###################################
276 groups of orthologs
279 in-paralogs from C.trachomatis
353 in-paralogs from C.variabilis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 837 bits
Score difference with first non-orthologous sequence - C.trachomatis:837 C.variabilis:540

O84022              	100.00%		E1Z4B5              	100.00%
Bootstrap support for O84022 as seed ortholog is 100%.
Bootstrap support for E1Z4B5 as seed ortholog is 100%.

Group of orthologs #2. Best score 807 bits
Score difference with first non-orthologous sequence - C.trachomatis:807 C.variabilis:692

O84211              	100.00%		E1Z4G4              	100.00%
Bootstrap support for O84211 as seed ortholog is 100%.
Bootstrap support for E1Z4G4 as seed ortholog is 100%.

Group of orthologs #3. Best score 780 bits
Score difference with first non-orthologous sequence - C.trachomatis:780 C.variabilis:344

O84288              	100.00%		E1ZP98              	100.00%
Bootstrap support for O84288 as seed ortholog is 100%.
Bootstrap support for E1ZP98 as seed ortholog is 100%.

Group of orthologs #4. Best score 721 bits
Score difference with first non-orthologous sequence - C.trachomatis:721 C.variabilis:381

O84348              	100.00%		E1Z3L7              	100.00%
Bootstrap support for O84348 as seed ortholog is 100%.
Bootstrap support for E1Z3L7 as seed ortholog is 100%.

Group of orthologs #5. Best score 711 bits
Score difference with first non-orthologous sequence - C.trachomatis:711 C.variabilis:25

P17821              	100.00%		E1ZMD2              	100.00%
Bootstrap support for P17821 as seed ortholog is 100%.
Bootstrap support for E1ZMD2 as seed ortholog is 70%.
Alternative seed ortholog is E1ZE03 (25 bits away from this cluster)

Group of orthologs #6. Best score 710 bits
Score difference with first non-orthologous sequence - C.trachomatis:710 C.variabilis:141

O84444              	100.00%		E1Z223              	100.00%
Bootstrap support for O84444 as seed ortholog is 100%.
Bootstrap support for E1Z223 as seed ortholog is 99%.

Group of orthologs #7. Best score 700 bits
Score difference with first non-orthologous sequence - C.trachomatis:700 C.variabilis:264

O84115              	100.00%		E1ZLG3              	100.00%
                    	       		E1Z691              	5.37%
Bootstrap support for O84115 as seed ortholog is 100%.
Bootstrap support for E1ZLG3 as seed ortholog is 100%.

Group of orthologs #8. Best score 674 bits
Score difference with first non-orthologous sequence - C.trachomatis:674 C.variabilis:429

P0CE09              	100.00%		F2YGL4              	100.00%
Bootstrap support for P0CE09 as seed ortholog is 100%.
Bootstrap support for F2YGL4 as seed ortholog is 100%.

Group of orthologs #9. Best score 622 bits
Score difference with first non-orthologous sequence - C.trachomatis:622 C.variabilis:380

O84304              	100.00%		E1ZQ89              	100.00%
Bootstrap support for O84304 as seed ortholog is 100%.
Bootstrap support for E1ZQ89 as seed ortholog is 100%.

Group of orthologs #10. Best score 584 bits
Score difference with first non-orthologous sequence - C.trachomatis:584 C.variabilis:536

O84690              	100.00%		E1Z2X7              	100.00%
Bootstrap support for O84690 as seed ortholog is 100%.
Bootstrap support for E1Z2X7 as seed ortholog is 100%.

Group of orthologs #11. Best score 566 bits
Score difference with first non-orthologous sequence - C.trachomatis:566 C.variabilis:26

O84067              	100.00%		E1ZSI1              	100.00%
Bootstrap support for O84067 as seed ortholog is 100%.
Bootstrap support for E1ZSI1 as seed ortholog is 71%.
Alternative seed ortholog is E1ZB26 (26 bits away from this cluster)

Group of orthologs #12. Best score 550 bits
Score difference with first non-orthologous sequence - C.trachomatis:550 C.variabilis:550

O84192              	100.00%		E1ZRV4              	100.00%
Bootstrap support for O84192 as seed ortholog is 100%.
Bootstrap support for E1ZRV4 as seed ortholog is 100%.

Group of orthologs #13. Best score 531 bits
Score difference with first non-orthologous sequence - C.trachomatis:531 C.variabilis:108

P0CD73              	100.00%		E1ZAY9              	100.00%
Bootstrap support for P0CD73 as seed ortholog is 100%.
Bootstrap support for E1ZAY9 as seed ortholog is 99%.

Group of orthologs #14. Best score 530 bits
Score difference with first non-orthologous sequence - C.trachomatis:530 C.variabilis:16

P0CD71              	100.00%		F2YGM8              	100.00%
Bootstrap support for P0CD71 as seed ortholog is 100%.
Bootstrap support for F2YGM8 as seed ortholog is 87%.

Group of orthologs #15. Best score 527 bits
Score difference with first non-orthologous sequence - C.trachomatis:238 C.variabilis:211

O84068              	100.00%		E1ZPP6              	100.00%
Bootstrap support for O84068 as seed ortholog is 100%.
Bootstrap support for E1ZPP6 as seed ortholog is 100%.

Group of orthologs #16. Best score 526 bits
Score difference with first non-orthologous sequence - C.trachomatis:345 C.variabilis:45

P0C0Z7              	100.00%		E1ZRQ6              	100.00%
Bootstrap support for P0C0Z7 as seed ortholog is 100%.
Bootstrap support for E1ZRQ6 as seed ortholog is 84%.

Group of orthologs #17. Best score 496 bits
Score difference with first non-orthologous sequence - C.trachomatis:496 C.variabilis:496

O84755              	100.00%		E1ZGR1              	100.00%
Bootstrap support for O84755 as seed ortholog is 100%.
Bootstrap support for E1ZGR1 as seed ortholog is 100%.

Group of orthologs #18. Best score 492 bits
Score difference with first non-orthologous sequence - C.trachomatis:492 C.variabilis:492

O84834              	100.00%		E1ZQX5              	100.00%
Bootstrap support for O84834 as seed ortholog is 100%.
Bootstrap support for E1ZQX5 as seed ortholog is 100%.

Group of orthologs #19. Best score 472 bits
Score difference with first non-orthologous sequence - C.trachomatis:472 C.variabilis:472

O84863              	100.00%		E1Z5J6              	100.00%
Bootstrap support for O84863 as seed ortholog is 100%.
Bootstrap support for E1Z5J6 as seed ortholog is 100%.

Group of orthologs #20. Best score 468 bits
Score difference with first non-orthologous sequence - C.trachomatis:468 C.variabilis:73

O84775              	100.00%		E1ZQQ3              	100.00%
Bootstrap support for O84775 as seed ortholog is 100%.
Bootstrap support for E1ZQQ3 as seed ortholog is 97%.

Group of orthologs #21. Best score 460 bits
Score difference with first non-orthologous sequence - C.trachomatis:460 C.variabilis:326

O84546              	100.00%		E1ZEJ9              	100.00%
Bootstrap support for O84546 as seed ortholog is 100%.
Bootstrap support for E1ZEJ9 as seed ortholog is 100%.

Group of orthologs #22. Best score 457 bits
Score difference with first non-orthologous sequence - C.trachomatis:457 C.variabilis:457

O84250              	100.00%		E1ZPG3              	100.00%
Bootstrap support for O84250 as seed ortholog is 100%.
Bootstrap support for E1ZPG3 as seed ortholog is 100%.

Group of orthologs #23. Best score 450 bits
Score difference with first non-orthologous sequence - C.trachomatis:450 C.variabilis:450

P0CE22              	100.00%		E1Z7B1              	100.00%
Bootstrap support for P0CE22 as seed ortholog is 100%.
Bootstrap support for E1Z7B1 as seed ortholog is 100%.

Group of orthologs #24. Best score 450 bits
Score difference with first non-orthologous sequence - C.trachomatis:218 C.variabilis:450

O84193              	100.00%		E1ZJR5              	100.00%
Bootstrap support for O84193 as seed ortholog is 99%.
Bootstrap support for E1ZJR5 as seed ortholog is 100%.

Group of orthologs #25. Best score 443 bits
Score difference with first non-orthologous sequence - C.trachomatis:443 C.variabilis:443

O84460              	100.00%		E1ZM20              	100.00%
Bootstrap support for O84460 as seed ortholog is 100%.
Bootstrap support for E1ZM20 as seed ortholog is 100%.

Group of orthologs #26. Best score 435 bits
Score difference with first non-orthologous sequence - C.trachomatis:435 C.variabilis:435

O84046              	100.00%		E1ZJ21              	100.00%
Bootstrap support for O84046 as seed ortholog is 100%.
Bootstrap support for E1ZJ21 as seed ortholog is 100%.

Group of orthologs #27. Best score 419 bits
Score difference with first non-orthologous sequence - C.trachomatis:419 C.variabilis:419

Q59321              	100.00%		E1ZPY4              	100.00%
Bootstrap support for Q59321 as seed ortholog is 100%.
Bootstrap support for E1ZPY4 as seed ortholog is 100%.

Group of orthologs #28. Best score 408 bits
Score difference with first non-orthologous sequence - C.trachomatis:408 C.variabilis:408

O84849              	100.00%		E1ZIU8              	100.00%
Bootstrap support for O84849 as seed ortholog is 100%.
Bootstrap support for E1ZIU8 as seed ortholog is 100%.

Group of orthologs #29. Best score 406 bits
Score difference with first non-orthologous sequence - C.trachomatis:406 C.variabilis:22

O84585              	100.00%		E1ZPD1              	100.00%
Bootstrap support for O84585 as seed ortholog is 100%.
Bootstrap support for E1ZPD1 as seed ortholog is 65%.
Alternative seed ortholog is E1ZQV4 (22 bits away from this cluster)

Group of orthologs #30. Best score 405 bits
Score difference with first non-orthologous sequence - C.trachomatis:405 C.variabilis:405

O84831              	100.00%		E1ZQ02              	100.00%
Bootstrap support for O84831 as seed ortholog is 100%.
Bootstrap support for E1ZQ02 as seed ortholog is 100%.

Group of orthologs #31. Best score 403 bits
Score difference with first non-orthologous sequence - C.trachomatis:403 C.variabilis:403

O84207              	100.00%		E1ZRS2              	100.00%
                    	       		E1Z7F5              	34.43%
Bootstrap support for O84207 as seed ortholog is 100%.
Bootstrap support for E1ZRS2 as seed ortholog is 100%.

Group of orthologs #32. Best score 391 bits
Score difference with first non-orthologous sequence - C.trachomatis:12 C.variabilis:391

O84210              	100.00%		E1Z874              	100.00%
Bootstrap support for O84210 as seed ortholog is 60%.
Alternative seed ortholog is O84208 (12 bits away from this cluster)
Bootstrap support for E1Z874 as seed ortholog is 100%.

Group of orthologs #33. Best score 389 bits
Score difference with first non-orthologous sequence - C.trachomatis:389 C.variabilis:389

O84316              	100.00%		F2YGL2              	100.00%
Bootstrap support for O84316 as seed ortholog is 100%.
Bootstrap support for F2YGL2 as seed ortholog is 100%.

Group of orthologs #34. Best score 387 bits
Score difference with first non-orthologous sequence - C.trachomatis:387 C.variabilis:25

O84126              	100.00%		E1ZT48              	100.00%
Bootstrap support for O84126 as seed ortholog is 100%.
Bootstrap support for E1ZT48 as seed ortholog is 83%.

Group of orthologs #35. Best score 379 bits
Score difference with first non-orthologous sequence - C.trachomatis:379 C.variabilis:379

O84057              	100.00%		E1ZAL3              	100.00%
Bootstrap support for O84057 as seed ortholog is 100%.
Bootstrap support for E1ZAL3 as seed ortholog is 100%.

Group of orthologs #36. Best score 375 bits
Score difference with first non-orthologous sequence - C.trachomatis:375 C.variabilis:324

O84106              	100.00%		E1Z2Y2              	100.00%
Bootstrap support for O84106 as seed ortholog is 100%.
Bootstrap support for E1Z2Y2 as seed ortholog is 100%.

Group of orthologs #37. Best score 373 bits
Score difference with first non-orthologous sequence - C.trachomatis:373 C.variabilis:373

O84060              	100.00%		E1ZCS3              	100.00%
Bootstrap support for O84060 as seed ortholog is 100%.
Bootstrap support for E1ZCS3 as seed ortholog is 100%.

Group of orthologs #38. Best score 372 bits
Score difference with first non-orthologous sequence - C.trachomatis:372 C.variabilis:274

O84172              	100.00%		E1ZQ91              	100.00%
Bootstrap support for O84172 as seed ortholog is 100%.
Bootstrap support for E1ZQ91 as seed ortholog is 100%.

Group of orthologs #39. Best score 366 bits
Score difference with first non-orthologous sequence - C.trachomatis:366 C.variabilis:366

O84310              	100.00%		E1ZT42              	100.00%
Bootstrap support for O84310 as seed ortholog is 100%.
Bootstrap support for E1ZT42 as seed ortholog is 100%.

Group of orthologs #40. Best score 364 bits
Score difference with first non-orthologous sequence - C.trachomatis:364 C.variabilis:114

P0CE13              	100.00%		E1ZKK0              	100.00%
                    	       		E1Z4G5              	33.11%
Bootstrap support for P0CE13 as seed ortholog is 100%.
Bootstrap support for E1ZKK0 as seed ortholog is 99%.

Group of orthologs #41. Best score 364 bits
Score difference with first non-orthologous sequence - C.trachomatis:310 C.variabilis:364

O84335              	100.00%		E1ZQR7              	100.00%
Bootstrap support for O84335 as seed ortholog is 100%.
Bootstrap support for E1ZQR7 as seed ortholog is 100%.

Group of orthologs #42. Best score 358 bits
Score difference with first non-orthologous sequence - C.trachomatis:358 C.variabilis:358

O84848              	100.00%		E1ZBG0              	100.00%
Bootstrap support for O84848 as seed ortholog is 100%.
Bootstrap support for E1ZBG0 as seed ortholog is 100%.

Group of orthologs #43. Best score 352 bits
Score difference with first non-orthologous sequence - C.trachomatis:352 C.variabilis:352

O84007              	100.00%		E1Z6Q0              	100.00%
Bootstrap support for O84007 as seed ortholog is 100%.
Bootstrap support for E1Z6Q0 as seed ortholog is 100%.

Group of orthologs #44. Best score 351 bits
Score difference with first non-orthologous sequence - C.trachomatis:351 C.variabilis:220

O84006              	100.00%		E1ZQQ8              	100.00%
Bootstrap support for O84006 as seed ortholog is 100%.
Bootstrap support for E1ZQQ8 as seed ortholog is 100%.

Group of orthologs #45. Best score 348 bits
Score difference with first non-orthologous sequence - C.trachomatis:348 C.variabilis:348

O84829              	100.00%		E1ZS72              	100.00%
Bootstrap support for O84829 as seed ortholog is 100%.
Bootstrap support for E1ZS72 as seed ortholog is 100%.

Group of orthologs #46. Best score 344 bits
Score difference with first non-orthologous sequence - C.trachomatis:344 C.variabilis:200

O84098              	100.00%		E1ZFJ9              	100.00%
Bootstrap support for O84098 as seed ortholog is 100%.
Bootstrap support for E1ZFJ9 as seed ortholog is 99%.

Group of orthologs #47. Best score 344 bits
Score difference with first non-orthologous sequence - C.trachomatis:344 C.variabilis:78

O84707              	100.00%		E1ZPM2              	100.00%
Bootstrap support for O84707 as seed ortholog is 100%.
Bootstrap support for E1ZPM2 as seed ortholog is 98%.

Group of orthologs #48. Best score 341 bits
Score difference with first non-orthologous sequence - C.trachomatis:341 C.variabilis:341

P0CD78              	100.00%		E1Z453              	100.00%
                    	       		E1Z5A0              	43.78%
Bootstrap support for P0CD78 as seed ortholog is 100%.
Bootstrap support for E1Z453 as seed ortholog is 100%.

Group of orthologs #49. Best score 340 bits
Score difference with first non-orthologous sequence - C.trachomatis:340 C.variabilis:235

O84649              	100.00%		E1ZDW6              	100.00%
Bootstrap support for O84649 as seed ortholog is 100%.
Bootstrap support for E1ZDW6 as seed ortholog is 100%.

Group of orthologs #50. Best score 335 bits
Score difference with first non-orthologous sequence - C.trachomatis:335 C.variabilis:89

O84094              	100.00%		E1ZJW4              	100.00%
Bootstrap support for O84094 as seed ortholog is 100%.
Bootstrap support for E1ZJW4 as seed ortholog is 99%.

Group of orthologs #51. Best score 332 bits
Score difference with first non-orthologous sequence - C.trachomatis:332 C.variabilis:112

O84196              	100.00%		E1Z6C2              	100.00%
Bootstrap support for O84196 as seed ortholog is 100%.
Bootstrap support for E1Z6C2 as seed ortholog is 99%.

Group of orthologs #52. Best score 331 bits
Score difference with first non-orthologous sequence - C.trachomatis:331 C.variabilis:245

O84786              	100.00%		E1ZE21              	100.00%
Bootstrap support for O84786 as seed ortholog is 100%.
Bootstrap support for E1ZE21 as seed ortholog is 100%.

Group of orthologs #53. Best score 331 bits
Score difference with first non-orthologous sequence - C.trachomatis:331 C.variabilis:331

O84736              	100.00%		E1ZGD3              	100.00%
Bootstrap support for O84736 as seed ortholog is 100%.
Bootstrap support for E1ZGD3 as seed ortholog is 100%.

Group of orthologs #54. Best score 327 bits
Score difference with first non-orthologous sequence - C.trachomatis:327 C.variabilis:30

O84101              	100.00%		E1Z7E9              	100.00%
Bootstrap support for O84101 as seed ortholog is 100%.
Bootstrap support for E1Z7E9 as seed ortholog is 82%.

Group of orthologs #55. Best score 326 bits
Score difference with first non-orthologous sequence - C.trachomatis:326 C.variabilis:57

O84248              	100.00%		E1ZJ58              	100.00%
Bootstrap support for O84248 as seed ortholog is 100%.
Bootstrap support for E1ZJ58 as seed ortholog is 96%.

Group of orthologs #56. Best score 320 bits
Score difference with first non-orthologous sequence - C.trachomatis:320 C.variabilis:99

O84561              	100.00%		E1ZQV8              	100.00%
Bootstrap support for O84561 as seed ortholog is 100%.
Bootstrap support for E1ZQV8 as seed ortholog is 99%.

Group of orthologs #57. Best score 317 bits
Score difference with first non-orthologous sequence - C.trachomatis:317 C.variabilis:317

O84300              	100.00%		E1ZBU2              	100.00%
Bootstrap support for O84300 as seed ortholog is 100%.
Bootstrap support for E1ZBU2 as seed ortholog is 100%.

Group of orthologs #58. Best score 307 bits
Score difference with first non-orthologous sequence - C.trachomatis:307 C.variabilis:99

O84732              	100.00%		E1ZLJ1              	100.00%
Bootstrap support for O84732 as seed ortholog is 100%.
Bootstrap support for E1ZLJ1 as seed ortholog is 98%.

Group of orthologs #59. Best score 307 bits
Score difference with first non-orthologous sequence - C.trachomatis:307 C.variabilis:246

O84548              	100.00%		E1ZT34              	100.00%
Bootstrap support for O84548 as seed ortholog is 100%.
Bootstrap support for E1ZT34 as seed ortholog is 100%.

Group of orthologs #60. Best score 298 bits
Score difference with first non-orthologous sequence - C.trachomatis:298 C.variabilis:298

O84188              	100.00%		E1ZGF1              	100.00%
                    	       		E1ZKL7              	17.71%
Bootstrap support for O84188 as seed ortholog is 100%.
Bootstrap support for E1ZGF1 as seed ortholog is 100%.

Group of orthologs #61. Best score 287 bits
Score difference with first non-orthologous sequence - C.trachomatis:287 C.variabilis:92

O84383              	100.00%		E1ZKE5              	100.00%
Bootstrap support for O84383 as seed ortholog is 100%.
Bootstrap support for E1ZKE5 as seed ortholog is 99%.

Group of orthologs #62. Best score 286 bits
Score difference with first non-orthologous sequence - C.trachomatis:286 C.variabilis:56

O84381              	100.00%		E1Z366              	100.00%
Bootstrap support for O84381 as seed ortholog is 100%.
Bootstrap support for E1Z366 as seed ortholog is 94%.

Group of orthologs #63. Best score 284 bits
Score difference with first non-orthologous sequence - C.trachomatis:284 C.variabilis:284

O84451              	100.00%		E1ZGZ9              	100.00%
Bootstrap support for O84451 as seed ortholog is 100%.
Bootstrap support for E1ZGZ9 as seed ortholog is 100%.

Group of orthologs #64. Best score 281 bits
Score difference with first non-orthologous sequence - C.trachomatis:281 C.variabilis:281

O84787              	100.00%		E1ZLU6              	100.00%
Bootstrap support for O84787 as seed ortholog is 100%.
Bootstrap support for E1ZLU6 as seed ortholog is 100%.

Group of orthologs #65. Best score 279 bits
Score difference with first non-orthologous sequence - C.trachomatis:279 C.variabilis:279

O84074              	100.00%		E1Z6V5              	100.00%
Bootstrap support for O84074 as seed ortholog is 100%.
Bootstrap support for E1Z6V5 as seed ortholog is 100%.

Group of orthologs #66. Best score 278 bits
Score difference with first non-orthologous sequence - C.trachomatis:278 C.variabilis:278

O84026              	100.00%		E1ZL88              	100.00%
Bootstrap support for O84026 as seed ortholog is 100%.
Bootstrap support for E1ZL88 as seed ortholog is 100%.

Group of orthologs #67. Best score 277 bits
Score difference with first non-orthologous sequence - C.trachomatis:277 C.variabilis:277

P0CD72              	100.00%		E1ZJE0              	100.00%
                    	       		E1Z520              	35.40%
Bootstrap support for P0CD72 as seed ortholog is 100%.
Bootstrap support for E1ZJE0 as seed ortholog is 100%.

Group of orthologs #68. Best score 277 bits
Score difference with first non-orthologous sequence - C.trachomatis:277 C.variabilis:141

O84212              	100.00%		E1ZQL8              	100.00%
Bootstrap support for O84212 as seed ortholog is 100%.
Bootstrap support for E1ZQL8 as seed ortholog is 99%.

Group of orthologs #69. Best score 276 bits
Score difference with first non-orthologous sequence - C.trachomatis:138 C.variabilis:134

O84249              	100.00%		E1Z4P6              	100.00%
                    	       		E1Z2X6              	7.08%
Bootstrap support for O84249 as seed ortholog is 99%.
Bootstrap support for E1Z4P6 as seed ortholog is 99%.

Group of orthologs #70. Best score 275 bits
Score difference with first non-orthologous sequence - C.trachomatis:275 C.variabilis:275

O84754              	100.00%		E1ZA66              	100.00%
Bootstrap support for O84754 as seed ortholog is 100%.
Bootstrap support for E1ZA66 as seed ortholog is 100%.

Group of orthologs #71. Best score 271 bits
Score difference with first non-orthologous sequence - C.trachomatis:271 C.variabilis:216

O84496              	100.00%		E1ZTI5              	100.00%
                    	       		E1Z2N8              	9.84%
Bootstrap support for O84496 as seed ortholog is 100%.
Bootstrap support for E1ZTI5 as seed ortholog is 100%.

Group of orthologs #72. Best score 269 bits
Score difference with first non-orthologous sequence - C.trachomatis:269 C.variabilis:187

O84693              	100.00%		E1Z8I3              	100.00%
Bootstrap support for O84693 as seed ortholog is 100%.
Bootstrap support for E1Z8I3 as seed ortholog is 100%.

Group of orthologs #73. Best score 268 bits
Score difference with first non-orthologous sequence - C.trachomatis:268 C.variabilis:268

O84267              	100.00%		E1ZJK9              	100.00%
Bootstrap support for O84267 as seed ortholog is 100%.
Bootstrap support for E1ZJK9 as seed ortholog is 100%.

Group of orthologs #74. Best score 267 bits
Score difference with first non-orthologous sequence - C.trachomatis:267 C.variabilis:267

O84465              	100.00%		E1Z297              	100.00%
Bootstrap support for O84465 as seed ortholog is 100%.
Bootstrap support for E1Z297 as seed ortholog is 100%.

Group of orthologs #75. Best score 267 bits
Score difference with first non-orthologous sequence - C.trachomatis:267 C.variabilis:36

O84530              	100.00%		F2YGN3              	100.00%
Bootstrap support for O84530 as seed ortholog is 100%.
Bootstrap support for F2YGN3 as seed ortholog is 88%.

Group of orthologs #76. Best score 265 bits
Score difference with first non-orthologous sequence - C.trachomatis:265 C.variabilis:82

O84345              	100.00%		E1ZQY5              	100.00%
Bootstrap support for O84345 as seed ortholog is 100%.
Bootstrap support for E1ZQY5 as seed ortholog is 80%.

Group of orthologs #77. Best score 263 bits
Score difference with first non-orthologous sequence - C.trachomatis:263 C.variabilis:263

O84638              	100.00%		E1ZLA4              	100.00%
Bootstrap support for O84638 as seed ortholog is 100%.
Bootstrap support for E1ZLA4 as seed ortholog is 100%.

Group of orthologs #78. Best score 262 bits
Score difference with first non-orthologous sequence - C.trachomatis:262 C.variabilis:262

O84698              	100.00%		E1ZTD6              	100.00%
                    	       		E1ZTD5              	90.64%
                    	       		E1Z2A3              	28.31%
                    	       		E1ZTD3              	8.18%
Bootstrap support for O84698 as seed ortholog is 100%.
Bootstrap support for E1ZTD6 as seed ortholog is 100%.

Group of orthologs #79. Best score 262 bits
Score difference with first non-orthologous sequence - C.trachomatis:262 C.variabilis:262

O84373              	100.00%		E1ZRW2              	100.00%
Bootstrap support for O84373 as seed ortholog is 100%.
Bootstrap support for E1ZRW2 as seed ortholog is 100%.

Group of orthologs #80. Best score 261 bits
Score difference with first non-orthologous sequence - C.trachomatis:261 C.variabilis:261

O84065              	100.00%		E1ZD92              	100.00%
Bootstrap support for O84065 as seed ortholog is 100%.
Bootstrap support for E1ZD92 as seed ortholog is 100%.

Group of orthologs #81. Best score 254 bits
Score difference with first non-orthologous sequence - C.trachomatis:126 C.variabilis:105

O84058              	100.00%		E1Z629              	100.00%
Bootstrap support for O84058 as seed ortholog is 99%.
Bootstrap support for E1Z629 as seed ortholog is 99%.

Group of orthologs #82. Best score 248 bits
Score difference with first non-orthologous sequence - C.trachomatis:248 C.variabilis:94

P0CE21              	100.00%		E1Z7Q4              	100.00%
                    	       		E1Z630              	9.62%
Bootstrap support for P0CE21 as seed ortholog is 100%.
Bootstrap support for E1Z7Q4 as seed ortholog is 98%.

Group of orthologs #83. Best score 247 bits
Score difference with first non-orthologous sequence - C.trachomatis:247 C.variabilis:247

O84439              	100.00%		E1Z3F6              	100.00%
                    	       		E1ZT16              	33.33%
                    	       		E1ZGE0              	23.54%
Bootstrap support for O84439 as seed ortholog is 100%.
Bootstrap support for E1Z3F6 as seed ortholog is 100%.

Group of orthologs #84. Best score 244 bits
Score difference with first non-orthologous sequence - C.trachomatis:244 C.variabilis:82

O84734              	100.00%		E1Z4U0              	100.00%
Bootstrap support for O84734 as seed ortholog is 100%.
Bootstrap support for E1Z4U0 as seed ortholog is 95%.

Group of orthologs #85. Best score 241 bits
Score difference with first non-orthologous sequence - C.trachomatis:241 C.variabilis:70

O84704              	100.00%		E1Z667              	100.00%
Bootstrap support for O84704 as seed ortholog is 100%.
Bootstrap support for E1Z667 as seed ortholog is 91%.

Group of orthologs #86. Best score 240 bits
Score difference with first non-orthologous sequence - C.trachomatis:240 C.variabilis:45

O84423              	100.00%		E1Z838              	100.00%
Bootstrap support for O84423 as seed ortholog is 100%.
Bootstrap support for E1Z838 as seed ortholog is 97%.

Group of orthologs #87. Best score 240 bits
Score difference with first non-orthologous sequence - C.trachomatis:240 C.variabilis:240

O84295              	100.00%		F2YGI4              	100.00%
Bootstrap support for O84295 as seed ortholog is 100%.
Bootstrap support for F2YGI4 as seed ortholog is 100%.

Group of orthologs #88. Best score 237 bits
Score difference with first non-orthologous sequence - C.trachomatis:237 C.variabilis:87

O84315              	100.00%		E1ZTC4              	100.00%
Bootstrap support for O84315 as seed ortholog is 100%.
Bootstrap support for E1ZTC4 as seed ortholog is 99%.

Group of orthologs #89. Best score 234 bits
Score difference with first non-orthologous sequence - C.trachomatis:234 C.variabilis:11

O84797              	100.00%		E1Z4P1              	100.00%
Bootstrap support for O84797 as seed ortholog is 100%.
Bootstrap support for E1Z4P1 as seed ortholog is 52%.
Alternative seed ortholog is E1ZBP1 (11 bits away from this cluster)

Group of orthologs #90. Best score 233 bits
Score difference with first non-orthologous sequence - C.trachomatis:233 C.variabilis:233

O84242              	100.00%		E1ZFD0              	100.00%
Bootstrap support for O84242 as seed ortholog is 100%.
Bootstrap support for E1ZFD0 as seed ortholog is 100%.

Group of orthologs #91. Best score 233 bits
Score difference with first non-orthologous sequence - C.trachomatis:233 C.variabilis:3

O84352              	100.00%		E1ZSJ4              	100.00%
Bootstrap support for O84352 as seed ortholog is 100%.
Bootstrap support for E1ZSJ4 as seed ortholog is 54%.
Alternative seed ortholog is E1ZQ41 (3 bits away from this cluster)

Group of orthologs #92. Best score 230 bits
Score difference with first non-orthologous sequence - C.trachomatis:230 C.variabilis:230

O84613              	100.00%		E1Z7W5              	100.00%
Bootstrap support for O84613 as seed ortholog is 100%.
Bootstrap support for E1Z7W5 as seed ortholog is 100%.

Group of orthologs #93. Best score 229 bits
Score difference with first non-orthologous sequence - C.trachomatis:229 C.variabilis:48

O84289              	100.00%		E1ZF29              	100.00%
Bootstrap support for O84289 as seed ortholog is 100%.
Bootstrap support for E1ZF29 as seed ortholog is 84%.

Group of orthologs #94. Best score 228 bits
Score difference with first non-orthologous sequence - C.trachomatis:228 C.variabilis:228

O84049              	100.00%		E1Z575              	100.00%
Bootstrap support for O84049 as seed ortholog is 100%.
Bootstrap support for E1Z575 as seed ortholog is 100%.

Group of orthologs #95. Best score 228 bits
Score difference with first non-orthologous sequence - C.trachomatis:228 C.variabilis:81

O84296              	100.00%		E1Z7T8              	100.00%
Bootstrap support for O84296 as seed ortholog is 100%.
Bootstrap support for E1Z7T8 as seed ortholog is 99%.

Group of orthologs #96. Best score 228 bits
Score difference with first non-orthologous sequence - C.trachomatis:228 C.variabilis:14

O84028              	100.00%		E1ZC53              	100.00%
Bootstrap support for O84028 as seed ortholog is 100%.
Bootstrap support for E1ZC53 as seed ortholog is 54%.
Alternative seed ortholog is E1ZJC4 (14 bits away from this cluster)

Group of orthologs #97. Best score 223 bits
Score difference with first non-orthologous sequence - C.trachomatis:223 C.variabilis:223

O84642              	100.00%		E1ZR15              	100.00%
                    	       		E1Z4T9              	36.91%
Bootstrap support for O84642 as seed ortholog is 100%.
Bootstrap support for E1ZR15 as seed ortholog is 100%.

Group of orthologs #98. Best score 221 bits
Score difference with first non-orthologous sequence - C.trachomatis:221 C.variabilis:61

O84804              	100.00%		E1ZK91              	100.00%
                    	       		E1ZGA0              	10.40%
Bootstrap support for O84804 as seed ortholog is 100%.
Bootstrap support for E1ZK91 as seed ortholog is 86%.

Group of orthologs #99. Best score 221 bits
Score difference with first non-orthologous sequence - C.trachomatis:221 C.variabilis:221

O84859              	100.00%		E1Z9A2              	100.00%
Bootstrap support for O84859 as seed ortholog is 100%.
Bootstrap support for E1Z9A2 as seed ortholog is 100%.

Group of orthologs #100. Best score 220 bits
Score difference with first non-orthologous sequence - C.trachomatis:220 C.variabilis:220

O84360              	100.00%		E1ZDI4              	100.00%
Bootstrap support for O84360 as seed ortholog is 100%.
Bootstrap support for E1ZDI4 as seed ortholog is 100%.

Group of orthologs #101. Best score 216 bits
Score difference with first non-orthologous sequence - C.trachomatis:216 C.variabilis:216

O84081              	100.00%		E1ZFI7              	100.00%
                    	       		E1Z6M5              	9.29%
Bootstrap support for O84081 as seed ortholog is 100%.
Bootstrap support for E1ZFI7 as seed ortholog is 100%.

Group of orthologs #102. Best score 214 bits
Score difference with first non-orthologous sequence - C.trachomatis:214 C.variabilis:214

O84562              	100.00%		E1ZH10              	100.00%
                    	       		E1ZCK3              	14.34%
Bootstrap support for O84562 as seed ortholog is 100%.
Bootstrap support for E1ZH10 as seed ortholog is 100%.

Group of orthologs #103. Best score 214 bits
Score difference with first non-orthologous sequence - C.trachomatis:214 C.variabilis:214

O84823              	100.00%		E1ZKU7              	100.00%
Bootstrap support for O84823 as seed ortholog is 100%.
Bootstrap support for E1ZKU7 as seed ortholog is 100%.

Group of orthologs #104. Best score 211 bits
Score difference with first non-orthologous sequence - C.trachomatis:72 C.variabilis:13

O84712              	100.00%		E1ZCZ6              	100.00%
Bootstrap support for O84712 as seed ortholog is 99%.
Bootstrap support for E1ZCZ6 as seed ortholog is 72%.
Alternative seed ortholog is E1ZT51 (13 bits away from this cluster)

Group of orthologs #105. Best score 210 bits
Score difference with first non-orthologous sequence - C.trachomatis:210 C.variabilis:210

O84036              	100.00%		E1ZII7              	100.00%
Bootstrap support for O84036 as seed ortholog is 100%.
Bootstrap support for E1ZII7 as seed ortholog is 100%.

Group of orthologs #106. Best score 207 bits
Score difference with first non-orthologous sequence - C.trachomatis:207 C.variabilis:207

O84404              	100.00%		E1ZJJ3              	100.00%
Bootstrap support for O84404 as seed ortholog is 100%.
Bootstrap support for E1ZJJ3 as seed ortholog is 100%.

Group of orthologs #107. Best score 206 bits
Score difference with first non-orthologous sequence - C.trachomatis:206 C.variabilis:206

O84632              	100.00%		E1Z6F5              	100.00%
Bootstrap support for O84632 as seed ortholog is 100%.
Bootstrap support for E1Z6F5 as seed ortholog is 100%.

Group of orthologs #108. Best score 206 bits
Score difference with first non-orthologous sequence - C.trachomatis:206 C.variabilis:206

P28539              	100.00%		E1Z729              	100.00%
Bootstrap support for P28539 as seed ortholog is 100%.
Bootstrap support for E1Z729 as seed ortholog is 100%.

Group of orthologs #109. Best score 203 bits
Score difference with first non-orthologous sequence - C.trachomatis:159 C.variabilis:137

O84691              	100.00%		E1ZRT2              	100.00%
Bootstrap support for O84691 as seed ortholog is 100%.
Bootstrap support for E1ZRT2 as seed ortholog is 99%.

Group of orthologs #110. Best score 201 bits
Score difference with first non-orthologous sequence - C.trachomatis:201 C.variabilis:201

P0CD75              	100.00%		E1ZT57              	100.00%
Bootstrap support for P0CD75 as seed ortholog is 100%.
Bootstrap support for E1ZT57 as seed ortholog is 100%.

Group of orthologs #111. Best score 197 bits
Score difference with first non-orthologous sequence - C.trachomatis:197 C.variabilis:4

O84320              	100.00%		E1ZI88              	100.00%
Bootstrap support for O84320 as seed ortholog is 100%.
Bootstrap support for E1ZI88 as seed ortholog is 40%.
Alternative seed ortholog is E1ZRS5 (4 bits away from this cluster)

Group of orthologs #112. Best score 196 bits
Score difference with first non-orthologous sequence - C.trachomatis:196 C.variabilis:196

O84274              	100.00%		E1ZBG6              	100.00%
Bootstrap support for O84274 as seed ortholog is 100%.
Bootstrap support for E1ZBG6 as seed ortholog is 100%.

Group of orthologs #113. Best score 196 bits
Score difference with first non-orthologous sequence - C.trachomatis:196 C.variabilis:196

O84297              	100.00%		E1ZGQ3              	100.00%
Bootstrap support for O84297 as seed ortholog is 100%.
Bootstrap support for E1ZGQ3 as seed ortholog is 100%.

Group of orthologs #114. Best score 195 bits
Score difference with first non-orthologous sequence - C.trachomatis:195 C.variabilis:39

P38004              	100.00%		E1ZFR4              	100.00%
Bootstrap support for P38004 as seed ortholog is 100%.
Bootstrap support for E1ZFR4 as seed ortholog is 90%.

Group of orthologs #115. Best score 193 bits
Score difference with first non-orthologous sequence - C.trachomatis:193 C.variabilis:5

O84266              	100.00%		E1ZIU0              	100.00%
                    	       		E1ZNE0              	33.72%
                    	       		E1ZNG0              	16.55%
                    	       		E1ZJD1              	12.61%
Bootstrap support for O84266 as seed ortholog is 100%.
Bootstrap support for E1ZIU0 as seed ortholog is 87%.

Group of orthologs #116. Best score 192 bits
Score difference with first non-orthologous sequence - C.trachomatis:192 C.variabilis:192

O84032              	100.00%		E1ZF14              	100.00%
Bootstrap support for O84032 as seed ortholog is 100%.
Bootstrap support for E1ZF14 as seed ortholog is 100%.

Group of orthologs #117. Best score 191 bits
Score difference with first non-orthologous sequence - C.trachomatis:191 C.variabilis:107

O84608              	100.00%		E1ZG17              	100.00%
                    	       		E1ZR08              	9.33%
Bootstrap support for O84608 as seed ortholog is 100%.
Bootstrap support for E1ZG17 as seed ortholog is 99%.

Group of orthologs #118. Best score 188 bits
Score difference with first non-orthologous sequence - C.trachomatis:188 C.variabilis:45

O84247              	100.00%		E1ZKW6              	100.00%
                    	       		E1ZKJ2              	5.33%
Bootstrap support for O84247 as seed ortholog is 100%.
Bootstrap support for E1ZKW6 as seed ortholog is 90%.

Group of orthologs #119. Best score 185 bits
Score difference with first non-orthologous sequence - C.trachomatis:185 C.variabilis:185

O84332              	100.00%		E1ZKB3              	100.00%
                    	       		E1ZJ95              	32.71%
Bootstrap support for O84332 as seed ortholog is 100%.
Bootstrap support for E1ZKB3 as seed ortholog is 100%.

Group of orthologs #120. Best score 185 bits
Score difference with first non-orthologous sequence - C.trachomatis:185 C.variabilis:138

O84687              	100.00%		F2YGQ5              	100.00%
Bootstrap support for O84687 as seed ortholog is 100%.
Bootstrap support for F2YGQ5 as seed ortholog is 99%.

Group of orthologs #121. Best score 184 bits
Score difference with first non-orthologous sequence - C.trachomatis:184 C.variabilis:93

O84200              	100.00%		E1ZLH0              	100.00%
Bootstrap support for O84200 as seed ortholog is 100%.
Bootstrap support for E1ZLH0 as seed ortholog is 99%.

Group of orthologs #122. Best score 184 bits
Score difference with first non-orthologous sequence - C.trachomatis:184 C.variabilis:184

O84619              	100.00%		E1ZTH9              	100.00%
Bootstrap support for O84619 as seed ortholog is 100%.
Bootstrap support for E1ZTH9 as seed ortholog is 100%.

Group of orthologs #123. Best score 177 bits
Score difference with first non-orthologous sequence - C.trachomatis:116 C.variabilis:177

P0CD74              	100.00%		E1ZN63              	100.00%
Bootstrap support for P0CD74 as seed ortholog is 99%.
Bootstrap support for E1ZN63 as seed ortholog is 100%.

Group of orthologs #124. Best score 176 bits
Score difference with first non-orthologous sequence - C.trachomatis:176 C.variabilis:86

O84478              	100.00%		E1Z4S2              	100.00%
                    	       		E1Z578              	6.03%
Bootstrap support for O84478 as seed ortholog is 100%.
Bootstrap support for E1Z4S2 as seed ortholog is 99%.

Group of orthologs #125. Best score 176 bits
Score difference with first non-orthologous sequence - C.trachomatis:176 C.variabilis:36

O84719              	100.00%		E1Z733              	100.00%
Bootstrap support for O84719 as seed ortholog is 100%.
Bootstrap support for E1Z733 as seed ortholog is 84%.

Group of orthologs #126. Best score 176 bits
Score difference with first non-orthologous sequence - C.trachomatis:176 C.variabilis:124

O84828              	100.00%		E1ZR65              	100.00%
Bootstrap support for O84828 as seed ortholog is 100%.
Bootstrap support for E1ZR65 as seed ortholog is 99%.

Group of orthologs #127. Best score 176 bits
Score difference with first non-orthologous sequence - C.trachomatis:176 C.variabilis:127

P66370              	100.00%		F2YGM6              	100.00%
Bootstrap support for P66370 as seed ortholog is 100%.
Bootstrap support for F2YGM6 as seed ortholog is 100%.

Group of orthologs #128. Best score 172 bits
Score difference with first non-orthologous sequence - C.trachomatis:172 C.variabilis:172

P18584              	100.00%		E1ZFM0              	100.00%
                    	       		E1ZD03              	30.21%
                    	       		E1ZLP8              	7.07%
Bootstrap support for P18584 as seed ortholog is 100%.
Bootstrap support for E1ZFM0 as seed ortholog is 100%.

Group of orthologs #129. Best score 172 bits
Score difference with first non-orthologous sequence - C.trachomatis:172 C.variabilis:172

O84035              	100.00%		E1ZHF6              	100.00%
Bootstrap support for O84035 as seed ortholog is 100%.
Bootstrap support for E1ZHF6 as seed ortholog is 100%.

Group of orthologs #130. Best score 171 bits
Score difference with first non-orthologous sequence - C.trachomatis:171 C.variabilis:40

O84709              	100.00%		E1ZS07              	100.00%
Bootstrap support for O84709 as seed ortholog is 100%.
Bootstrap support for E1ZS07 as seed ortholog is 62%.
Alternative seed ortholog is E1ZD60 (40 bits away from this cluster)

Group of orthologs #131. Best score 166 bits
Score difference with first non-orthologous sequence - C.trachomatis:166 C.variabilis:166

O84827              	100.00%		E1ZPR0              	100.00%
Bootstrap support for O84827 as seed ortholog is 100%.
Bootstrap support for E1ZPR0 as seed ortholog is 100%.

Group of orthologs #132. Best score 165 bits
Score difference with first non-orthologous sequence - C.trachomatis:57 C.variabilis:165

O84055              	100.00%		E1ZNS1              	100.00%
Bootstrap support for O84055 as seed ortholog is 93%.
Bootstrap support for E1ZNS1 as seed ortholog is 100%.

Group of orthologs #133. Best score 163 bits
Score difference with first non-orthologous sequence - C.trachomatis:163 C.variabilis:163

O84591              	100.00%		E1ZKS0              	100.00%
Bootstrap support for O84591 as seed ortholog is 100%.
Bootstrap support for E1ZKS0 as seed ortholog is 100%.

Group of orthologs #134. Best score 163 bits
Score difference with first non-orthologous sequence - C.trachomatis:163 C.variabilis:163

O84321              	100.00%		E1ZMN5              	100.00%
Bootstrap support for O84321 as seed ortholog is 100%.
Bootstrap support for E1ZMN5 as seed ortholog is 100%.

Group of orthologs #135. Best score 162 bits
Score difference with first non-orthologous sequence - C.trachomatis:162 C.variabilis:162

O84812              	100.00%		E1ZN16              	100.00%
                    	       		E1ZF51              	13.98%
Bootstrap support for O84812 as seed ortholog is 100%.
Bootstrap support for E1ZN16 as seed ortholog is 100%.

Group of orthologs #136. Best score 161 bits
Score difference with first non-orthologous sequence - C.trachomatis:161 C.variabilis:29

O84456              	100.00%		E1Z339              	100.00%
Bootstrap support for O84456 as seed ortholog is 100%.
Bootstrap support for E1Z339 as seed ortholog is 78%.

Group of orthologs #137. Best score 161 bits
Score difference with first non-orthologous sequence - C.trachomatis:161 C.variabilis:49

O84614              	100.00%		E1ZAU6              	100.00%
Bootstrap support for O84614 as seed ortholog is 100%.
Bootstrap support for E1ZAU6 as seed ortholog is 92%.

Group of orthologs #138. Best score 160 bits
Score difference with first non-orthologous sequence - C.trachomatis:160 C.variabilis:160

P0CD88              	100.00%		F2YGN8              	100.00%
Bootstrap support for P0CD88 as seed ortholog is 100%.
Bootstrap support for F2YGN8 as seed ortholog is 100%.

Group of orthologs #139. Best score 158 bits
Score difference with first non-orthologous sequence - C.trachomatis:158 C.variabilis:158

P0CE01              	100.00%		E1ZAW7              	100.00%
Bootstrap support for P0CE01 as seed ortholog is 100%.
Bootstrap support for E1ZAW7 as seed ortholog is 100%.

Group of orthologs #140. Best score 158 bits
Score difference with first non-orthologous sequence - C.trachomatis:158 C.variabilis:158

O84463              	100.00%		E1ZFP0              	100.00%
Bootstrap support for O84463 as seed ortholog is 100%.
Bootstrap support for E1ZFP0 as seed ortholog is 100%.

Group of orthologs #141. Best score 158 bits
Score difference with first non-orthologous sequence - C.trachomatis:158 C.variabilis:76

O84596              	100.00%		E1ZH40              	100.00%
Bootstrap support for O84596 as seed ortholog is 100%.
Bootstrap support for E1ZH40 as seed ortholog is 95%.

Group of orthologs #142. Best score 157 bits
Score difference with first non-orthologous sequence - C.trachomatis:157 C.variabilis:157

O84241              	100.00%		E1Z713              	100.00%
                    	       		E1ZCL0              	19.32%
Bootstrap support for O84241 as seed ortholog is 100%.
Bootstrap support for E1Z713 as seed ortholog is 100%.

Group of orthologs #143. Best score 156 bits
Score difference with first non-orthologous sequence - C.trachomatis:156 C.variabilis:156

O84771              	100.00%		E1ZS74              	100.00%
Bootstrap support for O84771 as seed ortholog is 100%.
Bootstrap support for E1ZS74 as seed ortholog is 100%.

Group of orthologs #144. Best score 155 bits
Score difference with first non-orthologous sequence - C.trachomatis:155 C.variabilis:5

O84676              	100.00%		F2YGR0              	100.00%
O84722              	13.47%		E1ZS63              	43.38%
Bootstrap support for O84676 as seed ortholog is 100%.
Bootstrap support for F2YGR0 as seed ortholog is 46%.
Alternative seed ortholog is F2YGQ9 (5 bits away from this cluster)

Group of orthologs #145. Best score 154 bits
Score difference with first non-orthologous sequence - C.trachomatis:154 C.variabilis:154

O84703              	100.00%		E1ZLE5              	100.00%
Bootstrap support for O84703 as seed ortholog is 100%.
Bootstrap support for E1ZLE5 as seed ortholog is 100%.

Group of orthologs #146. Best score 154 bits
Score difference with first non-orthologous sequence - C.trachomatis:154 C.variabilis:45

P0CD81              	100.00%		F2YGN7              	100.00%
Bootstrap support for P0CD81 as seed ortholog is 100%.
Bootstrap support for F2YGN7 as seed ortholog is 99%.

Group of orthologs #147. Best score 153 bits
Score difference with first non-orthologous sequence - C.trachomatis:153 C.variabilis:153

O84535              	100.00%		E1ZH85              	100.00%
Bootstrap support for O84535 as seed ortholog is 100%.
Bootstrap support for E1ZH85 as seed ortholog is 100%.

Group of orthologs #148. Best score 152 bits
Score difference with first non-orthologous sequence - C.trachomatis:152 C.variabilis:54

O84874              	100.00%		E1Z2X5              	100.00%
                    	       		E1Z6J6              	30.52%
Bootstrap support for O84874 as seed ortholog is 100%.
Bootstrap support for E1Z2X5 as seed ortholog is 87%.

Group of orthologs #149. Best score 152 bits
Score difference with first non-orthologous sequence - C.trachomatis:152 C.variabilis:152

O84123              	100.00%		E1Z7S4              	100.00%
                    	       		E1Z302              	8.17%
Bootstrap support for O84123 as seed ortholog is 100%.
Bootstrap support for E1Z7S4 as seed ortholog is 100%.

Group of orthologs #150. Best score 152 bits
Score difference with first non-orthologous sequence - C.trachomatis:152 C.variabilis:54

O84089              	100.00%		E1ZMZ5              	100.00%
Bootstrap support for O84089 as seed ortholog is 100%.
Bootstrap support for E1ZMZ5 as seed ortholog is 86%.

Group of orthologs #151. Best score 151 bits
Score difference with first non-orthologous sequence - C.trachomatis:151 C.variabilis:151

O84374              	100.00%		E1ZRT0              	100.00%
Bootstrap support for O84374 as seed ortholog is 100%.
Bootstrap support for E1ZRT0 as seed ortholog is 100%.

Group of orthologs #152. Best score 151 bits
Score difference with first non-orthologous sequence - C.trachomatis:151 C.variabilis:151

P0CD83              	100.00%		F2YGN6              	100.00%
Bootstrap support for P0CD83 as seed ortholog is 100%.
Bootstrap support for F2YGN6 as seed ortholog is 100%.

Group of orthologs #153. Best score 149 bits
Score difference with first non-orthologous sequence - C.trachomatis:149 C.variabilis:149

O84685              	100.00%		E1Z7G2              	100.00%
Bootstrap support for O84685 as seed ortholog is 100%.
Bootstrap support for E1Z7G2 as seed ortholog is 100%.

Group of orthologs #154. Best score 148 bits
Score difference with first non-orthologous sequence - C.trachomatis:148 C.variabilis:148

O84835              	100.00%		E1Z5N5              	100.00%
                    	       		E1ZN13              	34.27%
Bootstrap support for O84835 as seed ortholog is 100%.
Bootstrap support for E1Z5N5 as seed ortholog is 100%.

Group of orthologs #155. Best score 147 bits
Score difference with first non-orthologous sequence - C.trachomatis:147 C.variabilis:56

O84720              	100.00%		E1ZJ29              	100.00%
Bootstrap support for O84720 as seed ortholog is 100%.
Bootstrap support for E1ZJ29 as seed ortholog is 91%.

Group of orthologs #156. Best score 146 bits
Score difference with first non-orthologous sequence - C.trachomatis:146 C.variabilis:146

O84096              	100.00%		E1ZH81              	100.00%
Bootstrap support for O84096 as seed ortholog is 100%.
Bootstrap support for E1ZH81 as seed ortholog is 100%.

Group of orthologs #157. Best score 146 bits
Score difference with first non-orthologous sequence - C.trachomatis:146 C.variabilis:65

O84309              	100.00%		E1ZH03              	100.00%
Bootstrap support for O84309 as seed ortholog is 100%.
Bootstrap support for E1ZH03 as seed ortholog is 92%.

Group of orthologs #158. Best score 145 bits
Score difference with first non-orthologous sequence - C.trachomatis:145 C.variabilis:54

P0CE06              	100.00%		F2YGM7              	100.00%
Bootstrap support for P0CE06 as seed ortholog is 100%.
Bootstrap support for F2YGM7 as seed ortholog is 99%.

Group of orthologs #159. Best score 144 bits
Score difference with first non-orthologous sequence - C.trachomatis:144 C.variabilis:77

P0CE03              	100.00%		F2YGP2              	100.00%
Bootstrap support for P0CE03 as seed ortholog is 100%.
Bootstrap support for F2YGP2 as seed ortholog is 99%.

Group of orthologs #160. Best score 143 bits
Score difference with first non-orthologous sequence - C.trachomatis:143 C.variabilis:143

P0CD79              	100.00%		E1Z247              	100.00%
Bootstrap support for P0CD79 as seed ortholog is 100%.
Bootstrap support for E1Z247 as seed ortholog is 100%.

Group of orthologs #161. Best score 142 bits
Score difference with first non-orthologous sequence - C.trachomatis:142 C.variabilis:67

P55137              	100.00%		E1ZDG0              	100.00%
Bootstrap support for P55137 as seed ortholog is 100%.
Bootstrap support for E1ZDG0 as seed ortholog is 97%.

Group of orthologs #162. Best score 141 bits
Score difference with first non-orthologous sequence - C.trachomatis:141 C.variabilis:84

O84527              	100.00%		F2YGN5              	100.00%
Bootstrap support for O84527 as seed ortholog is 100%.
Bootstrap support for F2YGN5 as seed ortholog is 99%.

Group of orthologs #163. Best score 136 bits
Score difference with first non-orthologous sequence - C.trachomatis:136 C.variabilis:136

O84271              	100.00%		E1Z4U6              	100.00%
Bootstrap support for O84271 as seed ortholog is 100%.
Bootstrap support for E1Z4U6 as seed ortholog is 100%.

Group of orthologs #164. Best score 134 bits
Score difference with first non-orthologous sequence - C.trachomatis:134 C.variabilis:134

O84260              	100.00%		E1ZDB8              	100.00%
                    	       		E1ZRR8              	13.02%
Bootstrap support for O84260 as seed ortholog is 100%.
Bootstrap support for E1ZDB8 as seed ortholog is 100%.

Group of orthologs #165. Best score 134 bits
Score difference with first non-orthologous sequence - C.trachomatis:134 C.variabilis:4

O84533              	100.00%		E1ZGM1              	100.00%
Bootstrap support for O84533 as seed ortholog is 100%.
Bootstrap support for E1ZGM1 as seed ortholog is 55%.
Alternative seed ortholog is E1ZRQ1 (4 bits away from this cluster)

Group of orthologs #166. Best score 129 bits
Score difference with first non-orthologous sequence - C.trachomatis:129 C.variabilis:129

O84492              	100.00%		E1ZHU3              	100.00%
Bootstrap support for O84492 as seed ortholog is 100%.
Bootstrap support for E1ZHU3 as seed ortholog is 100%.

Group of orthologs #167. Best score 128 bits
Score difference with first non-orthologous sequence - C.trachomatis:128 C.variabilis:40

O84650              	100.00%		E1Z5J0              	100.00%
                    	       		E1ZL77              	7.39%
Bootstrap support for O84650 as seed ortholog is 100%.
Bootstrap support for E1Z5J0 as seed ortholog is 89%.

Group of orthologs #168. Best score 126 bits
Score difference with first non-orthologous sequence - C.trachomatis:126 C.variabilis:126

O84410              	100.00%		E1ZSB9              	100.00%
Bootstrap support for O84410 as seed ortholog is 100%.
Bootstrap support for E1ZSB9 as seed ortholog is 100%.

Group of orthologs #169. Best score 126 bits
Score difference with first non-orthologous sequence - C.trachomatis:126 C.variabilis:126

O84728              	100.00%		E1ZUB5              	100.00%
Bootstrap support for O84728 as seed ortholog is 100%.
Bootstrap support for E1ZUB5 as seed ortholog is 100%.

Group of orthologs #170. Best score 125 bits
Score difference with first non-orthologous sequence - C.trachomatis:125 C.variabilis:125

O84752              	100.00%		E1ZGX4              	100.00%
                    	       		E1ZM97              	100.00%
                    	       		E1Z6V8              	19.13%
Bootstrap support for O84752 as seed ortholog is 100%.
Bootstrap support for E1ZGX4 as seed ortholog is 100%.
Bootstrap support for E1ZM97 as seed ortholog is 100%.

Group of orthologs #171. Best score 125 bits
Score difference with first non-orthologous sequence - C.trachomatis:125 C.variabilis:125

O84547              	100.00%		E1ZQL4              	100.00%
Bootstrap support for O84547 as seed ortholog is 100%.
Bootstrap support for E1ZQL4 as seed ortholog is 100%.

Group of orthologs #172. Best score 125 bits
Score difference with first non-orthologous sequence - C.trachomatis:125 C.variabilis:31

O84358              	100.00%		E1ZS20              	100.00%
Bootstrap support for O84358 as seed ortholog is 100%.
Bootstrap support for E1ZS20 as seed ortholog is 77%.

Group of orthologs #173. Best score 124 bits
Score difference with first non-orthologous sequence - C.trachomatis:124 C.variabilis:124

O84367              	100.00%		E1ZGG6              	100.00%
Bootstrap support for O84367 as seed ortholog is 100%.
Bootstrap support for E1ZGG6 as seed ortholog is 100%.

Group of orthologs #174. Best score 123 bits
Score difference with first non-orthologous sequence - C.trachomatis:123 C.variabilis:61

P0A4C8              	100.00%		E1ZD39              	100.00%
Bootstrap support for P0A4C8 as seed ortholog is 100%.
Bootstrap support for E1ZD39 as seed ortholog is 99%.

Group of orthologs #175. Best score 122 bits
Score difference with first non-orthologous sequence - C.trachomatis:2 C.variabilis:50

O84132              	100.00%		F2YGI5              	100.00%
                    	       		E1Z9P8              	30.23%
Bootstrap support for O84132 as seed ortholog is 52%.
Alternative seed ortholog is O84205 (2 bits away from this cluster)
Bootstrap support for F2YGI5 as seed ortholog is 95%.

Group of orthologs #176. Best score 118 bits
Score difference with first non-orthologous sequence - C.trachomatis:118 C.variabilis:118

O84537              	100.00%		E1Z8J0              	100.00%
Bootstrap support for O84537 as seed ortholog is 100%.
Bootstrap support for E1Z8J0 as seed ortholog is 100%.

Group of orthologs #177. Best score 118 bits
Score difference with first non-orthologous sequence - C.trachomatis:118 C.variabilis:118

O84631              	100.00%		F2YGR2              	100.00%
Bootstrap support for O84631 as seed ortholog is 100%.
Bootstrap support for F2YGR2 as seed ortholog is 100%.

Group of orthologs #178. Best score 116 bits
Score difference with first non-orthologous sequence - C.trachomatis:116 C.variabilis:116

O84684              	100.00%		E1Z2B4              	100.00%
Bootstrap support for O84684 as seed ortholog is 100%.
Bootstrap support for E1Z2B4 as seed ortholog is 100%.

Group of orthologs #179. Best score 116 bits
Score difference with first non-orthologous sequence - C.trachomatis:116 C.variabilis:62

P0CE02              	100.00%		E1ZGL4              	100.00%
Bootstrap support for P0CE02 as seed ortholog is 100%.
Bootstrap support for E1ZGL4 as seed ortholog is 99%.

Group of orthologs #180. Best score 115 bits
Score difference with first non-orthologous sequence - C.trachomatis:115 C.variabilis:115

O84864              	100.00%		E1ZFV5              	100.00%
                    	       		E1Z6Z0              	48.13%
                    	       		E1Z6Z2              	42.43%
                    	       		E1ZEJ0              	39.33%
Bootstrap support for O84864 as seed ortholog is 100%.
Bootstrap support for E1ZFV5 as seed ortholog is 100%.

Group of orthologs #181. Best score 114 bits
Score difference with first non-orthologous sequence - C.trachomatis:114 C.variabilis:3

O84130              	100.00%		E1ZQS3              	100.00%
Bootstrap support for O84130 as seed ortholog is 100%.
Bootstrap support for E1ZQS3 as seed ortholog is 53%.
Alternative seed ortholog is E1ZJ63 (3 bits away from this cluster)

Group of orthologs #182. Best score 113 bits
Score difference with first non-orthologous sequence - C.trachomatis:113 C.variabilis:113

O84806              	100.00%		E1Z220              	100.00%
Bootstrap support for O84806 as seed ortholog is 100%.
Bootstrap support for E1Z220 as seed ortholog is 100%.

Group of orthologs #183. Best score 113 bits
Score difference with first non-orthologous sequence - C.trachomatis:113 C.variabilis:113

O84843              	100.00%		E1Z8H9              	100.00%
Bootstrap support for O84843 as seed ortholog is 100%.
Bootstrap support for E1Z8H9 as seed ortholog is 100%.

Group of orthologs #184. Best score 112 bits
Score difference with first non-orthologous sequence - C.trachomatis:112 C.variabilis:112

O84508              	100.00%		E1Z406              	100.00%
                    	       		E1Z6R7              	22.46%
                    	       		E1Z926              	20.76%
Bootstrap support for O84508 as seed ortholog is 100%.
Bootstrap support for E1Z406 as seed ortholog is 100%.

Group of orthologs #185. Best score 111 bits
Score difference with first non-orthologous sequence - C.trachomatis:111 C.variabilis:18

O84469              	100.00%		E1Z4K5              	100.00%
Bootstrap support for O84469 as seed ortholog is 100%.
Bootstrap support for E1Z4K5 as seed ortholog is 75%.

Group of orthologs #186. Best score 111 bits
Score difference with first non-orthologous sequence - C.trachomatis:111 C.variabilis:111

O84215              	100.00%		E1Z7C4              	100.00%
Bootstrap support for O84215 as seed ortholog is 100%.
Bootstrap support for E1Z7C4 as seed ortholog is 100%.

Group of orthologs #187. Best score 110 bits
Score difference with first non-orthologous sequence - C.trachomatis:110 C.variabilis:110

O84810              	100.00%		E1Z1Z9              	100.00%
Bootstrap support for O84810 as seed ortholog is 100%.
Bootstrap support for E1Z1Z9 as seed ortholog is 100%.

Group of orthologs #188. Best score 108 bits
Score difference with first non-orthologous sequence - C.trachomatis:108 C.variabilis:108

P66480              	100.00%		F2YGN4              	100.00%
Bootstrap support for P66480 as seed ortholog is 100%.
Bootstrap support for F2YGN4 as seed ortholog is 100%.

Group of orthologs #189. Best score 107 bits
Score difference with first non-orthologous sequence - C.trachomatis:107 C.variabilis:16

O84851              	100.00%		E1Z9L0              	100.00%
Bootstrap support for O84851 as seed ortholog is 100%.
Bootstrap support for E1Z9L0 as seed ortholog is 77%.

Group of orthologs #190. Best score 106 bits
Score difference with first non-orthologous sequence - C.trachomatis:106 C.variabilis:106

O84578              	100.00%		E1ZLP7              	100.00%
                    	       		E1ZDS5              	6.22%
Bootstrap support for O84578 as seed ortholog is 100%.
Bootstrap support for E1ZLP7 as seed ortholog is 100%.

Group of orthologs #191. Best score 106 bits
Score difference with first non-orthologous sequence - C.trachomatis:106 C.variabilis:106

O84173              	100.00%		E1Z7Q8              	100.00%
Bootstrap support for O84173 as seed ortholog is 100%.
Bootstrap support for E1Z7Q8 as seed ortholog is 100%.

Group of orthologs #192. Best score 106 bits
Score difference with first non-orthologous sequence - C.trachomatis:106 C.variabilis:106

O84331              	100.00%		E1ZG83              	100.00%
Bootstrap support for O84331 as seed ortholog is 100%.
Bootstrap support for E1ZG83 as seed ortholog is 100%.

Group of orthologs #193. Best score 106 bits
Score difference with first non-orthologous sequence - C.trachomatis:106 C.variabilis:106

O84033              	100.00%		E1ZMY4              	100.00%
Bootstrap support for O84033 as seed ortholog is 100%.
Bootstrap support for E1ZMY4 as seed ortholog is 100%.

Group of orthologs #194. Best score 105 bits
Score difference with first non-orthologous sequence - C.trachomatis:105 C.variabilis:56

O84779              	100.00%		E1ZIB9              	100.00%
Bootstrap support for O84779 as seed ortholog is 100%.
Bootstrap support for E1ZIB9 as seed ortholog is 92%.

Group of orthologs #195. Best score 104 bits
Score difference with first non-orthologous sequence - C.trachomatis:104 C.variabilis:104

O84357              	100.00%		E1Z8X3              	100.00%
Bootstrap support for O84357 as seed ortholog is 100%.
Bootstrap support for E1Z8X3 as seed ortholog is 100%.

Group of orthologs #196. Best score 104 bits
Score difference with first non-orthologous sequence - C.trachomatis:104 C.variabilis:48

O84777              	100.00%		E1ZQX8              	100.00%
Bootstrap support for O84777 as seed ortholog is 100%.
Bootstrap support for E1ZQX8 as seed ortholog is 94%.

Group of orthologs #197. Best score 104 bits
Score difference with first non-orthologous sequence - C.trachomatis:104 C.variabilis:104

O84031              	100.00%		F2YGM9              	100.00%
Bootstrap support for O84031 as seed ortholog is 100%.
Bootstrap support for F2YGM9 as seed ortholog is 100%.

Group of orthologs #198. Best score 104 bits
Score difference with first non-orthologous sequence - C.trachomatis:104 C.variabilis:22

O84318              	100.00%		F2YGP5              	100.00%
Bootstrap support for O84318 as seed ortholog is 100%.
Bootstrap support for F2YGP5 as seed ortholog is 96%.

Group of orthologs #199. Best score 102 bits
Score difference with first non-orthologous sequence - C.trachomatis:102 C.variabilis:102

O84127              	100.00%		E1Z709              	100.00%
                    	       		E1ZDQ5              	100.00%
Bootstrap support for O84127 as seed ortholog is 100%.
Bootstrap support for E1Z709 as seed ortholog is 100%.
Bootstrap support for E1ZDQ5 as seed ortholog is 100%.

Group of orthologs #200. Best score 102 bits
Score difference with first non-orthologous sequence - C.trachomatis:102 C.variabilis:102

P0CE07              	100.00%		F2YGN9              	100.00%
Bootstrap support for P0CE07 as seed ortholog is 100%.
Bootstrap support for F2YGN9 as seed ortholog is 100%.

Group of orthologs #201. Best score 100 bits
Score difference with first non-orthologous sequence - C.trachomatis:100 C.variabilis:100

O84435              	100.00%		E1ZH09              	100.00%
                    	       		E1ZI57              	5.41%
Bootstrap support for O84435 as seed ortholog is 100%.
Bootstrap support for E1ZH09 as seed ortholog is 100%.

Group of orthologs #202. Best score 100 bits
Score difference with first non-orthologous sequence - C.trachomatis:100 C.variabilis:100

O84075              	100.00%		E1ZSH8              	100.00%
Bootstrap support for O84075 as seed ortholog is 100%.
Bootstrap support for E1ZSH8 as seed ortholog is 100%.

Group of orthologs #203. Best score 99 bits
Score difference with first non-orthologous sequence - C.trachomatis:99 C.variabilis:40

O84781              	100.00%		E1ZML0              	100.00%
                    	       		E1ZF94              	9.11%
                    	       		E1Z493              	7.94%
                    	       		E1ZA30              	7.31%
                    	       		E1ZNN2              	6.99%
                    	       		E1ZEJ5              	6.04%
Bootstrap support for O84781 as seed ortholog is 100%.
Bootstrap support for E1ZML0 as seed ortholog is 84%.

Group of orthologs #204. Best score 99 bits
Score difference with first non-orthologous sequence - C.trachomatis:99 C.variabilis:99

O84448              	100.00%		E1ZA17              	100.00%
                    	       		E1ZDZ6              	19.73%
                    	       		E1ZDY3              	15.13%
Bootstrap support for O84448 as seed ortholog is 100%.
Bootstrap support for E1ZA17 as seed ortholog is 100%.

Group of orthologs #205. Best score 97 bits
Score difference with first non-orthologous sequence - C.trachomatis:97 C.variabilis:97

O84825              	100.00%		E1ZL17              	100.00%
O84824              	57.75%		
Bootstrap support for O84825 as seed ortholog is 100%.
Bootstrap support for E1ZL17 as seed ortholog is 100%.

Group of orthologs #206. Best score 97 bits
Score difference with first non-orthologous sequence - C.trachomatis:97 C.variabilis:5

O84842              	100.00%		F2YGM3              	100.00%
Bootstrap support for O84842 as seed ortholog is 100%.
Bootstrap support for F2YGM3 as seed ortholog is 62%.
Alternative seed ortholog is E1ZLL1 (5 bits away from this cluster)

Group of orthologs #207. Best score 96 bits
Score difference with first non-orthologous sequence - C.trachomatis:96 C.variabilis:45

O84395              	100.00%		E1Z4X7              	100.00%
Bootstrap support for O84395 as seed ortholog is 100%.
Bootstrap support for E1Z4X7 as seed ortholog is 85%.

Group of orthologs #208. Best score 96 bits
Score difference with first non-orthologous sequence - C.trachomatis:96 C.variabilis:96

P0CD85              	100.00%		E1Z8F9              	100.00%
Bootstrap support for P0CD85 as seed ortholog is 100%.
Bootstrap support for E1Z8F9 as seed ortholog is 100%.

Group of orthologs #209. Best score 95 bits
Score difference with first non-orthologous sequence - C.trachomatis:95 C.variabilis:38

P0CE04              	100.00%		E1ZQ11              	100.00%
Bootstrap support for P0CE04 as seed ortholog is 100%.
Bootstrap support for E1ZQ11 as seed ortholog is 94%.

Group of orthologs #210. Best score 94 bits
Score difference with first non-orthologous sequence - C.trachomatis:94 C.variabilis:18

P66123              	100.00%		E1ZHJ6              	100.00%
Bootstrap support for P66123 as seed ortholog is 100%.
Bootstrap support for E1ZHJ6 as seed ortholog is 87%.

Group of orthologs #211. Best score 94 bits
Score difference with first non-orthologous sequence - C.trachomatis:94 C.variabilis:17

O84532              	100.00%		E1ZMF4              	100.00%
Bootstrap support for O84532 as seed ortholog is 100%.
Bootstrap support for E1ZMF4 as seed ortholog is 72%.
Alternative seed ortholog is E1Z806 (17 bits away from this cluster)

Group of orthologs #212. Best score 94 bits
Score difference with first non-orthologous sequence - C.trachomatis:94 C.variabilis:94

O84301              	100.00%		E1ZRQ7              	100.00%
Bootstrap support for O84301 as seed ortholog is 100%.
Bootstrap support for E1ZRQ7 as seed ortholog is 100%.

Group of orthologs #213. Best score 91 bits
Score difference with first non-orthologous sequence - C.trachomatis:91 C.variabilis:91

O84294              	100.00%		E1ZRW6              	100.00%
Bootstrap support for O84294 as seed ortholog is 100%.
Bootstrap support for E1ZRW6 as seed ortholog is 100%.

Group of orthologs #214. Best score 91 bits
Score difference with first non-orthologous sequence - C.trachomatis:91 C.variabilis:7

O84128              	100.00%		F2YGP4              	100.00%
Bootstrap support for O84128 as seed ortholog is 100%.
Bootstrap support for F2YGP4 as seed ortholog is 67%.
Alternative seed ortholog is E1ZJD9 (7 bits away from this cluster)

Group of orthologs #215. Best score 90 bits
Score difference with first non-orthologous sequence - C.trachomatis:90 C.variabilis:90

O84867              	100.00%		E1ZCI4              	100.00%
Bootstrap support for O84867 as seed ortholog is 100%.
Bootstrap support for E1ZCI4 as seed ortholog is 100%.

Group of orthologs #216. Best score 89 bits
Score difference with first non-orthologous sequence - C.trachomatis:89 C.variabilis:15

P0CD84              	100.00%		E1Z9T9              	100.00%
Bootstrap support for P0CD84 as seed ortholog is 100%.
Bootstrap support for E1Z9T9 as seed ortholog is 73%.
Alternative seed ortholog is E1ZJX9 (15 bits away from this cluster)

Group of orthologs #217. Best score 88 bits
Score difference with first non-orthologous sequence - C.trachomatis:88 C.variabilis:88

O84540              	100.00%		E1ZE14              	100.00%
Bootstrap support for O84540 as seed ortholog is 100%.
Bootstrap support for E1ZE14 as seed ortholog is 100%.

Group of orthologs #218. Best score 87 bits
Score difference with first non-orthologous sequence - C.trachomatis:87 C.variabilis:87

P36431              	100.00%		E1ZGR2              	100.00%
                    	       		E1ZT46              	20.85%
Bootstrap support for P36431 as seed ortholog is 100%.
Bootstrap support for E1ZGR2 as seed ortholog is 100%.

Group of orthologs #219. Best score 84 bits
Score difference with first non-orthologous sequence - C.trachomatis:84 C.variabilis:84

O84595              	100.00%		E1ZE49              	100.00%
Bootstrap support for O84595 as seed ortholog is 100%.
Bootstrap support for E1ZE49 as seed ortholog is 100%.

Group of orthologs #220. Best score 83 bits
Score difference with first non-orthologous sequence - C.trachomatis:83 C.variabilis:83

O84353              	100.00%		E1ZDV7              	100.00%
Bootstrap support for O84353 as seed ortholog is 100%.
Bootstrap support for E1ZDV7 as seed ortholog is 100%.

Group of orthologs #221. Best score 83 bits
Score difference with first non-orthologous sequence - C.trachomatis:83 C.variabilis:83

O84284              	100.00%		E1ZLH9              	100.00%
Bootstrap support for O84284 as seed ortholog is 100%.
Bootstrap support for E1ZLH9 as seed ortholog is 100%.

Group of orthologs #222. Best score 82 bits
Score difference with first non-orthologous sequence - C.trachomatis:82 C.variabilis:25

P36424              	100.00%		E1ZJ28              	100.00%
Bootstrap support for P36424 as seed ortholog is 100%.
Bootstrap support for E1ZJ28 as seed ortholog is 83%.

Group of orthologs #223. Best score 82 bits
Score difference with first non-orthologous sequence - C.trachomatis:82 C.variabilis:82

O84792              	100.00%		F2YGL0              	100.00%
Bootstrap support for O84792 as seed ortholog is 100%.
Bootstrap support for F2YGL0 as seed ortholog is 100%.

Group of orthologs #224. Best score 81 bits
Score difference with first non-orthologous sequence - C.trachomatis:81 C.variabilis:81

O84782              	100.00%		E1ZEE0              	100.00%
                    	       		E1ZD66              	7.65%
Bootstrap support for O84782 as seed ortholog is 100%.
Bootstrap support for E1ZEE0 as seed ortholog is 100%.

Group of orthologs #225. Best score 80 bits
Score difference with first non-orthologous sequence - C.trachomatis:80 C.variabilis:80

O84390              	100.00%		E1Z2V2              	100.00%
Bootstrap support for O84390 as seed ortholog is 100%.
Bootstrap support for E1Z2V2 as seed ortholog is 100%.

Group of orthologs #226. Best score 80 bits
Score difference with first non-orthologous sequence - C.trachomatis:80 C.variabilis:80

O84375              	100.00%		E1Z9D5              	100.00%
Bootstrap support for O84375 as seed ortholog is 100%.
Bootstrap support for E1Z9D5 as seed ortholog is 100%.

Group of orthologs #227. Best score 80 bits
Score difference with first non-orthologous sequence - C.trachomatis:80 C.variabilis:14

O84544              	100.00%		E1ZS12              	100.00%
Bootstrap support for O84544 as seed ortholog is 100%.
Bootstrap support for E1ZS12 as seed ortholog is 78%.

Group of orthologs #228. Best score 79 bits
Score difference with first non-orthologous sequence - C.trachomatis:79 C.variabilis:79

O84366              	100.00%		E1ZQT1              	100.00%
Bootstrap support for O84366 as seed ortholog is 100%.
Bootstrap support for E1ZQT1 as seed ortholog is 100%.

Group of orthologs #229. Best score 78 bits
Score difference with first non-orthologous sequence - C.trachomatis:78 C.variabilis:78

O84778              	100.00%		E1ZFZ5              	100.00%
                    	       		E1Z7M2              	68.47%
                    	       		E1ZIY0              	11.67%
                    	       		E1ZFJ4              	11.19%
Bootstrap support for O84778 as seed ortholog is 100%.
Bootstrap support for E1ZFZ5 as seed ortholog is 100%.

Group of orthologs #230. Best score 77 bits
Score difference with first non-orthologous sequence - C.trachomatis:77 C.variabilis:77

O84680              	100.00%		E1ZTI4              	100.00%
                    	       		E1ZPY0              	17.38%
                    	       		E1ZL55              	7.26%
                    	       		E1ZE46              	6.27%
                    	       		E1ZJY6              	5.98%
                    	       		E1ZHF7              	5.56%
                    	       		E1ZPN8              	5.13%
Bootstrap support for O84680 as seed ortholog is 100%.
Bootstrap support for E1ZTI4 as seed ortholog is 100%.

Group of orthologs #231. Best score 77 bits
Score difference with first non-orthologous sequence - C.trachomatis:77 C.variabilis:77

O84442              	100.00%		E1Z248              	100.00%
                    	       		E1ZIH5              	19.32%
                    	       		E1Z6U1              	16.37%
                    	       		E1ZA31              	11.18%
Bootstrap support for O84442 as seed ortholog is 100%.
Bootstrap support for E1Z248 as seed ortholog is 100%.

Group of orthologs #232. Best score 77 bits
Score difference with first non-orthologous sequence - C.trachomatis:77 C.variabilis:77

P0CD82              	100.00%		E1ZBJ3              	100.00%
Bootstrap support for P0CD82 as seed ortholog is 100%.
Bootstrap support for E1ZBJ3 as seed ortholog is 100%.

Group of orthologs #233. Best score 76 bits
Score difference with first non-orthologous sequence - C.trachomatis:76 C.variabilis:76

O84213              	100.00%		E1ZTA4              	100.00%
Bootstrap support for O84213 as seed ortholog is 100%.
Bootstrap support for E1ZTA4 as seed ortholog is 100%.

Group of orthologs #234. Best score 75 bits
Score difference with first non-orthologous sequence - C.trachomatis:75 C.variabilis:14

O84665              	100.00%		E1Z9U6              	100.00%
O84108              	6.54%		
Bootstrap support for O84665 as seed ortholog is 100%.
Bootstrap support for E1Z9U6 as seed ortholog is 24%.
Alternative seed ortholog is E1ZDP0 (14 bits away from this cluster)

Group of orthologs #235. Best score 75 bits
Score difference with first non-orthologous sequence - C.trachomatis:75 C.variabilis:75

O84391              	100.00%		E1ZL06              	100.00%
Bootstrap support for O84391 as seed ortholog is 100%.
Bootstrap support for E1ZL06 as seed ortholog is 100%.

Group of orthologs #236. Best score 74 bits
Score difference with first non-orthologous sequence - C.trachomatis:74 C.variabilis:74

O84338              	100.00%		E1Z6M8              	100.00%
                    	       		E1ZCQ9              	21.50%
                    	       		E1Z5E8              	16.67%
Bootstrap support for O84338 as seed ortholog is 100%.
Bootstrap support for E1Z6M8 as seed ortholog is 100%.

Group of orthologs #237. Best score 74 bits
Score difference with first non-orthologous sequence - C.trachomatis:74 C.variabilis:74

O84299              	100.00%		E1Z6E3              	100.00%
Bootstrap support for O84299 as seed ortholog is 100%.
Bootstrap support for E1Z6E3 as seed ortholog is 100%.

Group of orthologs #238. Best score 74 bits
Score difference with first non-orthologous sequence - C.trachomatis:74 C.variabilis:74

O84822              	100.00%		E1ZNP4              	100.00%
Bootstrap support for O84822 as seed ortholog is 100%.
Bootstrap support for E1ZNP4 as seed ortholog is 100%.

Group of orthologs #239. Best score 72 bits
Score difference with first non-orthologous sequence - C.trachomatis:72 C.variabilis:16

O84599              	100.00%		E1ZR20              	100.00%
Bootstrap support for O84599 as seed ortholog is 100%.
Bootstrap support for E1ZR20 as seed ortholog is 68%.
Alternative seed ortholog is E1Z7M7 (16 bits away from this cluster)

Group of orthologs #240. Best score 72 bits
Score difference with first non-orthologous sequence - C.trachomatis:72 C.variabilis:72

P0CE08              	100.00%		F2YGP3              	100.00%
Bootstrap support for P0CE08 as seed ortholog is 100%.
Bootstrap support for F2YGP3 as seed ortholog is 100%.

Group of orthologs #241. Best score 70 bits
Score difference with first non-orthologous sequence - C.trachomatis:70 C.variabilis:70

O84189              	100.00%		E1Z675              	100.00%
                    	       		E1ZLS7              	16.78%
Bootstrap support for O84189 as seed ortholog is 100%.
Bootstrap support for E1Z675 as seed ortholog is 100%.

Group of orthologs #242. Best score 69 bits
Score difference with first non-orthologous sequence - C.trachomatis:69 C.variabilis:69

O84499              	100.00%		E1Z528              	100.00%
Bootstrap support for O84499 as seed ortholog is 100%.
Bootstrap support for E1Z528 as seed ortholog is 100%.

Group of orthologs #243. Best score 68 bits
Score difference with first non-orthologous sequence - C.trachomatis:68 C.variabilis:68

O84441              	100.00%		E1ZJY8              	100.00%
Bootstrap support for O84441 as seed ortholog is 100%.
Bootstrap support for E1ZJY8 as seed ortholog is 100%.

Group of orthologs #244. Best score 67 bits
Score difference with first non-orthologous sequence - C.trachomatis:67 C.variabilis:67

O84437              	100.00%		E1ZNM7              	100.00%
Bootstrap support for O84437 as seed ortholog is 100%.
Bootstrap support for E1ZNM7 as seed ortholog is 100%.

Group of orthologs #245. Best score 66 bits
Score difference with first non-orthologous sequence - C.trachomatis:66 C.variabilis:17

P0C0Z8              	100.00%		E1ZAZ4              	100.00%
Bootstrap support for P0C0Z8 as seed ortholog is 100%.
Bootstrap support for E1ZAZ4 as seed ortholog is 84%.

Group of orthologs #246. Best score 64 bits
Score difference with first non-orthologous sequence - C.trachomatis:64 C.variabilis:64

O84139              	100.00%		E1ZGB7              	100.00%
Bootstrap support for O84139 as seed ortholog is 100%.
Bootstrap support for E1ZGB7 as seed ortholog is 100%.

Group of orthologs #247. Best score 64 bits
Score difference with first non-orthologous sequence - C.trachomatis:64 C.variabilis:64

O84611              	100.00%		E1ZQM0              	100.00%
Bootstrap support for O84611 as seed ortholog is 100%.
Bootstrap support for E1ZQM0 as seed ortholog is 100%.

Group of orthologs #248. Best score 63 bits
Score difference with first non-orthologous sequence - C.trachomatis:63 C.variabilis:63

O84029              	100.00%		E1Z1Y6              	100.00%
                    	       		E1Z8R1              	8.39%
Bootstrap support for O84029 as seed ortholog is 100%.
Bootstrap support for E1Z1Y6 as seed ortholog is 100%.

Group of orthologs #249. Best score 63 bits
Score difference with first non-orthologous sequence - C.trachomatis:63 C.variabilis:63

O84805              	100.00%		E1ZR57              	100.00%
Bootstrap support for O84805 as seed ortholog is 100%.
Bootstrap support for E1ZR57 as seed ortholog is 100%.

Group of orthologs #250. Best score 63 bits
Score difference with first non-orthologous sequence - C.trachomatis:63 C.variabilis:63

P65106              	100.00%		F2YGP0              	100.00%
Bootstrap support for P65106 as seed ortholog is 100%.
Bootstrap support for F2YGP0 as seed ortholog is 100%.

Group of orthologs #251. Best score 62 bits
Score difference with first non-orthologous sequence - C.trachomatis:62 C.variabilis:3

P0CE05              	100.00%		E1Z6X7              	100.00%
Bootstrap support for P0CE05 as seed ortholog is 100%.
Bootstrap support for E1Z6X7 as seed ortholog is 57%.
Alternative seed ortholog is E1ZQ35 (3 bits away from this cluster)

Group of orthologs #252. Best score 61 bits
Score difference with first non-orthologous sequence - C.trachomatis:8 C.variabilis:61

O84803              	100.00%		E1ZBS3              	100.00%
                    	       		E1ZSD3              	22.52%
Bootstrap support for O84803 as seed ortholog is 57%.
Alternative seed ortholog is O84503 (8 bits away from this cluster)
Bootstrap support for E1ZBS3 as seed ortholog is 100%.

Group of orthologs #253. Best score 61 bits
Score difference with first non-orthologous sequence - C.trachomatis:61 C.variabilis:61

O84064              	100.00%		E1ZSU1              	100.00%
                    	       		E1ZEW9              	18.06%
Bootstrap support for O84064 as seed ortholog is 100%.
Bootstrap support for E1ZSU1 as seed ortholog is 100%.

Group of orthologs #254. Best score 61 bits
Score difference with first non-orthologous sequence - C.trachomatis:61 C.variabilis:7

O84239              	100.00%		E1Z5W8              	100.00%
Bootstrap support for O84239 as seed ortholog is 100%.
Bootstrap support for E1Z5W8 as seed ortholog is 71%.
Alternative seed ortholog is E1Z6T8 (7 bits away from this cluster)

Group of orthologs #255. Best score 61 bits
Score difference with first non-orthologous sequence - C.trachomatis:61 C.variabilis:61

P66427              	100.00%		E1ZDQ4              	100.00%
Bootstrap support for P66427 as seed ortholog is 100%.
Bootstrap support for E1ZDQ4 as seed ortholog is 100%.

Group of orthologs #256. Best score 61 bits
Score difference with first non-orthologous sequence - C.trachomatis:61 C.variabilis:61

O84218              	100.00%		E1ZTQ5              	100.00%
Bootstrap support for O84218 as seed ortholog is 100%.
Bootstrap support for E1ZTQ5 as seed ortholog is 100%.

Group of orthologs #257. Best score 59 bits
Score difference with first non-orthologous sequence - C.trachomatis:59 C.variabilis:59

O84557              	100.00%		E1Z8C8              	100.00%
Bootstrap support for O84557 as seed ortholog is 100%.
Bootstrap support for E1Z8C8 as seed ortholog is 100%.

Group of orthologs #258. Best score 58 bits
Score difference with first non-orthologous sequence - C.trachomatis:58 C.variabilis:58

O84809              	100.00%		E1ZLZ0              	100.00%
Bootstrap support for O84809 as seed ortholog is 100%.
Bootstrap support for E1ZLZ0 as seed ortholog is 100%.

Group of orthologs #259. Best score 57 bits
Score difference with first non-orthologous sequence - C.trachomatis:57 C.variabilis:57

O84479              	100.00%		E1ZGN2              	100.00%
Bootstrap support for O84479 as seed ortholog is 100%.
Bootstrap support for E1ZGN2 as seed ortholog is 100%.

Group of orthologs #260. Best score 56 bits
Score difference with first non-orthologous sequence - C.trachomatis:56 C.variabilis:56

O84426              	100.00%		E1Z326              	100.00%
Bootstrap support for O84426 as seed ortholog is 100%.
Bootstrap support for E1Z326 as seed ortholog is 100%.

Group of orthologs #261. Best score 54 bits
Score difference with first non-orthologous sequence - C.trachomatis:54 C.variabilis:54

O84221              	100.00%		E1ZFN2              	100.00%
Bootstrap support for O84221 as seed ortholog is 100%.
Bootstrap support for E1ZFN2 as seed ortholog is 100%.

Group of orthologs #262. Best score 54 bits
Score difference with first non-orthologous sequence - C.trachomatis:54 C.variabilis:54

O84730              	100.00%		E1ZNW4              	100.00%
Bootstrap support for O84730 as seed ortholog is 100%.
Bootstrap support for E1ZNW4 as seed ortholog is 100%.

Group of orthologs #263. Best score 54 bits
Score difference with first non-orthologous sequence - C.trachomatis:54 C.variabilis:54

O84586              	100.00%		F2YGK7              	100.00%
Bootstrap support for O84586 as seed ortholog is 100%.
Bootstrap support for F2YGK7 as seed ortholog is 100%.

Group of orthologs #264. Best score 52 bits
Score difference with first non-orthologous sequence - C.trachomatis:52 C.variabilis:52

O84425              	100.00%		E1ZKZ5              	100.00%
                    	       		E1ZRR7              	100.00%
Bootstrap support for O84425 as seed ortholog is 100%.
Bootstrap support for E1ZKZ5 as seed ortholog is 100%.
Bootstrap support for E1ZRR7 as seed ortholog is 100%.

Group of orthologs #265. Best score 52 bits
Score difference with first non-orthologous sequence - C.trachomatis:52 C.variabilis:52

Q46370              	100.00%		E1ZPW8              	100.00%
Bootstrap support for Q46370 as seed ortholog is 100%.
Bootstrap support for E1ZPW8 as seed ortholog is 100%.

Group of orthologs #266. Best score 52 bits
Score difference with first non-orthologous sequence - C.trachomatis:52 C.variabilis:52

O84528              	100.00%		E1ZR96              	100.00%
Bootstrap support for O84528 as seed ortholog is 100%.
Bootstrap support for E1ZR96 as seed ortholog is 100%.

Group of orthologs #267. Best score 50 bits
Score difference with first non-orthologous sequence - C.trachomatis:50 C.variabilis:50

O84589              	100.00%		E1ZDG6              	100.00%
Bootstrap support for O84589 as seed ortholog is 100%.
Bootstrap support for E1ZDG6 as seed ortholog is 100%.

Group of orthologs #268. Best score 50 bits
Score difference with first non-orthologous sequence - C.trachomatis:50 C.variabilis:50

O84459              	100.00%		E1ZQN6              	100.00%
Bootstrap support for O84459 as seed ortholog is 100%.
Bootstrap support for E1ZQN6 as seed ortholog is 100%.

Group of orthologs #269. Best score 50 bits
Score difference with first non-orthologous sequence - C.trachomatis:50 C.variabilis:50

O84604              	100.00%		E1ZTB2              	100.00%
Bootstrap support for O84604 as seed ortholog is 100%.
Bootstrap support for E1ZTB2 as seed ortholog is 100%.

Group of orthologs #270. Best score 49 bits
Score difference with first non-orthologous sequence - C.trachomatis:49 C.variabilis:8

O84727              	100.00%		E1ZHE5              	100.00%
                    	       		E1ZUE1              	58.35%
Bootstrap support for O84727 as seed ortholog is 100%.
Bootstrap support for E1ZHE5 as seed ortholog is 60%.
Alternative seed ortholog is E1ZFQ3 (8 bits away from this cluster)

Group of orthologs #271. Best score 47 bits
Score difference with first non-orthologous sequence - C.trachomatis:47 C.variabilis:47

O84408              	100.00%		E1ZAG0              	100.00%
Bootstrap support for O84408 as seed ortholog is 100%.
Bootstrap support for E1ZAG0 as seed ortholog is 100%.

Group of orthologs #272. Best score 43 bits
Score difference with first non-orthologous sequence - C.trachomatis:43 C.variabilis:43

O84764              	100.00%		E1ZTV5              	100.00%
                    	       		E1ZTV4              	15.50%
                    	       		E1ZDU7              	12.40%
Bootstrap support for O84764 as seed ortholog is 100%.
Bootstrap support for E1ZTV5 as seed ortholog is 100%.

Group of orthologs #273. Best score 43 bits
Score difference with first non-orthologous sequence - C.trachomatis:43 C.variabilis:43

O84836              	100.00%		E1ZAU1              	100.00%
Bootstrap support for O84836 as seed ortholog is 100%.
Bootstrap support for E1ZAU1 as seed ortholog is 100%.

Group of orthologs #274. Best score 42 bits
Score difference with first non-orthologous sequence - C.trachomatis:42 C.variabilis:42

O84097              	100.00%		E1Z2H2              	100.00%
Bootstrap support for O84097 as seed ortholog is 100%.
Bootstrap support for E1Z2H2 as seed ortholog is 100%.

Group of orthologs #275. Best score 42 bits
Score difference with first non-orthologous sequence - C.trachomatis:42 C.variabilis:42

O84807              	100.00%		E1ZC20              	100.00%
Bootstrap support for O84807 as seed ortholog is 100%.
Bootstrap support for E1ZC20 as seed ortholog is 100%.

Group of orthologs #276. Best score 41 bits
Score difference with first non-orthologous sequence - C.trachomatis:41 C.variabilis:41

O84191              	100.00%		E1Z8Z0              	100.00%
Bootstrap support for O84191 as seed ortholog is 100%.
Bootstrap support for E1Z8Z0 as seed ortholog is 100%.