortholog is 100%.
Bootstrap support for H3G9H6 as seed ortholog is 100%.

Group of orthologs #1664. Best score 104 bits
Score difference with first non-orthologous sequence - C.immitis:104 P.ramorum:104

J3KBC6              	100.00%		H3GFM2              	100.00%
Bootstrap support for J3KBC6 as seed ortholog is 100%.
Bootstrap support for H3GFM2 as seed ortholog is 100%.

Group of orthologs #1665. Best score 104 bits
Score difference with first non-orthologous sequence - C.immitis:104 P.ramorum:104

J3KK91              	100.00%		H3GBW5              	100.00%
Bootstrap support for J3KK91 as seed ortholog is 100%.
Bootstrap support for H3GBW5 as seed ortholog is 100%.

Group of orthologs #1666. Best score 104 bits
Score difference with first non-orthologous sequence - C.immitis:104 P.ramorum:104

J3KH29              	100.00%		H3GGE0              	100.00%
Bootstrap support for J3KH29 as seed ortholog is 100%.
Bootstrap support for H3GGE0 as seed ortholog is 100%.

Group of orthologs #1667. Best score 104 bits
Score difference with first non-orthologous sequence - C.immitis:104 P.ramorum:104

J3K8T2              	100.00%		H3GXK1              	100.00%
Bootstrap support for J3K8T2 as seed ortholog is 100%.
Bootstrap support for H3GXK1 as seed ortholog is 100%.

Group of orthologs #1668. Best score 104 bits
Score difference with first non-orthologous sequence - C.immitis:104 P.ramorum:104

J3KKZ4              	100.00%		H3GQS8              	100.00%
Bootstrap support for J3KKZ4 as seed ortholog is 100%.
Bootstrap support for H3GQS8 as seed ortholog is 100%.

Group of orthologs #1669. Best score 104 bits
Score difference with first non-orthologous sequence - C.immitis:104 P.ramorum:104

J3KBH4              	100.00%		H3H3Z6              	100.00%
Bootstrap support for J3KBH4 as seed ortholog is 100%.
Bootstrap support for H3H3Z6 as seed ortholog is 100%.

Group of orthologs #1670. Best score 103 bits
Score difference with first non-orthologous sequence - C.immitis:103 P.ramorum:16

I9NTC2              	100.00%		H3G8S4              	100.00%
                    	       		H3G9V5              	71.57%
Bootstrap support for I9NTC2 as seed ortholog is 100%.
Bootstrap support for H3G8S4 as seed ortholog is 78%.

Group of orthologs #1671. Best score 103 bits
Score difference with first non-orthologous sequence - C.immitis:103 P.ramorum:103

J3KI87              	100.00%		H3H8P8              	100.00%
                    	       		H3H1G1              	73.89%
Bootstrap support for J3KI87 as seed ortholog is 100%.
Bootstrap support for H3H8P8 as seed ortholog is 100%.

Group of orthologs #1672. Best score 103 bits
Score difference with first non-orthologous sequence - C.immitis:103 P.ramorum:103

J3K8P6              	100.00%		H3G755              	100.00%
Bootstrap support for J3K8P6 as seed ortholog is 100%.
Bootstrap support for H3G755 as seed ortholog is 100%.

Group of orthologs #1673. Best score 103 bits
Score difference with first non-orthologous sequence - C.immitis:103 P.ramorum:103

J3KE57              	100.00%		H3G9L3              	100.00%
Bootstrap support for J3KE57 as seed ortholog is 100%.
Bootstrap support for H3G9L3 as seed ortholog is 100%.

Group of orthologs #1674. Best score 103 bits
Score difference with first non-orthologous sequence - C.immitis:103 P.ramorum:103

J3KGM7              	100.00%		H3GPA7              	100.00%
Bootstrap support for J3KGM7 as seed ortholog is 100%.
Bootstrap support for H3GPA7 as seed ortholog is 100%.

Group of orthologs #1675. Best score 103 bits
Score difference with first non-orthologous sequence - C.immitis:103 P.ramorum:103

J3K467              	100.00%		H3H367              	100.00%
Bootstrap support for J3K467 as seed ortholog is 100%.
Bootstrap support for H3H367 as seed ortholog is 100%.

Group of orthologs #1676. Best score 103 bits
Score difference with first non-orthologous sequence - C.immitis:63 P.ramorum:103

J3K905              	100.00%		H3GYW7              	100.00%
Bootstrap support for J3K905 as seed ortholog is 96%.
Bootstrap support for H3GYW7 as seed ortholog is 100%.

Group of orthologs #1677. Best score 103 bits
Score difference with first non-orthologous sequence - C.immitis:44 P.ramorum:103

J3KIY9              	100.00%		H3GPH7              	100.00%
Bootstrap support for J3KIY9 as seed ortholog is 98%.
Bootstrap support for H3GPH7 as seed ortholog is 100%.

Group of orthologs #1678. Best score 102 bits
Score difference with first non-orthologous sequence - C.immitis:102 P.ramorum:102

J0HGP2              	100.00%		H3G8K2              	100.00%
J3K1H4              	18.21%		H3GD81              	20.82%
J3K611              	5.93%		
Bootstrap support for J0HGP2 as seed ortholog is 100%.
Bootstrap support for H3G8K2 as seed ortholog is 100%.

Group of orthologs #1679. Best score 102 bits
Score difference with first non-orthologous sequence - C.immitis:102 P.ramorum:8

J3K1B6              	100.00%		H3G8A5              	100.00%
                    	       		H3G532              	19.51%
Bootstrap support for J3K1B6 as seed ortholog is 100%.
Bootstrap support for H3G8A5 as seed ortholog is 64%.
Alternative seed ortholog is H3G8Z7 (8 bits away from this cluster)

Group of orthologs #1680. Best score 102 bits
Score difference with first non-orthologous sequence - C.immitis:102 P.ramorum:102

J3K7K5              	100.00%		H3GRW0              	100.00%
                    	       		H3H6B9              	100.00%
Bootstrap support for J3K7K5 as seed ortholog is 100%.
Bootstrap support for H3GRW0 as seed ortholog is 100%.
Bootstrap support for H3H6B9 as seed ortholog is 100%.

Group of orthologs #1681. Best score 102 bits
Score difference with first non-orthologous sequence - C.immitis:102 P.ramorum:102

J3K4P1              	100.00%		H3GWY0              	100.00%
J3KKV3              	6.48%		
Bootstrap support for J3K4P1 as seed ortholog is 100%.
Bootstrap support for H3GWY0 as seed ortholog is 100%.

Group of orthologs #1682. Best score 102 bits
Score difference with first non-orthologous sequence - C.immitis:102 P.ramorum:102

J3KDP6              	100.00%		H3G8X3              	100.00%
Bootstrap support for J3KDP6 as seed ortholog is 100%.
Bootstrap support for H3G8X3 as seed ortholog is 100%.

Group of orthologs #1683. Best score 102 bits
Score difference with first non-orthologous sequence - C.immitis:102 P.ramorum:58

J3KAD3              	100.00%		H3GGZ8              	100.00%
Bootstrap support for J3KAD3 as seed ortholog is 100%.
Bootstrap support for H3GGZ8 as seed ortholog is 92%.

Group of orthologs #1684. Best score 102 bits
Score difference with first non-orthologous sequence - C.immitis:102 P.ramorum:102

J3K0S5              	100.00%		H3GT42              	100.00%
Bootstrap support for J3K0S5 as seed ortholog is 100%.
Bootstrap support for H3GT42 as seed ortholog is 100%.

Group of orthologs #1685. Best score 102 bits
Score difference with first non-orthologous sequence - C.immitis:102 P.ramorum:102

J3K4G6              	100.00%		H3GQR8              	100.00%
Bootstrap support for J3K4G6 as seed ortholog is 100%.
Bootstrap support for H3GQR8 as seed ortholog is 100%.

Group of orthologs #1686. Best score 102 bits
Score difference with first non-orthologous sequence - C.immitis:102 P.ramorum:102

J3KEU0              	100.00%		H3GVE7              	100.00%
Bootstrap support for J3KEU0 as seed ortholog is 100%.
Bootstrap support for H3GVE7 as seed ortholog is 100%.

Group of orthologs #1687. Best score 102 bits
Score difference with first non-orthologous sequence - C.immitis:102 P.ramorum:102

Q1E9F2              	100.00%		H3GN50              	100.00%
Bootstrap support for Q1E9F2 as seed ortholog is 100%.
Bootstrap support for H3GN50 as seed ortholog is 100%.

Group of orthologs #1688. Best score 102 bits
Score difference with first non-orthologous sequence - C.immitis:102 P.ramorum:102

J3KFQ4              	100.00%		H3GXC2              	100.00%
Bootstrap support for J3KFQ4 as seed ortholog is 100%.
Bootstrap support for H3GXC2 as seed ortholog is 100%.

Group of orthologs #1689. Best score 102 bits
Score difference with first non-orthologous sequence - C.immitis:41 P.ramorum:102

J3KL76              	100.00%		H3GSA3              	100.00%
Bootstrap support for J3KL76 as seed ortholog is 73%.
Alternative seed ortholog is J3KDL3 (41 bits away from this cluster)
Bootstrap support for H3GSA3 as seed ortholog is 100%.

Group of orthologs #1690. Best score 102 bits
Score difference with first non-orthologous sequence - C.immitis:13 P.ramorum:102

J3K4L8              	100.00%		H3HAY4              	100.00%
Bootstrap support for J3K4L8 as seed ortholog is 70%.
Alternative seed ortholog is J3K769 (13 bits away from this cluster)
Bootstrap support for H3HAY4 as seed ortholog is 100%.

Group of orthologs #1691. Best score 102 bits
Score difference with first non-orthologous sequence - C.immitis:102 P.ramorum:102

Q1DQB2              	100.00%		H3GZL3              	100.00%
Bootstrap support for Q1DQB2 as seed ortholog is 100%.
Bootstrap support for H3GZL3 as seed ortholog is 100%.

Group of orthologs #1692. Best score 102 bits
Score difference with first non-orthologous sequence - C.immitis:102 P.ramorum:102

J3KD15              	100.00%		H3HDD1              	100.00%
Bootstrap support for J3KD15 as seed ortholog is 100%.
Bootstrap support for H3HDD1 as seed ortholog is 100%.

Group of orthologs #1693. Best score 102 bits
Score difference with first non-orthologous sequence - C.immitis:102 P.ramorum:102

J3KJP4              	100.00%		H3HBV9              	100.00%
Bootstrap support for J3KJP4 as seed ortholog is 100%.
Bootstrap support for H3HBV9 as seed ortholog is 100%.

Group of orthologs #1694. Best score 101 bits
Score difference with first non-orthologous sequence - C.immitis:101 P.ramorum:101

J3KGB3              	100.00%		H3HBA7              	100.00%
J3KD90              	18.40%		H3H0S7              	37.38%
J3KGQ5              	17.80%		
Bootstrap support for J3KGB3 as seed ortholog is 100%.
Bootstrap support for H3HBA7 as seed ortholog is 100%.

Group of orthologs #1695. Best score 101 bits
Score difference with first non-orthologous sequence - C.immitis:101 P.ramorum:101

J3KE06              	100.00%		H3GDF7              	100.00%
                    	       		H3GZW6              	29.62%
Bootstrap support for J3KE06 as seed ortholog is 100%.
Bootstrap support for H3GDF7 as seed ortholog is 100%.

Group of orthologs #1696. Best score 101 bits
Score difference with first non-orthologous sequence - C.immitis:101 P.ramorum:101

J3K439              	100.00%		H3GA26              	100.00%
Bootstrap support for J3K439 as seed ortholog is 100%.
Bootstrap support for H3GA26 as seed ortholog is 100%.

Group of orthologs #1697. Best score 101 bits
Score difference with first non-orthologous sequence - C.immitis:101 P.ramorum:101

I9XM55              	100.00%		H3GKR7              	100.00%
Bootstrap support for I9XM55 as seed ortholog is 100%.
Bootstrap support for H3GKR7 as seed ortholog is 100%.

Group of orthologs #1698. Best score 101 bits
Score difference with first non-orthologous sequence - C.immitis:56 P.ramorum:101

J3KC97              	100.00%		H3G9I1              	100.00%
Bootstrap support for J3KC97 as seed ortholog is 98%.
Bootstrap support for H3G9I1 as seed ortholog is 100%.

Group of orthologs #1699. Best score 101 bits
Score difference with first non-orthologous sequence - C.immitis:101 P.ramorum:101

J3KFY0              	100.00%		H3G6N6              	100.00%
Bootstrap support for J3KFY0 as seed ortholog is 100%.
Bootstrap support for H3G6N6 as seed ortholog is 100%.

Group of orthologs #1700. Best score 101 bits
Score difference with first non-orthologous sequence - C.immitis:101 P.ramorum:101

J3KEQ6              	100.00%		H3GA41              	100.00%
Bootstrap support for J3KEQ6 as seed ortholog is 100%.
Bootstrap support for H3GA41 as seed ortholog is 100%.

Group of orthologs #1701. Best score 101 bits
Score difference with first non-orthologous sequence - C.immitis:101 P.ramorum:101

J3K653              	100.00%		H3GP18              	100.00%
Bootstrap support for J3K653 as seed ortholog is 100%.
Bootstrap support for H3GP18 as seed ortholog is 100%.

Group of orthologs #1702. Best score 101 bits
Score difference with first non-orthologous sequence - C.immitis:101 P.ramorum:101

J3K9V0              	100.00%		H3GL66              	100.00%
Bootstrap support for J3K9V0 as seed ortholog is 100%.
Bootstrap support for H3GL66 as seed ortholog is 100%.

Group of orthologs #1703. Best score 101 bits
Score difference with first non-orthologous sequence - C.immitis:101 P.ramorum:101

J3K2C4              	100.00%		H3GUB6              	100.00%
Bootstrap support for J3K2C4 as seed ortholog is 100%.
Bootstrap support for H3GUB6 as seed ortholog is 100%.

Group of orthologs #1704. Best score 101 bits
Score difference with first non-orthologous sequence - C.immitis:101 P.ramorum:24

J3KLQ3              	100.00%		H3HC29              	100.00%
Bootstrap support for J3KLQ3 as seed ortholog is 100%.
Bootstrap support for H3HC29 as seed ortholog is 69%.
Alternative seed ortholog is H3GSV7 (24 bits away from this cluster)

Group of orthologs #1705. Best score 100 bits
Score difference with first non-orthologous sequence - C.immitis:100 P.ramorum:100

J3KHW2              	100.00%		H3GML0              	100.00%
                    	       		H3GML1              	41.19%
                    	       		H3G4Z4              	21.87%
                    	       		H3GZR3              	10.40%
Bootstrap support for J3KHW2 as seed ortholog is 100%.
Bootstrap support for H3GML0 as seed ortholog is 100%.

Group of orthologs #1706. Best score 100 bits
Score difference with first non-orthologous sequence - C.immitis:100 P.ramorum:100

J3KGF8              	100.00%		H3GRR1              	100.00%
                    	       		H3H8Z6              	15.11%
                    	       		H3H3T7              	10.62%
                    	       		H3GVS3              	8.13%
Bootstrap support for J3KGF8 as seed ortholog is 100%.
Bootstrap support for H3GRR1 as seed ortholog is 100%.

Group of orthologs #1707. Best score 100 bits
Score difference with first non-orthologous sequence - C.immitis:100 P.ramorum:100

J3KFX5              	100.00%		H3GCT8              	100.00%
                    	       		H3GJ38              	100.00%
                    	       		H3GCT9              	41.51%
Bootstrap support for J3KFX5 as seed ortholog is 100%.
Bootstrap support for H3GCT8 as seed ortholog is 100%.
Bootstrap support for H3GJ38 as seed ortholog is 100%.

Group of orthologs #1708. Best score 100 bits
Score difference with first non-orthologous sequence - C.immitis:100 P.ramorum:100

J3KCJ8              	100.00%		H3GGB9              	100.00%
                    	       		H3HD46              	23.97%
Bootstrap support for J3KCJ8 as seed ortholog is 100%.
Bootstrap support for H3GGB9 as seed ortholog is 100%.

Group of orthologs #1709. Best score 100 bits
Score difference with first non-orthologous sequence - C.immitis:100 P.ramorum:100

J3K471              	100.00%		H3G705              	100.00%
Bootstrap support for J3K471 as seed ortholog is 100%.
Bootstrap support for H3G705 as seed ortholog is 100%.

Group of orthologs #1710. Best score 100 bits
Score difference with first non-orthologous sequence - C.immitis:24 P.ramorum:33

I9NMY0              	100.00%		H3GIL4              	100.00%
Bootstrap support for I9NMY0 as seed ortholog is 68%.
Alternative seed ortholog is J3KKS3 (24 bits away from this cluster)
Bootstrap support for H3GIL4 as seed ortholog is 51%.
Alternative seed ortholog is H3GIS4 (33 bits away from this cluster)

Group of orthologs #1711. Best score 100 bits
Score difference with first non-orthologous sequence - C.immitis:100 P.ramorum:100

J3K9X7              	100.00%		H3G733              	100.00%
Bootstrap support for J3K9X7 as seed ortholog is 100%.
Bootstrap support for H3G733 as seed ortholog is 100%.

Group of orthologs #1712. Best score 100 bits
Score difference with first non-orthologous sequence - C.immitis:100 P.ramorum:100

J3KD45              	100.00%		H3GDL3              	100.00%
Bootstrap support for J3KD45 as seed ortholog is 100%.
Bootstrap support for H3GDL3 as seed ortholog is 100%.

Group of orthologs #1713. Best score 100 bits
Score difference with first non-orthologous sequence - C.immitis:100 P.ramorum:100

Q1DNW5              	100.00%		H3GFI2              	100.00%
Bootstrap support for Q1DNW5 as seed ortholog is 100%.
Bootstrap support for H3GFI2 as seed ortholog is 100%.

Group of orthologs #1714. Best score 99 bits
Score difference with first non-orthologous sequence - C.immitis:47 P.ramorum:26

J3K260              	100.00%		H3G542              	100.00%
Bootstrap support for J3K260 as seed ortholog is 99%.
Bootstrap support for H3G542 as seed ortholog is 96%.

Group of orthologs #1715. Best score 99 bits
Score difference with first non-orthologous sequence - C.immitis:99 P.ramorum:99

J3K1T7              	100.00%		H3G8V1              	100.00%
Bootstrap support for J3K1T7 as seed ortholog is 100%.
Bootstrap support for H3G8V1 as seed ortholog is 100%.

Group of orthologs #1716. Best score 99 bits
Score difference with first non-orthologous sequence - C.immitis:99 P.ramorum:99

J3K087              	100.00%		H3GDP2              	100.00%
Bootstrap support for J3K087 as seed ortholog is 100%.
Bootstrap support for H3GDP2 as seed ortholog is 100%.

Group of orthologs #1717. Best score 99 bits
Score difference with first non-orthologous sequence - C.immitis:99 P.ramorum:99

J3KDI4              	100.00%		H3G7F4              	100.00%
Bootstrap support for J3KDI4 as seed ortholog is 100%.
Bootstrap support for H3G7F4 as seed ortholog is 100%.

Group of orthologs #1718. Best score 99 bits
Score difference with first non-orthologous sequence - C.immitis:99 P.ramorum:99

J3K2S3              	100.00%		H3GT45              	100.00%
Bootstrap support for J3K2S3 as seed ortholog is 100%.
Bootstrap support for H3GT45 as seed ortholog is 100%.

Group of orthologs #1719. Best score 99 bits
Score difference with first non-orthologous sequence - C.immitis:37 P.ramorum:99

J3KCW5              	100.00%		H3GLV7              	100.00%
Bootstrap support for J3KCW5 as seed ortholog is 85%.
Bootstrap support for H3GLV7 as seed ortholog is 100%.

Group of orthologs #1720. Best score 99 bits
Score difference with first non-orthologous sequence - C.immitis:99 P.ramorum:99

J3KKI6              	100.00%		H3H248              	100.00%
Bootstrap support for J3KKI6 as seed ortholog is 100%.
Bootstrap support for H3H248 as seed ortholog is 100%.

Group of orthologs #1721. Best score 98 bits
Score difference with first non-orthologous sequence - C.immitis:98 P.ramorum:98

J0HHB5              	100.00%		H3GQG2              	100.00%
I9NM85              	100.00%		H3H1Q8              	100.00%
J3K295              	50.29%		H3G4Y6              	35.55%
J3KAG9              	39.60%		
J3K6T1              	37.28%		
J0HH82              	37.28%		
J3KA61              	35.98%		
J3KK75              	33.96%		
J3KJC4              	33.38%		
J3KCD3              	31.36%		
J3K0S2              	21.53%		
I9XM64              	19.80%		
J3KCY7              	19.36%		
Bootstrap support for J0HHB5 as seed ortholog is 100%.
Bootstrap support for I9NM85 as seed ortholog is 100%.
Bootstrap support for H3GQG2 as seed ortholog is 100%.
Bootstrap support for H3H1Q8 as seed ortholog is 100%.

Group of orthologs #1722. Best score 98 bits
Score difference with first non-orthologous sequence - C.immitis:98 P.ramorum:98

J3KH79              	100.00%		H3G9S0              	100.00%
                    	       		H3H5I1              	100.00%
                    	       		H3GZI5              	97.82%
Bootstrap support for J3KH79 as seed ortholog is 100%.
Bootstrap support for H3G9S0 as seed ortholog is 100%.
Bootstrap support for H3H5I1 as seed ortholog is 100%.

Group of orthologs #1723. Best score 98 bits
Score difference with first non-orthologous sequence - C.immitis:98 P.ramorum:37

J3K5G9              	100.00%		H3G9S2              	100.00%
J3KIW5              	14.14%		
Bootstrap support for J3K5G9 as seed ortholog is 100%.
Bootstrap support for H3G9S2 as seed ortholog is 90%.

Group of orthologs #1724. Best score 98 bits
Score difference with first non-orthologous sequence - C.immitis:98 P.ramorum:98

J3K2S4              	100.00%		H3G937              	100.00%
Bootstrap support for J3K2S4 as seed ortholog is 100%.
Bootstrap support for H3G937 as seed ortholog is 100%.

Group of orthologs #1725. Best score 98 bits
Score difference with first non-orthologous sequence - C.immitis:98 P.ramorum:98

I9NSI6              	100.00%		H3GR69              	100.00%
Bootstrap support for I9NSI6 as seed ortholog is 100%.
Bootstrap support for H3GR69 as seed ortholog is 100%.

Group of orthologs #1726. Best score 98 bits
Score difference with first non-orthologous sequence - C.immitis:98 P.ramorum:98

J3K9C7              	100.00%		H3GGH6              	100.00%
Bootstrap support for J3K9C7 as seed ortholog is 100%.
Bootstrap support for H3GGH6 as seed ortholog is 100%.

Group of orthologs #1727. Best score 98 bits
Score difference with first non-orthologous sequence - C.immitis:98 P.ramorum:98

Q1DRN0              	100.00%		H3G919              	100.00%
Bootstrap support for Q1DRN0 as seed ortholog is 100%.
Bootstrap support for H3G919 as seed ortholog is 100%.

Group of orthologs #1728. Best score 98 bits
Score difference with first non-orthologous sequence - C.immitis:98 P.ramorum:98

J3KJB4              	100.00%		H3GHQ5              	100.00%
Bootstrap support for J3KJB4 as seed ortholog is 100%.
Bootstrap support for H3GHQ5 as seed ortholog is 100%.

Group of orthologs #1729. Best score 98 bits
Score difference with first non-orthologous sequence - C.immitis:98 P.ramorum:98

J3KLZ6              	100.00%		H3GH02              	100.00%
Bootstrap support for J3KLZ6 as seed ortholog is 100%.
Bootstrap support for H3GH02 as seed ortholog is 100%.

Group of orthologs #1730. Best score 98 bits
Score difference with first non-orthologous sequence - C.immitis:98 P.ramorum:98

J3KIL0              	100.00%		H3HB15              	100.00%
Bootstrap support for J3KIL0 as seed ortholog is 100%.
Bootstrap support for H3HB15 as seed ortholog is 100%.

Group of orthologs #1731. Best score 97 bits
Score difference with first non-orthologous sequence - C.immitis:97 P.ramorum:97

J3KA64              	100.00%		H3GYH6              	100.00%
J3KJC6              	59.54%		H3H9Z6              	48.58%
J3KHX3              	10.18%		
Bootstrap support for J3KA64 as seed ortholog is 100%.
Bootstrap support for H3GYH6 as seed ortholog is 100%.

Group of orthologs #1732. Best score 97 bits
Score difference with first non-orthologous sequence - C.immitis:97 P.ramorum:97

J3KE02              	100.00%		H3GZX3              	100.00%
J0HI02              	5.63%		
Bootstrap support for J3KE02 as seed ortholog is 100%.
Bootstrap support for H3GZX3 as seed ortholog is 100%.

Group of orthologs #1733. Best score 97 bits
Score difference with first non-orthologous sequence - C.immitis:97 P.ramorum:53

J3KDL0              	100.00%		H3G549              	100.00%
Bootstrap support for J3KDL0 as seed ortholog is 100%.
Bootstrap support for H3G549 as seed ortholog is 99%.

Group of orthologs #1734. Best score 97 bits
Score difference with first non-orthologous sequence - C.immitis:97 P.ramorum:97

J3KBB4              	100.00%		H3G9P5              	100.00%
Bootstrap support for J3KBB4 as seed ortholog is 100%.
Bootstrap support for H3G9P5 as seed ortholog is 100%.

Group of orthologs #1735. Best score 97 bits
Score difference with first non-orthologous sequence - C.immitis:97 P.ramorum:97

J3KDQ4              	100.00%		H3GIW5              	100.00%
Bootstrap support for J3KDQ4 as seed ortholog is 100%.
Bootstrap support for H3GIW5 as seed ortholog is 100%.

Group of orthologs #1736. Best score 97 bits
Score difference with first non-orthologous sequence - C.immitis:97 P.ramorum:97

J3K8T4              	100.00%		H3GQC9              	100.00%
Bootstrap support for J3K8T4 as seed ortholog is 100%.
Bootstrap support for H3GQC9 as seed ortholog is 100%.

Group of orthologs #1737. Best score 97 bits
Score difference with first non-orthologous sequence - C.immitis:97 P.ramorum:20

J3KHW8              	100.00%		H3GX87              	100.00%
Bootstrap support for J3KHW8 as seed ortholog is 100%.
Bootstrap support for H3GX87 as seed ortholog is 77%.

Group of orthologs #1738. Best score 97 bits
Score difference with first non-orthologous sequence - C.immitis:97 P.ramorum:97

J3K790              	100.00%		H3HBK6              	100.00%
Bootstrap support for J3K790 as seed ortholog is 100%.
Bootstrap support for H3HBK6 as seed ortholog is 100%.

Group of orthologs #1739. Best score 97 bits
Score difference with first non-orthologous sequence - C.immitis:97 P.ramorum:97

J3KHK9              	100.00%		H3HBL2              	100.00%
Bootstrap support for J3KHK9 as seed ortholog is 100%.
Bootstrap support for H3HBL2 as seed ortholog is 100%.

Group of orthologs #1740. Best score 96 bits
Score difference with first non-orthologous sequence - C.immitis:39 P.ramorum:96

I9XJX8              	100.00%		H3GFJ6              	100.00%
                    	       		H3GW64              	100.00%
Bootstrap support for I9XJX8 as seed ortholog is 86%.
Bootstrap support for H3GFJ6 as seed ortholog is 100%.
Bootstrap support for H3GW64 as seed ortholog is 100%.

Group of orthologs #1741. Best score 96 bits
Score difference with first non-orthologous sequence - C.immitis:96 P.ramorum:96

J3KM50              	100.00%		H3GAY5              	100.00%
                    	       		H3H4T8              	100.00%
Bootstrap support for J3KM50 as seed ortholog is 100%.
Bootstrap support for H3GAY5 as seed ortholog is 100%.
Bootstrap support for H3H4T8 as seed ortholog is 100%.

Group of orthologs #1742. Best score 96 bits
Score difference with first non-orthologous sequence - C.immitis:43 P.ramorum:96

J0HES0              	100.00%		H3G9H2              	100.00%
Bootstrap support for J0HES0 as seed ortholog is 88%.
Bootstrap support for H3G9H2 as seed ortholog is 100%.

Group of orthologs #1743. Best score 96 bits
Score difference with first non-orthologous sequence - C.immitis:96 P.ramorum:96

J3K4Q7              	100.00%		H3GBB8              	100.00%
Bootstrap support for J3K4Q7 as seed ortholog is 100%.
Bootstrap support for H3GBB8 as seed ortholog is 100%.

Group of orthologs #1744. Best score 96 bits
Score difference with first non-orthologous sequence - C.immitis:96 P.ramorum:96

J3K0Q9              	100.00%		H3GK10              	100.00%
Bootstrap support for J3K0Q9 as seed ortholog is 100%.
Bootstrap support for H3GK10 as seed ortholog is 100%.

Group of orthologs #1745. Best score 96 bits
Score difference with first non-orthologous sequence - C.immitis:96 P.ramorum:96

J3KGL1              	100.00%		H3G535              	100.00%
Bootstrap support for J3KGL1 as seed ortholog is 100%.
Bootstrap support for H3G535 as seed ortholog is 100%.

Group of orthologs #1746. Best score 96 bits
Score difference with first non-orthologous sequence - C.immitis:96 P.ramorum:96

J3KJH7              	100.00%		H3G7Y0              	100.00%
Bootstrap support for J3KJH7 as seed ortholog is 100%.
Bootstrap support for H3G7Y0 as seed ortholog is 100%.

Group of orthologs #1747. Best score 96 bits
Score difference with first non-orthologous sequence - C.immitis:96 P.ramorum:96

J3K2Y0              	100.00%		H3GS62              	100.00%
Bootstrap support for J3K2Y0 as seed ortholog is 100%.
Bootstrap support for H3GS62 as seed ortholog is 100%.

Group of orthologs #1748. Best score 96 bits
Score difference with first non-orthologous sequence - C.immitis:96 P.ramorum:96

J3KDB4              	100.00%		H3GJY0              	100.00%
Bootstrap support for J3KDB4 as seed ortholog is 100%.
Bootstrap support for H3GJY0 as seed ortholog is 100%.

Group of orthologs #1749. Best score 96 bits
Score difference with first non-orthologous sequence - C.immitis:96 P.ramorum:96

J3KLL2              	100.00%		H3GEF9              	100.00%
Bootstrap support for J3KLL2 as seed ortholog is 100%.
Bootstrap support for H3GEF9 as seed ortholog is 100%.

Group of orthologs #1750. Best score 96 bits
Score difference with first non-orthologous sequence - C.immitis:96 P.ramorum:96

J3KF89              	100.00%		H3GV35              	100.00%
Bootstrap support for J3KF89 as seed ortholog is 100%.
Bootstrap support for H3GV35 as seed ortholog is 100%.

Group of orthologs #1751. Best score 96 bits
Score difference with first non-orthologous sequence - C.immitis:96 P.ramorum:96

J3K346              	100.00%		H3HB50              	100.00%
Bootstrap support for J3K346 as seed ortholog is 100%.
Bootstrap support for H3HB50 as seed ortholog is 100%.

Group of orthologs #1752. Best score 95 bits
Score difference with first non-orthologous sequence - C.immitis:32 P.ramorum:95

J3KI26              	100.00%		H3GXW0              	100.00%
J3K2C0              	24.88%		H3GXV6              	84.60%
J3K7G3              	23.40%		H3GXV8              	74.33%
I9NTJ5              	16.43%		H3GFL3              	57.35%
J0HDT6              	7.06%		H3GQA0              	50.74%
                    	       		H3GDW2              	32.58%
Bootstrap support for J3KI26 as seed ortholog is 64%.
Alternative seed ortholog is J3K549 (32 bits away from this cluster)
Bootstrap support for H3GXW0 as seed ortholog is 100%.

Group of orthologs #1753. Best score 95 bits
Score difference with first non-orthologous sequence - C.immitis:27 P.ramorum:95

J3KBD6              	100.00%		H3GY17              	100.00%
J3KEB6              	23.50%		
I9NRI0              	21.15%		
J3K1Q9              	20.68%		
J3K5X7              	15.04%		
J3K090              	7.99%		
Bootstrap support for J3KBD6 as seed ortholog is 69%.
Alternative seed ortholog is J3KLV4 (27 bits away from this cluster)
Bootstrap support for H3GY17 as seed ortholog is 100%.

Group of orthologs #1754. Best score 95 bits
Score difference with first non-orthologous sequence - C.immitis:32 P.ramorum:95

J0HHD6              	100.00%		H3GE96              	100.00%
                    	       		H3HB55              	100.00%
                    	       		H3GE95              	51.84%
Bootstrap support for J0HHD6 as seed ortholog is 86%.
Bootstrap support for H3GE96 as seed ortholog is 100%.
Bootstrap support for H3HB55 as seed ortholog is 100%.

Group of orthologs #1755. Best score 95 bits
Score difference with first non-orthologous sequence - C.immitis:95 P.ramorum:95

J3K432              	100.00%		H3GX41              	100.00%
                    	       		H3GX40              	57.39%
                    	       		H3GX39              	52.51%
Bootstrap support for J3K432 as seed ortholog is 100%.
Bootstrap support for H3GX41 as seed ortholog is 100%.

Group of orthologs #1756. Best score 95 bits
Score difference with first non-orthologous sequence - C.immitis:1 P.ramorum:95

J3K5Q7              	100.00%		H3GBZ8              	100.00%
Bootstrap support for J3K5Q7 as seed ortholog is 49%.
Alternative seed ortholog is J3K8U2 (1 bits away from this cluster)
Bootstrap support for H3GBZ8 as seed ortholog is 100%.

Group of orthologs #1757. Best score 95 bits
Score difference with first non-orthologous sequence - C.immitis:95 P.ramorum:95

J3KE21              	100.00%		H3G538              	100.00%
Bootstrap support for J3KE21 as seed ortholog is 100%.
Bootstrap support for H3G538 as seed ortholog is 100%.

Group of orthologs #1758. Best score 95 bits
Score difference with first non-orthologous sequence - C.immitis:95 P.ramorum:95

J3K7R4              	100.00%		H3GKS2              	100.00%
Bootstrap support for J3K7R4 as seed ortholog is 100%.
Bootstrap support for H3GKS2 as seed ortholog is 100%.

Group of orthologs #1759. Best score 95 bits
Score difference with first non-orthologous sequence - C.immitis:95 P.ramorum:95

J3KHX9              	100.00%		H3GDP3              	100.00%
Bootstrap support for J3KHX9 as seed ortholog is 100%.
Bootstrap support for H3GDP3 as seed ortholog is 100%.

Group of orthologs #1760. Best score 95 bits
Score difference with first non-orthologous sequence - C.immitis:95 P.ramorum:95

J3KBF4              	100.00%		H3GKL7              	100.00%
Bootstrap support for J3KBF4 as seed ortholog is 100%.
Bootstrap support for H3GKL7 as seed ortholog is 100%.

Group of orthologs #1761. Best score 95 bits
Score difference with first non-orthologous sequence - C.immitis:95 P.ramorum:95

J3KHE2              	100.00%		H3GNV0              	100.00%
Bootstrap support for J3KHE2 as seed ortholog is 100%.
Bootstrap support for H3GNV0 as seed ortholog is 100%.

Group of orthologs #1762. Best score 95 bits
Score difference with first non-orthologous sequence - C.immitis:95 P.ramorum:95

J3KBP2              	100.00%		H3GZE2              	100.00%
Bootstrap support for J3KBP2 as seed ortholog is 100%.
Bootstrap support for H3GZE2 as seed ortholog is 100%.

Group of orthologs #1763. Best score 95 bits
Score difference with first non-orthologous sequence - C.immitis:95 P.ramorum:23

J3K0V8              	100.00%		H3HE01              	100.00%
Bootstrap support for J3K0V8 as seed ortholog is 100%.
Bootstrap support for H3HE01 as seed ortholog is 65%.
Alternative seed ortholog is H3GMP4 (23 bits away from this cluster)

Group of orthologs #1764. Best score 95 bits
Score difference with first non-orthologous sequence - C.immitis:95 P.ramorum:95

J3KMC6              	100.00%		H3GWJ9              	100.00%
Bootstrap support for J3KMC6 as seed ortholog is 100%.
Bootstrap support for H3GWJ9 as seed ortholog is 100%.

Group of orthologs #1765. Best score 95 bits
Score difference with first non-orthologous sequence - C.immitis:95 P.ramorum:95

J3KKG2              	100.00%		H3HBE3              	100.00%
Bootstrap support for J3KKG2 as seed ortholog is 100%.
Bootstrap support for H3HBE3 as seed ortholog is 100%.

Group of orthologs #1766. Best score 94 bits
Score difference with first non-orthologous sequence - C.immitis:94 P.ramorum:94

J0HH74              	100.00%		H3GT63              	100.00%
                    	       		H3GT62              	53.31%
Bootstrap support for J0HH74 as seed ortholog is 100%.
Bootstrap support for H3GT63 as seed ortholog is 100%.

Group of orthologs #1767. Best score 94 bits
Score difference with first non-orthologous sequence - C.immitis:94 P.ramorum:94

J3K6S4              	100.00%		H3G809              	100.00%
Bootstrap support for J3K6S4 as seed ortholog is 100%.
Bootstrap support for H3G809 as seed ortholog is 100%.

Group of orthologs #1768. Best score 94 bits
Score difference with first non-orthologous sequence - C.immitis:23 P.ramorum:94

J0HH97              	100.00%		H3GLR4              	100.00%
Bootstrap support for J0HH97 as seed ortholog is 77%.
Bootstrap support for H3GLR4 as seed ortholog is 100%.

Group of orthologs #1769. Best score 94 bits
Score difference with first non-orthologous sequence - C.immitis:94 P.ramorum:94

J3K9T8              	100.00%		H3GCJ4              	100.00%
Bootstrap support for J3K9T8 as seed ortholog is 100%.
Bootstrap support for H3GCJ4 as seed ortholog is 100%.

Group of orthologs #1770. Best score 94 bits
Score difference with first non-orthologous sequence - C.immitis:5 P.ramorum:94

J3K2J8              	100.00%		H3GQ86              	100.00%
Bootstrap support for J3K2J8 as seed ortholog is 56%.
Alternative seed ortholog is J3KC46 (5 bits away from this cluster)
Bootstrap support for H3GQ86 as seed ortholog is 100%.

Group of orthologs #1771. Best score 94 bits
Score difference with first non-orthologous sequence - C.immitis:94 P.ramorum:94

J3KD65              	100.00%		H3GJ23              	100.00%
Bootstrap support for J3KD65 as seed ortholog is 100%.
Bootstrap support for H3GJ23 as seed ortholog is 100%.

Group of orthologs #1772. Best score 94 bits
Score difference with first non-orthologous sequence - C.immitis:94 P.ramorum:94

J3KEX8              	100.00%		H3GI79              	100.00%
Bootstrap support for J3KEX8 as seed ortholog is 100%.
Bootstrap support for H3GI79 as seed ortholog is 100%.

Group of orthologs #1773. Best score 94 bits
Score difference with first non-orthologous sequence - C.immitis:94 P.ramorum:94

J3K8K0              	100.00%		H3GRM7              	100.00%
Bootstrap support for J3K8K0 as seed ortholog is 100%.
Bootstrap support for H3GRM7 as seed ortholog is 100%.

Group of orthologs #1774. Best score 94 bits
Score difference with first non-orthologous sequence - C.immitis:94 P.ramorum:94

Q1E7S5              	100.00%		H3GJZ4              	100.00%
Bootstrap support for Q1E7S5 as seed ortholog is 100%.
Bootstrap support for H3GJZ4 as seed ortholog is 100%.

Group of orthologs #1775. Best score 94 bits
Score difference with first non-orthologous sequence - C.immitis:23 P.ramorum:94

J3KGJ1              	100.00%		H3GTA3              	100.00%
Bootstrap support for J3KGJ1 as seed ortholog is 20%.
Alternative seed ortholog is J3KKZ9 (23 bits away from this cluster)
Bootstrap support for H3GTA3 as seed ortholog is 100%.

Group of orthologs #1776. Best score 93 bits
Score difference with first non-orthologous sequence - C.immitis:93 P.ramorum:93

J0HGV9              	100.00%		H3GYN9              	100.00%
                    	       		H3GUP1              	37.93%
                    	       		H3GHV5              	11.73%
                    	       		H3GY32              	11.16%
                    	       		H3GYY8              	7.63%
                    	       		H3GNP5              	7.40%
Bootstrap support for J0HGV9 as seed ortholog is 100%.
Bootstrap support for H3GYN9 as seed ortholog is 100%.

Group of orthologs #1777. Best score 93 bits
Score difference with first non-orthologous sequence - C.immitis:93 P.ramorum:93

J3KJN5              	100.00%		H3GRY0              	100.00%
                    	       		H3GRX9              	56.16%
Bootstrap support for J3KJN5 as seed ortholog is 100%.
Bootstrap support for H3GRY0 as seed ortholog is 100%.

Group of orthologs #1778. Best score 93 bits
Score difference with first non-orthologous sequence - C.immitis:93 P.ramorum:93

J3K2S9              	100.00%		H3G7D9              	100.00%
Bootstrap support for J3K2S9 as seed ortholog is 100%.
Bootstrap support for H3G7D9 as seed ortholog is 100%.

Group of orthologs #1779. Best score 93 bits
Score difference with first non-orthologous sequence - C.immitis:93 P.ramorum:37

J3K340              	100.00%		H3GD88              	100.00%
Bootstrap support for J3K340 as seed ortholog is 100%.
Bootstrap support for H3GD88 as seed ortholog is 81%.

Group of orthologs #1780. Best score 93 bits
Score difference with first non-orthologous sequence - C.immitis:93 P.ramorum:93

J3KFW0              	100.00%		H3GG75              	100.00%
Bootstrap support for J3KFW0 as seed ortholog is 100%.
Bootstrap support for H3GG75 as seed ortholog is 100%.

Group of orthologs #1781. Best score 93 bits
Score difference with first non-orthologous sequence - C.immitis:93 P.ramorum:93

J3KCG3              	100.00%		H3GM11              	100.00%
Bootstrap support for J3KCG3 as seed ortholog is 100%.
Bootstrap support for H3GM11 as seed ortholog is 100%.

Group of orthologs #1782. Best score 93 bits
Score difference with first non-orthologous sequence - C.immitis:93 P.ramorum:93

J3KHC9              	100.00%		H3GS81              	100.00%
Bootstrap support for J3KHC9 as seed ortholog is 100%.
Bootstrap support for H3GS81 as seed ortholog is 100%.

Group of orthologs #1783. Best score 92 bits
Score difference with first non-orthologous sequence - C.immitis:92 P.ramorum:92

J3K2P5              	100.00%		H3GHB9              	100.00%
Bootstrap support for J3K2P5 as seed ortholog is 100%.
Bootstrap support for H3GHB9 as seed ortholog is 100%.

Group of orthologs #1784. Best score 92 bits
Score difference with first non-orthologous sequence - C.immitis:38 P.ramorum:92

J3K7U7              	100.00%		H3GIZ2              	100.00%
Bootstrap support for J3K7U7 as seed ortholog is 82%.
Bootstrap support for H3GIZ2 as seed ortholog is 100%.

Group of orthologs #1785. Best score 92 bits
Score difference with first non-orthologous sequence - C.immitis:92 P.ramorum:37

J3KDE1              	100.00%		H3GJ58              	100.00%
Bootstrap support for J3KDE1 as seed ortholog is 100%.
Bootstrap support for H3GJ58 as seed ortholog is 76%.

Group of orthologs #1786. Best score 92 bits
Score difference with first non-orthologous sequence - C.immitis:92 P.ramorum:92

J3K1X9              	100.00%		H3GYG9              	100.00%
Bootstrap support for J3K1X9 as seed ortholog is 100%.
Bootstrap support for H3GYG9 as seed ortholog is 100%.

Group of orthologs #1787. Best score 92 bits
Score difference with first non-orthologous sequence - C.immitis:92 P.ramorum:92

J3KIS0              	100.00%		H3GKR1              	100.00%
Bootstrap support for J3KIS0 as seed ortholog is 100%.
Bootstrap support for H3GKR1 as seed ortholog is 100%.

Group of orthologs #1788. Best score 92 bits
Score difference with first non-orthologous sequence - C.immitis:92 P.ramorum:92

J3KEX3              	100.00%		H3GT54              	100.00%
Bootstrap support for J3KEX3 as seed ortholog is 100%.
Bootstrap support for H3GT54 as seed ortholog is 100%.

Group of orthologs #1789. Best score 92 bits
Score difference with first non-orthologous sequence - C.immitis:92 P.ramorum:92

J3KJR4              	100.00%		H3GX45              	100.00%
Bootstrap support for J3KJR4 as seed ortholog is 100%.
Bootstrap support for H3GX45 as seed ortholog is 100%.

Group of orthologs #1790. Best score 92 bits
Score difference with first non-orthologous sequence - C.immitis:92 P.ramorum:92

J3KG51              	100.00%		H3HEC2              	100.00%
Bootstrap support for J3KG51 as seed ortholog is 100%.
Bootstrap support for H3HEC2 as seed ortholog is 100%.

Group of orthologs #1791. Best score 92 bits
Score difference with first non-orthologous sequence - C.immitis:92 P.ramorum:92

J3KK14              	100.00%		H3HCE6              	100.00%
Bootstrap support for J3KK14 as seed ortholog is 100%.
Bootstrap support for H3HCE6 as seed ortholog is 100%.

Group of orthologs #1792. Best score 91 bits
Score difference with first non-orthologous sequence - C.immitis:91 P.ramorum:6

J3KJS1              	100.00%		H3GDB1              	100.00%
                    	       		H3GJF7              	33.76%
                    	       		H3GJF6              	31.20%
                    	       		H3GY12              	19.18%
                    	       		H3GJR4              	19.18%
                    	       		H3GJR5              	17.14%
                    	       		H3GJR1              	16.88%
                    	       		H3GJR2              	16.62%
                    	       		H3GJR0              	15.86%
                    	       		H3GJQ9              	14.58%
                    	       		H3GJW3              	10.74%
Bootstrap support for J3KJS1 as seed ortholog is 100%.
Bootstrap support for H3GDB1 as seed ortholog is 54%.
Alternative seed ortholog is H3GJF5 (6 bits away from this cluster)

Group of orthologs #1793. Best score 91 bits
Score difference with first non-orthologous sequence - C.immitis:91 P.ramorum:23

I9XJZ8              	100.00%		H3H2B6              	100.00%
                    	       		H3GGN2              	93.15%
Bootstrap support for I9XJZ8 as seed ortholog is 100%.
Bootstrap support for H3H2B6 as seed ortholog is 81%.

Group of orthologs #1794. Best score 91 bits
Score difference with first non-orthologous sequence - C.immitis:91 P.ramorum:91

J3K1U9              	100.00%		H3GLI2              	100.00%
Bootstrap support for J3K1U9 as seed ortholog is 100%.
Bootstrap support for H3GLI2 as seed ortholog is 100%.

Group of orthologs #1795. Best score 91 bits
Score difference with first non-orthologous sequence - C.immitis:91 P.ramorum:91

J3K289              	100.00%		H3GS75              	100.00%
Bootstrap support for J3K289 as seed ortholog is 100%.
Bootstrap support for H3GS75 as seed ortholog is 100%.

Group of orthologs #1796. Best score 91 bits
Score difference with first non-orthologous sequence - C.immitis:91 P.ramorum:91

J3KFI0              	100.00%		H3GJ64              	100.00%
Bootstrap support for J3KFI0 as seed ortholog is 100%.
Bootstrap support for H3GJ64 as seed ortholog is 100%.

Group of orthologs #1797. Best score 91 bits
Score difference with first non-orthologous sequence - C.immitis:91 P.ramorum:91

J3KLZ9              	100.00%		H3GJR8              	100.00%
Bootstrap support for J3KLZ9 as seed ortholog is 100%.
Bootstrap support for H3GJR8 as seed ortholog is 100%.

Group of orthologs #1798. Best score 91 bits
Score difference with first non-orthologous sequence - C.immitis:91 P.ramorum:91

J3K474              	100.00%		H3H4D0              	100.00%
Bootstrap support for J3K474 as seed ortholog is 100%.
Bootstrap support for H3H4D0 as seed ortholog is 100%.

Group of orthologs #1799. Best score 90 bits
Score difference with first non-orthologous sequence - C.immitis:90 P.ramorum:90

J3K2V0              	100.00%		H3GJ54              	100.00%
Bootstrap support for J3K2V0 as seed ortholog is 100%.
Bootstrap support for H3GJ54 as seed ortholog is 100%.

Group of orthologs #1800. Best score 90 bits
Score difference with first non-orthologous sequence - C.immitis:90 P.ramorum:37

J3K5T0              	100.00%		H3GGR7              	100.00%
Bootstrap support for J3K5T0 as seed ortholog is 100%.
Bootstrap support for H3GGR7 as seed ortholog is 94%.

Group of orthologs #1801. Best score 90 bits
Score difference with first non-orthologous sequence - C.immitis:33 P.ramorum:90

J3KG15              	100.00%		H3GH42              	100.00%
Bootstrap support for J3KG15 as seed ortholog is 96%.
Bootstrap support for H3GH42 as seed ortholog is 100%.

Group of orthologs #1802. Best score 89 bits
Score difference with first non-orthologous sequence - C.immitis:89 P.ramorum:89

J3KDX4              	100.00%		H3GDJ2              	100.00%
J3KMA9              	100.00%		H3GDI6              	100.00%
J3KLQ0              	33.23%		H3GDJ3              	61.22%
                    	       		H3HB30              	50.99%
                    	       		H3GWP8              	48.51%
                    	       		H3GDI0              	46.86%
                    	       		H3GDJ0              	44.39%
                    	       		H3GDI1              	43.61%
                    	       		H3GDH9              	42.75%
                    	       		H3GDJ5              	34.49%
                    	       		H3GDJ1              	32.01%
                    	       		H3GDJ4              	31.85%
                    	       		H3GDI9              	25.58%
                    	       		H3GDH7              	23.43%
                    	       		H3GK53              	22.28%
                    	       		H3GNE1              	20.77%
                    	       		H3GNE0              	17.00%
                    	       		H3HD30              	16.65%
                    	       		H3HCC4              	15.62%
Bootstrap support for J3KDX4 as seed ortholog is 100%.
Bootstrap support for J3KMA9 as seed ortholog is 100%.
Bootstrap support for H3GDJ2 as seed ortholog is 100%.
Bootstrap support for H3GDI6 as seed ortholog is 100%.

Group of orthologs #1803. Best score 89 bits
Score difference with first non-orthologous sequence - C.immitis:89 P.ramorum:89

J3KGY7              	100.00%		H3GWY6              	100.00%
                    	       		H3GDI7              	27.04%
                    	       		H3GDI8              	26.46%
                    	       		H3GG77              	25.97%
                    	       		H3GIC2              	25.29%
                    	       		H3H044              	25.10%
                    	       		H3H440              	25.10%
                    	       		H3H043              	25.00%
                    	       		H3H438              	24.81%
                    	       		H3H929              	24.51%
                    	       		H3H8M2              	22.57%
                    	       		H3GG78              	21.89%
                    	       		H3H7H1              	20.82%
Bootstrap support for J3KGY7 as seed ortholog is 100%.
Bootstrap support for H3GWY6 as seed ortholog is 100%.

Group of orthologs #1804. Best score 89 bits
Score difference with first non-orthologous sequence - C.immitis:89 P.ramorum:89

J3KK06              	100.00%		H3GUM5              	100.00%
                    	       		H3GUM6              	34.87%
Bootstrap support for J3KK06 as seed ortholog is 100%.
Bootstrap support for H3GUM5 as seed ortholog is 100%.

Group of orthologs #1805. Best score 89 bits
Score difference with first non-orthologous sequence - C.immitis:89 P.ramorum:89

P0CL20              	100.00%		H3HDW9              	100.00%
J3K9V7              	18.08%		
Bootstrap support for P0CL20 as seed ortholog is 100%.
Bootstrap support for H3HDW9 as seed ortholog is 100%.

Group of orthologs #1806. Best score 89 bits
Score difference with first non-orthologous sequence - C.immitis:89 P.ramorum:89

I9NPY2              	100.00%		H3G844              	100.00%
Bootstrap support for I9NPY2 as seed ortholog is 100%.
Bootstrap support for H3G844 as seed ortholog is 100%.

Group of orthologs #1807. Best score 89 bits
Score difference with first non-orthologous sequence - C.immitis:89 P.ramorum:89

J3K859              	100.00%		H3G5I2              	100.00%
Bootstrap support for J3K859 as seed ortholog is 100%.
Bootstrap support for H3G5I2 as seed ortholog is 100%.

Group of orthologs #1808. Best score 89 bits
Score difference with first non-orthologous sequence - C.immitis:89 P.ramorum:89

J3K873              	100.00%		H3GVL0              	100.00%
Bootstrap support for J3K873 as seed ortholog is 100%.
Bootstrap support for H3GVL0 as seed ortholog is 100%.

Group of orthologs #1809. Best score 89 bits
Score difference with first non-orthologous sequence - C.immitis:89 P.ramorum:89

J3KFR5              	100.00%		H3GTR5              	100.00%
Bootstrap support for J3KFR5 as seed ortholog is 100%.
Bootstrap support for H3GTR5 as seed ortholog is 100%.

Group of orthologs #1810. Best score 89 bits
Score difference with first non-orthologous sequence - C.immitis:89 P.ramorum:89

Q1DM35              	100.00%		H3H2K5              	100.00%
Bootstrap support for Q1DM35 as seed ortholog is 100%.
Bootstrap support for H3H2K5 as seed ortholog is 100%.

Group of orthologs #1811. Best score 88 bits
Score difference with first non-orthologous sequence - C.immitis:88 P.ramorum:88

J3KFV8              	100.00%		H3GMQ5              	100.00%
J3KM66              	100.00%		H3GMQ4              	100.00%
J3K109              	74.70%		H3GMQ2              	92.42%
J3KAP6              	42.76%		H3GMQ3              	90.29%
J3K470              	39.50%		H3H6B3              	74.01%
J3K9B5              	24.28%		H3GMY7              	57.04%
J3KGI9              	18.77%		H3GH90              	47.43%
J3KIQ4              	18.49%		H3GH89              	47.41%
J3K5T7              	6.36%		H3H5E6              	29.49%
Bootstrap support for J3KFV8 as seed ortholog is 100%.
Bootstrap support for J3KM66 as seed ortholog is 100%.
Bootstrap support for H3GMQ5 as seed ortholog is 100%.
Bootstrap support for H3GMQ4 as seed ortholog is 100%.

Group of orthologs #1812. Best score 88 bits
Score difference with first non-orthologous sequence - C.immitis:88 P.ramorum:88

J3K2E6              	100.00%		H3G6W0              	100.00%
Bootstrap support for J3K2E6 as seed ortholog is 100%.
Bootstrap support for H3G6W0 as seed ortholog is 100%.

Group of orthologs #1813. Best score 88 bits
Score difference with first non-orthologous sequence - C.immitis:88 P.ramorum:88

J3K481              	100.00%		H3G5A1              	100.00%
Bootstrap support for J3K481 as seed ortholog is 100%.
Bootstrap support for H3G5A1 as seed ortholog is 100%.

Group of orthologs #1814. Best score 88 bits
Score difference with first non-orthologous sequence - C.immitis:88 P.ramorum:88

J3KDN0              	100.00%		H3G6S5              	100.00%
Bootstrap support for J3KDN0 as seed ortholog is 100%.
Bootstrap support for H3G6S5 as seed ortholog is 100%.

Group of orthologs #1815. Best score 88 bits
Score difference with first non-orthologous sequence - C.immitis:88 P.ramorum:88

J3KIG1              	100.00%		H3G8C2              	100.00%
Bootstrap support for J3KIG1 as seed ortholog is 100%.
Bootstrap support for H3G8C2 as seed ortholog is 100%.

Group of orthologs #1816. Best score 88 bits
Score difference with first non-orthologous sequence - C.immitis:88 P.ramorum:88

J3KMB8              	100.00%		H3G8J4              	100.00%
Bootstrap support for J3KMB8 as seed ortholog is 100%.
Bootstrap support for H3G8J4 as seed ortholog is 100%.

Group of orthologs #1817. Best score 88 bits
Score difference with first non-orthologous sequence - C.immitis:88 P.ramorum:88

J3KKX2              	100.00%		H3GIA2              	100.00%
Bootstrap support for J3KKX2 as seed ortholog is 100%.
Bootstrap support for H3GIA2 as seed ortholog is 100%.

Group of orthologs #1818. Best score 88 bits
Score difference with first non-orthologous sequence - C.immitis:88 P.ramorum:88

J3K5P0              	100.00%		H3HAV5              	100.00%
Bootstrap support for J3K5P0 as seed ortholog is 100%.
Bootstrap support for H3HAV5 as seed ortholog is 100%.

Group of orthologs #1819. Best score 87 bits
Score difference with first non-orthologous sequence - C.immitis:87 P.ramorum:87

J3KGM1              	100.00%		H3GH35              	100.00%
                    	       		H3H5H0              	100.00%
Bootstrap support for J3KGM1 as seed ortholog is 100%.
Bootstrap support for H3GH35 as seed ortholog is 100%.
Bootstrap support for H3H5H0 as seed ortholog is 100%.

Group of orthologs #1820. Best score 87 bits
Score difference with first non-orthologous sequence - C.immitis:87 P.ramorum:87

I9XIT8              	100.00%		H3GRS3              	100.00%
Bootstrap support for I9XIT8 as seed ortholog is 100%.
Bootstrap support for H3GRS3 as seed ortholog is 100%.

Group of orthologs #1821. Best score 87 bits
Score difference with first non-orthologous sequence - C.immitis:87 P.ramorum:87

J3KHT4              	100.00%		H3GBG6              	100.00%
Bootstrap support for J3KHT4 as seed ortholog is 100%.
Bootstrap support for H3GBG6 as seed ortholog is 100%.

Group of orthologs #1822. Best score 87 bits
Score difference with first non-orthologous sequence - C.immitis:87 P.ramorum:87

J3KLC8              	100.00%		H3GGQ0              	100.00%
Bootstrap support for J3KLC8 as seed ortholog is 100%.
Bootstrap support for H3GGQ0 as seed ortholog is 100%.

Group of orthologs #1823. Best score 87 bits
Score difference with first non-orthologous sequence - C.immitis:87 P.ramorum:87

J3K1N9              	100.00%		H3HD16              	100.00%
Bootstrap support for J3K1N9 as seed ortholog is 100%.
Bootstrap support for H3HD16 as seed ortholog is 100%.

Group of orthologs #1824. Best score 87 bits
Score difference with first non-orthologous sequence - C.immitis:87 P.ramorum:87

J3KH48              	100.00%		H3H1C1              	100.00%
Bootstrap support for J3KH48 as seed ortholog is 100%.
Bootstrap support for H3H1C1 as seed ortholog is 100%.

Group of orthologs #1825. Best score 86 bits
Score difference with first non-orthologous sequence - C.immitis:86 P.ramorum:86

J3KHT0              	100.00%		H3HA43              	100.00%
                    	       		H3HEF4              	100.00%
Bootstrap support for J3KHT0 as seed ortholog is 100%.
Bootstrap support for H3HA43 as seed ortholog is 100%.
Bootstrap support for H3HEF4 as seed ortholog is 100%.

Group of orthologs #1826. Best score 86 bits
Score difference with first non-orthologous sequence - C.immitis:86 P.ramorum:86

J3K2D1              	100.00%		H3GBN0              	100.00%
Bootstrap support for J3K2D1 as seed ortholog is 100%.
Bootstrap support for H3GBN0 as seed ortholog is 100%.

Group of orthologs #1827. Best score 86 bits
Score difference with first non-orthologous sequence - C.immitis:86 P.ramorum:86

J3KCQ9              	100.00%		H3G531              	100.00%
Bootstrap support for J3KCQ9 as seed ortholog is 100%.
Bootstrap support for H3G531 as seed ortholog is 100%.

Group of orthologs #1828. Best score 86 bits
Score difference with first non-orthologous sequence - C.immitis:86 P.ramorum:86

J3K0F9              	100.00%		H3GVD1              	100.00%
Bootstrap support for J3K0F9 as seed ortholog is 100%.
Bootstrap support for H3GVD1 as seed ortholog is 100%.

Group of orthologs #1829. Best score 86 bits
Score difference with first non-orthologous sequence - C.immitis:86 P.ramorum:86

J3KIC8              	100.00%		H3GVL9              	100.00%
Bootstrap support for J3KIC8 as seed ortholog is 100%.
Bootstrap support for H3GVL9 as seed ortholog is 100%.

Group of orthologs #1830. Best score 86 bits
Score difference with first non-orthologous sequence - C.immitis:86 P.ramorum:86

J3KKS1              	100.00%		H3H0P5              	100.00%
Bootstrap support for J3KKS1 as seed ortholog is 100%.
Bootstrap support for H3H0P5 as seed ortholog is 100%.

Group of orthologs #1831. Best score 86 bits
Score difference with first non-orthologous sequence - C.immitis:86 P.ramorum:86

J3KCZ1              	100.00%		H3HBE8              	100.00%
Bootstrap support for J3KCZ1 as seed ortholog is 100%.
Bootstrap support for H3HBE8 as seed ortholog is 100%.

Group of orthologs #1832. Best score 85 bits
Score difference with first non-orthologous sequence - C.immitis:85 P.ramorum:85

J3K3A3              	100.00%		H3GE21              	100.00%
                    	       		H3H7P4              	57.02%
Bootstrap support for J3K3A3 as seed ortholog is 100%.
Bootstrap support for H3GE21 as seed ortholog is 100%.

Group of orthologs #1833. Best score 85 bits
Score difference with first non-orthologous sequence - C.immitis:85 P.ramorum:85

J3K071              	100.00%		H3GHS4              	100.00%
J3KBH6              	10.08%		
Bootstrap support for J3K071 as seed ortholog is 100%.
Bootstrap support for H3GHS4 as seed ortholog is 100%.

Group of orthologs #1834. Best score 85 bits
Score difference with first non-orthologous sequence - C.immitis:85 P.ramorum:85

I9XMW0              	100.00%		H3GPP2              	100.00%
Bootstrap support for I9XMW0 as seed ortholog is 100%.
Bootstrap support for H3GPP2 as seed ortholog is 100%.

Group of orthologs #1835. Best score 85 bits
Score difference with first non-orthologous sequence - C.immitis:85 P.ramorum:85

J3KHS3              	100.00%		H3GG85              	100.00%
Bootstrap support for J3KHS3 as seed ortholog is 100%.
Bootstrap support for H3GG85 as seed ortholog is 100%.

Group of orthologs #1836. Best score 85 bits
Score difference with first non-orthologous sequence - C.immitis:85 P.ramorum:85

J3K2G7              	100.00%		H3GWN0              	100.00%
Bootstrap support for J3K2G7 as seed ortholog is 100%.
Bootstrap support for H3GWN0 as seed ortholog is 100%.

Group of orthologs #1837. Best score 85 bits
Score difference with first non-orthologous sequence - C.immitis:43 P.ramorum:1

J3KHF0              	100.00%		H3GSP0              	100.00%
Bootstrap support for J3KHF0 as seed ortholog is 86%.
Bootstrap support for H3GSP0 as seed ortholog is 52%.
Alternative seed ortholog is H3GP77 (1 bits away from this cluster)

Group of orthologs #1838. Best score 84 bits
Score difference with first non-orthologous sequence - C.immitis:41 P.ramorum:84

J3KFB5              	100.00%		H3GVJ1              	100.00%
                    	       		H3GVJ2              	86.20%
                    	       		H3GWC9              	53.37%
                    	       		H3GWC7              	52.72%
                    	       		H3GWD0              	31.41%
                    	       		H3GWC8              	30.87%
Bootstrap support for J3KFB5 as seed ortholog is 80%.
Bootstrap support for H3GVJ1 as seed ortholog is 100%.

Group of orthologs #1839. Best score 84 bits
Score difference with first non-orthologous sequence - C.immitis:84 P.ramorum:84

J3K995              	100.00%		H3G7J4              	100.00%
Bootstrap support for J3K995 as seed ortholog is 100%.
Bootstrap support for H3G7J4 as seed ortholog is 100%.

Group of orthologs #1840. Best score 84 bits
Score difference with first non-orthologous sequence - C.immitis:84 P.ramorum:84

J3K7B0              	100.00%		H3GLG9              	100.00%
Bootstrap support for J3K7B0 as seed ortholog is 100%.
Bootstrap support for H3GLG9 as seed ortholog is 100%.

Group of orthologs #1841. Best score 84 bits
Score difference with first non-orthologous sequence - C.immitis:84 P.ramorum:84

I9NPS1              	100.00%		H3H3Q9              	100.00%
Bootstrap support for I9NPS1 as seed ortholog is 100%.
Bootstrap support for H3H3Q9 as seed ortholog is 100%.

Group of orthologs #1842. Best score 84 bits
Score difference with first non-orthologous sequence - C.immitis:84 P.ramorum:29

J3K386              	100.00%		H3GZZ3              	100.00%
Bootstrap support for J3K386 as seed ortholog is 100%.
Bootstrap support for H3GZZ3 as seed ortholog is 70%.
Alternative seed ortholog is H3H253 (29 bits away from this cluster)

Group of orthologs #1843. Best score 84 bits
Score difference with first non-orthologous sequence - C.immitis:84 P.ramorum:84

J3KDQ7              	100.00%		H3GTT9              	100.00%
Bootstrap support for J3KDQ7 as seed ortholog is 100%.
Bootstrap support for H3GTT9 as seed ortholog is 100%.

Group of orthologs #1844. Best score 84 bits
Score difference with first non-orthologous sequence - C.immitis:84 P.ramorum:84

J3K533              	100.00%		H3HBE7              	100.00%
Bootstrap support for J3K533 as seed ortholog is 100%.
Bootstrap support for H3HBE7 as seed ortholog is 100%.

Group of orthologs #1845. Best score 83 bits
Score difference with first non-orthologous sequence - C.immitis:83 P.ramorum:83

I9NKM9              	100.00%		H3GH30              	100.00%
Bootstrap support for I9NKM9 as seed ortholog is 100%.
Bootstrap support for H3GH30 as seed ortholog is 100%.

Group of orthologs #1846. Best score 83 bits
Score difference with first non-orthologous sequence - C.immitis:83 P.ramorum:83

I9NPS6              	100.00%		H3GTR1              	100.00%
Bootstrap support for I9NPS6 as seed ortholog is 100%.
Bootstrap support for H3GTR1 as seed ortholog is 100%.

Group of orthologs #1847. Best score 83 bits
Score difference with first non-orthologous sequence - C.immitis:83 P.ramorum:83

Q1DQS9              	100.00%		H3G6T3              	100.00%
Bootstrap support for Q1DQS9 as seed ortholog is 100%.
Bootstrap support for H3G6T3 as seed ortholog is 100%.

Group of orthologs #1848. Best score 83 bits
Score difference with first non-orthologous sequence - C.immitis:83 P.ramorum:31

J3KK32              	100.00%		H3GFP9              	100.00%
Bootstrap support for J3KK32 as seed ortholog is 100%.
Bootstrap support for H3GFP9 as seed ortholog is 92%.

Group of orthologs #1849. Best score 83 bits
Score difference with first non-orthologous sequence - C.immitis:83 P.ramorum:83

J3K9V9              	100.00%		H3GSF7              	100.00%
Bootstrap support for J3K9V9 as seed ortholog is 100%.
Bootstrap support for H3GSF7 as seed ortholog is 100%.

Group of orthologs #1850. Best score 83 bits
Score difference with first non-orthologous sequence - C.immitis:83 P.ramorum:83

Q1E8Q5              	100.00%		H3GIM7              	100.00%
Bootstrap support for Q1E8Q5 as seed ortholog is 100%.
Bootstrap support for H3GIM7 as seed ortholog is 100%.

Group of orthologs #1851. Best score 83 bits
Score difference with first non-orthologous sequence - C.immitis:83 P.ramorum:83

J3KB62              	100.00%		H3GVV6              	100.00%
Bootstrap support for J3KB62 as seed ortholog is 100%.
Bootstrap support for H3GVV6 as seed ortholog is 100%.

Group of orthologs #1852. Best score 82 bits
Score difference with first non-orthologous sequence - C.immitis:82 P.ramorum:82

J3K054              	100.00%		H3H4G7              	100.00%
                    	       		H3GB35              	68.28%
                    	       		H3GAW2              	67.20%
                    	       		H3GFV7              	58.06%
Bootstrap support for J3K054 as seed ortholog is 100%.
Bootstrap support for H3H4G7 as seed ortholog is 100%.

Group of orthologs #1853. Best score 82 bits
Score difference with first non-orthologous sequence - C.immitis:82 P.ramorum:82

J3K997              	100.00%		H3GC99              	100.00%
Bootstrap support for J3K997 as seed ortholog is 100%.
Bootstrap support for H3GC99 as seed ortholog is 100%.

Group of orthologs #1854. Best score 82 bits
Score difference with first non-orthologous sequence - C.immitis:82 P.ramorum:82

J3KHY0              	100.00%		H3G6S7              	100.00%
Bootstrap support for J3KHY0 as seed ortholog is 100%.
Bootstrap support for H3G6S7 as seed ortholog is 100%.

Group of orthologs #1855. Best score 82 bits
Score difference with first non-orthologous sequence - C.immitis:82 P.ramorum:82

J3K3Y2              	100.00%		H3GMH6              	100.00%
Bootstrap support for J3K3Y2 as seed ortholog is 100%.
Bootstrap support for H3GMH6 as seed ortholog is 100%.

Group of orthologs #1856. Best score 82 bits
Score difference with first non-orthologous sequence - C.immitis:82 P.ramorum:82

J3KBS8              	100.00%		H3GI53              	100.00%
Bootstrap support for J3KBS8 as seed ortholog is 100%.
Bootstrap support for H3GI53 as seed ortholog is 100%.

Group of orthologs #1857. Best score 82 bits
Score difference with first non-orthologous sequence - C.immitis:82 P.ramorum:82

J0HH84              	100.00%		H3GYK3              	100.00%
Bootstrap support for J0HH84 as seed ortholog is 100%.
Bootstrap support for H3GYK3 as seed ortholog is 100%.

Group of orthologs #1858. Best score 82 bits
Score difference with first non-orthologous sequence - C.immitis:82 P.ramorum:15

J3K3Q8              	100.00%		H3GVW1              	100.00%
Bootstrap support for J3K3Q8 as seed ortholog is 100%.
Bootstrap support for H3GVW1 as seed ortholog is 74%.
Alternative seed ortholog is H3G991 (15 bits away from this cluster)

Group of orthologs #1859. Best score 82 bits
Score difference with first non-orthologous sequence - C.immitis:82 P.ramorum:82

J3K6A8              	100.00%		H3GWX5              	100.00%
Bootstrap support for J3K6A8 as seed ortholog is 100%.
Bootstrap support for H3GWX5 as seed ortholog is 100%.

Group of orthologs #1860. Best score 82 bits
Score difference with first non-orthologous sequence - C.immitis:32 P.ramorum:4

J3KMB4              	100.00%		H3GHN6              	100.00%
Bootstrap support for J3KMB4 as seed ortholog is 81%.
Bootstrap support for H3GHN6 as seed ortholog is 52%.
Alternative seed ortholog is H3G8H9 (4 bits away from this cluster)

Group of orthologs #1861. Best score 82 bits
Score difference with first non-orthologous sequence - C.immitis:82 P.ramorum:82

J3KJT3              	100.00%		H3GMW3              	100.00%
Bootstrap support for J3KJT3 as seed ortholog is 100%.
Bootstrap support for H3GMW3 as seed ortholog is 100%.

Group of orthologs #1862. Best score 81 bits
Score difference with first non-orthologous sequence - C.immitis:22 P.ramorum:81

J3K4B1              	100.00%		H3GBA4              	100.00%
J3K4W8              	100.00%		H3H0H0              	61.71%
J3K977              	5.32%		
Bootstrap support for J3K4B1 as seed ortholog is 47%.
Alternative seed ortholog is J3K438 (22 bits away from this cluster)
Bootstrap support for J3K4W8 as seed ortholog is 41%.
Alternative seed ortholog is J3K438 (22 bits away from this cluster)
Bootstrap support for H3GBA4 as seed ortholog is 100%.

Group of orthologs #1863. Best score 81 bits
Score difference with first non-orthologous sequence - C.immitis:81 P.ramorum:81

J3K7F8              	100.00%		H3H3J5              	100.00%
                    	       		H3HA58              	94.67%
                    	       		H3H3K2              	54.60%
                    	       		H3H3K0              	42.81%
Bootstrap support for J3K7F8 as seed ortholog is 100%.
Bootstrap support for H3H3J5 as seed ortholog is 100%.

Group of orthologs #1864. Best score 81 bits
Score difference with first non-orthologous sequence - C.immitis:81 P.ramorum:81

J3KL08              	100.00%		H3GPZ0              	100.00%
J3KBK0              	100.00%		H3GTS6              	100.00%
Bootstrap support for J3KL08 as seed ortholog is 100%.
Bootstrap support for J3KBK0 as seed ortholog is 100%.
Bootstrap support for H3GPZ0 as seed ortholog is 100%.
Bootstrap support for H3GTS6 as seed ortholog is 100%.

Group of orthologs #1865. Best score 81 bits
Score difference with first non-orthologous sequence - C.immitis:81 P.ramorum:81

J3KGI3              	100.00%		H3GRD9              	100.00%
Bootstrap support for J3KGI3 as seed ortholog is 100%.
Bootstrap support for H3GRD9 as seed ortholog is 100%.

Group of orthologs #1866. Best score 81 bits
Score difference with first non-orthologous sequence - C.immitis:81 P.ramorum:81

J3K0C0              	100.00%		H3HE66              	100.00%
Bootstrap support for J3K0C0 as seed ortholog is 100%.
Bootstrap support for H3HE66 as seed ortholog is 100%.

Group of orthologs #1867. Best score 81 bits
Score difference with first non-orthologous sequence - C.immitis:81 P.ramorum:81

J3KDT5              	100.00%		H3HDX2              	100.00%
Bootstrap support for J3KDT5 as seed ortholog is 100%.
Bootstrap support for H3HDX2 as seed ortholog is 100%.

Group of orthologs #1868. Best score 81 bits
Score difference with first non-orthologous sequence - C.immitis:81 P.ramorum:81

J3KKF8              	100.00%		H3HBH6              	100.00%
Bootstrap support for J3KKF8 as seed ortholog is 100%.
Bootstrap support for H3HBH6 as seed ortholog is 100%.

Group of orthologs #1869. Best score 80 bits
Score difference with first non-orthologous sequence - C.immitis:80 P.ramorum:80

J3KEC6              	100.00%		H3G8N4              	100.00%
Bootstrap support for J3KEC6 as seed ortholog is 100%.
Bootstrap support for H3G8N4 as seed ortholog is 100%.

Group of orthologs #1870. Best score 80 bits
Score difference with first non-orthologous sequence - C.immitis:80 P.ramorum:80

J0HH91              	100.00%		H3H4Q6              	100.00%
Bootstrap support for J0HH91 as seed ortholog is 100%.
Bootstrap support for H3H4Q6 as seed ortholog is 100%.

Group of orthologs #1871. Best score 79 bits
Score difference with first non-orthologous sequence - C.immitis:79 P.ramorum:28

I9NSM1              	100.00%		H3GNA2              	100.00%
Bootstrap support for I9NSM1 as seed ortholog is 100%.
Bootstrap support for H3GNA2 as seed ortholog is 92%.

Group of orthologs #1872. Best score 79 bits
Score difference with first non-orthologous sequence - C.immitis:79 P.ramorum:79

J3K571              	100.00%		H3GKR4              	100.00%
Bootstrap support for J3K571 as seed ortholog is 100%.
Bootstrap support for H3GKR4 as seed ortholog is 100%.

Group of orthologs #1873. Best score 79 bits
Score difference with first non-orthologous sequence - C.immitis:79 P.ramorum:79

Q1EAW8              	100.00%		H3GCK2              	100.00%
Bootstrap support for Q1EAW8 as seed ortholog is 100%.
Bootstrap support for H3GCK2 as seed ortholog is 100%.

Group of orthologs #1874. Best score 79 bits
Score difference with first non-orthologous sequence - C.immitis:79 P.ramorum:25

J3KMC4              	100.00%		H3GMD8              	100.00%
Bootstrap support for J3KMC4 as seed ortholog is 100%.
Bootstrap support for H3GMD8 as seed ortholog is 69%.
Alternative seed ortholog is H3H4R0 (25 bits away from this cluster)

Group of orthologs #1875. Best score 79 bits
Score difference with first non-orthologous sequence - C.immitis:79 P.ramorum:79

J3KFG5              	100.00%		H3GYJ7              	100.00%
Bootstrap support for J3KFG5 as seed ortholog is 100%.
Bootstrap support for H3GYJ7 as seed ortholog is 100%.

Group of orthologs #1876. Best score 79 bits
Score difference with first non-orthologous sequence - C.immitis:79 P.ramorum:79

J3K861              	100.00%		H3HBL0              	100.00%
Bootstrap support for J3K861 as seed ortholog is 100%.
Bootstrap support for H3HBL0 as seed ortholog is 100%.

Group of orthologs #1877. Best score 79 bits
Score difference with first non-orthologous sequence - C.immitis:79 P.ramorum:79

J3KMA5              	100.00%		H3H021              	100.00%
Bootstrap support for J3KMA5 as seed ortholog is 100%.
Bootstrap support for H3H021 as seed ortholog is 100%.

Group of orthologs #1878. Best score 78 bits
Score difference with first non-orthologous sequence - C.immitis:78 P.ramorum:78

J3K601              	100.00%		H3GG37              	100.00%
J0HE21              	12.06%		
I9XM42              	11.44%		
Bootstrap support for J3K601 as seed ortholog is 100%.
Bootstrap support for H3GG37 as seed ortholog is 100%.

Group of orthologs #1879. Best score 78 bits
Score difference with first non-orthologous sequence - C.immitis:78 P.ramorum:78

J3KH08              	100.00%		H3G8I8              	100.00%
                    	       		H3H5F1              	19.23%
Bootstrap support for J3KH08 as seed ortholog is 100%.
Bootstrap support for H3G8I8 as seed ortholog is 100%.

Group of orthologs #1880. Best score 78 bits
Score difference with first non-orthologous sequence - C.immitis:78 P.ramorum:78

J3K0B2              	100.00%		H3G707              	100.00%
Bootstrap support for J3K0B2 as seed ortholog is 100%.
Bootstrap support for H3G707 as seed ortholog is 100%.

Group of orthologs #1881. Best score 78 bits
Score difference with first non-orthologous sequence - C.immitis:78 P.ramorum:78

J3K543              	100.00%		H3HEE5              	100.00%
Bootstrap support for J3K543 as seed ortholog is 100%.
Bootstrap support for H3HEE5 as seed ortholog is 100%.

Group of orthologs #1882. Best score 77 bits
Score difference with first non-orthologous sequence - C.immitis:77 P.ramorum:77

J3K3H6              	100.00%		H3H5E4              	100.00%
                    	       		H3GF51              	40.23%
                    	       		H3H5E3              	35.26%
                    	       		H3H5E2              	9.60%
Bootstrap support for J3K3H6 as seed ortholog is 100%.
Bootstrap support for H3H5E4 as seed ortholog is 100%.

Group of orthologs #1883. Best score 77 bits
Score difference with first non-orthologous sequence - C.immitis:77 P.ramorum:77

J3K9P4              	100.00%		H3G6J0              	100.00%
Bootstrap support for J3K9P4 as seed ortholog is 100%.
Bootstrap support for H3G6J0 as seed ortholog is 100%.

Group of orthologs #1884. Best score 77 bits
Score difference with first non-orthologous sequence - C.immitis:77 P.ramorum:77

J3KHH3              	100.00%		H3G5M1              	100.00%
Bootstrap support for J3KHH3 as seed ortholog is 100%.
Bootstrap support for H3G5M1 as seed ortholog is 100%.

Group of orthologs #1885. Best score 77 bits
Score difference with first non-orthologous sequence - C.immitis:77 P.ramorum:77

J3KA11              	100.00%		H3GH43              	100.00%
Bootstrap support for J3KA11 as seed ortholog is 100%.
Bootstrap support for H3GH43 as seed ortholog is 100%.

Group of orthologs #1886. Best score 77 bits
Score difference with first non-orthologous sequence - C.immitis:77 P.ramorum:77

J0HEL3              	100.00%		H3GV34              	100.00%
Bootstrap support for J0HEL3 as seed ortholog is 100%.
Bootstrap support for H3GV34 as seed ortholog is 100%.

Group of orthologs #1887. Best score 77 bits
Score difference with first non-orthologous sequence - C.immitis:77 P.ramorum:77

J3KJX5              	100.00%		H3GEA7              	100.00%
Bootstrap support for J3KJX5 as seed ortholog is 100%.
Bootstrap support for H3GEA7 as seed ortholog is 100%.

Group of orthologs #1888. Best score 77 bits
Score difference with first non-orthologous sequence - C.immitis:77 P.ramorum:20

J3K4S5              	100.00%		H3H1D1              	100.00%
Bootstrap support for J3K4S5 as seed ortholog is 100%.
Bootstrap support for H3H1D1 as seed ortholog is 71%.
Alternative seed ortholog is H3GFL0 (20 bits away from this cluster)

Group of orthologs #1889. Best score 77 bits
Score difference with first non-orthologous sequence - C.immitis:77 P.ramorum:77

J3KJH9              	100.00%		H3GMX0              	100.00%
Bootstrap support for J3KJH9 as seed ortholog is 100%.
Bootstrap support for H3GMX0 as seed ortholog is 100%.

Group of orthologs #1890. Best score 77 bits
Score difference with first non-orthologous sequence - C.immitis:77 P.ramorum:77

J3KB78              	100.00%		H3GWJ4              	100.00%
Bootstrap support for J3KB78 as seed ortholog is 100%.
Bootstrap support for H3GWJ4 as seed ortholog is 100%.

Group of orthologs #1891. Best score 77 bits
Score difference with first non-orthologous sequence - C.immitis:77 P.ramorum:77

J3KM81              	100.00%		H3GXG3              	100.00%
Bootstrap support for J3KM81 as seed ortholog is 100%.
Bootstrap support for H3GXG3 as seed ortholog is 100%.

Group of orthologs #1892. Best score 76 bits
Score difference with first non-orthologous sequence - C.immitis:76 P.ramorum:76

J3KGY9              	100.00%		H3G819              	100.00%
                    	       		H3G820              	84.85%
Bootstrap support for J3KGY9 as seed ortholog is 100%.
Bootstrap support for H3G819 as seed ortholog is 100%.

Group of orthologs #1893. Best score 76 bits
Score difference with first non-orthologous sequence - C.immitis:76 P.ramorum:76

J3KBH5              	100.00%		H3GG35              	100.00%
                    	       		H3H388              	11.47%
Bootstrap support for J3KBH5 as seed ortholog is 100%.
Bootstrap support for H3GG35 as seed ortholog is 100%.

Group of orthologs #1894. Best score 76 bits
Score difference with first non-orthologous sequence - C.immitis:76 P.ramorum:12

J3KH41              	100.00%		H3GQU3              	100.00%
                    	       		H3H609              	78.02%
Bootstrap support for J3KH41 as seed ortholog is 100%.
Bootstrap support for H3GQU3 as seed ortholog is 88%.

Group of orthologs #1895. Best score 76 bits
Score difference with first non-orthologous sequence - C.immitis:76 P.ramorum:76

J3KFE9              	100.00%		H3GZW4              	100.00%
J3KEG1              	22.72%		
Bootstrap support for J3KFE9 as seed ortholog is 100%.
Bootstrap support for H3GZW4 as seed ortholog is 100%.

Group of orthologs #1896. Best score 76 bits
Score difference with first non-orthologous sequence - C.immitis:76 P.ramorum:18

J3K4I0              	100.00%		H3G7Q1              	100.00%
Bootstrap support for J3K4I0 as seed ortholog is 100%.
Bootstrap support for H3G7Q1 as seed ortholog is 91%.

Group of orthologs #1897. Best score 76 bits
Score difference with first non-orthologous sequence - C.immitis:76 P.ramorum:76

J0HHI0              	100.00%		H3GID2              	100.00%
Bootstrap support for J0HHI0 as seed ortholog is 100%.
Bootstrap support for H3GID2 as seed ortholog is 100%.

Group of orthologs #1898. Best score 76 bits
Score difference with first non-orthologous sequence - C.immitis:31 P.ramorum:76

J3K7L0              	100.00%		H3GHS0              	100.00%
Bootstrap support for J3K7L0 as seed ortholog is 75%.
Bootstrap support for H3GHS0 as seed ortholog is 100%.

Group of orthologs #1899. Best score 76 bits
Score difference with first non-orthologous sequence - C.immitis:76 P.ramorum:76

J3K4Y3              	100.00%		H3GVL8              	100.00%
Bootstrap support for J3K4Y3 as seed ortholog is 100%.
Bootstrap support for H3GVL8 as seed ortholog is 100%.

Group of orthologs #1900. Best score 76 bits
Score difference with first non-orthologous sequence - C.immitis:76 P.ramorum:76

Q1DYR7              	100.00%		H3GE49              	100.00%
Bootstrap support for Q1DYR7 as seed ortholog is 100%.
Bootstrap support for H3GE49 as seed ortholog is 100%.

Group of orthologs #1901. Best score 76 bits
Score difference with first non-orthologous sequence - C.immitis:76 P.ramorum:76

J3KLR5              	100.00%		H3GM24              	100.00%
Bootstrap support for J3KLR5 as seed ortholog is 100%.
Bootstrap support for H3GM24 as seed ortholog is 100%.

Group of orthologs #1902. Best score 76 bits
Score difference with first non-orthologous sequence - C.immitis:13 P.ramorum:76

J3KDF5              	100.00%		H3H103              	100.00%
Bootstrap support for J3KDF5 as seed ortholog is 72%.
Alternative seed ortholog is J3KC13 (13 bits away from this cluster)
Bootstrap support for H3H103 as seed ortholog is 100%.

Group of orthologs #1903. Best score 75 bits
Score difference with first non-orthologous sequence - C.immitis:75 P.ramorum:75

J0HHS5              	100.00%		H3G589              	100.00%
Bootstrap support for J0HHS5 as seed ortholog is 100%.
Bootstrap support for H3G589 as seed ortholog is 100%.

Group of orthologs #1904. Best score 75 bits
Score difference with first non-orthologous sequence - C.immitis:75 P.ramorum:75

J3KCE0              	100.00%		H3GCL5              	100.00%
Bootstrap support for J3KCE0 as seed ortholog is 100%.
Bootstrap support for H3GCL5 as seed ortholog is 100%.

Group of orthologs #1905. Best score 75 bits
Score difference with first non-orthologous sequence - C.immitis:75 P.ramorum:75

J3K6W2              	100.00%		H3GKA5              	100.00%
Bootstrap support for J3K6W2 as seed ortholog is 100%.
Bootstrap support for H3GKA5 as seed ortholog is 100%.

Group of orthologs #1906. Best score 75 bits
Score difference with first non-orthologous sequence - C.immitis:75 P.ramorum:75

J3KH65              	100.00%		H3GI68              	100.00%
Bootstrap support for J3KH65 as seed ortholog is 100%.
Bootstrap support for H3GI68 as seed ortholog is 100%.

Group of orthologs #1907. Best score 75 bits
Score difference with first non-orthologous sequence - C.immitis:75 P.ramorum:75

J3KL81              	100.00%		H3GWE3              	100.00%
Bootstrap support for J3KL81 as seed ortholog is 100%.
Bootstrap support for H3GWE3 as seed ortholog is 100%.

Group of orthologs #1908. Best score 75 bits
Score difference with first non-orthologous sequence - C.immitis:75 P.ramorum:75

J3KEA3              	100.00%		H3HAV3              	100.00%
Bootstrap support for J3KEA3 as seed ortholog is 100%.
Bootstrap support for H3HAV3 as seed ortholog is 100%.

Group of orthologs #1909. Best score 75 bits
Score difference with first non-orthologous sequence - C.immitis:75 P.ramorum:75

J3KDI8              	100.00%		H3HDS1              	100.00%
Bootstrap support for J3KDI8 as seed ortholog is 100%.
Bootstrap support for H3HDS1 as seed ortholog is 100%.

Group of orthologs #1910. Best score 74 bits
Score difference with first non-orthologous sequence - C.immitis:74 P.ramorum:74

J3KD12              	100.00%		H3GGS5              	100.00%
                    	       		H3GIY1              	20.96%
Bootstrap support for J3KD12 as seed ortholog is 100%.
Bootstrap support for H3GGS5 as seed ortholog is 100%.

Group of orthologs #1911. Best score 74 bits
Score difference with first non-orthologous sequence - C.immitis:30 P.ramorum:74

J3KL92              	100.00%		H3GE87              	100.00%
                    	       		H3H346              	5.65%
Bootstrap support for J3KL92 as seed ortholog is 73%.
Alternative seed ortholog is J3KER7 (30 bits away from this cluster)
Bootstrap support for H3GE87 as seed ortholog is 100%.

Group of orthologs #1912. Best score 74 bits
Score difference with first non-orthologous sequence - C.immitis:74 P.ramorum:74

J3KJA8              	100.00%		H3H6J8              	100.00%
                    	       		H3GUQ9              	99.61%
Bootstrap support for J3KJA8 as seed ortholog is 100%.
Bootstrap support for H3H6J8 as seed ortholog is 100%.

Group of orthologs #1913. Best score 74 bits
Score difference with first non-orthologous sequence - C.immitis:74 P.ramorum:74

J3K446              	100.00%		H3G4Y3              	100.00%
Bootstrap support for J3K446 as seed ortholog is 100%.
Bootstrap support for H3G4Y3 as seed ortholog is 100%.

Group of orthologs #1914. Best score 74 bits
Score difference with first non-orthologous sequence - C.immitis:74 P.ramorum:74

J0HDL4              	100.00%		H3GTE9              	100.00%
Bootstrap support for J0HDL4 as seed ortholog is 100%.
Bootstrap support for H3GTE9 as seed ortholog is 100%.

Group of orthologs #1915. Best score 74 bits
Score difference with first non-orthologous sequence - C.immitis:74 P.ramorum:74

J3K3L6              	100.00%		H3GP29              	100.00%
Bootstrap support for J3K3L6 as seed ortholog is 100%.
Bootstrap support for H3GP29 as seed ortholog is 100%.

Group of orthologs #1916. Best score 74 bits
Score difference with first non-orthologous sequence - C.immitis:74 P.ramorum:74

J3K8D8              	100.00%		H3GR17              	100.00%
Bootstrap support for J3K8D8 as seed ortholog is 100%.
Bootstrap support for H3GR17 as seed ortholog is 100%.

Group of orthologs #1917. Best score 74 bits
Score difference with first non-orthologous sequence - C.immitis:74 P.ramorum:74

J3K4L1              	100.00%		H3GVA1              	100.00%
Bootstrap support for J3K4L1 as seed ortholog is 100%.
Bootstrap support for H3GVA1 as seed ortholog is 100%.

Group of orthologs #1918. Best score 74 bits
Score difference with first non-orthologous sequence - C.immitis:74 P.ramorum:74

J3KLX9              	100.00%		H3GRT9              	100.00%
Bootstrap support for J3KLX9 as seed ortholog is 100%.
Bootstrap support for H3GRT9 as seed ortholog is 100%.

Group of orthologs #1919. Best score 74 bits
Score difference with first non-orthologous sequence - C.immitis:74 P.ramorum:74

J3KFE8              	100.00%		H3H7V5              	100.00%
Bootstrap support for J3KFE8 as seed ortholog is 100%.
Bootstrap support for H3H7V5 as seed ortholog is 100%.

Group of orthologs #1920. Best score 74 bits
Score difference with first non-orthologous sequence - C.immitis:74 P.ramorum:74

J3KLR4              	100.00%		H3HCS3              	100.00%
Bootstrap support for J3KLR4 as seed ortholog is 100%.
Bootstrap support for H3HCS3 as seed ortholog is 100%.

Group of orthologs #1921. Best score 73 bits
Score difference with first non-orthologous sequence - C.immitis:73 P.ramorum:73

J3K2C2              	100.00%		H3HE21              	100.00%
                    	       		H3GBN1              	6.52%
Bootstrap support for J3K2C2 as seed ortholog is 100%.
Bootstrap support for H3HE21 as seed ortholog is 100%.

Group of orthologs #1922. Best score 73 bits
Score difference with first non-orthologous sequence - C.immitis:73 P.ramorum:73

I9XL36              	100.00%		H3G7D6              	100.00%
Bootstrap support for I9XL36 as seed ortholog is 100%.
Bootstrap support for H3G7D6 as seed ortholog is 100%.

Group of orthologs #1923. Best score 73 bits
Score difference with first non-orthologous sequence - C.immitis:73 P.ramorum:26

J3K0H8              	100.00%		H3G8Q9              	100.00%
Bootstrap support for J3K0H8 as seed ortholog is 100%.
Bootstrap support for H3G8Q9 as seed ortholog is 98%.

Group of orthologs #1924. Best score 73 bits
Score difference with first non-orthologous sequence - C.immitis:73 P.ramorum:5

J0HE36              	100.00%		H3GCF5              	100.00%
Bootstrap support for J0HE36 as seed ortholog is 100%.
Bootstrap support for H3GCF5 as seed ortholog is 66%.
Alternative seed ortholog is H3HAR8 (5 bits away from this cluster)

Group of orthologs #1925. Best score 73 bits
Score difference with first non-orthologous sequence - C.immitis:73 P.ramorum:73

J3K658              	100.00%		H3G8P7              	100.00%
Bootstrap support for J3K658 as seed ortholog is 100%.
Bootstrap support for H3G8P7 as seed ortholog is 100%.

Group of orthologs #1926. Best score 73 bits
Score difference with first non-orthologous sequence - C.immitis:73 P.ramorum:73

J3K6W4              	100.00%		H3G990              	100.00%
Bootstrap support for J3K6W4 as seed ortholog is 100%.
Bootstrap support for H3G990 as seed ortholog is 100%.

Group of orthologs #1927. Best score 73 bits
Score difference with first non-orthologous sequence - C.immitis:73 P.ramorum:73

J3KJ36              	100.00%		H3GES7              	100.00%
Bootstrap support for J3KJ36 as seed ortholog is 100%.
Bootstrap support for H3GES7 as seed ortholog is 100%.

Group of orthologs #1928. Best score 73 bits
Score difference with first non-orthologous sequence - C.immitis:73 P.ramorum:73

J3KJH6              	100.00%		H3GJP6              	100.00%
Bootstrap support for J3KJH6 as seed ortholog is 100%.
Bootstrap support for H3GJP6 as seed ortholog is 100%.

Group of orthologs #1929. Best score 73 bits
Score difference with first non-orthologous sequence - C.immitis:73 P.ramorum:73

J3KHV6              	100.00%		H3GS93              	100.00%
Bootstrap support for J3KHV6 as seed ortholog is 100%.
Bootstrap support for H3GS93 as seed ortholog is 100%.

Group of orthologs #1930. Best score 73 bits
Score difference with first non-orthologous sequence - C.immitis:9 P.ramorum:8

J3K7W4              	100.00%		H3H3F1              	100.00%
Bootstrap support for J3K7W4 as seed ortholog is 63%.
Alternative seed ortholog is J3K856 (9 bits away from this cluster)
Bootstrap support for H3H3F1 as seed ortholog is 64%.
Alternative seed ortholog is H3GZJ9 (8 bits away from this cluster)

Group of orthologs #1931. Best score 73 bits
Score difference with first non-orthologous sequence - C.immitis:73 P.ramorum:73

J3KHX6              	100.00%		H3GX10              	100.00%
Bootstrap support for J3KHX6 as seed ortholog is 100%.
Bootstrap support for H3GX10 as seed ortholog is 100%.

Group of orthologs #1932. Best score 73 bits
Score difference with first non-orthologous sequence - C.immitis:73 P.ramorum:73

J3K761              	100.00%		H3HAY7              	100.00%
Bootstrap support for J3K761 as seed ortholog is 100%.
Bootstrap support for H3HAY7 as seed ortholog is 100%.

Group of orthologs #1933. Best score 72 bits
Score difference with first non-orthologous sequence - C.immitis:72 P.ramorum:24

J3K6T8              	100.00%		H3GQU7              	100.00%
J3K3C5              	29.85%		H3GQU8              	49.88%
J3K8A6              	24.47%		
Bootstrap support for J3K6T8 as seed ortholog is 100%.
Bootstrap support for H3GQU7 as seed ortholog is 76%.

Group of orthologs #1934. Best score 72 bits
Score difference with first non-orthologous sequence - C.immitis:72 P.ramorum:3

J0HDH1              	100.00%		H3GE81              	100.00%
                    	       		H3H727              	66.26%
Bootstrap support for J0HDH1 as seed ortholog is 100%.
Bootstrap support for H3GE81 as seed ortholog is 48%.
Alternative seed ortholog is H3GDT5 (3 bits away from this cluster)

Group of orthologs #1935. Best score 72 bits
Score difference with first non-orthologous sequence - C.immitis:72 P.ramorum:6

I9XN31              	100.00%		H3H1E8              	100.00%
                    	       		H3GBT3              	54.79%
Bootstrap support for I9XN31 as seed ortholog is 100%.
Bootstrap support for H3H1E8 as seed ortholog is 69%.
Alternative seed ortholog is H3H2N0 (6 bits away from this cluster)

Group of orthologs #1936. Best score 72 bits
Score difference with first non-orthologous sequence - C.immitis:72 P.ramorum:72

Q1E7Y1              	100.00%		H3GPK3              	100.00%
                    	       		H3GPK5              	43.51%
Bootstrap support for Q1E7Y1 as seed ortholog is 100%.
Bootstrap support for H3GPK3 as seed ortholog is 100%.

Group of orthologs #1937. Best score 72 bits
Score difference with first non-orthologous sequence - C.immitis:72 P.ramorum:72

J3K4J8              	100.00%		H3G7Y8              	100.00%
Bootstrap support for J3K4J8 as seed ortholog is 100%.
Bootstrap support for H3G7Y8 as seed ortholog is 100%.

Group of orthologs #1938. Best score 72 bits
Score difference with first non-orthologous sequence - C.immitis:72 P.ramorum:72

J3KFH8              	100.00%		H3G6K1              	100.00%
Bootstrap support for J3KFH8 as seed ortholog is 100%.
Bootstrap support for H3G6K1 as seed ortholog is 100%.

Group of orthologs #1939. Best score 72 bits
Score difference with first non-orthologous sequence - C.immitis:72 P.ramorum:72

J3KAH4              	100.00%		H3GPN6              	100.00%
Bootstrap support for J3KAH4 as seed ortholog is 100%.
Bootstrap support for H3GPN6 as seed ortholog is 100%.

Group of orthologs #1940. Best score 72 bits
Score difference with first non-orthologous sequence - C.immitis:72 P.ramorum:72

Q1DTR6              	100.00%		H3GD40              	100.00%
Bootstrap support for Q1DTR6 as seed ortholog is 100%.
Bootstrap support for H3GD40 as seed ortholog is 100%.

Group of orthologs #1941. Best score 72 bits
Score difference with first non-orthologous sequence - C.immitis:72 P.ramorum:72

J3KI58              	100.00%		H3GXJ1              	100.00%
Bootstrap support for J3KI58 as seed ortholog is 100%.
Bootstrap support for H3GXJ1 as seed ortholog is 100%.

Group of orthologs #1942. Best score 71 bits
Score difference with first non-orthologous sequence - C.immitis:71 P.ramorum:71

J3KJJ3              	100.00%		H3H4D2              	100.00%
                    	       		H3GW94              	86.35%
Bootstrap support for J3KJJ3 as seed ortholog is 100%.
Bootstrap support for H3H4D2 as seed ortholog is 100%.

Group of orthologs #1943. Best score 71 bits
Score difference with first non-orthologous sequence - C.immitis:71 P.ramorum:71

J3KHA3              	100.00%		H3HAU8              	100.00%
                    	       		H3GDK5              	9.76%
Bootstrap support for J3KHA3 as seed ortholog is 100%.
Bootstrap support for H3HAU8 as seed ortholog is 100%.

Group of orthologs #1944. Best score 71 bits
Score difference with first non-orthologous sequence - C.immitis:71 P.ramorum:71

J3KID7              	100.00%		H3GAA3              	100.00%
Bootstrap support for J3KID7 as seed ortholog is 100%.
Bootstrap support for H3GAA3 as seed ortholog is 100%.

Group of orthologs #1945. Best score 71 bits
Score difference with first non-orthologous sequence - C.immitis:71 P.ramorum:71

J3KCG9              	100.00%		H3GI65              	100.00%
Bootstrap support for J3KCG9 as seed ortholog is 100%.
Bootstrap support for H3GI65 as seed ortholog is 100%.

Group of orthologs #1946. Best score 71 bits
Score difference with first non-orthologous sequence - C.immitis:71 P.ramorum:71

J3KHZ2              	100.00%		H3GI69              	100.00%
Bootstrap support for J3KHZ2 as seed ortholog is 100%.
Bootstrap support for H3GI69 as seed ortholog is 100%.

Group of orthologs #1947. Best score 71 bits
Score difference with first non-orthologous sequence - C.immitis:71 P.ramorum:71

J3K6B0              	100.00%		H3GWK0              	100.00%
Bootstrap support for J3K6B0 as seed ortholog is 100%.
Bootstrap support for H3GWK0 as seed ortholog is 100%.

Group of orthologs #1948. Best score 71 bits
Score difference with first non-orthologous sequence - C.immitis:71 P.ramorum:71

J3K4K6              	100.00%		H3H394              	100.00%
Bootstrap support for J3K4K6 as seed ortholog is 100%.
Bootstrap support for H3H394 as seed ortholog is 100%.

Group of orthologs #1949. Best score 71 bits
Score difference with first non-orthologous sequence - C.immitis:71 P.ramorum:71

J3KBU8              	100.00%		H3HBA1              	100.00%
Bootstrap support for J3KBU8 as seed ortholog is 100%.
Bootstrap support for H3HBA1 as seed ortholog is 100%.

Group of orthologs #1950. Best score 70 bits
Score difference with first non-orthologous sequence - C.immitis:70 P.ramorum:70

J3K0Q2              	100.00%		H3GGY1              	100.00%
Bootstrap support for J3K0Q2 as seed ortholog is 100%.
Bootstrap support for H3GGY1 as seed ortholog is 100%.

Group of orthologs #1951. Best score 70 bits
Score difference with first non-orthologous sequence - C.immitis:70 P.ramorum:70

J3KAW9              	100.00%		H3G825              	100.00%
Bootstrap support for J3KAW9 as seed ortholog is 100%.
Bootstrap support for H3G825 as seed ortholog is 100%.

Group of orthologs #1952. Best score 70 bits
Score difference with first non-orthologous sequence - C.immitis:70 P.ramorum:70

J3KAI5              	100.00%		H3GH26              	100.00%
Bootstrap support for J3KAI5 as seed ortholog is 100%.
Bootstrap support for H3GH26 as seed ortholog is 100%.

Group of orthologs #1953. Best score 70 bits
Score difference with first non-orthologous sequence - C.immitis:70 P.ramorum:70

J3KLN5              	100.00%		H3GDP4              	100.00%
Bootstrap support for J3KLN5 as seed ortholog is 100%.
Bootstrap support for H3GDP4 as seed ortholog is 100%.

Group of orthologs #1954. Best score 70 bits
Score difference with first non-orthologous sequence - C.immitis:70 P.ramorum:70

I9XM46              	100.00%		H3H2J2              	100.00%
Bootstrap support for I9XM46 as seed ortholog is 100%.
Bootstrap support for H3H2J2 as seed ortholog is 100%.

Group of orthologs #1955. Best score 70 bits
Score difference with first non-orthologous sequence - C.immitis:70 P.ramorum:70

J3K4U1              	100.00%		H3H1I1              	100.00%
Bootstrap support for J3K4U1 as seed ortholog is 100%.
Bootstrap support for H3H1I1 as seed ortholog is 100%.

Group of orthologs #1956. Best score 70 bits
Score difference with first non-orthologous sequence - C.immitis:70 P.ramorum:70

J3KCI4              	100.00%		H3H0Q5              	100.00%
Bootstrap support for J3KCI4 as seed ortholog is 100%.
Bootstrap support for H3H0Q5 as seed ortholog is 100%.

Group of orthologs #1957. Best score 70 bits
Score difference with first non-orthologous sequence - C.immitis:70 P.ramorum:70

J3KH04              	100.00%		H3H2I1              	100.00%
Bootstrap support for J3KH04 as seed ortholog is 100%.
Bootstrap support for H3H2I1 as seed ortholog is 100%.

Group of orthologs #1958. Best score 69 bits
Score difference with first non-orthologous sequence - C.immitis:69 P.ramorum:69

J3KGX9              	100.00%		H3G781              	100.00%
Bootstrap support for J3KGX9 as seed ortholog is 100%.
Bootstrap support for H3G781 as seed ortholog is 100%.

Group of orthologs #1959. Best score 69 bits
Score difference with first non-orthologous sequence - C.immitis:69 P.ramorum:69

J3K3Q4              	100.00%		H3H2G6              	100.00%
Bootstrap support for J3K3Q4 as seed ortholog is 100%.
Bootstrap support for H3H2G6 as seed ortholog is 100%.

Group of orthologs #1960. Best score 69 bits
Score difference with first non-orthologous sequence - C.immitis:69 P.ramorum:69

J3KIR4              	100.00%		H3H3B6              	100.00%
Bootstrap support for J3KIR4 as seed ortholog is 100%.
Bootstrap support for H3H3B6 as seed ortholog is 100%.

Group of orthologs #1961. Best score 68 bits
Score difference with first non-orthologous sequence - C.immitis:68 P.ramorum:68

J3K6V4              	100.00%		H3GIU4              	100.00%
                    	       		H3GIU5              	99.12%
                    	       		H3GIU2              	35.56%
                    	       		H3GIV6              	33.17%
                    	       		H3GIV5              	32.79%
                    	       		H3GIU0              	29.00%
                    	       		H3GIU3              	27.24%
                    	       		H3GUL6              	10.59%
Bootstrap support for J3K6V4 as seed ortholog is 100%.
Bootstrap support for H3GIU4 as seed ortholog is 100%.

Group of orthologs #1962. Best score 68 bits
Score difference with first non-orthologous sequence - C.immitis:68 P.ramorum:68

J3KH91              	100.00%		H3GGP1              	100.00%
                    	       		H3G6R5              	75.91%
                    	       		H3G9E7              	74.79%
                    	       		H3GP95              	69.75%
Bootstrap support for J3KH91 as seed ortholog is 100%.
Bootstrap support for H3GGP1 as seed ortholog is 100%.

Group of orthologs #1963. Best score 68 bits
Score difference with first non-orthologous sequence - C.immitis:68 P.ramorum:68

J3KI55              	100.00%		H3H0U5              	100.00%
                    	       		H3H3D2              	52.50%
Bootstrap support for J3KI55 as seed ortholog is 100%.
Bootstrap support for H3H0U5 as seed ortholog is 100%.

Group of orthologs #1964. Best score 68 bits
Score difference with first non-orthologous sequence - C.immitis:68 P.ramorum:68

J3K0B5              	100.00%		H3GH47              	100.00%
Bootstrap support for J3K0B5 as seed ortholog is 100%.
Bootstrap support for H3GH47 as seed ortholog is 100%.

Group of orthologs #1965. Best score 68 bits
Score difference with first non-orthologous sequence - C.immitis:68 P.ramorum:68

J3KD25              	100.00%		H3G545              	100.00%
Bootstrap support for J3KD25 as seed ortholog is 100%.
Bootstrap support for H3G545 as seed ortholog is 100%.

Group of orthologs #1966. Best score 68 bits
Score difference with first non-orthologous sequence - C.immitis:68 P.ramorum:68

J3K824              	100.00%		H3GFP6              	100.00%
Bootstrap support for J3K824 as seed ortholog is 100%.
Bootstrap support for H3GFP6 as seed ortholog is 100%.

Group of orthologs #1967. Best score 68 bits
Score difference with first non-orthologous sequence - C.immitis:68 P.ramorum:68

J3K2W4              	100.00%		H3GM96              	100.00%
Bootstrap support for J3K2W4 as seed ortholog is 100%.
Bootstrap support for H3GM96 as seed ortholog is 100%.

Group of orthologs #1968. Best score 68 bits
Score difference with first non-orthologous sequence - C.immitis:68 P.ramorum:68

J3KHK8              	100.00%		H3GR70              	100.00%
Bootstrap support for J3KHK8 as seed ortholog is 100%.
Bootstrap support for H3GR70 as seed ortholog is 100%.

Group of orthologs #1969. Best score 67 bits
Score difference with first non-orthologous sequence - C.immitis:67 P.ramorum:67

J0HEZ2              	100.00%		H3GH39              	100.00%
                    	       		H3H988              	77.27%
Bootstrap support for J0HEZ2 as seed ortholog is 100%.
Bootstrap support for H3GH39 as seed ortholog is 100%.

Group of orthologs #1970. Best score 67 bits
Score difference with first non-orthologous sequence - C.immitis:67 P.ramorum:67

J3K6F0              	100.00%		H3GQU4              	100.00%
                    	       		H3GEI5              	13.67%
Bootstrap support for J3K6F0 as seed ortholog is 100%.
Bootstrap support for H3GQU4 as seed ortholog is 100%.

Group of orthologs #1971. Best score 67 bits
Score difference with first non-orthologous sequence - C.immitis:67 P.ramorum:67

J3KGL3              	100.00%		H3GT49              	100.00%
J3K193              	17.67%		
Bootstrap support for J3KGL3 as seed ortholog is 100%.
Bootstrap support for H3GT49 as seed ortholog is 100%.

Group of orthologs #1972. Best score 67 bits
Score difference with first non-orthologous sequence - C.immitis:67 P.ramorum:67

J3K1D9              	100.00%		H3GH49              	100.00%
Bootstrap support for J3K1D9 as seed ortholog is 100%.
Bootstrap support for H3GH49 as seed ortholog is 100%.

Group of orthologs #1973. Best score 67 bits
Score difference with first non-orthologous sequence - C.immitis:67 P.ramorum:67

J3K4P0              	100.00%		H3GHD5              	100.00%
Bootstrap support for J3K4P0 as seed ortholog is 100%.
Bootstrap support for H3GHD5 as seed ortholog is 100%.

Group of orthologs #1974. Best score 67 bits
Score difference with first non-orthologous sequence - C.immitis:67 P.ramorum:67

J3K6E5              	100.00%		H3GSF4              	100.00%
Bootstrap support for J3K6E5 as seed ortholog is 100%.
Bootstrap support for H3GSF4 as seed ortholog is 100%.

Group of orthologs #1975. Best score 67 bits
Score difference with first non-orthologous sequence - C.immitis:67 P.ramorum:67

J3K4T0              	100.00%		H3GYI8              	100.00%
Bootstrap support for J3K4T0 as seed ortholog is 100%.
Bootstrap support for H3GYI8 as seed ortholog is 100%.

Group of orthologs #1976. Best score 67 bits
Score difference with first non-orthologous sequence - C.immitis:67 P.ramorum:67

J3KGS1              	100.00%		H3GR00              	100.00%
Bootstrap support for J3KGS1 as seed ortholog is 100%.
Bootstrap support for H3GR00 as seed ortholog is 100%.

Group of orthologs #1977. Best score 67 bits
Score difference with first non-orthologous sequence - C.immitis:67 P.ramorum:67

J3KD00              	100.00%		H3H7R0              	100.00%
Bootstrap support for J3KD00 as seed ortholog is 100%.
Bootstrap support for H3H7R0 as seed ortholog is 100%.

Group of orthologs #1978. Best score 67 bits
Score difference with first non-orthologous sequence - C.immitis:67 P.ramorum:67

Q1DNY1              	100.00%		H3H255              	100.00%
Bootstrap support for Q1DNY1 as seed ortholog is 100%.
Bootstrap support for H3H255 as seed ortholog is 100%.

Group of orthologs #1979. Best score 66 bits
Score difference with first non-orthologous sequence - C.immitis:66 P.ramorum:66

J3K1Y3              	100.00%		H3GSF5              	100.00%
J3K468              	5.49%		
Bootstrap support for J3K1Y3 as seed ortholog is 100%.
Bootstrap support for H3GSF5 as seed ortholog is 100%.

Group of orthologs #1980. Best score 66 bits
Score difference with first non-orthologous sequence - C.immitis:66 P.ramorum:66

J3K1Y4              	100.00%		H3GGU8              	100.00%
Bootstrap support for J3K1Y4 as seed ortholog is 100%.
Bootstrap support for H3GGU8 as seed ortholog is 100%.

Group of orthologs #1981. Best score 66 bits
Score difference with first non-orthologous sequence - C.immitis:66 P.ramorum:66

J3K2P3              	100.00%		H3GGZ6              	100.00%
Bootstrap support for J3K2P3 as seed ortholog is 100%.
Bootstrap support for H3GGZ6 as seed ortholog is 100%.

Group of orthologs #1982. Best score 66 bits
Score difference with first non-orthologous sequence - C.immitis:66 P.ramorum:66

J3KBG5              	100.00%		H3GMH5              	100.00%
Bootstrap support for J3KBG5 as seed ortholog is 100%.
Bootstrap support for H3GMH5 as seed ortholog is 100%.

Group of orthologs #1983. Best score 66 bits
Score difference with first non-orthologous sequence - C.immitis:66 P.ramorum:66

J3KH09              	100.00%		H3H421              	100.00%
Bootstrap support for J3KH09 as seed ortholog is 100%.
Bootstrap support for H3H421 as seed ortholog is 100%.

Group of orthologs #1984. Best score 66 bits
Score difference with first non-orthologous sequence - C.immitis:66 P.ramorum:66

J3KMG0              	100.00%		H3GZB6              	100.00%
Bootstrap support for J3KMG0 as seed ortholog is 100%.
Bootstrap support for H3GZB6 as seed ortholog is 100%.

Group of orthologs #1985. Best score 65 bits
Score difference with first non-orthologous sequence - C.immitis:65 P.ramorum:65

J3K4J6              	100.00%		H3G550              	100.00%
Bootstrap support for J3K4J6 as seed ortholog is 100%.
Bootstrap support for H3G550 as seed ortholog is 100%.

Group of orthologs #1986. Best score 65 bits
Score difference with first non-orthologous sequence - C.immitis:65 P.ramorum:65

J3K1W6              	100.00%		H3GM39              	100.00%
Bootstrap support for J3K1W6 as seed ortholog is 100%.
Bootstrap support for H3GM39 as seed ortholog is 100%.

Group of orthologs #1987. Best score 65 bits
Score difference with first non-orthologous sequence - C.immitis:65 P.ramorum:65

J3KBE6              	100.00%		H3GFZ1              	100.00%
Bootstrap support for J3KBE6 as seed ortholog is 100%.
Bootstrap support for H3GFZ1 as seed ortholog is 100%.

Group of orthologs #1988. Best score 65 bits
Score difference with first non-orthologous sequence - C.immitis:65 P.ramorum:65

J3K4B9              	100.00%		H3GQ94              	100.00%
Bootstrap support for J3K4B9 as seed ortholog is 100%.
Bootstrap support for H3GQ94 as seed ortholog is 100%.

Group of orthologs #1989. Best score 65 bits
Score difference with first non-orthologous sequence - C.immitis:65 P.ramorum:65

J3KB38              	100.00%		H3GYH4              	100.00%
Bootstrap support for J3KB38 as seed ortholog is 100%.
Bootstrap support for H3GYH4 as seed ortholog is 100%.

Group of orthologs #1990. Best score 65 bits
Score difference with first non-orthologous sequence - C.immitis:65 P.ramorum:65

Q1E6D3              	100.00%		H3GXI5              	100.00%
Bootstrap support for Q1E6D3 as seed ortholog is 100%.
Bootstrap support for H3GXI5 as seed ortholog is 100%.

Group of orthologs #1991. Best score 65 bits
Score difference with first non-orthologous sequence - C.immitis:65 P.ramorum:65

J3KA07              	100.00%		H3HE08              	100.00%
Bootstrap support for J3KA07 as seed ortholog is 100%.
Bootstrap support for H3HE08 as seed ortholog is 100%.

Group of orthologs #1992. Best score 64 bits
Score difference with first non-orthologous sequence - C.immitis:64 P.ramorum:64

J3KLB6              	100.00%		H3GSH5              	100.00%
                    	       		H3GMI4              	35.84%
                    	       		H3GMI5              	33.80%
                    	       		H3H0J0              	29.72%
Bootstrap support for J3KLB6 as seed ortholog is 100%.
Bootstrap support for H3GSH5 as seed ortholog is 100%.

Group of orthologs #1993. Best score 64 bits
Score difference with first non-orthologous sequence - C.immitis:64 P.ramorum:64

J3K649              	100.00%		H3GJZ8              	100.00%
J3K812              	45.45%		
Bootstrap support for J3K649 as seed ortholog is 100%.
Bootstrap support for H3GJZ8 as seed ortholog is 100%.

Group of orthologs #1994. Best score 64 bits
Score difference with first non-orthologous sequence - C.immitis:64 P.ramorum:64

J0HE66              	100.00%		H3G511              	100.00%
Bootstrap support for J0HE66 as seed ortholog is 100%.
Bootstrap support for H3G511 as seed ortholog is 100%.

Group of orthologs #1995. Best score 64 bits
Score difference with first non-orthologous sequence - C.immitis:64 P.ramorum:64

J3K9Y6              	100.00%		H3GID5              	100.00%
Bootstrap support for J3K9Y6 as seed ortholog is 100%.
Bootstrap support for H3GID5 as seed ortholog is 100%.

Group of orthologs #1996. Best score 64 bits
Score difference with first non-orthologous sequence - C.immitis:64 P.ramorum:64

J3KM34              	100.00%		H3GXK3              	100.00%
Bootstrap support for J3KM34 as seed ortholog is 100%.
Bootstrap support for H3GXK3 as seed ortholog is 100%.

Group of orthologs #1997. Best score 64 bits
Score difference with first non-orthologous sequence - C.immitis:64 P.ramorum:64

J3K9L1              	100.00%		H3HE45              	100.00%
Bootstrap support for J3K9L1 as seed ortholog is 100%.
Bootstrap support for H3HE45 as seed ortholog is 100%.

Group of orthologs #1998. Best score 63 bits
Score difference with first non-orthologous sequence - C.immitis:63 P.ramorum:63

J3KLR6              	100.00%		H3GBR8              	100.00%
Bootstrap support for J3KLR6 as seed ortholog is 100%.
Bootstrap support for H3GBR8 as seed ortholog is 100%.

Group of orthologs #1999. Best score 63 bits
Score difference with first non-orthologous sequence - C.immitis:63 P.ramorum:63

J3K5B0              	100.00%		H3GUZ8              	100.00%
Bootstrap support for J3K5B0 as seed ortholog is 100%.
Bootstrap support for H3GUZ8 as seed ortholog is 100%.

Group of orthologs #2000. Best score 63 bits
Score difference with first non-orthologous sequence - C.immitis:63 P.ramorum:63

J3K330              	100.00%		H3HBD4              	100.00%
Bootstrap support for J3K330 as seed ortholog is 100%.
Bootstrap support for H3HBD4 as seed ortholog is 100%.

Group of orthologs #2001. Best score 63 bits
Score difference with first non-orthologous sequence - C.immitis:6 P.ramorum:63

J3KD09              	100.00%		H3H3U9              	100.00%
Bootstrap support for J3KD09 as seed ortholog is 53%.
Alternative seed ortholog is J3K0J4 (6 bits away from this cluster)
Bootstrap support for H3H3U9 as seed ortholog is 100%.

Group of orthologs #2002. Best score 62 bits
Score difference with first non-orthologous sequence - C.immitis:62 P.ramorum:62

J3KFY7              	100.00%		H3GY93              	100.00%
                    	       		H3GWV7              	19.20%
                    	       		H3GVY5              	5.02%
Bootstrap support for J3KFY7 as seed ortholog is 100%.
Bootstrap support for H3GY93 as seed ortholog is 100%.

Group of orthologs #2003. Best score 62 bits
Score difference with first non-orthologous sequence - C.immitis:62 P.ramorum:62

J3K2V9              	100.00%		H3GH20              	100.00%
Bootstrap support for J3K2V9 as seed ortholog is 100%.
Bootstrap support for H3GH20 as seed ortholog is 100%.

Group of orthologs #2004. Best score 62 bits
Score difference with first non-orthologous sequence - C.immitis:62 P.ramorum:9

J3K8Z9              	100.00%		H3GJ89              	100.00%
Bootstrap support for J3K8Z9 as seed ortholog is 100%.
Bootstrap support for H3GJ89 as seed ortholog is 71%.
Alternative seed ortholog is H3H2J6 (9 bits away from this cluster)

Group of orthologs #2005. Best score 62 bits
Score difference with first non-orthologous sequence - C.immitis:62 P.ramorum:62

J3K0W2              	100.00%		H3GXD4              	100.00%
Bootstrap support for J3K0W2 as seed ortholog is 100%.
Bootstrap support for H3GXD4 as seed ortholog is 100%.

Group of orthologs #2006. Best score 62 bits
Score difference with first non-orthologous sequence - C.immitis:62 P.ramorum:62

J3K4A0              	100.00%		H3GYM3              	100.00%
Bootstrap support for J3K4A0 as seed ortholog is 100%.
Bootstrap support for H3GYM3 as seed ortholog is 100%.

Group of orthologs #2007. Best score 62 bits
Score difference with first non-orthologous sequence - C.immitis:62 P.ramorum:62

J3K473              	100.00%		H3H420              	100.00%
Bootstrap support for J3K473 as seed ortholog is 100%.
Bootstrap support for H3H420 as seed ortholog is 100%.

Group of orthologs #2008. Best score 62 bits
Score difference with first non-orthologous sequence - C.immitis:62 P.ramorum:62

J3K547              	100.00%		H3HAQ1              	100.00%
Bootstrap support for J3K547 as seed ortholog is 100%.
Bootstrap support for H3HAQ1 as seed ortholog is 100%.

Group of orthologs #2009. Best score 61 bits
Score difference with first non-orthologous sequence - C.immitis:61 P.ramorum:61

J3K3H2              	100.00%		H3G7D7              	100.00%
Bootstrap support for J3K3H2 as seed ortholog is 100%.
Bootstrap support for H3G7D7 as seed ortholog is 100%.

Group of orthologs #2010. Best score 61 bits
Score difference with first non-orthologous sequence - C.immitis:61 P.ramorum:61

J3KJ46              	100.00%		H3G672              	100.00%
Bootstrap support for J3KJ46 as seed ortholog is 100%.
Bootstrap support for H3G672 as seed ortholog is 100%.

Group of orthologs #2011. Best score 61 bits
Score difference with first non-orthologous sequence - C.immitis:61 P.ramorum:61

J3KG62              	100.00%		H3GFK0              	100.00%
Bootstrap support for J3KG62 as seed ortholog is 100%.
Bootstrap support for H3GFK0 as seed ortholog is 100%.

Group of orthologs #2012. Best score 61 bits
Score difference with first non-orthologous sequence - C.immitis:61 P.ramorum:61

J3K7T8              	100.00%		H3GP02              	100.00%
Bootstrap support for J3K7T8 as seed ortholog is 100%.
Bootstrap support for H3GP02 as seed ortholog is 100%.

Group of orthologs #2013. Best score 61 bits
Score difference with first non-orthologous sequence - C.immitis:61 P.ramorum:61

Q1E0G9              	100.00%		H3GQV2              	100.00%
Bootstrap support for Q1E0G9 as seed ortholog is 100%.
Bootstrap support for H3GQV2 as seed ortholog is 100%.

Group of orthologs #2014. Best score 61 bits
Score difference with first non-orthologous sequence - C.immitis:61 P.ramorum:61

J3K689              	100.00%		H3HA24              	100.00%
Bootstrap support for J3K689 as seed ortholog is 100%.
Bootstrap support for H3HA24 as seed ortholog is 100%.

Group of orthologs #2015. Best score 60 bits
Score difference with first non-orthologous sequence - C.immitis:60 P.ramorum:60

J3KDR4              	100.00%		H3GK33              	100.00%
Bootstrap support for J3KDR4 as seed ortholog is 100%.
Bootstrap support for H3GK33 as seed ortholog is 100%.

Group of orthologs #2016. Best score 60 bits
Score difference with first non-orthologous sequence - C.immitis:60 P.ramorum:60

J3K4L2              	100.00%		H3GV84              	100.00%
Bootstrap support for J3K4L2 as seed ortholog is 100%.
Bootstrap support for H3GV84 as seed ortholog is 100%.

Group of orthologs #2017. Best score 60 bits
Score difference with first non-orthologous sequence - C.immitis:60 P.ramorum:60

I9NPG0              	100.00%		H3HD35              	100.00%
Bootstrap support for I9NPG0 as seed ortholog is 100%.
Bootstrap support for H3HD35 as seed ortholog is 100%.

Group of orthologs #2018. Best score 60 bits
Score difference with first non-orthologous sequence - C.immitis:60 P.ramorum:10

J3KG68              	100.00%		H3H418              	100.00%
Bootstrap support for J3KG68 as seed ortholog is 100%.
Bootstrap support for H3H418 as seed ortholog is 63%.
Alternative seed ortholog is H3GHF4 (10 bits away from this cluster)

Group of orthologs #2019. Best score 60 bits
Score difference with first non-orthologous sequence - C.immitis:60 P.ramorum:60

J3KBX3              	100.00%		H3HAQ8              	100.00%
Bootstrap support for J3KBX3 as seed ortholog is 100%.
Bootstrap support for H3HAQ8 as seed ortholog is 100%.

Group of orthologs #2020. Best score 59 bits
Score difference with first non-orthologous sequence - C.immitis:59 P.ramorum:59

J3K663              	100.00%		H3G7X5              	100.00%
Bootstrap support for J3K663 as seed ortholog is 100%.
Bootstrap support for H3G7X5 as seed ortholog is 100%.

Group of orthologs #2021. Best score 59 bits
Score difference with first non-orthologous sequence - C.immitis:59 P.ramorum:59

J3K261              	100.00%		H3GJ28              	100.00%
Bootstrap support for J3K261 as seed ortholog is 100%.
Bootstrap support for H3GJ28 as seed ortholog is 100%.

Group of orthologs #2022. Best score 59 bits
Score difference with first non-orthologous sequence - C.immitis:59 P.ramorum:59

J3KF14              	100.00%		H3GD79              	100.00%
Bootstrap support for J3KF14 as seed ortholog is 100%.
Bootstrap support for H3GD79 as seed ortholog is 100%.

Group of orthologs #2023. Best score 59 bits
Score difference with first non-orthologous sequence - C.immitis:59 P.ramorum:59

J3KF95              	100.00%		H3GMB9              	100.00%
Bootstrap support for J3KF95 as seed ortholog is 100%.
Bootstrap support for H3GMB9 as seed ortholog is 100%.

Group of orthologs #2024. Best score 59 bits
Score difference with first non-orthologous sequence - C.immitis:59 P.ramorum:59

J3KL18              	100.00%		H3GH69              	100.00%
Bootstrap support for J3KL18 as seed ortholog is 100%.
Bootstrap support for H3GH69 as seed ortholog is 100%.

Group of orthologs #2025. Best score 59 bits
Score difference with first non-orthologous sequence - C.immitis:59 P.ramorum:59

J3KCX8              	100.00%		H3H1I5              	100.00%
Bootstrap support for J3KCX8 as seed ortholog is 100%.
Bootstrap support for H3H1I5 as seed ortholog is 100%.

Group of orthologs #2026. Best score 58 bits
Score difference with first non-orthologous sequence - C.immitis:58 P.ramorum:58

J3K7P3              	100.00%		H3GES2              	100.00%
J3K7D7              	100.00%		H3GLD0              	100.00%
I9NMB0              	100.00%		H3GY34              	100.00%
J3KEL5              	8.36%		H3GLD2              	76.24%
                    	       		H3GLD1              	63.12%
                    	       		H3GY37              	52.71%
                    	       		H3GY33              	43.53%
                    	       		H3HE13              	41.45%
                    	       		H3H0K7              	31.43%
                    	       		H3H4B4              	31.29%
Bootstrap support for J3K7P3 as seed ortholog is 100%.
Bootstrap support for J3K7D7 as seed ortholog is 100%.
Bootstrap support for I9NMB0 as seed ortholog is 100%.
Bootstrap support for H3GES2 as seed ortholog is 100%.
Bootstrap support for H3GLD0 as seed ortholog is 100%.
Bootstrap support for H3GY34 as seed ortholog is 100%.

Group of orthologs #2027. Best score 58 bits
Score difference with first non-orthologous sequence - C.immitis:58 P.ramorum:58

J3K4F5              	100.00%		H3GCT0              	100.00%
Bootstrap support for J3K4F5 as seed ortholog is 100%.
Bootstrap support for H3GCT0 as seed ortholog is 100%.

Group of orthologs #2028. Best score 58 bits
Score difference with first non-orthologous sequence - C.immitis:58 P.ramorum:58

J3KK73              	100.00%		H3G8W9              	100.00%
Bootstrap support for J3KK73 as seed ortholog is 100%.
Bootstrap support for H3G8W9 as seed ortholog is 100%.

Group of orthologs #2029. Best score 58 bits
Score difference with first non-orthologous sequence - C.immitis:58 P.ramorum:58

J3KBY0              	100.00%		H3GHZ9              	100.00%
Bootstrap support for J3KBY0 as seed ortholog is 100%.
Bootstrap support for H3GHZ9 as seed ortholog is 100%.

Group of orthologs #2030. Best score 58 bits
Score difference with first non-orthologous sequence - C.immitis:58 P.ramorum:58

J3KHL1              	100.00%		H3H1H4              	100.00%
Bootstrap support for J3KHL1 as seed ortholog is 100%.
Bootstrap support for H3H1H4 as seed ortholog is 100%.

Group of orthologs #2031. Best score 57 bits
Score difference with first non-orthologous sequence - C.immitis:57 P.ramorum:57

J3KFQ9              	100.00%		H3GLS7              	100.00%
Q1E3R8              	43.54%		
J3KCK2              	37.17%		
J3KEN4              	11.72%		
Bootstrap support for J3KFQ9 as seed ortholog is 100%.
Bootstrap support for H3GLS7 as seed ortholog is 100%.

Group of orthologs #2032. Best score 57 bits
Score difference with first non-orthologous sequence - C.immitis:57 P.ramorum:57

J3KI14              	100.00%		H3GBW9              	100.00%
                    	       		H3GBX0              	56.54%
Bootstrap support for J3KI14 as seed ortholog is 100%.
Bootstrap support for H3GBW9 as seed ortholog is 100%.

Group of orthologs #2033. Best score 57 bits
Score difference with first non-orthologous sequence - C.immitis:57 P.ramorum:57

J3KJ96              	100.00%		H3H6U7              	100.00%
                    	       		H3H7V4              	100.00%
Bootstrap support for J3KJ96 as seed ortholog is 100%.
Bootstrap support for H3H6U7 as seed ortholog is 100%.
Bootstrap support for H3H7V4 as seed ortholog is 100%.

Group of orthologs #2034. Best score 57 bits
Score difference with first non-orthologous sequence - C.immitis:57 P.ramorum:57

J3K1C5              	100.00%		H3G9A4              	100.00%
Bootstrap support for J3K1C5 as seed ortholog is 100%.
Bootstrap support for H3G9A4 as seed ortholog is 100%.

Group of orthologs #2035. Best score 57 bits
Score difference with first non-orthologous sequence - C.immitis:57 P.ramorum:57

I9XM19              	100.00%		H3GM67              	100.00%
Bootstrap support for I9XM19 as seed ortholog is 100%.
Bootstrap support for H3GM67 as seed ortholog is 100%.

Group of orthologs #2036. Best score 57 bits
Score difference with first non-orthologous sequence - C.immitis:57 P.ramorum:57

J3K6X9              	100.00%		H3GEY7              	100.00%
Bootstrap support for J3K6X9 as seed ortholog is 100%.
Bootstrap support for H3GEY7 as seed ortholog is 100%.

Group of orthologs #2037. Best score 57 bits
Score difference with first non-orthologous sequence - C.immitis:57 P.ramorum:57

J3KDA0              	100.00%		H3GM18              	100.00%
Bootstrap support for J3KDA0 as seed ortholog is 100%.
Bootstrap support for H3GM18 as seed ortholog is 100%.

Group of orthologs #2038. Best score 57 bits
Score difference with first non-orthologous sequence - C.immitis:57 P.ramorum:57

J3KEC5              	100.00%		H3GVL2              	100.00%
Bootstrap support for J3KEC5 as seed ortholog is 100%.
Bootstrap support for H3GVL2 as seed ortholog is 100%.

Group of orthologs #2039. Best score 56 bits
Score difference with first non-orthologous sequence - C.immitis:56 P.ramorum:56

I9NS90              	100.00%		H3G8Q8              	100.00%
J3K131              	100.00%		H3G5Z7              	100.00%
                    	       		H3GHH0              	58.70%
Bootstrap support for I9NS90 as seed ortholog is 100%.
Bootstrap support for J3K131 as seed ortholog is 100%.
Bootstrap support for H3G8Q8 as seed ortholog is 100%.
Bootstrap support for H3G5Z7 as seed ortholog is 100%.

Group of orthologs #2040. Best score 56 bits
Score difference with first non-orthologous sequence - C.immitis:56 P.ramorum:56

J3K672              	100.00%		H3GHH4              	100.00%
Bootstrap support for J3K672 as seed ortholog is 100%.
Bootstrap support for H3GHH4 as seed ortholog is 100%.

Group of orthologs #2041. Best score 56 bits
Score difference with first non-orthologous sequence - C.immitis:56 P.ramorum:56

J3KMA7              	100.00%		H3G9T6              	100.00%
Bootstrap support for J3KMA7 as seed ortholog is 100%.
Bootstrap support for H3G9T6 as seed ortholog is 100%.

Group of orthologs #2042. Best score 56 bits
Score difference with first non-orthologous sequence - C.immitis:56 P.ramorum:56

J3K5W8              	100.00%		H3GT99              	100.00%
Bootstrap support for J3K5W8 as seed ortholog is 100%.
Bootstrap support for H3GT99 as seed ortholog is 100%.

Group of orthologs #2043. Best score 55 bits
Score difference with first non-orthologous sequence - C.immitis:55 P.ramorum:55

J3K8N0              	100.00%		H3H117              	100.00%
Bootstrap support for J3K8N0 as seed ortholog is 100%.
Bootstrap support for H3H117 as seed ortholog is 100%.

Group of orthologs #2044. Best score 55 bits
Score difference with first non-orthologous sequence - C.immitis:55 P.ramorum:55

J3KJU1              	100.00%		H3HDA4              	100.00%
Bootstrap support for J3KJU1 as seed ortholog is 100%.
Bootstrap support for H3HDA4 as seed ortholog is 100%.

Group of orthologs #2045. Best score 54 bits
Score difference with first non-orthologous sequence - C.immitis:54 P.ramorum:54

J3K130              	100.00%		H3GPS0              	100.00%
                    	       		H3H5Y9              	100.00%
                    	       		H3H5Y8              	76.86%
                    	       		H3GPS3              	70.23%
                    	       		H3GPS1              	60.66%
                    	       		H3GPS2              	59.83%
Bootstrap support for J3K130 as seed ortholog is 100%.
Bootstrap support for H3GPS0 as seed ortholog is 100%.
Bootstrap support for H3H5Y9 as seed ortholog is 100%.

Group of orthologs #2046. Best score 54 bits
Score difference with first non-orthologous sequence - C.immitis:54 P.ramorum:54

J3K1Z3              	100.00%		H3GUJ7              	100.00%
                    	       		H3GUJ5              	55.29%
                    	       		H3GUK1              	37.26%
                    	       		H3H2T1              	21.39%
Bootstrap support for J3K1Z3 as seed ortholog is 100%.
Bootstrap support for H3GUJ7 as seed ortholog is 100%.

Group of orthologs #2047. Best score 54 bits
Score difference with first non-orthologous sequence - C.immitis:54 P.ramorum:54

J3KDT0              	100.00%		H3G918              	100.00%
J3KE70              	5.23%		
Bootstrap support for J3KDT0 as seed ortholog is 100%.
Bootstrap support for H3G918 as seed ortholog is 100%.

Group of orthologs #2048. Best score 54 bits
Score difference with first non-orthologous sequence - C.immitis:54 P.ramorum:54

J0HI07              	100.00%		H3G634              	100.00%
Bootstrap support for J0HI07 as seed ortholog is 100%.
Bootstrap support for H3G634 as seed ortholog is 100%.

Group of orthologs #2049. Best score 54 bits
Score difference with first non-orthologous sequence - C.immitis:54 P.ramorum:54

J3K313              	100.00%		H3G9A2              	100.00%
Bootstrap support for J3K313 as seed ortholog is 100%.
Bootstrap support for H3G9A2 as seed ortholog is 100%.

Group of orthologs #2050. Best score 54 bits
Score difference with first non-orthologous sequence - C.immitis:54 P.ramorum:54

J3K1J9              	100.00%		H3GZ47              	100.00%
Bootstrap support for J3K1J9 as seed ortholog is 100%.
Bootstrap support for H3GZ47 as seed ortholog is 100%.

Group of orthologs #2051. Best score 53 bits
Score difference with first non-orthologous sequence - C.immitis:53 P.ramorum:53

I9NNW5              	100.00%		H3GFH3              	100.00%
Bootstrap support for I9NNW5 as seed ortholog is 100%.
Bootstrap support for H3GFH3 as seed ortholog is 100%.

Group of orthologs #2052. Best score 53 bits
Score difference with first non-orthologous sequence - C.immitis:53 P.ramorum:53

J3K085              	100.00%		H3GIG2              	100.00%
Bootstrap support for J3K085 as seed ortholog is 100%.
Bootstrap support for H3GIG2 as seed ortholog is 100%.

Group of orthologs #2053. Best score 53 bits
Score difference with first non-orthologous sequence - C.immitis:53 P.ramorum:53

J3KC55              	100.00%		H3GBJ2              	100.00%
Bootstrap support for J3KC55 as seed ortholog is 100%.
Bootstrap support for H3GBJ2 as seed ortholog is 100%.

Group of orthologs #2054. Best score 53 bits
Score difference with first non-orthologous sequence - C.immitis:53 P.ramorum:53

Q1E891              	100.00%		H3H0L8              	100.00%
Bootstrap support for Q1E891 as seed ortholog is 100%.
Bootstrap support for H3H0L8 as seed ortholog is 100%.

Group of orthologs #2055. Best score 52 bits
Score difference with first non-orthologous sequence - C.immitis:3 P.ramorum:52

J3KCF2              	100.00%		H3GXC3              	100.00%
J3KHU0              	18.75%		H3H341              	82.48%
                    	       		H3HEB8              	82.21%
                    	       		H3H342              	67.92%
                    	       		H3H328              	44.47%
                    	       		H3H329              	42.59%
                    	       		H3GU46              	16.71%
Bootstrap support for J3KCF2 as seed ortholog is 56%.
Alternative seed ortholog is J3KG94 (3 bits away from this cluster)
Bootstrap support for H3GXC3 as seed ortholog is 100%.

Group of orthologs #2056. Best score 52 bits
Score difference with first non-orthologous sequence - C.immitis:52 P.ramorum:52

J3K9L6              	100.00%		H3GG79              	100.00%
                    	       		H3HE88              	57.39%
Bootstrap support for J3K9L6 as seed ortholog is 100%.
Bootstrap support for H3GG79 as seed ortholog is 100%.

Group of orthologs #2057. Best score 52 bits
Score difference with first non-orthologous sequence - C.immitis:52 P.ramorum:52

J3K4S8              	100.00%		H3H1H2              	100.00%
Bootstrap support for J3K4S8 as seed ortholog is 100%.
Bootstrap support for H3H1H2 as seed ortholog is 100%.

Group of orthologs #2058. Best score 52 bits
Score difference with first non-orthologous sequence - C.immitis:52 P.ramorum:8

J3KEM3              	100.00%		H3GWA4              	100.00%
Bootstrap support for J3KEM3 as seed ortholog is 100%.
Bootstrap support for H3GWA4 as seed ortholog is 60%.
Alternative seed ortholog is H3GBQ4 (8 bits away from this cluster)

Group of orthologs #2059. Best score 52 bits
Score difference with first non-orthologous sequence - C.immitis:52 P.ramorum:52

J3K5S9              	100.00%		H3H5A6              	100.00%
Bootstrap support for J3K5S9 as seed ortholog is 100%.
Bootstrap support for H3H5A6 as seed ortholog is 100%.

Group of orthologs #2060. Best score 52 bits
Score difference with first non-orthologous sequence - C.immitis:52 P.ramorum:52

J3KD48              	100.00%		H3H5A8              	100.00%
Bootstrap support for J3KD48 as seed ortholog is 100%.
Bootstrap support for H3H5A8 as seed ortholog is 100%.

Group of orthologs #2061. Best score 52 bits
Score difference with first non-orthologous sequence - C.immitis:52 P.ramorum:52

J3KLR0              	100.00%		H3HB80              	100.00%
Bootstrap support for J3KLR0 as seed ortholog is 100%.
Bootstrap support for H3HB80 as seed ortholog is 100%.

Group of orthologs #2062. Best score 51 bits
Score difference with first non-orthologous sequence - C.immitis:51 P.ramorum:51

I9NSY3              	100.00%		H3GCI8              	100.00%
J3K3V5              	25.45%		H3GPM3              	30.90%
                    	       		H3GPM1              	29.85%
                    	       		H3GPM2              	29.56%
                    	       		H3GPM4              	26.39%
                    	       		H3GFA7              	24.38%
                    	       		H3GR62              	23.22%
                    	       		H3GFA6              	21.40%
                    	       		H3HCH2              	19.39%
                    	       		H3GI94              	9.98%
Bootstrap support for I9NSY3 as seed ortholog is 100%.
Bootstrap support for H3GCI8 as seed ortholog is 100%.

Group of orthologs #2063. Best score 51 bits
Score difference with first non-orthologous sequence - C.immitis:51 P.ramorum:51

J3KKW8              	100.00%		H3GQ48              	100.00%
                    	       		H3GTV7              	20.44%
Bootstrap support for J3KKW8 as seed ortholog is 100%.
Bootstrap support for H3GQ48 as seed ortholog is 100%.

Group of orthologs #2064. Best score 51 bits
Score difference with first non-orthologous sequence - C.immitis:51 P.ramorum:51

J3K5E4              	100.00%		H3GGF3              	100.00%
Bootstrap support for J3K5E4 as seed ortholog is 100%.
Bootstrap support for H3GGF3 as seed ortholog is 100%.

Group of orthologs #2065. Best score 51 bits
Score difference with first non-orthologous sequence - C.immitis:51 P.ramorum:51

J3KIQ0              	100.00%		H3GIC8              	100.00%
Bootstrap support for J3KIQ0 as seed ortholog is 100%.
Bootstrap support for H3GIC8 as seed ortholog is 100%.

Group of orthologs #2066. Best score 51 bits
Score difference with first non-orthologous sequence - C.immitis:51 P.ramorum:51

J3KK47              	100.00%		H3GT07              	100.00%
Bootstrap support for J3KK47 as seed ortholog is 100%.
Bootstrap support for H3GT07 as seed ortholog is 100%.

Group of orthologs #2067. Best score 50 bits
Score difference with first non-orthologous sequence - C.immitis:50 P.ramorum:50

J3K0Y9              	100.00%		H3H1G0              	100.00%
                    	       		H3H8P9              	79.22%
                    	       		H3GDE0              	51.64%
                    	       		H3GBB5              	12.59%
                    	       		H3GCT7              	11.96%
                    	       		H3GD73              	9.45%
                    	       		H3HB18              	9.32%
                    	       		H3GD72              	8.94%
                    	       		H3HB19              	7.18%
Bootstrap support for J3K0Y9 as seed ortholog is 100%.
Bootstrap support for H3H1G0 as seed ortholog is 100%.

Group of orthologs #2068. Best score 50 bits
Score difference with first non-orthologous sequence - C.immitis:50 P.ramorum:50

J0HFI1              	100.00%		H3GY99              	100.00%
J3K559              	13.11%		H3GYA0              	100.00%
                    	       		H3GF87              	85.00%
                    	       		H3GY95              	73.20%
Bootstrap support for J0HFI1 as seed ortholog is 100%.
Bootstrap support for H3GY99 as seed ortholog is 100%.
Bootstrap support for H3GYA0 as seed ortholog is 100%.

Group of orthologs #2069. Best score 50 bits
Score difference with first non-orthologous sequence - C.immitis:50 P.ramorum:50

J3KEN3              	100.00%		H3HCS2              	100.00%
                    	       		H3GS20              	32.78%
Bootstrap support for J3KEN3 as seed ortholog is 100%.
Bootstrap support for H3HCS2 as seed ortholog is 100%.

Group of orthologs #2070. Best score 50 bits
Score difference with first non-orthologous sequence - C.immitis:50 P.ramorum:50

J3K3H0              	100.00%		H3GBD4              	100.00%
Bootstrap support for J3K3H0 as seed ortholog is 100%.
Bootstrap support for H3GBD4 as seed ortholog is 100%.

Group of orthologs #2071. Best score 50 bits
Score difference with first non-orthologous sequence - C.immitis:50 P.ramorum:50

J3KHD9              	100.00%		H3GED1              	100.00%
Bootstrap support for J3KHD9 as seed ortholog is 100%.
Bootstrap support for H3GED1 as seed ortholog is 100%.

Group of orthologs #2072. Best score 50 bits
Score difference with first non-orthologous sequence - C.immitis:50 P.ramorum:50

Q1E146              	100.00%		H3GBU9              	100.00%
Bootstrap support for Q1E146 as seed ortholog is 100%.
Bootstrap support for H3GBU9 as seed ortholog is 100%.

Group of orthologs #2073. Best score 50 bits
Score difference with first non-orthologous sequence - C.immitis:50 P.ramorum:50

J3K305              	100.00%		H3GYH0              	100.00%
Bootstrap support for J3K305 as seed ortholog is 100%.
Bootstrap support for H3GYH0 as seed ortholog is 100%.

Group of orthologs #2074. Best score 50 bits
Score difference with first non-orthologous sequence - C.immitis:50 P.ramorum:50

J3KHP0              	100.00%		H3GUD0              	100.00%
Bootstrap support for J3KHP0 as seed ortholog is 100%.
Bootstrap support for H3GUD0 as seed ortholog is 100%.

Group of orthologs #2075. Best score 49 bits
Score difference with first non-orthologous sequence - C.immitis:49 P.ramorum:49

I9XJT5              	100.00%		H3HDH0              	100.00%
J3KC08              	7.89%		H3GHI1              	11.98%
                    	       		H3GVG5              	11.27%
                    	       		H3H6B0              	11.27%
                    	       		H3GJ01              	11.17%
                    	       		H3GC06              	7.51%
                    	       		H3HCA8              	7.41%
                    	       		H3HAH9              	7.21%
                    	       		H3H397              	6.60%
                    	       		H3HD37              	6.60%
                    	       		H3GTX9              	6.09%
                    	       		H3GVC7              	5.89%
                    	       		H3GT23              	5.58%
                    	       		H3GXX4              	5.28%
Bootstrap support for I9XJT5 as seed ortholog is 100%.
Bootstrap support for H3HDH0 as seed ortholog is 100%.

Group of orthologs #2076. Best score 49 bits
Score difference with first non-orthologous sequence - C.immitis:49 P.ramorum:49

J3K210              	100.00%		H3GPB0              	100.00%
Bootstrap support for J3K210 as seed ortholog is 100%.
Bootstrap support for H3GPB0 as seed ortholog is 100%.

Group of orthologs #2077. Best score 49 bits
Score difference with first non-orthologous sequence - C.immitis:49 P.ramorum:49

J3K1E3              	100.00%		H3H2R7              	100.00%
Bootstrap support for J3K1E3 as seed ortholog is 100%.
Bootstrap support for H3H2R7 as seed ortholog is 100%.

Group of orthologs #2078. Best score 49 bits
Score difference with first non-orthologous sequence - C.immitis:49 P.ramorum:49

J3KMC7              	100.00%		H3GMX3              	100.00%
Bootstrap support for J3KMC7 as seed ortholog is 100%.
Bootstrap support for H3GMX3 as seed ortholog is 100%.

Group of orthologs #2079. Best score 48 bits
Score difference with first non-orthologous sequence - C.immitis:48 P.ramorum:48

J3K895              	100.00%		H3G8U6              	100.00%
Bootstrap support for J3K895 as seed ortholog is 100%.
Bootstrap support for H3G8U6 as seed ortholog is 100%.

Group of orthologs #2080. Best score 48 bits
Score difference with first non-orthologous sequence - C.immitis:48 P.ramorum:48

J3KDJ2              	100.00%		H3G5D0              	100.00%
Bootstrap support for J3KDJ2 as seed ortholog is 100%.
Bootstrap support for H3G5D0 as seed ortholog is 100%.

Group of orthologs #2081. Best score 48 bits
Score difference with first non-orthologous sequence - C.immitis:48 P.ramorum:48

J3KES9              	100.00%		H3G5F7              	100.00%
Bootstrap support for J3KES9 as seed ortholog is 100%.
Bootstrap support for H3G5F7 as seed ortholog is 100%.

Group of orthologs #2082. Best score 48 bits
Score difference with first non-orthologous sequence - C.immitis:48 P.ramorum:48

J3KCD8              	100.00%		H3GBG7              	100.00%
Bootstrap support for J3KCD8 as seed ortholog is 100%.
Bootstrap support for H3GBG7 as seed ortholog is 100%.

Group of orthologs #2083. Best score 48 bits
Score difference with first non-orthologous sequence - C.immitis:48 P.ramorum:48

J3KFZ8              	100.00%		H3GY71              	100.00%
Bootstrap support for J3KFZ8 as seed ortholog is 100%.
Bootstrap support for H3GY71 as seed ortholog is 100%.

Group of orthologs #2084. Best score 48 bits
Score difference with first non-orthologous sequence - C.immitis:48 P.ramorum:48

J3KEQ9              	100.00%		H3HBK0              	100.00%
Bootstrap support for J3KEQ9 as seed ortholog is 100%.
Bootstrap support for H3HBK0 as seed ortholog is 100%.

Group of orthologs #2085. Best score 48 bits
Score difference with first non-orthologous sequence - C.immitis:48 P.ramorum:48

J3KGL2              	100.00%		H3HCC9              	100.00%
Bootstrap support for J3KGL2 as seed ortholog is 100%.
Bootstrap support for H3HCC9 as seed ortholog is 100%.

Group of orthologs #2086. Best score 47 bits
Score difference with first non-orthologous sequence - C.immitis:47 P.ramorum:47

J3KLI7              	100.00%		H3GCY2              	100.00%
                    	       		H3GIY7              	42.48%
Bootstrap support for J3KLI7 as seed ortholog is 100%.
Bootstrap support for H3GCY2 as seed ortholog is 100%.

Group of orthologs #2087. Best score 47 bits
Score difference with first non-orthologous sequence - C.immitis:47 P.ramorum:47

J3K5J3              	100.00%		H3GED9              	100.00%
Bootstrap support for J3K5J3 as seed ortholog is 100%.
Bootstrap support for H3GED9 as seed ortholog is 100%.

Group of orthologs #2088. Best score 47 bits
Score difference with first non-orthologous sequence - C.immitis:47 P.ramorum:47

J3KK25              	100.00%		H3H2V2              	100.00%
Bootstrap support for J3KK25 as seed ortholog is 100%.
Bootstrap support for H3H2V2 as seed ortholog is 100%.

Group of orthologs #2089. Best score 46 bits
Score difference with first non-orthologous sequence - C.immitis:46 P.ramorum:46

J3KDM6              	100.00%		H3GVS9              	100.00%
                    	       		H3HAN1              	8.05%
                    	       		H3HDX8              	7.05%
Bootstrap support for J3KDM6 as seed ortholog is 100%.
Bootstrap support for H3GVS9 as seed ortholog is 100%.

Group of orthologs #2090. Best score 46 bits
Score difference with first non-orthologous sequence - C.immitis:46 P.ramorum:46

J0HEZ0              	100.00%		H3GS60              	100.00%
Bootstrap support for J0HEZ0 as seed ortholog is 100%.
Bootstrap support for H3GS60 as seed ortholog is 100%.

Group of orthologs #2091. Best score 45 bits
Score difference with first non-orthologous sequence - C.immitis:45 P.ramorum:45

J3K2Y4              	100.00%		H3H545              	100.00%
                    	       		H3H7S0              	97.75%
                    	       		H3H544              	18.41%
                    	       		H3GVA0              	13.38%
                    	       		H3GNE7              	12.19%
                    	       		H3HCC8              	10.73%
                    	       		H3HCH8              	7.42%
Bootstrap support for J3K2Y4 as seed ortholog is 100%.
Bootstrap support for H3H545 as seed ortholog is 100%.

Group of orthologs #2092. Best score 45 bits
Score difference with first non-orthologous sequence - C.immitis:45 P.ramorum:45

I9NL72              	100.00%		H3GIM4              	100.00%
Bootstrap support for I9NL72 as seed ortholog is 100%.
Bootstrap support for H3GIM4 as seed ortholog is 100%.

Group of orthologs #2093. Best score 45 bits
Score difference with first non-orthologous sequence - C.immitis:45 P.ramorum:45

J3K651              	100.00%		H3GET2              	100.00%
Bootstrap support for J3K651 as seed ortholog is 100%.
Bootstrap support for H3GET2 as seed ortholog is 100%.

Group of orthologs #2094. Best score 45 bits
Score difference with first non-orthologous sequence - C.immitis:45 P.ramorum:45

J3K7M4              	100.00%		H3GQD6              	100.00%
Bootstrap support for J3K7M4 as seed ortholog is 100%.
Bootstrap support for H3GQD6 as seed ortholog is 100%.

Group of orthologs #2095. Best score 44 bits
Score difference with first non-orthologous sequence - C.immitis:44 P.ramorum:44

I9NPE4              	100.00%		H3GMS1              	100.00%
                    	       		H3GJP1              	5.18%
Bootstrap support for I9NPE4 as seed ortholog is 100%.
Bootstrap support for H3GMS1 as seed ortholog is 100%.

Group of orthologs #2096. Best score 44 bits
Score difference with first non-orthologous sequence - C.immitis:44 P.ramorum:44

J3K7B8              	100.00%		H3G8D3              	100.00%
Bootstrap support for J3K7B8 as seed ortholog is 100%.
Bootstrap support for H3G8D3 as seed ortholog is 100%.

Group of orthologs #2097. Best score 44 bits
Score difference with first non-orthologous sequence - C.immitis:44 P.ramorum:44

Q1E3Z7              	100.00%		H3GGT7              	100.00%
Bootstrap support for Q1E3Z7 as seed ortholog is 100%.
Bootstrap support for H3GGT7 as seed ortholog is 100%.

Group of orthologs #2098. Best score 44 bits
Score difference with first non-orthologous sequence - C.immitis:44 P.ramorum:44

J3KHG8              	100.00%		H3GWL6              	100.00%
Bootstrap support for J3KHG8 as seed ortholog is 100%.
Bootstrap support for H3GWL6 as seed ortholog is 100%.

Group of orthologs #2099. Best score 44 bits
Score difference with first non-orthologous sequence - C.immitis:44 P.ramorum:44

J3K666              	100.00%		H3HD06              	100.00%
Bootstrap support for J3K666 as seed ortholog is 100%.
Bootstrap support for H3HD06 as seed ortholog is 100%.

Group of orthologs #2100. Best score 44 bits
Score difference with first non-orthologous sequence - C.immitis:44 P.ramorum:44

J3KIX3              	100.00%		H3HEF9              	100.00%
Bootstrap support for J3KIX3 as seed ortholog is 100%.
Bootstrap support for H3HEF9 as seed ortholog is 100%.

Group of orthologs #2101. Best score 43 bits
Score difference with first non-orthologous sequence - C.immitis:43 P.ramorum:43

J3K093              	100.00%		H3GSG9              	100.00%
Bootstrap support for J3K093 as seed ortholog is 100%.
Bootstrap support for H3GSG9 as seed ortholog is 100%.

Group of orthologs #2102. Best score 43 bits
Score difference with first non-orthologous sequence - C.immitis:43 P.ramorum:43

J3K3L8              	100.00%		H3HCB0              	100.00%
Bootstrap support for J3K3L8 as seed ortholog is 100%.
Bootstrap support for H3HCB0 as seed ortholog is 100%.

Group of orthologs #2103. Best score 42 bits
Score difference with first non-orthologous sequence - C.immitis:42 P.ramorum:42

J0HGR6              	100.00%		H3GAD0              	100.00%
                    	       		H3GA23              	66.94%
                    	       		H3HCN4              	6.05%
Bootstrap support for J0HGR6 as seed ortholog is 100%.
Bootstrap support for H3GAD0 as seed ortholog is 100%.

Group of orthologs #2104. Best score 42 bits
Score difference with first non-orthologous sequence - C.immitis:42 P.ramorum:42

J3KGZ5              	100.00%		H3GMC6              	100.00%
Bootstrap support for J3KGZ5 as seed ortholog is 100%.
Bootstrap support for H3GMC6 as seed ortholog is 100%.

Group of orthologs #2105. Best score 42 bits
Score difference with first non-orthologous sequence - C.immitis:42 P.ramorum:42

J3K1C3              	100.00%		H3HCK8              	100.00%
Bootstrap support for J3K1C3 as seed ortholog is 100%.
Bootstrap support for H3HCK8 as seed ortholog is 100%.

Group of orthologs #2106. Best score 41 bits
Score difference with first non-orthologous sequence - C.immitis:41 P.ramorum:41

J0HGJ2              	100.00%		H3GR32              	100.00%
                    	       		H3GC58              	62.31%
                    	       		H3HAS6              	59.91%
Bootstrap support for J0HGJ2 as seed ortholog is 100%.
Bootstrap support for H3GR32 as seed ortholog is 100%.

Group of orthologs #2107. Best score 41 bits
Score difference with first non-orthologous sequence - C.immitis:41 P.ramorum:41

J3KJ38              	100.00%		H3H856              	100.00%
Bootstrap support for J3KJ38 as seed ortholog is 100%.
Bootstrap support for H3H856 as seed ortholog is 100%.

Group of orthologs #2108. Best score 40 bits
Score difference with first non-orthologous sequence - C.immitis:40 P.ramorum:40

J3KJS0              	38.03%		H3GR37              	100.00%
J3K6P9              	100.00%		H3H736              	100.00%
J3KM80              	11.21%		
Bootstrap support for J3K6P9 as seed ortholog is 100%.
Bootstrap support for H3GR37 as seed ortholog is 100%.
Bootstrap support for H3H736 as seed ortholog is 100%.

Group of orthologs #2109. Best score 40 bits
Score difference with first non-orthologous sequence - C.immitis:40 P.ramorum:40

J3KIS6              	100.00%		H3GG53              	100.00%
Bootstrap support for J3KIS6 as seed ortholog is 100%.
Bootstrap support for H3GG53 as seed ortholog is 100%.

Group of orthologs #2110. Best score 40 bits
Score difference with first non-orthologous sequence - C.immitis:40 P.ramorum:40

J3KFN6              	100.00%		H3HBP9              	100.00%
Bootstrap support for J3KFN6 as seed ortholog is 100%.
Bootstrap support for H3HBP9 as seed ortholog is 100%.