###################################
206 groups of orthologs
430 in-paralogs from C.jacchus
217 in-paralogs from C.trachomatis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 883 bits
Score difference with first non-orthologous sequence - C.jacchus:598 C.trachomatis:883

F7HK61              	100.00%		O84022              	100.00%
Bootstrap support for F7HK61 as seed ortholog is 100%.
Bootstrap support for O84022 as seed ortholog is 100%.

Group of orthologs #2. Best score 872 bits
Score difference with first non-orthologous sequence - C.jacchus:872 C.trachomatis:872

F6STU1              	100.00%		O84250              	100.00%
F6S2Y1              	67.50%		
F7IAB4              	52.91%		
Bootstrap support for F6STU1 as seed ortholog is 100%.
Bootstrap support for O84250 as seed ortholog is 100%.

Group of orthologs #3. Best score 712 bits
Score difference with first non-orthologous sequence - C.jacchus:152 C.trachomatis:712

F7EX52              	100.00%		P17821              	100.00%
Bootstrap support for F7EX52 as seed ortholog is 99%.
Bootstrap support for P17821 as seed ortholog is 100%.

Group of orthologs #4. Best score 706 bits
Score difference with first non-orthologous sequence - C.jacchus:248 C.trachomatis:706

F7AST7              	100.00%		O84348              	100.00%
Bootstrap support for F7AST7 as seed ortholog is 100%.
Bootstrap support for O84348 as seed ortholog is 100%.

Group of orthologs #5. Best score 618 bits
Score difference with first non-orthologous sequence - C.jacchus:618 C.trachomatis:618

F7CT55              	100.00%		O84716              	100.00%
F7II67              	46.24%		
Bootstrap support for F7CT55 as seed ortholog is 100%.
Bootstrap support for O84716 as seed ortholog is 100%.

Group of orthologs #6. Best score 587 bits
Score difference with first non-orthologous sequence - C.jacchus:455 C.trachomatis:587

F7IQ52              	100.00%		O84067              	100.00%
Bootstrap support for F7IQ52 as seed ortholog is 100%.
Bootstrap support for O84067 as seed ortholog is 100%.

Group of orthologs #7. Best score 539 bits
Score difference with first non-orthologous sequence - C.jacchus:462 C.trachomatis:350

F6TFZ0              	100.00%		P0C0Z7              	100.00%
F7F8P9              	17.08%		
Bootstrap support for F6TFZ0 as seed ortholog is 100%.
Bootstrap support for P0C0Z7 as seed ortholog is 100%.

Group of orthologs #8. Best score 516 bits
Score difference with first non-orthologous sequence - C.jacchus:45 C.trachomatis:516

F6QKI2              	100.00%		O84444              	100.00%
Bootstrap support for F6QKI2 as seed ortholog is 80%.
Bootstrap support for O84444 as seed ortholog is 100%.

Group of orthologs #9. Best score 514 bits
Score difference with first non-orthologous sequence - C.jacchus:514 C.trachomatis:514

F7EXP4              	100.00%		O84057              	100.00%
F6Z9S0              	66.93%		
Bootstrap support for F7EXP4 as seed ortholog is 100%.
Bootstrap support for O84057 as seed ortholog is 100%.

Group of orthologs #10. Best score 511 bits
Score difference with first non-orthologous sequence - C.jacchus:323 C.trachomatis:511

F7AKT2              	100.00%		O84304              	100.00%
F6SY36              	24.47%		
Bootstrap support for F7AKT2 as seed ortholog is 99%.
Bootstrap support for O84304 as seed ortholog is 100%.

Group of orthologs #11. Best score 500 bits
Score difference with first non-orthologous sequence - C.jacchus:500 C.trachomatis:500

F6ZKF5              	100.00%		O84834              	100.00%
Bootstrap support for F6ZKF5 as seed ortholog is 100%.
Bootstrap support for O84834 as seed ortholog is 100%.

Group of orthologs #12. Best score 481 bits
Score difference with first non-orthologous sequence - C.jacchus:481 C.trachomatis:481

F7G049              	100.00%		O84066              	100.00%
Bootstrap support for F7G049 as seed ortholog is 100%.
Bootstrap support for O84066 as seed ortholog is 100%.

Group of orthologs #13. Best score 478 bits
Score difference with first non-orthologous sequence - C.jacchus:478 C.trachomatis:478

F7IP12              	100.00%		O84863              	100.00%
Bootstrap support for F7IP12 as seed ortholog is 100%.
Bootstrap support for O84863 as seed ortholog is 100%.

Group of orthologs #14. Best score 470 bits
Score difference with first non-orthologous sequence - C.jacchus:470 C.trachomatis:470

F7I8C3              	100.00%		O84585              	100.00%
F7IRD8              	48.93%		
F7FYX6              	29.59%		
Bootstrap support for F7I8C3 as seed ortholog is 100%.
Bootstrap support for O84585 as seed ortholog is 100%.

Group of orthologs #15. Best score 455 bits
Score difference with first non-orthologous sequence - C.jacchus:30 C.trachomatis:455

F7I3C6              	100.00%		O84848              	100.00%
Bootstrap support for F7I3C6 as seed ortholog is 77%.
Bootstrap support for O84848 as seed ortholog is 100%.

Group of orthologs #16. Best score 450 bits
Score difference with first non-orthologous sequence - C.jacchus:286 C.trachomatis:450

F7IMS0              	100.00%		P0CD71              	100.00%
F7IEL8              	5.48%		
Bootstrap support for F7IMS0 as seed ortholog is 100%.
Bootstrap support for P0CD71 as seed ortholog is 100%.

Group of orthologs #17. Best score 447 bits
Score difference with first non-orthologous sequence - C.jacchus:447 C.trachomatis:447

F7HSG9              	100.00%		P0CD73              	100.00%
Bootstrap support for F7HSG9 as seed ortholog is 100%.
Bootstrap support for P0CD73 as seed ortholog is 100%.

Group of orthologs #18. Best score 446 bits
Score difference with first non-orthologous sequence - C.jacchus:446 C.trachomatis:446

F7I4E1              	100.00%		O84754              	100.00%
Bootstrap support for F7I4E1 as seed ortholog is 100%.
Bootstrap support for O84754 as seed ortholog is 100%.

Group of orthologs #19. Best score 440 bits
Score difference with first non-orthologous sequence - C.jacchus:335 C.trachomatis:440

F7ELZ1              	100.00%		O84211              	100.00%
Bootstrap support for F7ELZ1 as seed ortholog is 100%.
Bootstrap support for O84211 as seed ortholog is 100%.

Group of orthologs #20. Best score 436 bits
Score difference with first non-orthologous sequence - C.jacchus:242 C.trachomatis:436

F6WS67              	100.00%		O84460              	100.00%
Bootstrap support for F6WS67 as seed ortholog is 100%.
Bootstrap support for O84460 as seed ortholog is 100%.

Group of orthologs #21. Best score 423 bits
Score difference with first non-orthologous sequence - C.jacchus:423 C.trachomatis:423

F7HS43              	100.00%		Q59321              	100.00%
F7CKK2              	62.28%		
Bootstrap support for F7HS43 as seed ortholog is 100%.
Bootstrap support for Q59321 as seed ortholog is 100%.

Group of orthologs #22. Best score 421 bits
Score difference with first non-orthologous sequence - C.jacchus:421 C.trachomatis:421

F7CWB9              	100.00%		O84126              	100.00%
Bootstrap support for F7CWB9 as seed ortholog is 100%.
Bootstrap support for O84126 as seed ortholog is 100%.

Group of orthologs #23. Best score 414 bits
Score difference with first non-orthologous sequence - C.jacchus:265 C.trachomatis:414

F7HYM1              	100.00%		O84546              	100.00%
Bootstrap support for F7HYM1 as seed ortholog is 100%.
Bootstrap support for O84546 as seed ortholog is 100%.

Group of orthologs #24. Best score 396 bits
Score difference with first non-orthologous sequence - C.jacchus:396 C.trachomatis:396

F7GWJ1              	100.00%		O84849              	100.00%
Bootstrap support for F7GWJ1 as seed ortholog is 100%.
Bootstrap support for O84849 as seed ortholog is 100%.

Group of orthologs #25. Best score 384 bits
Score difference with first non-orthologous sequence - C.jacchus:384 C.trachomatis:239

F7I3H8              	100.00%		O84310              	100.00%
Bootstrap support for F7I3H8 as seed ortholog is 100%.
Bootstrap support for O84310 as seed ortholog is 100%.

Group of orthologs #26. Best score 376 bits
Score difference with first non-orthologous sequence - C.jacchus:248 C.trachomatis:376

F6QLJ3              	100.00%		O84591              	100.00%
F6QLD5              	74.90%		
F7I6Z7              	71.19%		
F7DU78              	70.78%		
F6QFN6              	70.16%		
F6R3U8              	51.44%		
Bootstrap support for F6QLJ3 as seed ortholog is 100%.
Bootstrap support for O84591 as seed ortholog is 100%.

Group of orthologs #27. Best score 374 bits
Score difference with first non-orthologous sequence - C.jacchus:242 C.trachomatis:374

F7GVQ9              	100.00%		O84098              	100.00%
Bootstrap support for F7GVQ9 as seed ortholog is 100%.
Bootstrap support for O84098 as seed ortholog is 100%.

Group of orthologs #28. Best score 364 bits
Score difference with first non-orthologous sequence - C.jacchus:82 C.trachomatis:364

F6U4K4              	100.00%		P0CE13              	100.00%
F7EW37              	16.17%		
F7IC15              	14.89%		
F6UI74              	11.49%		
F7FU01              	10.64%		
F7E1S8              	7.66%		
Bootstrap support for F6U4K4 as seed ortholog is 99%.
Bootstrap support for P0CE13 as seed ortholog is 100%.

Group of orthologs #29. Best score 359 bits
Score difference with first non-orthologous sequence - C.jacchus:359 C.trachomatis:359

F7BVQ5              	100.00%		O84831              	100.00%
Bootstrap support for F7BVQ5 as seed ortholog is 100%.
Bootstrap support for O84831 as seed ortholog is 100%.

Group of orthologs #30. Best score 339 bits
Score difference with first non-orthologous sequence - C.jacchus:339 C.trachomatis:339

F6TA24              	100.00%		O84829              	100.00%
Bootstrap support for F6TA24 as seed ortholog is 100%.
Bootstrap support for O84829 as seed ortholog is 100%.

Group of orthologs #31. Best score 330 bits
Score difference with first non-orthologous sequence - C.jacchus:330 C.trachomatis:330

F7HUD4              	100.00%		O84006              	100.00%
Bootstrap support for F7HUD4 as seed ortholog is 100%.
Bootstrap support for O84006 as seed ortholog is 100%.

Group of orthologs #32. Best score 324 bits
Score difference with first non-orthologous sequence - C.jacchus:251 C.trachomatis:324

F7I4R7              	100.00%		O84786              	100.00%
Bootstrap support for F7I4R7 as seed ortholog is 100%.
Bootstrap support for O84786 as seed ortholog is 100%.

Group of orthologs #33. Best score 318 bits
Score difference with first non-orthologous sequence - C.jacchus:104 C.trachomatis:318

F6T077              	100.00%		O84248              	100.00%
Bootstrap support for F6T077 as seed ortholog is 99%.
Bootstrap support for O84248 as seed ortholog is 100%.

Group of orthologs #34. Best score 313 bits
Score difference with first non-orthologous sequence - C.jacchus:313 C.trachomatis:313

F6RLM6              	100.00%		O84823              	100.00%
F7I1M2              	70.93%		
Bootstrap support for F6RLM6 as seed ortholog is 100%.
Bootstrap support for O84823 as seed ortholog is 100%.

Group of orthologs #35. Best score 310 bits
Score difference with first non-orthologous sequence - C.jacchus:310 C.trachomatis:310

F7FGX4              	100.00%		P0CD78              	100.00%
F7FF70              	82.73%		
F7GGE1              	35.32%		
F7HUJ6              	13.82%		
Bootstrap support for F7FGX4 as seed ortholog is 100%.
Bootstrap support for P0CD78 as seed ortholog is 100%.

Group of orthologs #36. Best score 310 bits
Score difference with first non-orthologous sequence - C.jacchus:310 C.trachomatis:310

F6PQF5              	100.00%		P0CE09              	100.00%
F7G4S4              	22.32%		
Bootstrap support for F6PQF5 as seed ortholog is 100%.
Bootstrap support for P0CE09 as seed ortholog is 100%.

Group of orthologs #37. Best score 310 bits
Score difference with first non-orthologous sequence - C.jacchus:140 C.trachomatis:310

F7GNE6              	100.00%		O84561              	100.00%
Bootstrap support for F7GNE6 as seed ortholog is 99%.
Bootstrap support for O84561 as seed ortholog is 100%.

Group of orthologs #38. Best score 305 bits
Score difference with first non-orthologous sequence - C.jacchus:305 C.trachomatis:305

F6ZA08              	100.00%		P0CE21              	100.00%
F6Q907              	77.49%		
F6QF99              	50.06%		
F7D9E4              	48.38%		
Bootstrap support for F6ZA08 as seed ortholog is 100%.
Bootstrap support for P0CE21 as seed ortholog is 100%.

Group of orthologs #39. Best score 303 bits
Score difference with first non-orthologous sequence - C.jacchus:303 C.trachomatis:303

F6ZY57              	100.00%		O84035              	100.00%
Bootstrap support for F6ZY57 as seed ortholog is 100%.
Bootstrap support for O84035 as seed ortholog is 100%.

Group of orthologs #40. Best score 293 bits
Score difference with first non-orthologous sequence - C.jacchus:293 C.trachomatis:293

F7BSK6              	100.00%		O84698              	100.00%
F7FHM2              	45.12%		
Bootstrap support for F7BSK6 as seed ortholog is 100%.
Bootstrap support for O84698 as seed ortholog is 100%.

Group of orthologs #41. Best score 292 bits
Score difference with first non-orthologous sequence - C.jacchus:292 C.trachomatis:292

F6PH70              	100.00%		O84775              	100.00%
Bootstrap support for F6PH70 as seed ortholog is 100%.
Bootstrap support for O84775 as seed ortholog is 100%.

Group of orthologs #42. Best score 292 bits
Score difference with first non-orthologous sequence - C.jacchus:292 C.trachomatis:292

F6QM88              	100.00%		O84315              	100.00%
Bootstrap support for F6QM88 as seed ortholog is 100%.
Bootstrap support for O84315 as seed ortholog is 100%.

Group of orthologs #43. Best score 290 bits
Score difference with first non-orthologous sequence - C.jacchus:290 C.trachomatis:290

F7IE27              	100.00%		O84451              	100.00%
Bootstrap support for F7IE27 as seed ortholog is 100%.
Bootstrap support for O84451 as seed ortholog is 100%.

Group of orthologs #44. Best score 279 bits
Score difference with first non-orthologous sequence - C.jacchus:279 C.trachomatis:279

F6PY18              	100.00%		O84711              	100.00%
Bootstrap support for F6PY18 as seed ortholog is 100%.
Bootstrap support for O84711 as seed ortholog is 100%.

Group of orthologs #45. Best score 277 bits
Score difference with first non-orthologous sequence - C.jacchus:277 C.trachomatis:277

F6XI89              	100.00%		O84316              	100.00%
F6WHF1              	12.66%		
F7H346              	6.28%		
Bootstrap support for F6XI89 as seed ortholog is 100%.
Bootstrap support for O84316 as seed ortholog is 100%.

Group of orthologs #46. Best score 275 bits
Score difference with first non-orthologous sequence - C.jacchus:275 C.trachomatis:275

F7G994              	100.00%		O84828              	100.00%
F7I5J3              	27.80%		
F7A1W3              	22.04%		
Bootstrap support for F7G994 as seed ortholog is 100%.
Bootstrap support for O84828 as seed ortholog is 100%.

Group of orthologs #47. Best score 275 bits
Score difference with first non-orthologous sequence - C.jacchus:152 C.trachomatis:111

F7HBU9              	100.00%		O84249              	100.00%
Bootstrap support for F7HBU9 as seed ortholog is 99%.
Bootstrap support for O84249 as seed ortholog is 99%.

Group of orthologs #48. Best score 274 bits
Score difference with first non-orthologous sequence - C.jacchus:274 C.trachomatis:274

B0KWT9              	100.00%		O84188              	100.00%
Bootstrap support for B0KWT9 as seed ortholog is 100%.
Bootstrap support for O84188 as seed ortholog is 100%.

Group of orthologs #49. Best score 268 bits
Score difference with first non-orthologous sequence - C.jacchus:268 C.trachomatis:268

F7BW16              	100.00%		O84439              	100.00%
F6XQA6              	37.24%		
Bootstrap support for F7BW16 as seed ortholog is 100%.
Bootstrap support for O84439 as seed ortholog is 100%.

Group of orthologs #50. Best score 265 bits
Score difference with first non-orthologous sequence - C.jacchus:265 C.trachomatis:265

F7IBM8              	100.00%		O84094              	100.00%
Bootstrap support for F7IBM8 as seed ortholog is 100%.
Bootstrap support for O84094 as seed ortholog is 100%.

Group of orthologs #51. Best score 262 bits
Score difference with first non-orthologous sequence - C.jacchus:13 C.trachomatis:262

F7FY54              	100.00%		O84797              	100.00%
Bootstrap support for F7FY54 as seed ortholog is 55%.
Alternative seed ortholog is F7A2G4 (13 bits away from this cluster)
Bootstrap support for O84797 as seed ortholog is 100%.

Group of orthologs #52. Best score 259 bits
Score difference with first non-orthologous sequence - C.jacchus:259 C.trachomatis:259

F7A2V0              	100.00%		P36431              	100.00%
Bootstrap support for F7A2V0 as seed ortholog is 100%.
Bootstrap support for P36431 as seed ortholog is 100%.

Group of orthologs #53. Best score 258 bits
Score difference with first non-orthologous sequence - C.jacchus:258 C.trachomatis:64

F7BQM1              	100.00%		O84026              	100.00%
F7GQR3              	14.40%		
Bootstrap support for F7BQM1 as seed ortholog is 100%.
Bootstrap support for O84026 as seed ortholog is 95%.

Group of orthologs #54. Best score 257 bits
Score difference with first non-orthologous sequence - C.jacchus:138 C.trachomatis:257

F7H699              	100.00%		O84642              	100.00%
F7GYN9              	62.28%		
F7GSG3              	20.00%		
Bootstrap support for F7H699 as seed ortholog is 99%.
Bootstrap support for O84642 as seed ortholog is 100%.

Group of orthologs #55. Best score 257 bits
Score difference with first non-orthologous sequence - C.jacchus:257 C.trachomatis:257

F7D8I5              	100.00%		O84289              	100.00%
Bootstrap support for F7D8I5 as seed ortholog is 100%.
Bootstrap support for O84289 as seed ortholog is 100%.

Group of orthologs #56. Best score 251 bits
Score difference with first non-orthologous sequence - C.jacchus:190 C.trachomatis:132

F7GYR8              	100.00%		O84309              	100.00%
F6ZL40              	79.51%		
F7IBX2              	36.98%		
Bootstrap support for F7GYR8 as seed ortholog is 100%.
Bootstrap support for O84309 as seed ortholog is 99%.

Group of orthologs #57. Best score 251 bits
Score difference with first non-orthologous sequence - C.jacchus:167 C.trachomatis:251

F6Z1F6              	100.00%		O84381              	100.00%
F7IQY7              	74.38%		
Bootstrap support for F6Z1F6 as seed ortholog is 100%.
Bootstrap support for O84381 as seed ortholog is 100%.

Group of orthologs #58. Best score 249 bits
Score difference with first non-orthologous sequence - C.jacchus:132 C.trachomatis:249

F6VH89              	100.00%		O84548              	100.00%
Bootstrap support for F6VH89 as seed ortholog is 99%.
Bootstrap support for O84548 as seed ortholog is 100%.

Group of orthologs #59. Best score 237 bits
Score difference with first non-orthologous sequence - C.jacchus:237 C.trachomatis:237

F6UD41              	100.00%		O84297              	100.00%
F7IMS8              	48.51%		
Bootstrap support for F6UD41 as seed ortholog is 100%.
Bootstrap support for O84297 as seed ortholog is 100%.

Group of orthologs #60. Best score 235 bits
Score difference with first non-orthologous sequence - C.jacchus:114 C.trachomatis:235

F7D4K0              	100.00%		O84352              	100.00%
F7AIH1              	16.85%		
F6YVA2              	16.51%		
Bootstrap support for F7D4K0 as seed ortholog is 99%.
Bootstrap support for O84352 as seed ortholog is 100%.

Group of orthologs #61. Best score 235 bits
Score difference with first non-orthologous sequence - C.jacchus:235 C.trachomatis:235

Q8HXP0              	100.00%		O84296              	100.00%
Bootstrap support for Q8HXP0 as seed ortholog is 100%.
Bootstrap support for O84296 as seed ortholog is 100%.

Group of orthologs #62. Best score 233 bits
Score difference with first non-orthologous sequence - C.jacchus:233 C.trachomatis:233

F7GG88              	100.00%		O84007              	100.00%
Bootstrap support for F7GG88 as seed ortholog is 100%.
Bootstrap support for O84007 as seed ortholog is 100%.

Group of orthologs #63. Best score 233 bits
Score difference with first non-orthologous sequence - C.jacchus:92 C.trachomatis:233

F7IIB5              	100.00%		O84049              	100.00%
Bootstrap support for F7IIB5 as seed ortholog is 98%.
Bootstrap support for O84049 as seed ortholog is 100%.

Group of orthologs #64. Best score 231 bits
Score difference with first non-orthologous sequence - C.jacchus:231 C.trachomatis:231

F6ZHY4              	100.00%		O84562              	100.00%
Bootstrap support for F6ZHY4 as seed ortholog is 100%.
Bootstrap support for O84562 as seed ortholog is 100%.

Group of orthologs #65. Best score 231 bits
Score difference with first non-orthologous sequence - C.jacchus:231 C.trachomatis:231

F7GRS3              	100.00%		P0CD72              	100.00%
Bootstrap support for F7GRS3 as seed ortholog is 100%.
Bootstrap support for P0CD72 as seed ortholog is 100%.

Group of orthologs #66. Best score 229 bits
Score difference with first non-orthologous sequence - C.jacchus:59 C.trachomatis:229

F7HV74              	100.00%		O84423              	100.00%
Bootstrap support for F7HV74 as seed ortholog is 81%.
Bootstrap support for O84423 as seed ortholog is 100%.

Group of orthologs #67. Best score 226 bits
Score difference with first non-orthologous sequence - C.jacchus:226 C.trachomatis:226

F7HMM1              	100.00%		O84360              	100.00%
Bootstrap support for F7HMM1 as seed ortholog is 100%.
Bootstrap support for O84360 as seed ortholog is 100%.

Group of orthologs #68. Best score 223 bits
Score difference with first non-orthologous sequence - C.jacchus:223 C.trachomatis:99

F7GMY3              	100.00%		O84028              	100.00%
Bootstrap support for F7GMY3 as seed ortholog is 100%.
Bootstrap support for O84028 as seed ortholog is 99%.

Group of orthologs #69. Best score 221 bits
Score difference with first non-orthologous sequence - C.jacchus:221 C.trachomatis:221

F6T7V7              	100.00%		O84065              	100.00%
Bootstrap support for F6T7V7 as seed ortholog is 100%.
Bootstrap support for O84065 as seed ortholog is 100%.

Group of orthologs #70. Best score 220 bits
Score difference with first non-orthologous sequence - C.jacchus:220 C.trachomatis:220

F7DH24              	100.00%		O84081              	100.00%
F6ZFR0              	52.03%		
F6QQ06              	22.91%		
Bootstrap support for F7DH24 as seed ortholog is 100%.
Bootstrap support for O84081 as seed ortholog is 100%.

Group of orthologs #71. Best score 217 bits
Score difference with first non-orthologous sequence - C.jacchus:217 C.trachomatis:217

F7GQH4              	100.00%		O84613              	100.00%
Bootstrap support for F7GQH4 as seed ortholog is 100%.
Bootstrap support for O84613 as seed ortholog is 100%.

Group of orthologs #72. Best score 213 bits
Score difference with first non-orthologous sequence - C.jacchus:38 C.trachomatis:213

F7A9F9              	100.00%		O84266              	100.00%
F7I514              	19.69%		
F7IS70              	14.73%		
F7AE49              	12.71%		
H9KW64              	10.70%		
Bootstrap support for F7A9F9 as seed ortholog is 82%.
Bootstrap support for O84266 as seed ortholog is 100%.

Group of orthologs #73. Best score 213 bits
Score difference with first non-orthologous sequence - C.jacchus:22 C.trachomatis:213

F6T912              	100.00%		O84345              	100.00%
Bootstrap support for F6T912 as seed ortholog is 79%.
Bootstrap support for O84345 as seed ortholog is 100%.

Group of orthologs #74. Best score 211 bits
Score difference with first non-orthologous sequence - C.jacchus:211 C.trachomatis:211

F7IR45              	100.00%		O84787              	100.00%
Bootstrap support for F7IR45 as seed ortholog is 100%.
Bootstrap support for O84787 as seed ortholog is 100%.

Group of orthologs #75. Best score 208 bits
Score difference with first non-orthologous sequence - C.jacchus:208 C.trachomatis:208

F7GU26              	100.00%		O84812              	100.00%
F7I0E6              	17.70%		
Bootstrap support for F7GU26 as seed ortholog is 100%.
Bootstrap support for O84812 as seed ortholog is 100%.

Group of orthologs #76. Best score 208 bits
Score difference with first non-orthologous sequence - C.jacchus:208 C.trachomatis:68

F6XF21              	100.00%		O84712              	100.00%
Bootstrap support for F6XF21 as seed ortholog is 100%.
Bootstrap support for O84712 as seed ortholog is 99%.

Group of orthologs #77. Best score 204 bits
Score difference with first non-orthologous sequence - C.jacchus:204 C.trachomatis:88

F7FQH5              	100.00%		O84406              	100.00%
F6PIC8              	32.97%		
F6TDN5              	26.86%		
F6SPU2              	23.32%		
F7EEY2              	23.08%		
F7ISE6              	16.85%		
F7IHZ7              	16.12%		
Bootstrap support for F7FQH5 as seed ortholog is 100%.
Bootstrap support for O84406 as seed ortholog is 99%.

Group of orthologs #78. Best score 203 bits
Score difference with first non-orthologous sequence - C.jacchus:203 C.trachomatis:203

F6TUD2              	100.00%		O84638              	100.00%
Bootstrap support for F6TUD2 as seed ortholog is 100%.
Bootstrap support for O84638 as seed ortholog is 100%.

Group of orthologs #79. Best score 203 bits
Score difference with first non-orthologous sequence - C.jacchus:79 C.trachomatis:78

F7HK59              	100.00%		O84058              	100.00%
Bootstrap support for F7HK59 as seed ortholog is 92%.
Bootstrap support for O84058 as seed ortholog is 98%.

Group of orthologs #80. Best score 201 bits
Score difference with first non-orthologous sequence - C.jacchus:201 C.trachomatis:201

F7IHB9              	100.00%		O84859              	100.00%
F7B092              	11.02%		
Bootstrap support for F7IHB9 as seed ortholog is 100%.
Bootstrap support for O84859 as seed ortholog is 100%.

Group of orthologs #81. Best score 195 bits
Score difference with first non-orthologous sequence - C.jacchus:195 C.trachomatis:195

F7GYQ9              	100.00%		O84196              	100.00%
Bootstrap support for F7GYQ9 as seed ortholog is 100%.
Bootstrap support for O84196 as seed ortholog is 100%.

Group of orthologs #82. Best score 192 bits
Score difference with first non-orthologous sequence - C.jacchus:113 C.trachomatis:192

F7IDF0              	100.00%		O84608              	100.00%
F7IHK8              	63.89%		
F7DMZ6              	45.37%		
F7D6R2              	35.65%		
Bootstrap support for F7IDF0 as seed ortholog is 99%.
Bootstrap support for O84608 as seed ortholog is 100%.

Group of orthologs #83. Best score 188 bits
Score difference with first non-orthologous sequence - C.jacchus:188 C.trachomatis:188

F7DJM6              	100.00%		O84596              	100.00%
Bootstrap support for F7DJM6 as seed ortholog is 100%.
Bootstrap support for O84596 as seed ortholog is 100%.

Group of orthologs #84. Best score 187 bits
Score difference with first non-orthologous sequence - C.jacchus:187 C.trachomatis:187

F7GS69              	100.00%		O84874              	100.00%
Bootstrap support for F7GS69 as seed ortholog is 100%.
Bootstrap support for O84874 as seed ortholog is 100%.

Group of orthologs #85. Best score 186 bits
Score difference with first non-orthologous sequence - C.jacchus:186 C.trachomatis:186

F7CVL7              	100.00%		O84402              	100.00%
F7AWT4              	20.57%		
F7C0G6              	8.65%		
Bootstrap support for F7CVL7 as seed ortholog is 100%.
Bootstrap support for O84402 as seed ortholog is 100%.

Group of orthologs #86. Best score 185 bits
Score difference with first non-orthologous sequence - C.jacchus:185 C.trachomatis:185

F7HKN9              	100.00%		O84704              	100.00%
Bootstrap support for F7HKN9 as seed ortholog is 100%.
Bootstrap support for O84704 as seed ortholog is 100%.

Group of orthologs #87. Best score 183 bits
Score difference with first non-orthologous sequence - C.jacchus:67 C.trachomatis:183

F6YAV3              	100.00%		O84247              	100.00%
F7I4M1              	67.77%		
Bootstrap support for F6YAV3 as seed ortholog is 97%.
Bootstrap support for O84247 as seed ortholog is 100%.

Group of orthologs #88. Best score 180 bits
Score difference with first non-orthologous sequence - C.jacchus:44 C.trachomatis:180

F7IHJ3              	100.00%		P38004              	100.00%
Bootstrap support for F7IHJ3 as seed ortholog is 93%.
Bootstrap support for P38004 as seed ortholog is 100%.

Group of orthologs #89. Best score 179 bits
Score difference with first non-orthologous sequence - C.jacchus:179 C.trachomatis:179

F7BWS5              	100.00%		O84332              	100.00%
Bootstrap support for F7BWS5 as seed ortholog is 100%.
Bootstrap support for O84332 as seed ortholog is 100%.

Group of orthologs #90. Best score 178 bits
Score difference with first non-orthologous sequence - C.jacchus:178 C.trachomatis:178

F7IBX9              	100.00%		P18584              	100.00%
F7CCU9              	40.28%		
F6YQ22              	32.91%		
F7IP65              	14.75%		
Bootstrap support for F7IBX9 as seed ortholog is 100%.
Bootstrap support for P18584 as seed ortholog is 100%.

Group of orthologs #91. Best score 175 bits
Score difference with first non-orthologous sequence - C.jacchus:112 C.trachomatis:175

F6UHK6              	100.00%		O84234              	100.00%
F7BP63              	31.19%		
F7GHJ1              	29.22%		
F6Z7L2              	25.53%		
F6T6E5              	23.89%		
F7F4X0              	23.21%		
F7FJT5              	23.14%		
F7HID2              	23.07%		
F7BZG1              	21.64%		
F7BRA1              	20.48%		
F6PNV4              	20.34%		
F7IAF7              	17.75%		
F7FBD6              	16.45%		
F7H6A1              	14.47%		
F7EDK0              	9.01%		
F7GZK2              	9.01%		
F7H173              	7.44%		
Bootstrap support for F6UHK6 as seed ortholog is 75%.
Bootstrap support for O84234 as seed ortholog is 100%.

Group of orthologs #92. Best score 171 bits
Score difference with first non-orthologous sequence - C.jacchus:13 C.trachomatis:171

F6VDA5              	100.00%		O84734              	100.00%
Bootstrap support for F6VDA5 as seed ortholog is 63%.
Alternative seed ortholog is F7IHE1 (13 bits away from this cluster)
Bootstrap support for O84734 as seed ortholog is 100%.

Group of orthologs #93. Best score 170 bits
Score difference with first non-orthologous sequence - C.jacchus:170 C.trachomatis:170

F7IKM8              	100.00%		O84274              	100.00%
Bootstrap support for F7IKM8 as seed ortholog is 100%.
Bootstrap support for O84274 as seed ortholog is 100%.

Group of orthologs #94. Best score 165 bits
Score difference with first non-orthologous sequence - C.jacchus:165 C.trachomatis:165

F7GX58              	100.00%		O84456              	100.00%
Bootstrap support for F7GX58 as seed ortholog is 100%.
Bootstrap support for O84456 as seed ortholog is 100%.

Group of orthologs #95. Best score 163 bits
Score difference with first non-orthologous sequence - C.jacchus:163 C.trachomatis:50

F7CD10              	100.00%		O84755              	100.00%
F7IQU9              	44.98%		
Bootstrap support for F7CD10 as seed ortholog is 100%.
Bootstrap support for O84755 as seed ortholog is 81%.

Group of orthologs #96. Best score 160 bits
Score difference with first non-orthologous sequence - C.jacchus:160 C.trachomatis:160

F7F747              	100.00%		O84383              	100.00%
Bootstrap support for F7F747 as seed ortholog is 100%.
Bootstrap support for O84383 as seed ortholog is 100%.

Group of orthologs #97. Best score 160 bits
Score difference with first non-orthologous sequence - C.jacchus:160 C.trachomatis:94

F7IFC0              	100.00%		O84055              	100.00%
Bootstrap support for F7IFC0 as seed ortholog is 100%.
Bootstrap support for O84055 as seed ortholog is 99%.

Group of orthologs #98. Best score 156 bits
Score difference with first non-orthologous sequence - C.jacchus:156 C.trachomatis:156

F6XJQ8              	100.00%		O84720              	100.00%
F7GXD2              	34.52%		
Bootstrap support for F6XJQ8 as seed ortholog is 100%.
Bootstrap support for O84720 as seed ortholog is 100%.

Group of orthologs #99. Best score 155 bits
Score difference with first non-orthologous sequence - C.jacchus:155 C.trachomatis:155

F6Z822              	100.00%		O84632              	100.00%
Bootstrap support for F6Z822 as seed ortholog is 100%.
Bootstrap support for O84632 as seed ortholog is 100%.

Group of orthologs #100. Best score 153 bits
Score difference with first non-orthologous sequence - C.jacchus:108 C.trachomatis:153

F7HXH1              	100.00%		O84727              	100.00%
F6Y5Q5              	75.88%		
F6ZAL3              	75.34%		
F7H1H4              	58.54%		
F6UCY5              	46.61%		
F7I7R4              	44.17%		
F7INR6              	39.84%		
F7IFM9              	39.02%		
F7BRH0              	36.86%		
F6ZG53              	36.04%		
F6PHT5              	16.53%		
F6X9M1              	16.53%		
Bootstrap support for F7HXH1 as seed ortholog is 99%.
Bootstrap support for O84727 as seed ortholog is 100%.

Group of orthologs #101. Best score 144 bits
Score difference with first non-orthologous sequence - C.jacchus:144 C.trachomatis:144

F7HWR0              	100.00%		O84752              	100.00%
Bootstrap support for F7HWR0 as seed ortholog is 100%.
Bootstrap support for O84752 as seed ortholog is 100%.

Group of orthologs #102. Best score 140 bits
Score difference with first non-orthologous sequence - C.jacchus:41 C.trachomatis:140

F7C2K4              	100.00%		O84200              	100.00%
Bootstrap support for F7C2K4 as seed ortholog is 82%.
Bootstrap support for O84200 as seed ortholog is 100%.

Group of orthologs #103. Best score 138 bits
Score difference with first non-orthologous sequence - C.jacchus:86 C.trachomatis:138

F7EFP4              	100.00%		O84589              	100.00%
Bootstrap support for F7EFP4 as seed ortholog is 98%.
Bootstrap support for O84589 as seed ortholog is 100%.

Group of orthologs #104. Best score 136 bits
Score difference with first non-orthologous sequence - C.jacchus:136 C.trachomatis:136

F7EDM8              	100.00%		O84864              	100.00%
F7I9U6              	5.61%		
Bootstrap support for F7EDM8 as seed ortholog is 100%.
Bootstrap support for O84864 as seed ortholog is 100%.

Group of orthologs #105. Best score 134 bits
Score difference with first non-orthologous sequence - C.jacchus:134 C.trachomatis:134

F7ECN1              	100.00%		O84123              	100.00%
Bootstrap support for F7ECN1 as seed ortholog is 100%.
Bootstrap support for O84123 as seed ortholog is 100%.

Group of orthologs #106. Best score 133 bits
Score difference with first non-orthologous sequence - C.jacchus:42 C.trachomatis:133

F7H807              	100.00%		O84530              	100.00%
Bootstrap support for F7H807 as seed ortholog is 90%.
Bootstrap support for O84530 as seed ortholog is 100%.

Group of orthologs #107. Best score 131 bits
Score difference with first non-orthologous sequence - C.jacchus:52 C.trachomatis:131

F7GMY5              	100.00%		O84732              	100.00%
F7DPP1              	75.52%		
F7C693              	71.00%		
F6T7K6              	69.50%		
F7I861              	8.06%		
F7I0N5              	7.44%		
F6RWS8              	7.44%		
F7IBZ3              	7.39%		
F7I2Y8              	7.26%		
F7GV44              	6.82%		
F7HZG9              	6.73%		
F6RBJ2              	6.15%		
F7HUR2              	6.11%		
Bootstrap support for F7GMY5 as seed ortholog is 71%.
Alternative seed ortholog is F7I067 (52 bits away from this cluster)
Bootstrap support for O84732 as seed ortholog is 100%.

Group of orthologs #108. Best score 131 bits
Score difference with first non-orthologous sequence - C.jacchus:131 C.trachomatis:131

F7I7U4              	100.00%		O84835              	100.00%
F7GFM3              	74.48%		
Bootstrap support for F7I7U4 as seed ortholog is 100%.
Bootstrap support for O84835 as seed ortholog is 100%.

Group of orthologs #109. Best score 128 bits
Score difference with first non-orthologous sequence - C.jacchus:128 C.trachomatis:40

F7HBT7              	100.00%		O84260              	100.00%
Bootstrap support for F7HBT7 as seed ortholog is 100%.
Bootstrap support for O84260 as seed ortholog is 85%.

Group of orthologs #110. Best score 125 bits
Score difference with first non-orthologous sequence - C.jacchus:125 C.trachomatis:125

F6WQ42              	100.00%		O84771              	100.00%
Bootstrap support for F6WQ42 as seed ortholog is 100%.
Bootstrap support for O84771 as seed ortholog is 100%.

Group of orthologs #111. Best score 124 bits
Score difference with first non-orthologous sequence - C.jacchus:124 C.trachomatis:124

F6T667              	100.00%		O84492              	100.00%
Bootstrap support for F6T667 as seed ortholog is 100%.
Bootstrap support for O84492 as seed ortholog is 100%.

Group of orthologs #112. Best score 124 bits
Score difference with first non-orthologous sequence - C.jacchus:124 C.trachomatis:124

F6ZS88              	100.00%		O84391              	100.00%
Bootstrap support for F6ZS88 as seed ortholog is 100%.
Bootstrap support for O84391 as seed ortholog is 100%.

Group of orthologs #113. Best score 122 bits
Score difference with first non-orthologous sequence - C.jacchus:33 C.trachomatis:122

F6WDZ4              	100.00%		O84130              	100.00%
F7IQS3              	58.98%		
F7GT48              	47.31%		
F6XQ43              	15.27%		
F7CAR4              	12.57%		
Bootstrap support for F6WDZ4 as seed ortholog is 85%.
Bootstrap support for O84130 as seed ortholog is 100%.

Group of orthologs #114. Best score 122 bits
Score difference with first non-orthologous sequence - C.jacchus:122 C.trachomatis:122

F7G6W7              	100.00%		O84241              	100.00%
Bootstrap support for F7G6W7 as seed ortholog is 100%.
Bootstrap support for O84241 as seed ortholog is 100%.

Group of orthologs #115. Best score 114 bits
Score difference with first non-orthologous sequence - C.jacchus:32 C.trachomatis:114

F7FUB6              	100.00%		O84508              	100.00%
F6WF21              	43.91%		
Bootstrap support for F7FUB6 as seed ortholog is 94%.
Bootstrap support for O84508 as seed ortholog is 100%.

Group of orthologs #116. Best score 114 bits
Score difference with first non-orthologous sequence - C.jacchus:114 C.trachomatis:114

F7FN68              	100.00%		O84478              	100.00%
Bootstrap support for F7FN68 as seed ortholog is 100%.
Bootstrap support for O84478 as seed ortholog is 100%.

Group of orthologs #117. Best score 114 bits
Score difference with first non-orthologous sequence - C.jacchus:38 C.trachomatis:114

F7IRW0              	100.00%		O84599              	100.00%
Bootstrap support for F7IRW0 as seed ortholog is 87%.
Bootstrap support for O84599 as seed ortholog is 100%.

Group of orthologs #118. Best score 112 bits
Score difference with first non-orthologous sequence - C.jacchus:112 C.trachomatis:112

F6UHC1              	100.00%		O84033              	100.00%
Bootstrap support for F6UHC1 as seed ortholog is 100%.
Bootstrap support for O84033 as seed ortholog is 100%.

Group of orthologs #119. Best score 112 bits
Score difference with first non-orthologous sequence - C.jacchus:63 C.trachomatis:112

F7ILY2              	100.00%		P66370              	100.00%
Bootstrap support for F7ILY2 as seed ortholog is 99%.
Bootstrap support for P66370 as seed ortholog is 100%.

Group of orthologs #120. Best score 108 bits
Score difference with first non-orthologous sequence - C.jacchus:108 C.trachomatis:108

F7ETR4              	100.00%		O84096              	100.00%
Bootstrap support for F7ETR4 as seed ortholog is 100%.
Bootstrap support for O84096 as seed ortholog is 100%.

Group of orthologs #121. Best score 107 bits
Score difference with first non-orthologous sequence - C.jacchus:107 C.trachomatis:107

F6UGE7              	100.00%		O84710              	100.00%
                    	       		O84415              	7.12%
Bootstrap support for F6UGE7 as seed ortholog is 100%.
Bootstrap support for O84710 as seed ortholog is 100%.

Group of orthologs #122. Best score 107 bits
Score difference with first non-orthologous sequence - C.jacchus:16 C.trachomatis:107

F6W7L4              	100.00%		O84358              	100.00%
Bootstrap support for F6W7L4 as seed ortholog is 66%.
Alternative seed ortholog is F7I886 (16 bits away from this cluster)
Bootstrap support for O84358 as seed ortholog is 100%.

Group of orthologs #123. Best score 105 bits
Score difference with first non-orthologous sequence - C.jacchus:105 C.trachomatis:105

F7EL42              	100.00%		O84215              	100.00%
F7GXE1              	39.92%		
Bootstrap support for F7EL42 as seed ortholog is 100%.
Bootstrap support for O84215 as seed ortholog is 100%.

Group of orthologs #124. Best score 104 bits
Score difference with first non-orthologous sequence - C.jacchus:104 C.trachomatis:104

F7FES9              	100.00%		O84719              	100.00%
F6XMM7              	68.87%		
Bootstrap support for F7FES9 as seed ortholog is 100%.
Bootstrap support for O84719 as seed ortholog is 100%.

Group of orthologs #125. Best score 102 bits
Score difference with first non-orthologous sequence - C.jacchus:102 C.trachomatis:102

F6XT45              	100.00%		O84301              	100.00%
Bootstrap support for F6XT45 as seed ortholog is 100%.
Bootstrap support for O84301 as seed ortholog is 100%.

Group of orthologs #126. Best score 98 bits
Score difference with first non-orthologous sequence - C.jacchus:31 C.trachomatis:98

F7GX90              	100.00%		P0CE03              	100.00%
F7HWW0              	60.42%		
Bootstrap support for F7GX90 as seed ortholog is 94%.
Bootstrap support for P0CE03 as seed ortholog is 100%.

Group of orthologs #127. Best score 97 bits
Score difference with first non-orthologous sequence - C.jacchus:97 C.trachomatis:97

F7DXD5              	100.00%		O84390              	100.00%
F7EQY7              	100.00%		
F7IT51              	100.00%		
F7HV89              	98.18%		
F7H523              	92.12%		
Bootstrap support for F7DXD5 as seed ortholog is 100%.
Bootstrap support for F7EQY7 as seed ortholog is 100%.
Bootstrap support for F7IT51 as seed ortholog is 100%.
Bootstrap support for O84390 as seed ortholog is 100%.

Group of orthologs #128. Best score 97 bits
Score difference with first non-orthologous sequence - C.jacchus:97 C.trachomatis:97

F7HX55              	100.00%		O84212              	100.00%
F6Q378              	8.77%		
Bootstrap support for F7HX55 as seed ortholog is 100%.
Bootstrap support for O84212 as seed ortholog is 100%.

Group of orthologs #129. Best score 96 bits
Score difference with first non-orthologous sequence - C.jacchus:96 C.trachomatis:96

F7IPS1              	100.00%		O84843              	100.00%
Bootstrap support for F7IPS1 as seed ortholog is 100%.
Bootstrap support for O84843 as seed ortholog is 100%.

Group of orthologs #130. Best score 95 bits
Score difference with first non-orthologous sequence - C.jacchus:21 C.trachomatis:95

F7EEK5              	100.00%		O84469              	100.00%
Bootstrap support for F7EEK5 as seed ortholog is 69%.
Alternative seed ortholog is F7GU24 (21 bits away from this cluster)
Bootstrap support for O84469 as seed ortholog is 100%.

Group of orthologs #131. Best score 94 bits
Score difference with first non-orthologous sequence - C.jacchus:94 C.trachomatis:94

F7ID07              	100.00%		O84782              	100.00%
F6YP89              	17.00%		
F7I454              	13.85%		
F7IPL5              	10.96%		
F7ARU6              	9.70%		
Bootstrap support for F7ID07 as seed ortholog is 100%.
Bootstrap support for O84782 as seed ortholog is 100%.

Group of orthologs #132. Best score 94 bits
Score difference with first non-orthologous sequence - C.jacchus:94 C.trachomatis:94

F7HWQ6              	100.00%		P55137              	100.00%
F7C7M5              	22.19%		
Bootstrap support for F7HWQ6 as seed ortholog is 100%.
Bootstrap support for P55137 as seed ortholog is 100%.

Group of orthologs #133. Best score 94 bits
Score difference with first non-orthologous sequence - C.jacchus:94 C.trachomatis:94

F7GUJ9              	100.00%		O84350              	100.00%
Bootstrap support for F7GUJ9 as seed ortholog is 100%.
Bootstrap support for O84350 as seed ortholog is 100%.

Group of orthologs #134. Best score 93 bits
Score difference with first non-orthologous sequence - C.jacchus:47 C.trachomatis:93

F7I282              	100.00%		P0CE06              	100.00%
F7H5P6              	88.56%		
Bootstrap support for F7I282 as seed ortholog is 95%.
Bootstrap support for P0CE06 as seed ortholog is 100%.

Group of orthologs #135. Best score 93 bits
Score difference with first non-orthologous sequence - C.jacchus:93 C.trachomatis:93

F6SY06              	100.00%		O84806              	100.00%
Bootstrap support for F6SY06 as seed ortholog is 100%.
Bootstrap support for O84806 as seed ortholog is 100%.

Group of orthologs #136. Best score 92 bits
Score difference with first non-orthologous sequence - C.jacchus:92 C.trachomatis:92

F7GK51              	100.00%		P0CD79              	100.00%
Bootstrap support for F7GK51 as seed ortholog is 100%.
Bootstrap support for P0CD79 as seed ortholog is 100%.

Group of orthologs #137. Best score 91 bits
Score difference with first non-orthologous sequence - C.jacchus:51 C.trachomatis:91

F7HVF5              	100.00%		O84435              	100.00%
Bootstrap support for F7HVF5 as seed ortholog is 94%.
Bootstrap support for O84435 as seed ortholog is 100%.

Group of orthologs #138. Best score 90 bits
Score difference with first non-orthologous sequence - C.jacchus:90 C.trachomatis:90

F7IF92              	100.00%		O84578              	100.00%
F6V2W6              	7.80%		
Bootstrap support for F7IF92 as seed ortholog is 100%.
Bootstrap support for O84578 as seed ortholog is 100%.

Group of orthologs #139. Best score 90 bits
Score difference with first non-orthologous sequence - C.jacchus:90 C.trachomatis:90

F7I4J3              	100.00%		O84321              	100.00%
Bootstrap support for F7I4J3 as seed ortholog is 100%.
Bootstrap support for O84321 as seed ortholog is 100%.

Group of orthologs #140. Best score 89 bits
Score difference with first non-orthologous sequence - C.jacchus:89 C.trachomatis:89

F7ADD1              	100.00%		O84649              	100.00%
F7BHS6              	14.81%		
Bootstrap support for F7ADD1 as seed ortholog is 100%.
Bootstrap support for O84649 as seed ortholog is 100%.

Group of orthologs #141. Best score 87 bits
Score difference with first non-orthologous sequence - C.jacchus:87 C.trachomatis:87

F7GSB1              	100.00%		O84851              	100.00%
Bootstrap support for F7GSB1 as seed ortholog is 100%.
Bootstrap support for O84851 as seed ortholog is 100%.

Group of orthologs #142. Best score 86 bits
Score difference with first non-orthologous sequence - C.jacchus:86 C.trachomatis:86

F7ICU2              	100.00%		O84027              	100.00%
Bootstrap support for F7ICU2 as seed ortholog is 100%.
Bootstrap support for O84027 as seed ortholog is 100%.

Group of orthologs #143. Best score 86 bits
Score difference with first non-orthologous sequence - C.jacchus:86 C.trachomatis:86

F7INC0              	100.00%		O84595              	100.00%
Bootstrap support for F7INC0 as seed ortholog is 100%.
Bootstrap support for O84595 as seed ortholog is 100%.

Group of orthologs #144. Best score 85 bits
Score difference with first non-orthologous sequence - C.jacchus:85 C.trachomatis:85

F7GPR6              	100.00%		O84294              	100.00%
Bootstrap support for F7GPR6 as seed ortholog is 100%.
Bootstrap support for O84294 as seed ortholog is 100%.

Group of orthologs #145. Best score 84 bits
Score difference with first non-orthologous sequence - C.jacchus:84 C.trachomatis:84

F6T057              	100.00%		O84463              	100.00%
Bootstrap support for F6T057 as seed ortholog is 100%.
Bootstrap support for O84463 as seed ortholog is 100%.

Group of orthologs #146. Best score 84 bits
Score difference with first non-orthologous sequence - C.jacchus:43 C.trachomatis:84

F6TRS0              	100.00%		O84687              	100.00%
Bootstrap support for F6TRS0 as seed ortholog is 94%.
Bootstrap support for O84687 as seed ortholog is 100%.

Group of orthologs #147. Best score 84 bits
Score difference with first non-orthologous sequence - C.jacchus:84 C.trachomatis:84

F7F184              	100.00%		O84611              	100.00%
Bootstrap support for F7F184 as seed ortholog is 100%.
Bootstrap support for O84611 as seed ortholog is 100%.

Group of orthologs #148. Best score 83 bits
Score difference with first non-orthologous sequence - C.jacchus:83 C.trachomatis:83

F7GX92              	100.00%		O84750              	100.00%
Bootstrap support for F7GX92 as seed ortholog is 100%.
Bootstrap support for O84750 as seed ortholog is 100%.

Group of orthologs #149. Best score 82 bits
Score difference with first non-orthologous sequence - C.jacchus:82 C.trachomatis:82

F6RJY9              	100.00%		O84865              	100.00%
Bootstrap support for F6RJY9 as seed ortholog is 100%.
Bootstrap support for O84865 as seed ortholog is 100%.

Group of orthologs #150. Best score 82 bits
Score difference with first non-orthologous sequence - C.jacchus:82 C.trachomatis:82

F6TY55              	100.00%		O84535              	100.00%
Bootstrap support for F6TY55 as seed ortholog is 100%.
Bootstrap support for O84535 as seed ortholog is 100%.

Group of orthologs #151. Best score 82 bits
Score difference with first non-orthologous sequence - C.jacchus:82 C.trachomatis:82

F7IC68              	100.00%		O84533              	100.00%
Bootstrap support for F7IC68 as seed ortholog is 100%.
Bootstrap support for O84533 as seed ortholog is 100%.

Group of orthologs #152. Best score 81 bits
Score difference with first non-orthologous sequence - C.jacchus:81 C.trachomatis:81

F6RHX6              	100.00%		O84547              	100.00%
F7I7A3              	69.23%		
Bootstrap support for F6RHX6 as seed ortholog is 100%.
Bootstrap support for O84547 as seed ortholog is 100%.

Group of orthologs #153. Best score 81 bits
Score difference with first non-orthologous sequence - C.jacchus:81 C.trachomatis:81

F6YEP4              	100.00%		O84468              	100.00%
Bootstrap support for F6YEP4 as seed ortholog is 100%.
Bootstrap support for O84468 as seed ortholog is 100%.

Group of orthologs #154. Best score 81 bits
Score difference with first non-orthologous sequence - C.jacchus:81 C.trachomatis:81

F6ZGY9              	100.00%		O84189              	100.00%
Bootstrap support for F6ZGY9 as seed ortholog is 100%.
Bootstrap support for O84189 as seed ortholog is 100%.

Group of orthologs #155. Best score 80 bits
Score difference with first non-orthologous sequence - C.jacchus:80 C.trachomatis:80

F7BQP5              	100.00%		O84357              	100.00%
Bootstrap support for F7BQP5 as seed ortholog is 100%.
Bootstrap support for O84357 as seed ortholog is 100%.

Group of orthologs #156. Best score 79 bits
Score difference with first non-orthologous sequence - C.jacchus:32 C.trachomatis:79

F6U2S0              	100.00%		O84338              	100.00%
F7H145              	69.23%		
F6X3F5              	65.06%		
F7I0W9              	42.47%		
F7I7V3              	22.28%		
F7HZR1              	19.07%		
Bootstrap support for F6U2S0 as seed ortholog is 83%.
Bootstrap support for O84338 as seed ortholog is 100%.

Group of orthologs #157. Best score 77 bits
Score difference with first non-orthologous sequence - C.jacchus:77 C.trachomatis:77

F7HE72              	100.00%		O84686              	100.00%
Bootstrap support for F7HE72 as seed ortholog is 100%.
Bootstrap support for O84686 as seed ortholog is 100%.

Group of orthologs #158. Best score 76 bits
Score difference with first non-orthologous sequence - C.jacchus:76 C.trachomatis:76

F7IBX3              	100.00%		O84307              	100.00%
F6PPP0              	49.12%		
F7GBX3              	42.21%		
F7CGX5              	41.12%		
Bootstrap support for F7IBX3 as seed ortholog is 100%.
Bootstrap support for O84307 as seed ortholog is 100%.

Group of orthologs #159. Best score 76 bits
Score difference with first non-orthologous sequence - C.jacchus:76 C.trachomatis:76

F6YGI3              	100.00%		O84684              	100.00%
Bootstrap support for F6YGI3 as seed ortholog is 100%.
Bootstrap support for O84684 as seed ortholog is 100%.

Group of orthologs #160. Best score 75 bits
Score difference with first non-orthologous sequence - C.jacchus:75 C.trachomatis:75

F6RTL3              	100.00%		O84650              	100.00%
F6Q471              	12.87%		
H9KVQ1              	10.26%		
F7I5L3              	7.65%		
Bootstrap support for F6RTL3 as seed ortholog is 100%.
Bootstrap support for O84650 as seed ortholog is 100%.

Group of orthologs #161. Best score 72 bits
Score difference with first non-orthologous sequence - C.jacchus:23 C.trachomatis:72

F7H7S1              	100.00%		O84781              	100.00%
F7C1E6              	66.38%		
F7IQB0              	57.65%		
F7BGD7              	17.31%		
F7AET8              	16.31%		
F7CJE3              	6.37%		
F7EBS2              	6.29%		
Bootstrap support for F7H7S1 as seed ortholog is 69%.
Alternative seed ortholog is F7ISY6 (23 bits away from this cluster)
Bootstrap support for O84781 as seed ortholog is 100%.

Group of orthologs #162. Best score 72 bits
Score difference with first non-orthologous sequence - C.jacchus:72 C.trachomatis:72

F6Y2W4              	100.00%		O84792              	100.00%
F7IJ45              	98.95%		
Bootstrap support for F6Y2W4 as seed ortholog is 100%.
Bootstrap support for O84792 as seed ortholog is 100%.

Group of orthologs #163. Best score 72 bits
Score difference with first non-orthologous sequence - C.jacchus:72 C.trachomatis:72

F7GAG7              	100.00%		O84540              	100.00%
Bootstrap support for F7GAG7 as seed ortholog is 100%.
Bootstrap support for O84540 as seed ortholog is 100%.

Group of orthologs #164. Best score 71 bits
Score difference with first non-orthologous sequence - C.jacchus:71 C.trachomatis:71

F7HZF9              	100.00%		O84499              	100.00%
Bootstrap support for F7HZF9 as seed ortholog is 100%.
Bootstrap support for O84499 as seed ortholog is 100%.

Group of orthologs #165. Best score 70 bits
Score difference with first non-orthologous sequence - C.jacchus:70 C.trachomatis:70

F7ISB8              	100.00%		O84108              	100.00%
                    	       		O84665              	8.12%
Bootstrap support for F7ISB8 as seed ortholog is 100%.
Bootstrap support for O84108 as seed ortholog is 100%.

Group of orthologs #166. Best score 69 bits
Score difference with first non-orthologous sequence - C.jacchus:69 C.trachomatis:69

F7IM64              	100.00%		O84127              	100.00%
F6S6K9              	99.34%		
Bootstrap support for F7IM64 as seed ortholog is 100%.
Bootstrap support for O84127 as seed ortholog is 100%.

Group of orthologs #167. Best score 69 bits
Score difference with first non-orthologous sequence - C.jacchus:69 C.trachomatis:69

F7EKF4              	100.00%		O84139              	100.00%
Bootstrap support for F7EKF4 as seed ortholog is 100%.
Bootstrap support for O84139 as seed ortholog is 100%.

Group of orthologs #168. Best score 68 bits
Score difference with first non-orthologous sequence - C.jacchus:18 C.trachomatis:68

F7DVH3              	100.00%		P0CD81              	100.00%
F7ILM3              	66.98%		
Bootstrap support for F7DVH3 as seed ortholog is 78%.
Bootstrap support for P0CD81 as seed ortholog is 100%.

Group of orthologs #169. Best score 66 bits
Score difference with first non-orthologous sequence - C.jacchus:66 C.trachomatis:66

F6T494              	100.00%		P0C0Z8              	100.00%
F6ZUW6              	100.00%		
F7IQS5              	91.91%		
F7HZV4              	85.29%		
Bootstrap support for F6T494 as seed ortholog is 100%.
Bootstrap support for F6ZUW6 as seed ortholog is 100%.
Bootstrap support for P0C0Z8 as seed ortholog is 100%.

Group of orthologs #170. Best score 65 bits
Score difference with first non-orthologous sequence - C.jacchus:65 C.trachomatis:65

F7I089              	100.00%		P0CE04              	100.00%
F7FGD8              	94.19%		
F6T5U9              	90.46%		
F7HQY7              	89.63%		
F6XW33              	75.10%		
F6SGW8              	68.88%		
F7HVE4              	60.17%		
Bootstrap support for F7I089 as seed ortholog is 100%.
Bootstrap support for P0CE04 as seed ortholog is 100%.

Group of orthologs #171. Best score 65 bits
Score difference with first non-orthologous sequence - C.jacchus:65 C.trachomatis:65

Q9BDJ3              	100.00%		O84544              	100.00%
F7G6L6              	88.24%		
F6YVA9              	72.55%		
F6S2N6              	28.76%		
F7I2U3              	23.53%		
Bootstrap support for Q9BDJ3 as seed ortholog is 100%.
Bootstrap support for O84544 as seed ortholog is 100%.

Group of orthologs #172. Best score 65 bits
Score difference with first non-orthologous sequence - C.jacchus:65 C.trachomatis:65

F7HAB6              	100.00%		P36424              	100.00%
F6RVY2              	25.69%		
F6XKT0              	7.30%		
Bootstrap support for F7HAB6 as seed ortholog is 100%.
Bootstrap support for P36424 as seed ortholog is 100%.

Group of orthologs #173. Best score 65 bits
Score difference with first non-orthologous sequence - C.jacchus:65 C.trachomatis:65

F6W1J8              	100.00%		P0CD84              	100.00%
Bootstrap support for F6W1J8 as seed ortholog is 100%.
Bootstrap support for P0CD84 as seed ortholog is 100%.

Group of orthologs #174. Best score 65 bits
Score difference with first non-orthologous sequence - C.jacchus:65 C.trachomatis:65

F7AP47              	100.00%		O84284              	100.00%
Bootstrap support for F7AP47 as seed ortholog is 100%.
Bootstrap support for O84284 as seed ortholog is 100%.

Group of orthologs #175. Best score 65 bits
Score difference with first non-orthologous sequence - C.jacchus:65 C.trachomatis:65

F7FLN6              	100.00%		O84221              	100.00%
Bootstrap support for F7FLN6 as seed ortholog is 100%.
Bootstrap support for O84221 as seed ortholog is 100%.

Group of orthologs #176. Best score 64 bits
Score difference with first non-orthologous sequence - C.jacchus:64 C.trachomatis:18

F7IRA1              	100.00%		O84695              	100.00%
H9KWA0              	21.32%		O84205              	16.49%
                    	       		O84204              	16.28%
                    	       		O84696              	16.08%
                    	       		O84132              	9.60%
Bootstrap support for F7IRA1 as seed ortholog is 100%.
Bootstrap support for O84695 as seed ortholog is 64%.
Alternative seed ortholog is O84154 (18 bits away from this cluster)

Group of orthologs #177. Best score 64 bits
Score difference with first non-orthologous sequence - C.jacchus:64 C.trachomatis:64

F6VWS5              	100.00%		O84395              	100.00%
F7AXH1              	23.16%		
Bootstrap support for F6VWS5 as seed ortholog is 100%.
Bootstrap support for O84395 as seed ortholog is 100%.

Group of orthologs #178. Best score 64 bits
Score difference with first non-orthologous sequence - C.jacchus:64 C.trachomatis:64

F7HKF5              	100.00%		O84128              	100.00%
F7BWF0              	39.21%		
Bootstrap support for F7HKF5 as seed ortholog is 100%.
Bootstrap support for O84128 as seed ortholog is 100%.

Group of orthologs #179. Best score 64 bits
Score difference with first non-orthologous sequence - C.jacchus:64 C.trachomatis:64

F7IGM0              	100.00%		O84408              	100.00%
Bootstrap support for F7IGM0 as seed ortholog is 100%.
Bootstrap support for O84408 as seed ortholog is 100%.

Group of orthologs #180. Best score 63 bits
Score difference with first non-orthologous sequence - C.jacchus:63 C.trachomatis:63

F7HA28              	100.00%		O84320              	100.00%
Bootstrap support for F7HA28 as seed ortholog is 100%.
Bootstrap support for O84320 as seed ortholog is 100%.

Group of orthologs #181. Best score 62 bits
Score difference with first non-orthologous sequence - C.jacchus:62 C.trachomatis:62

F7HVZ6              	100.00%		P26623              	100.00%
F6RA35              	78.12%		
F6PIX3              	6.87%		
Bootstrap support for F7HVZ6 as seed ortholog is 100%.
Bootstrap support for P26623 as seed ortholog is 100%.

Group of orthologs #182. Best score 62 bits
Score difference with first non-orthologous sequence - C.jacchus:62 C.trachomatis:62

F7GRD9              	100.00%		O84842              	100.00%
Bootstrap support for F7GRD9 as seed ortholog is 100%.
Bootstrap support for O84842 as seed ortholog is 100%.

Group of orthologs #183. Best score 61 bits
Score difference with first non-orthologous sequence - C.jacchus:61 C.trachomatis:61

F6SEU8              	100.00%		P0CD83              	100.00%
Bootstrap support for F6SEU8 as seed ortholog is 100%.
Bootstrap support for P0CD83 as seed ortholog is 100%.

Group of orthologs #184. Best score 59 bits
Score difference with first non-orthologous sequence - C.jacchus:59 C.trachomatis:59

F7EJX2              	100.00%		O84218              	100.00%
F6W585              	65.81%		
F6YCK3              	38.65%		
F7IFK5              	36.28%		
F6W3J6              	35.04%		
F6X914              	31.91%		
F7HEI5              	31.91%		
Bootstrap support for F7EJX2 as seed ortholog is 100%.
Bootstrap support for O84218 as seed ortholog is 100%.

Group of orthologs #185. Best score 59 bits
Score difference with first non-orthologous sequence - C.jacchus:5 C.trachomatis:59

F6VQ06              	100.00%		O84822              	100.00%
F7IRE1              	50.63%		
Bootstrap support for F6VQ06 as seed ortholog is 53%.
Alternative seed ortholog is F7B447 (5 bits away from this cluster)
Bootstrap support for O84822 as seed ortholog is 100%.

Group of orthologs #186. Best score 59 bits
Score difference with first non-orthologous sequence - C.jacchus:59 C.trachomatis:59

F7GYM4              	100.00%		O84029              	100.00%
Bootstrap support for F7GYM4 as seed ortholog is 100%.
Bootstrap support for O84029 as seed ortholog is 100%.

Group of orthologs #187. Best score 57 bits
Score difference with first non-orthologous sequence - C.jacchus:57 C.trachomatis:57

F7ICS1              	100.00%		P0CE02              	100.00%
F7CKG3              	90.61%		
H9KYL8              	74.59%		
Bootstrap support for F7ICS1 as seed ortholog is 100%.
Bootstrap support for P0CE02 as seed ortholog is 100%.

Group of orthologs #188. Best score 57 bits
Score difference with first non-orthologous sequence - C.jacchus:57 C.trachomatis:57

F7HI20              	100.00%		O84658              	100.00%
Bootstrap support for F7HI20 as seed ortholog is 100%.
Bootstrap support for O84658 as seed ortholog is 100%.

Group of orthologs #189. Best score 56 bits
Score difference with first non-orthologous sequence - C.jacchus:56 C.trachomatis:56

F7BHU3              	100.00%		P0A4C8              	100.00%
F7A846              	96.54%		
F7G5R0              	95.90%		
F7H5M0              	94.82%		
F6UMQ5              	93.30%		
F7I664              	93.09%		
F7IP63              	90.93%		
H9KY94              	90.28%		
F7ID98              	89.85%		
F7EPZ8              	88.34%		
F7EBL2              	87.90%		
F6QG53              	87.26%		
F6VGT3              	87.04%		
F7DGY0              	85.31%		
F7AJ73              	82.29%		
F7EIH2              	80.56%		
F7C0E7              	72.14%		
F7IPA8              	65.87%		
F7A658              	59.61%		
F7HNB2              	55.72%		
F6W8W9              	54.86%		
F7EVR2              	54.43%		
F6WSS5              	33.91%		
F6YIV8              	21.81%		
Bootstrap support for F7BHU3 as seed ortholog is 100%.
Bootstrap support for P0A4C8 as seed ortholog is 100%.

Group of orthologs #190. Best score 55 bits
Score difference with first non-orthologous sequence - C.jacchus:8 C.trachomatis:55

F7EFP1              	100.00%		O84633              	100.00%
Bootstrap support for F7EFP1 as seed ortholog is 48%.
Alternative seed ortholog is F7HZ96 (8 bits away from this cluster)
Bootstrap support for O84633 as seed ortholog is 100%.

Group of orthologs #191. Best score 54 bits
Score difference with first non-orthologous sequence - C.jacchus:54 C.trachomatis:54

F7AS95              	100.00%		P66480              	100.00%
F7I4S3              	64.05%		
F7H036              	60.33%		
H9KXS9              	56.20%		
F7F2B4              	55.79%		
F7CV97              	54.96%		
F6SIZ8              	52.89%		
Bootstrap support for F7AS95 as seed ortholog is 100%.
Bootstrap support for P66480 as seed ortholog is 100%.

Group of orthologs #192. Best score 54 bits
Score difference with first non-orthologous sequence - C.jacchus:54 C.trachomatis:54

F7G280              	100.00%		O84709              	100.00%
Bootstrap support for F7G280 as seed ortholog is 100%.
Bootstrap support for O84709 as seed ortholog is 100%.

Group of orthologs #193. Best score 53 bits
Score difference with first non-orthologous sequence - C.jacchus:53 C.trachomatis:53

F7IE22              	100.00%		O84618              	100.00%
F7IFS4              	100.00%		
Bootstrap support for F7IE22 as seed ortholog is 100%.
Bootstrap support for F7IFS4 as seed ortholog is 100%.
Bootstrap support for O84618 as seed ortholog is 100%.

Group of orthologs #194. Best score 53 bits
Score difference with first non-orthologous sequence - C.jacchus:53 C.trachomatis:53

F7H7N0              	100.00%		O84689              	100.00%
Bootstrap support for F7H7N0 as seed ortholog is 100%.
Bootstrap support for O84689 as seed ortholog is 100%.

Group of orthologs #195. Best score 52 bits
Score difference with first non-orthologous sequence - C.jacchus:52 C.trachomatis:52

F7E1Z4              	100.00%		O84840              	100.00%
Bootstrap support for F7E1Z4 as seed ortholog is 100%.
Bootstrap support for O84840 as seed ortholog is 100%.

Group of orthologs #196. Best score 51 bits
Score difference with first non-orthologous sequence - C.jacchus:51 C.trachomatis:51

H9KWG3              	100.00%		O84160              	100.00%
                    	       		O84159              	20.90%
                    	       		O84156              	12.83%
                    	       		O84086              	11.64%
                    	       		O84157              	5.94%
Bootstrap support for H9KWG3 as seed ortholog is 100%.
Bootstrap support for O84160 as seed ortholog is 100%.

Group of orthologs #197. Best score 51 bits
Score difference with first non-orthologous sequence - C.jacchus:51 C.trachomatis:51

F7I803              	100.00%		O84032              	100.00%
Bootstrap support for F7I803 as seed ortholog is 100%.
Bootstrap support for O84032 as seed ortholog is 100%.

Group of orthologs #198. Best score 50 bits
Score difference with first non-orthologous sequence - C.jacchus:50 C.trachomatis:50

F7E8D9              	100.00%		O84776              	100.00%
Bootstrap support for F7E8D9 as seed ortholog is 100%.
Bootstrap support for O84776 as seed ortholog is 100%.

Group of orthologs #199. Best score 49 bits
Score difference with first non-orthologous sequence - C.jacchus:49 C.trachomatis:49

F6V436              	100.00%		O84527              	100.00%
F6WPC9              	42.86%		
Bootstrap support for F6V436 as seed ortholog is 100%.
Bootstrap support for O84527 as seed ortholog is 100%.

Group of orthologs #200. Best score 48 bits
Score difference with first non-orthologous sequence - C.jacchus:48 C.trachomatis:48

F6RJX1              	100.00%		P0CD80              	100.00%
F7IG99              	38.52%		
F7DLR7              	5.46%		
Bootstrap support for F6RJX1 as seed ortholog is 100%.
Bootstrap support for P0CD80 as seed ortholog is 100%.

Group of orthologs #201. Best score 47 bits
Score difference with first non-orthologous sequence - C.jacchus:47 C.trachomatis:47

F7I072              	100.00%		O84655              	100.00%
Bootstrap support for F7I072 as seed ortholog is 100%.
Bootstrap support for O84655 as seed ortholog is 100%.

Group of orthologs #202. Best score 45 bits
Score difference with first non-orthologous sequence - C.jacchus:45 C.trachomatis:45

F7BEU4              	100.00%		O84147              	100.00%
F7H188              	47.39%		
F7AKA7              	11.03%		
F6V0J0              	10.46%		
F7II56              	10.21%		
F7H6W8              	9.31%		
F7GWQ9              	8.82%		
F7GX03              	7.60%		
F7IFK0              	6.70%		
F7HQ34              	5.23%		
Bootstrap support for F7BEU4 as seed ortholog is 100%.
Bootstrap support for O84147 as seed ortholog is 100%.

Group of orthologs #203. Best score 44 bits
Score difference with first non-orthologous sequence - C.jacchus:44 C.trachomatis:44

F7F752              	100.00%		O84808              	100.00%
F7HUY9              	67.05%		
Bootstrap support for F7F752 as seed ortholog is 100%.
Bootstrap support for O84808 as seed ortholog is 100%.

Group of orthologs #204. Best score 43 bits
Score difference with first non-orthologous sequence - C.jacchus:43 C.trachomatis:43

F7CNX9              	100.00%		O84496              	100.00%
B0KWJ2              	20.89%		
Bootstrap support for F7CNX9 as seed ortholog is 100%.
Bootstrap support for O84496 as seed ortholog is 100%.

Group of orthologs #205. Best score 43 bits
Score difference with first non-orthologous sequence - C.jacchus:43 C.trachomatis:43

F6T5L7              	100.00%		O84778              	100.00%
Bootstrap support for F6T5L7 as seed ortholog is 100%.
Bootstrap support for O84778 as seed ortholog is 100%.

Group of orthologs #206. Best score 42 bits
Score difference with first non-orthologous sequence - C.jacchus:42 C.trachomatis:42

F7BX61              	100.00%		O84151              	100.00%
                    	       		O84209              	6.79%
Bootstrap support for F7BX61 as seed ortholog is 100%.
Bootstrap support for O84151 as seed ortholog is 100%.