###################################
138 groups of orthologs
145 in-paralogs from C.trachomatis
673 in-paralogs from T.vaginalis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 817 bits
Score difference with first non-orthologous sequence - C.trachomatis:712 T.vaginalis:817

O84022              	100.00%		A2FF46              	100.00%
Bootstrap support for O84022 as seed ortholog is 100%.
Bootstrap support for A2FF46 as seed ortholog is 100%.

Group of orthologs #2. Best score 654 bits
Score difference with first non-orthologous sequence - C.trachomatis:654 T.vaginalis:654

O84250              	100.00%		A2G9E0              	100.00%
                    	       		A2DSX4              	65.13%
Bootstrap support for O84250 as seed ortholog is 100%.
Bootstrap support for A2G9E0 as seed ortholog is 100%.

Group of orthologs #3. Best score 636 bits
Score difference with first non-orthologous sequence - C.trachomatis:636 T.vaginalis:636

O84716              	100.00%		A2E4A4              	100.00%
                    	       		A2EYV2              	99.36%
                    	       		A2ED62              	97.12%
                    	       		A2FLL6              	94.09%
                    	       		A2EKU1              	92.97%
                    	       		A2DSJ5              	8.79%
Bootstrap support for O84716 as seed ortholog is 100%.
Bootstrap support for A2E4A4 as seed ortholog is 100%.

Group of orthologs #4. Best score 631 bits
Score difference with first non-orthologous sequence - C.trachomatis:631 T.vaginalis:109

P17821              	100.00%		A2EKF3              	100.00%
                    	       		A2DCR4              	91.58%
                    	       		A2DIV4              	30.13%
Bootstrap support for P17821 as seed ortholog is 100%.
Bootstrap support for A2EKF3 as seed ortholog is 99%.

Group of orthologs #5. Best score 535 bits
Score difference with first non-orthologous sequence - C.trachomatis:372 T.vaginalis:451

P0C0Z7              	100.00%		A2F5J7              	100.00%
                    	       		A2ETD8              	93.95%
                    	       		A2DED2              	47.26%
Bootstrap support for P0C0Z7 as seed ortholog is 100%.
Bootstrap support for A2F5J7 as seed ortholog is 100%.

Group of orthologs #6. Best score 498 bits
Score difference with first non-orthologous sequence - C.trachomatis:498 T.vaginalis:498

O84848              	100.00%		A2FJB1              	100.00%
Bootstrap support for O84848 as seed ortholog is 100%.
Bootstrap support for A2FJB1 as seed ortholog is 100%.

Group of orthologs #7. Best score 438 bits
Score difference with first non-orthologous sequence - C.trachomatis:438 T.vaginalis:438

O84585              	100.00%		A2F347              	100.00%
Bootstrap support for O84585 as seed ortholog is 100%.
Bootstrap support for A2F347 as seed ortholog is 100%.

Group of orthologs #8. Best score 430 bits
Score difference with first non-orthologous sequence - C.trachomatis:430 T.vaginalis:430

O84755              	100.00%		A2EIF8              	100.00%
                    	       		A2DXX8              	46.25%
Bootstrap support for O84755 as seed ortholog is 100%.
Bootstrap support for A2EIF8 as seed ortholog is 100%.

Group of orthologs #9. Best score 423 bits
Score difference with first non-orthologous sequence - C.trachomatis:352 T.vaginalis:329

O84304              	100.00%		A2ECW1              	100.00%
                    	       		A2E0F1              	51.81%
                    	       		A2EA89              	38.66%
Bootstrap support for O84304 as seed ortholog is 100%.
Bootstrap support for A2ECW1 as seed ortholog is 100%.

Group of orthologs #10. Best score 347 bits
Score difference with first non-orthologous sequence - C.trachomatis:347 T.vaginalis:347

O84066              	100.00%		A2EZW4              	100.00%
                    	       		A2E721              	58.39%
                    	       		A2GAV3              	56.85%
Bootstrap support for O84066 as seed ortholog is 100%.
Bootstrap support for A2EZW4 as seed ortholog is 100%.

Group of orthologs #11. Best score 325 bits
Score difference with first non-orthologous sequence - C.trachomatis:202 T.vaginalis:325

O84310              	100.00%		A2ED49              	100.00%
Bootstrap support for O84310 as seed ortholog is 100%.
Bootstrap support for A2ED49 as seed ortholog is 100%.

Group of orthologs #12. Best score 324 bits
Score difference with first non-orthologous sequence - C.trachomatis:324 T.vaginalis:150

O84591              	100.00%		A2EP01              	100.00%
                    	       		A2ELB9              	58.03%
                    	       		A2EFN8              	48.81%
                    	       		A2E9S4              	47.54%
                    	       		A2EBB4              	46.74%
                    	       		A2E269              	46.26%
                    	       		Q5EFD8              	46.26%
Bootstrap support for O84591 as seed ortholog is 100%.
Bootstrap support for A2EP01 as seed ortholog is 99%.

Group of orthologs #13. Best score 319 bits
Score difference with first non-orthologous sequence - C.trachomatis:319 T.vaginalis:319

O84451              	100.00%		A2FJ97              	100.00%
Bootstrap support for O84451 as seed ortholog is 100%.
Bootstrap support for A2FJ97 as seed ortholog is 100%.

Group of orthologs #14. Best score 305 bits
Score difference with first non-orthologous sequence - C.trachomatis:305 T.vaginalis:305

P0CD78              	100.00%		A2DLF4              	100.00%
                    	       		A2F093              	97.34%
Bootstrap support for P0CD78 as seed ortholog is 100%.
Bootstrap support for A2DLF4 as seed ortholog is 100%.

Group of orthologs #15. Best score 293 bits
Score difference with first non-orthologous sequence - C.trachomatis:293 T.vaginalis:293

O84786              	100.00%		A2F719              	100.00%
Bootstrap support for O84786 as seed ortholog is 100%.
Bootstrap support for A2F719 as seed ortholog is 100%.

Group of orthologs #16. Best score 289 bits
Score difference with first non-orthologous sequence - C.trachomatis:289 T.vaginalis:289

P0CE21              	100.00%		A2FQR3              	100.00%
                    	       		A2DP65              	65.14%
Bootstrap support for P0CE21 as seed ortholog is 100%.
Bootstrap support for A2FQR3 as seed ortholog is 100%.

Group of orthologs #17. Best score 282 bits
Score difference with first non-orthologous sequence - C.trachomatis:282 T.vaginalis:282

O84823              	100.00%		A2DZU8              	100.00%
                    	       		A2FNJ6              	77.08%
                    	       		A2G3K2              	15.04%
Bootstrap support for O84823 as seed ortholog is 100%.
Bootstrap support for A2DZU8 as seed ortholog is 100%.

Group of orthologs #18. Best score 280 bits
Score difference with first non-orthologous sequence - C.trachomatis:280 T.vaginalis:67

O84797              	100.00%		A2EA54              	100.00%
Bootstrap support for O84797 as seed ortholog is 100%.
Bootstrap support for A2EA54 as seed ortholog is 87%.

Group of orthologs #19. Best score 277 bits
Score difference with first non-orthologous sequence - C.trachomatis:277 T.vaginalis:277

O84561              	100.00%		A2F0F6              	100.00%
                    	       		A2DBA4              	66.97%
Bootstrap support for O84561 as seed ortholog is 100%.
Bootstrap support for A2F0F6 as seed ortholog is 100%.

Group of orthologs #20. Best score 274 bits
Score difference with first non-orthologous sequence - C.trachomatis:274 T.vaginalis:274

O84188              	100.00%		A2EC78              	100.00%
                    	       		A2DBT5              	66.81%
                    	       		A2G0T4              	62.46%
Bootstrap support for O84188 as seed ortholog is 100%.
Bootstrap support for A2EC78 as seed ortholog is 100%.

Group of orthologs #21. Best score 272 bits
Score difference with first non-orthologous sequence - C.trachomatis:272 T.vaginalis:272

O84829              	100.00%		Q65ZG5              	100.00%
                    	       		A2DUL5              	96.23%
                    	       		O15568              	94.20%
Bootstrap support for O84829 as seed ortholog is 100%.
Bootstrap support for Q65ZG5 as seed ortholog is 100%.

Group of orthologs #22. Best score 272 bits
Score difference with first non-orthologous sequence - C.trachomatis:272 T.vaginalis:272

O84316              	100.00%		A2DKT1              	100.00%
                    	       		A2DEX5              	11.79%
Bootstrap support for O84316 as seed ortholog is 100%.
Bootstrap support for A2DKT1 as seed ortholog is 100%.

Group of orthologs #23. Best score 270 bits
Score difference with first non-orthologous sequence - C.trachomatis:270 T.vaginalis:128

O84831              	100.00%		A2FM20              	100.00%
                    	       		A2F1Z2              	21.62%
                    	       		A2ER24              	17.22%
                    	       		A2FDT5              	16.52%
                    	       		A2FTL0              	6.43%
Bootstrap support for O84831 as seed ortholog is 100%.
Bootstrap support for A2FM20 as seed ortholog is 99%.

Group of orthologs #24. Best score 269 bits
Score difference with first non-orthologous sequence - C.trachomatis:269 T.vaginalis:103

O84089              	100.00%		A2FCD1              	100.00%
                    	       		A2FUI7              	94.83%
                    	       		A2FBC9              	49.02%
                    	       		A2FZT7              	49.02%
                    	       		A2E3F9              	48.28%
                    	       		A2F259              	48.23%
                    	       		A2D7I8              	47.81%
                    	       		A2D7H3              	47.70%
                    	       		A2EFJ7              	5.91%
Bootstrap support for O84089 as seed ortholog is 100%.
Bootstrap support for A2FCD1 as seed ortholog is 99%.

Group of orthologs #25. Best score 269 bits
Score difference with first non-orthologous sequence - C.trachomatis:269 T.vaginalis:269

O84315              	100.00%		A2F0H0              	100.00%
Bootstrap support for O84315 as seed ortholog is 100%.
Bootstrap support for A2F0H0 as seed ortholog is 100%.

Group of orthologs #26. Best score 253 bits
Score difference with first non-orthologous sequence - C.trachomatis:253 T.vaginalis:253

O84828              	100.00%		A2FVK7              	100.00%
                    	       		A2D987              	93.45%
                    	       		A2EBX0              	88.73%
Bootstrap support for O84828 as seed ortholog is 100%.
Bootstrap support for A2FVK7 as seed ortholog is 100%.

Group of orthologs #27. Best score 252 bits
Score difference with first non-orthologous sequence - C.trachomatis:252 T.vaginalis:252

O84439              	100.00%		A2EAE3              	100.00%
Bootstrap support for O84439 as seed ortholog is 100%.
Bootstrap support for A2EAE3 as seed ortholog is 100%.

Group of orthologs #28. Best score 245 bits
Score difference with first non-orthologous sequence - C.trachomatis:245 T.vaginalis:245

O84094              	100.00%		A2ER05              	100.00%
Bootstrap support for O84094 as seed ortholog is 100%.
Bootstrap support for A2ER05 as seed ortholog is 100%.

Group of orthologs #29. Best score 239 bits
Score difference with first non-orthologous sequence - C.trachomatis:239 T.vaginalis:162

O84381              	100.00%		A2DMN2              	100.00%
                    	       		A2FJ30              	93.33%
                    	       		A2DH14              	60.00%
                    	       		A2E124              	28.05%
                    	       		A2FIP8              	20.23%
                    	       		A2FIP9              	20.00%
                    	       		A2G340              	19.54%
                    	       		A2G057              	19.08%
                    	       		A2EFE2              	18.85%
                    	       		A2FYF4              	18.85%
                    	       		A2GET8              	18.62%
                    	       		O96445              	18.16%
                    	       		A2FKC7              	17.24%
                    	       		A2EFX9              	10.57%
Bootstrap support for O84381 as seed ortholog is 100%.
Bootstrap support for A2DMN2 as seed ortholog is 100%.

Group of orthologs #30. Best score 237 bits
Score difference with first non-orthologous sequence - C.trachomatis:237 T.vaginalis:237

O84101              	100.00%		Q8IEV3              	100.00%
                    	       		A2F9L1              	69.15%
                    	       		A2DSU2              	36.70%
                    	       		A2F960              	23.14%
                    	       		A2EJA0              	14.89%
Bootstrap support for O84101 as seed ortholog is 100%.
Bootstrap support for Q8IEV3 as seed ortholog is 100%.

Group of orthologs #31. Best score 233 bits
Score difference with first non-orthologous sequence - C.trachomatis:109 T.vaginalis:233

O84309              	100.00%		A2ES57              	100.00%
                    	       		A2F133              	100.00%
Bootstrap support for O84309 as seed ortholog is 99%.
Bootstrap support for A2ES57 as seed ortholog is 100%.
Bootstrap support for A2F133 as seed ortholog is 100%.

Group of orthologs #32. Best score 231 bits
Score difference with first non-orthologous sequence - C.trachomatis:231 T.vaginalis:231

P0CE13              	100.00%		A2DHT2              	100.00%
                    	       		A2EM29              	100.00%
                    	       		A2GA05              	98.99%
                    	       		A2FNQ3              	98.99%
Bootstrap support for P0CE13 as seed ortholog is 100%.
Bootstrap support for A2DHT2 as seed ortholog is 100%.
Bootstrap support for A2EM29 as seed ortholog is 100%.

Group of orthologs #33. Best score 230 bits
Score difference with first non-orthologous sequence - C.trachomatis:230 T.vaginalis:166

O84352              	100.00%		A2G4U7              	100.00%
                    	       		A2G1U8              	43.45%
                    	       		A2F672              	36.48%
Bootstrap support for O84352 as seed ortholog is 100%.
Bootstrap support for A2G4U7 as seed ortholog is 99%.

Group of orthologs #34. Best score 221 bits
Score difference with first non-orthologous sequence - C.trachomatis:221 T.vaginalis:221

P0CE09              	100.00%		A2E7H8              	100.00%
                    	       		A2E3T5              	17.38%
                    	       		A2EN74              	7.74%
Bootstrap support for P0CE09 as seed ortholog is 100%.
Bootstrap support for A2E7H8 as seed ortholog is 100%.

Group of orthologs #35. Best score 218 bits
Score difference with first non-orthologous sequence - C.trachomatis:218 T.vaginalis:218

O84787              	100.00%		A2ECS1              	100.00%
Bootstrap support for O84787 as seed ortholog is 100%.
Bootstrap support for A2ECS1 as seed ortholog is 100%.

Group of orthologs #36. Best score 215 bits
Score difference with first non-orthologous sequence - C.trachomatis:86 T.vaginalis:15

O84614              	100.00%		A2F783              	100.00%
Bootstrap support for O84614 as seed ortholog is 97%.
Bootstrap support for A2F783 as seed ortholog is 63%.
Alternative seed ortholog is A2F0U7 (15 bits away from this cluster)

Group of orthologs #37. Best score 207 bits
Score difference with first non-orthologous sequence - C.trachomatis:207 T.vaginalis:207

O84297              	100.00%		A2FW50              	100.00%
                    	       		A2DV80              	93.74%
                    	       		A2EP31              	93.54%
                    	       		A2FHW2              	93.44%
Bootstrap support for O84297 as seed ortholog is 100%.
Bootstrap support for A2FW50 as seed ortholog is 100%.

Group of orthologs #38. Best score 207 bits
Score difference with first non-orthologous sequence - C.trachomatis:207 T.vaginalis:207

O84642              	100.00%		A2DLF1              	100.00%
                    	       		A2F7X5              	89.79%
                    	       		A2G7J5              	50.58%
Bootstrap support for O84642 as seed ortholog is 100%.
Bootstrap support for A2DLF1 as seed ortholog is 100%.

Group of orthologs #39. Best score 201 bits
Score difference with first non-orthologous sequence - C.trachomatis:201 T.vaginalis:114

O84266              	100.00%		A2FBL3              	100.00%
                    	       		A2D7Z2              	79.22%
                    	       		A2DEW5              	56.61%
                    	       		A2EII1              	42.39%
                    	       		A2FIU8              	42.11%
                    	       		A2DVE9              	41.66%
                    	       		A2GEK8              	34.18%
                    	       		A2DGJ2              	29.72%
                    	       		A2F6E0              	27.89%
                    	       		A2DKG1              	26.98%
                    	       		A2DZC8              	19.51%
                    	       		A2G1G1              	17.78%
Bootstrap support for O84266 as seed ortholog is 100%.
Bootstrap support for A2FBL3 as seed ortholog is 99%.

Group of orthologs #40. Best score 200 bits
Score difference with first non-orthologous sequence - C.trachomatis:200 T.vaginalis:200

O84734              	100.00%		A2ERB4              	100.00%
                    	       		A2FSM1              	95.87%
Bootstrap support for O84734 as seed ortholog is 100%.
Bootstrap support for A2ERB4 as seed ortholog is 100%.

Group of orthologs #41. Best score 200 bits
Score difference with first non-orthologous sequence - C.trachomatis:200 T.vaginalis:200

O84834              	100.00%		A2DI13              	100.00%
Bootstrap support for O84834 as seed ortholog is 100%.
Bootstrap support for A2DI13 as seed ortholog is 100%.

Group of orthologs #42. Best score 193 bits
Score difference with first non-orthologous sequence - C.trachomatis:193 T.vaginalis:193

O84444              	100.00%		A2ECS2              	100.00%
                    	       		A2ER26              	100.00%
                    	       		A2EAD8              	11.91%
Bootstrap support for O84444 as seed ortholog is 100%.
Bootstrap support for A2ECS2 as seed ortholog is 100%.
Bootstrap support for A2ER26 as seed ortholog is 100%.

Group of orthologs #43. Best score 191 bits
Score difference with first non-orthologous sequence - C.trachomatis:191 T.vaginalis:31

O84345              	100.00%		A2DRV7              	100.00%
                    	       		A2DN65              	29.78%
                    	       		A2DSB1              	23.41%
                    	       		A2DUI6              	18.96%
Bootstrap support for O84345 as seed ortholog is 100%.
Bootstrap support for A2DRV7 as seed ortholog is 84%.

Group of orthologs #44. Best score 181 bits
Score difference with first non-orthologous sequence - C.trachomatis:181 T.vaginalis:181

O84613              	100.00%		A2GFQ7              	100.00%
Bootstrap support for O84613 as seed ortholog is 100%.
Bootstrap support for A2GFQ7 as seed ortholog is 100%.

Group of orthologs #45. Best score 177 bits
Score difference with first non-orthologous sequence - C.trachomatis:177 T.vaginalis:177

O84402              	100.00%		A2FUQ4              	100.00%
Bootstrap support for O84402 as seed ortholog is 100%.
Bootstrap support for A2FUQ4 as seed ortholog is 100%.

Group of orthologs #46. Best score 175 bits
Score difference with first non-orthologous sequence - C.trachomatis:56 T.vaginalis:63

O84028              	100.00%		A2E0A3              	100.00%
                    	       		A2FQ92              	75.54%
                    	       		A2F1E7              	31.40%
Bootstrap support for O84028 as seed ortholog is 94%.
Bootstrap support for A2E0A3 as seed ortholog is 95%.

Group of orthologs #47. Best score 175 bits
Score difference with first non-orthologous sequence - C.trachomatis:175 T.vaginalis:175

O84196              	100.00%		A2E5L2              	100.00%
                    	       		A2DZV5              	94.95%
                    	       		A2FMJ1              	65.85%
Bootstrap support for O84196 as seed ortholog is 100%.
Bootstrap support for A2E5L2 as seed ortholog is 100%.

Group of orthologs #48. Best score 174 bits
Score difference with first non-orthologous sequence - C.trachomatis:174 T.vaginalis:174

O84332              	100.00%		A2FT29              	100.00%
                    	       		A2EGX9              	98.80%
Bootstrap support for O84332 as seed ortholog is 100%.
Bootstrap support for A2FT29 as seed ortholog is 100%.

Group of orthologs #49. Best score 174 bits
Score difference with first non-orthologous sequence - C.trachomatis:174 T.vaginalis:98

O84650              	100.00%		A2FJB5              	100.00%
Bootstrap support for O84650 as seed ortholog is 100%.
Bootstrap support for A2FJB5 as seed ortholog is 99%.

Group of orthologs #50. Best score 170 bits
Score difference with first non-orthologous sequence - C.trachomatis:170 T.vaginalis:84

P0CD71              	100.00%		A2DSF6              	100.00%
                    	       		A2DD88              	48.95%
                    	       		A2FH31              	38.99%
                    	       		A2EDI9              	17.53%
Bootstrap support for P0CD71 as seed ortholog is 100%.
Bootstrap support for A2DSF6 as seed ortholog is 96%.

Group of orthologs #51. Best score 166 bits
Score difference with first non-orthologous sequence - C.trachomatis:166 T.vaginalis:124

O84608              	100.00%		A2FEE9              	100.00%
                    	       		A2ESJ9              	60.76%
                    	       		Q8IEV2              	59.07%
                    	       		Q6UJG4              	58.65%
                    	       		A2G9K3              	58.23%
                    	       		A2DXW7              	56.96%
                    	       		A2GAU8              	55.70%
                    	       		A2EFN5              	14.35%
Bootstrap support for O84608 as seed ortholog is 100%.
Bootstrap support for A2FEE9 as seed ortholog is 99%.

Group of orthologs #52. Best score 162 bits
Score difference with first non-orthologous sequence - C.trachomatis:162 T.vaginalis:162

O84874              	100.00%		A2ES64              	100.00%
                    	       		A2ECR2              	66.04%
Bootstrap support for O84874 as seed ortholog is 100%.
Bootstrap support for A2ES64 as seed ortholog is 100%.

Group of orthologs #53. Best score 159 bits
Score difference with first non-orthologous sequence - C.trachomatis:159 T.vaginalis:159

O84098              	100.00%		A2DGI5              	100.00%
Bootstrap support for O84098 as seed ortholog is 100%.
Bootstrap support for A2DGI5 as seed ortholog is 100%.

Group of orthologs #54. Best score 156 bits
Score difference with first non-orthologous sequence - C.trachomatis:156 T.vaginalis:156

O84123              	100.00%		A2G3F8              	100.00%
Bootstrap support for O84123 as seed ortholog is 100%.
Bootstrap support for A2G3F8 as seed ortholog is 100%.

Group of orthologs #55. Best score 150 bits
Score difference with first non-orthologous sequence - C.trachomatis:150 T.vaginalis:150

O84035              	100.00%		A2DQL6              	100.00%
Bootstrap support for O84035 as seed ortholog is 100%.
Bootstrap support for A2DQL6 as seed ortholog is 100%.

Group of orthologs #56. Best score 147 bits
Score difference with first non-orthologous sequence - C.trachomatis:147 T.vaginalis:147

O84727              	100.00%		A2DVE4              	100.00%
                    	       		A2DNM4              	94.49%
                    	       		A2E2R4              	93.94%
                    	       		A2DUN8              	14.88%
Bootstrap support for O84727 as seed ortholog is 100%.
Bootstrap support for A2DVE4 as seed ortholog is 100%.

Group of orthologs #57. Best score 146 bits
Score difference with first non-orthologous sequence - C.trachomatis:146 T.vaginalis:146

P0CD72              	100.00%		A2E7V8              	100.00%
                    	       		A2E178              	65.68%
Bootstrap support for P0CD72 as seed ortholog is 100%.
Bootstrap support for A2E7V8 as seed ortholog is 100%.

Group of orthologs #58. Best score 137 bits
Score difference with first non-orthologous sequence - C.trachomatis:137 T.vaginalis:137

O84732              	100.00%		A2FJ90              	100.00%
                    	       		A2DYG8              	21.45%
                    	       		A2FSW9              	13.64%
                    	       		A2E1G4              	12.22%
                    	       		A2E3V9              	12.07%
                    	       		A2DSU9              	12.00%
                    	       		A2DY32              	11.22%
                    	       		A2FJ70              	11.01%
                    	       		A2DIF5              	10.30%
                    	       		A2FF20              	10.09%
Bootstrap support for O84732 as seed ortholog is 100%.
Bootstrap support for A2FJ90 as seed ortholog is 100%.

Group of orthologs #59. Best score 129 bits
Score difference with first non-orthologous sequence - C.trachomatis:129 T.vaginalis:129

O84720              	100.00%		A2EDI4              	100.00%
Bootstrap support for O84720 as seed ortholog is 100%.
Bootstrap support for A2EDI4 as seed ortholog is 100%.

Group of orthologs #60. Best score 128 bits
Score difference with first non-orthologous sequence - C.trachomatis:23 T.vaginalis:128

O84260              	100.00%		Q95WG9              	100.00%
                    	       		A2DHK3              	60.03%
Bootstrap support for O84260 as seed ortholog is 28%.
Alternative seed ortholog is O84693 (23 bits away from this cluster)
Bootstrap support for Q95WG9 as seed ortholog is 100%.

Group of orthologs #61. Best score 126 bits
Score difference with first non-orthologous sequence - C.trachomatis:126 T.vaginalis:126

O84546              	100.00%		A2DLE4              	100.00%
Bootstrap support for O84546 as seed ortholog is 100%.
Bootstrap support for A2DLE4 as seed ortholog is 100%.

Group of orthologs #62. Best score 121 bits
Score difference with first non-orthologous sequence - C.trachomatis:121 T.vaginalis:121

O84754              	100.00%		A2EVS2              	100.00%
Bootstrap support for O84754 as seed ortholog is 100%.
Bootstrap support for A2EVS2 as seed ortholog is 100%.

Group of orthologs #63. Best score 118 bits
Score difference with first non-orthologous sequence - C.trachomatis:118 T.vaginalis:9

O84130              	100.00%		A2FYU1              	100.00%
                    	       		A2FQ69              	41.90%
Bootstrap support for O84130 as seed ortholog is 100%.
Bootstrap support for A2FYU1 as seed ortholog is 61%.
Alternative seed ortholog is A2DKQ8 (9 bits away from this cluster)

Group of orthologs #64. Best score 115 bits
Score difference with first non-orthologous sequence - C.trachomatis:115 T.vaginalis:115

O84649              	100.00%		A2DNF5              	100.00%
                    	       		A2FIZ8              	82.48%
                    	       		A2FIV5              	18.91%
Bootstrap support for O84649 as seed ortholog is 100%.
Bootstrap support for A2DNF5 as seed ortholog is 100%.

Group of orthologs #65. Best score 113 bits
Score difference with first non-orthologous sequence - C.trachomatis:113 T.vaginalis:113

P55137              	100.00%		A2ELU0              	100.00%
                    	       		A2FNS0              	7.75%
Bootstrap support for P55137 as seed ortholog is 100%.
Bootstrap support for A2ELU0 as seed ortholog is 100%.

Group of orthologs #66. Best score 112 bits
Score difference with first non-orthologous sequence - C.trachomatis:112 T.vaginalis:112

O84296              	100.00%		A2EF90              	100.00%
                    	       		A2D7H9              	44.70%
                    	       		A2FS11              	44.70%
                    	       		A2EQX2              	44.37%
                    	       		A2FJR3              	43.38%
                    	       		O43957              	42.38%
                    	       		A2EGG9              	39.74%
Bootstrap support for O84296 as seed ortholog is 100%.
Bootstrap support for A2EF90 as seed ortholog is 100%.

Group of orthologs #67. Best score 111 bits
Score difference with first non-orthologous sequence - C.trachomatis:111 T.vaginalis:111

O84208              	100.00%		A2EF58              	100.00%
O84210              	100.00%		A2DRM7              	100.00%
                    	       		A2E9H3              	99.09%
                    	       		O61068              	98.48%
                    	       		A2ENZ7              	41.29%
                    	       		A2FQ91              	33.68%
                    	       		A2E2V1              	28.39%
                    	       		A2DM03              	5.03%
Bootstrap support for O84208 as seed ortholog is 100%.
Bootstrap support for O84210 as seed ortholog is 100%.
Bootstrap support for A2EF58 as seed ortholog is 100%.
Bootstrap support for A2DRM7 as seed ortholog is 100%.

Group of orthologs #68. Best score 111 bits
Score difference with first non-orthologous sequence - C.trachomatis:111 T.vaginalis:111

O84530              	100.00%		A2E6Z8              	100.00%
Bootstrap support for O84530 as seed ortholog is 100%.
Bootstrap support for A2E6Z8 as seed ortholog is 100%.

Group of orthologs #69. Best score 108 bits
Score difference with first non-orthologous sequence - C.trachomatis:108 T.vaginalis:108

O84033              	100.00%		A2FL77              	100.00%
                    	       		A2FSS5              	79.27%
                    	       		A2F0T4              	36.36%
                    	       		A2DKP9              	14.91%
Bootstrap support for O84033 as seed ortholog is 100%.
Bootstrap support for A2FL77 as seed ortholog is 100%.

Group of orthologs #70. Best score 108 bits
Score difference with first non-orthologous sequence - C.trachomatis:108 T.vaginalis:108

O84822              	100.00%		A2EV45              	100.00%
                    	       		A2E501              	89.86%
Bootstrap support for O84822 as seed ortholog is 100%.
Bootstrap support for A2EV45 as seed ortholog is 100%.

Group of orthologs #71. Best score 108 bits
Score difference with first non-orthologous sequence - C.trachomatis:108 T.vaginalis:108

O84599              	100.00%		A2F104              	100.00%
                    	       		A2F8Q0              	51.09%
Bootstrap support for O84599 as seed ortholog is 100%.
Bootstrap support for A2F104 as seed ortholog is 100%.

Group of orthologs #72. Best score 104 bits
Score difference with first non-orthologous sequence - C.trachomatis:104 T.vaginalis:104

P36424              	100.00%		A2D8X2              	100.00%
                    	       		A2DRG0              	74.72%
Bootstrap support for P36424 as seed ortholog is 100%.
Bootstrap support for A2D8X2 as seed ortholog is 100%.

Group of orthologs #73. Best score 104 bits
Score difference with first non-orthologous sequence - C.trachomatis:104 T.vaginalis:49

O84353              	100.00%		A2E4U5              	100.00%
                    	       		A2F2J3              	75.59%
Bootstrap support for O84353 as seed ortholog is 100%.
Bootstrap support for A2E4U5 as seed ortholog is 97%.

Group of orthologs #74. Best score 104 bits
Score difference with first non-orthologous sequence - C.trachomatis:104 T.vaginalis:104

O84456              	100.00%		A2EKJ5              	100.00%
Bootstrap support for O84456 as seed ortholog is 100%.
Bootstrap support for A2EKJ5 as seed ortholog is 100%.

Group of orthologs #75. Best score 103 bits
Score difference with first non-orthologous sequence - C.trachomatis:103 T.vaginalis:103

O84384              	100.00%		A2EY89              	100.00%
                    	       		A2EZM9              	9.38%
Bootstrap support for O84384 as seed ortholog is 100%.
Bootstrap support for A2EY89 as seed ortholog is 100%.

Group of orthologs #76. Best score 102 bits
Score difference with first non-orthologous sequence - C.trachomatis:38 T.vaginalis:41

O84660              	100.00%		A2DNW6              	100.00%
                    	       		A2DNW8              	87.14%
                    	       		A2EN45              	46.30%
                    	       		A2FTE0              	45.82%
                    	       		A2F8U6              	44.86%
                    	       		A2GNF3              	34.24%
                    	       		A2F8P6              	26.69%
                    	       		A2FE71              	25.40%
                    	       		A2FPE3              	24.60%
                    	       		A2G725              	23.47%
                    	       		A2DJ85              	19.77%
                    	       		A2DMS3              	8.20%
Bootstrap support for O84660 as seed ortholog is 88%.
Bootstrap support for A2DNW6 as seed ortholog is 95%.

Group of orthologs #77. Best score 98 bits
Score difference with first non-orthologous sequence - C.trachomatis:98 T.vaginalis:98

O84219              	100.00%		A2FBY7              	100.00%
                    	       		A2DFU7              	78.98%
Bootstrap support for O84219 as seed ortholog is 100%.
Bootstrap support for A2FBY7 as seed ortholog is 100%.

Group of orthologs #78. Best score 97 bits
Score difference with first non-orthologous sequence - C.trachomatis:97 T.vaginalis:97

O84777              	100.00%		A2F2T3              	100.00%
                    	       		A2F5T3              	100.00%
                    	       		A2G3K3              	91.03%
                    	       		A2DX41              	35.34%
Bootstrap support for O84777 as seed ortholog is 100%.
Bootstrap support for A2F2T3 as seed ortholog is 100%.
Bootstrap support for A2F5T3 as seed ortholog is 100%.

Group of orthologs #79. Best score 96 bits
Score difference with first non-orthologous sequence - C.trachomatis:96 T.vaginalis:96

O84220              	100.00%		A2G1C0              	100.00%
                    	       		A2DUR7              	71.00%
                    	       		A2ETN2              	39.27%
Bootstrap support for O84220 as seed ortholog is 100%.
Bootstrap support for A2G1C0 as seed ortholog is 100%.

Group of orthologs #80. Best score 96 bits
Score difference with first non-orthologous sequence - C.trachomatis:96 T.vaginalis:96

O84460              	100.00%		A2G8P4              	100.00%
Bootstrap support for O84460 as seed ortholog is 100%.
Bootstrap support for A2G8P4 as seed ortholog is 100%.

Group of orthologs #81. Best score 95 bits
Score difference with first non-orthologous sequence - C.trachomatis:95 T.vaginalis:38

O84680              	100.00%		A2DI34              	100.00%
                    	       		A2DHE8              	60.92%
                    	       		A2EKR5              	37.98%
                    	       		A2EU91              	36.11%
                    	       		A2ETK3              	35.46%
                    	       		A2FT91              	35.02%
                    	       		A2GCT3              	34.91%
                    	       		A2DBR9              	34.58%
                    	       		A2E705              	32.82%
                    	       		A2ESJ5              	32.27%
                    	       		A2DHM8              	31.94%
                    	       		A2F807              	30.85%
                    	       		A2FK34              	30.19%
                    	       		A2ESQ5              	29.97%
                    	       		A2DBY9              	28.98%
                    	       		A2F5P8              	28.87%
                    	       		A2FGW3              	28.21%
                    	       		A2G3H5              	20.75%
                    	       		A2DTF0              	13.72%
                    	       		A2F029              	12.62%
                    	       		A2D7M3              	12.40%
                    	       		A2ET53              	12.40%
                    	       		A2DPY7              	12.07%
                    	       		A2ETF3              	11.86%
                    	       		A2EN63              	11.75%
                    	       		A2EFB7              	11.64%
                    	       		A2FDI8              	11.53%
                    	       		A2E6I9              	11.53%
                    	       		A2EMW5              	11.53%
                    	       		A2ERA7              	11.31%
                    	       		A2EA15              	11.31%
                    	       		A2FMX7              	11.31%
                    	       		A2D7C9              	11.31%
                    	       		A2ERI4              	11.20%
                    	       		A2FZA3              	10.54%
                    	       		A2D7H7              	10.43%
                    	       		A2FBB6              	10.43%
                    	       		A2FLT8              	10.43%
                    	       		A2E2X1              	10.43%
                    	       		A2DHV0              	10.32%
                    	       		A2G0N4              	10.32%
                    	       		A2DP40              	10.32%
                    	       		A2FBN8              	10.32%
                    	       		A2DUF1              	10.21%
                    	       		A2EI57              	9.99%
                    	       		A2DMH0              	9.88%
                    	       		A2EUJ6              	9.44%
                    	       		A2EJ14              	9.33%
                    	       		A2EYI5              	9.33%
                    	       		A2F9P2              	9.33%
                    	       		A2FQP0              	9.22%
                    	       		A2EBI4              	9.11%
                    	       		A2EWC2              	9.11%
                    	       		A2D9H3              	9.00%
                    	       		A2EB67              	9.00%
                    	       		A2E0S1              	8.89%
                    	       		A2E194              	8.89%
                    	       		A2ECN9              	8.89%
                    	       		A2EM22              	8.89%
                    	       		A2GAV1              	8.67%
                    	       		A2DWE7              	8.56%
                    	       		A2EZM5              	8.56%
                    	       		A2FV13              	8.45%
                    	       		A2E9I7              	8.34%
                    	       		A2EP26              	8.23%
                    	       		A2ET81              	8.23%
                    	       		A2EIG6              	8.12%
                    	       		A2F3L4              	8.01%
                    	       		A2G288              	8.01%
                    	       		A2EJD6              	8.01%
                    	       		A2FTS4              	8.01%
                    	       		A2E7I6              	7.90%
                    	       		A2E275              	7.79%
                    	       		A2ESP5              	7.79%
                    	       		A2EWX3              	7.79%
                    	       		A2EE66              	7.68%
                    	       		A2FHU2              	7.68%
                    	       		A2F8Y4              	7.57%
                    	       		A2DW97              	7.46%
                    	       		A2G7K5              	7.46%
                    	       		A2F749              	7.24%
                    	       		A2EEZ5              	7.24%
                    	       		A2ETC0              	7.24%
                    	       		A2FXU4              	7.24%
                    	       		A2DH03              	7.24%
                    	       		A2FCK2              	7.24%
                    	       		A2E5K8              	7.14%
                    	       		A2DLD2              	7.14%
                    	       		A2DNV1              	7.14%
                    	       		A2G1L3              	7.14%
                    	       		A2DWP1              	7.03%
                    	       		A2E535              	6.92%
                    	       		A2EPI6              	6.92%
                    	       		A2FE66              	6.92%
                    	       		A2DA20              	6.92%
                    	       		A2DW86              	6.92%
                    	       		A2FUL1              	6.92%
                    	       		A2DKX0              	6.81%
                    	       		A2ED12              	6.81%
                    	       		A2EX40              	6.81%
                    	       		A2FDK2              	6.81%
                    	       		A2DEB4              	6.70%
                    	       		A2FDD2              	6.70%
                    	       		A2ECT2              	6.70%
                    	       		A2FKC9              	6.70%
                    	       		A2F3K9              	6.59%
                    	       		A2EIZ5              	6.59%
                    	       		A2EW53              	6.59%
                    	       		A2E474              	6.59%
                    	       		A2EJX1              	6.59%
                    	       		A2FBT5              	6.59%
                    	       		A2EJW2              	6.48%
                    	       		A2GCH6              	6.37%
                    	       		A2EAS8              	6.37%
                    	       		A2ERR6              	6.37%
                    	       		A2DV71              	6.37%
                    	       		A2E987              	6.37%
                    	       		A2EP88              	6.37%
                    	       		A2F0P6              	6.37%
                    	       		A2EJ98              	6.26%
                    	       		A2D784              	6.26%
                    	       		A2EJ00              	6.26%
                    	       		A2E0G9              	6.15%
                    	       		A2DLX3              	6.15%
                    	       		A2E492              	6.15%
                    	       		A2EED1              	6.15%
                    	       		A2F9M7              	6.04%
                    	       		A2D9C1              	6.04%
                    	       		A2FAW3              	6.04%
                    	       		A2FDL5              	6.04%
                    	       		A2FLX7              	5.93%
                    	       		A2FZD7              	5.93%
                    	       		A2FYT0              	5.93%
                    	       		A2DB15              	5.93%
                    	       		A2F8W1              	5.82%
                    	       		A2FPF2              	5.82%
                    	       		A2FF57              	5.82%
                    	       		A2GB48              	5.82%
                    	       		A2DY61              	5.82%
                    	       		A2E1S0              	5.82%
                    	       		A2DQE7              	5.71%
                    	       		A2F1J5              	5.60%
                    	       		A2DL59              	5.60%
                    	       		A2EB76              	5.60%
                    	       		A2ETG3              	5.60%
                    	       		A2EB11              	5.49%
                    	       		A2G140              	5.49%
                    	       		A2GRW7              	5.49%
                    	       		A2DCS5              	5.38%
                    	       		A2E7E2              	5.38%
                    	       		A2E9L0              	5.38%
                    	       		A2FZ96              	5.38%
                    	       		A2G139              	5.38%
                    	       		A2E8U1              	5.38%
                    	       		A2FNQ5              	5.38%
                    	       		A2G3R6              	5.38%
                    	       		A2DQE8              	5.38%
                    	       		A2EID8              	5.27%
                    	       		A2F0I9              	5.27%
                    	       		A2F4A4              	5.27%
                    	       		A2G069              	5.27%
                    	       		A2D884              	5.16%
                    	       		A2DHQ7              	5.16%
                    	       		A2DLE7              	5.16%
                    	       		A2E224              	5.16%
                    	       		A2EIC5              	5.16%
                    	       		A2FGX2              	5.16%
                    	       		A2EE93              	5.16%
                    	       		A2FHJ2              	5.16%
                    	       		A2G138              	5.16%
                    	       		A2DMN5              	5.05%
                    	       		A2E8B0              	5.05%
                    	       		A2F9L5              	5.05%
                    	       		A2FIJ5              	5.05%
                    	       		A2DPA3              	5.05%
                    	       		A2DVS0              	5.05%
                    	       		A2F9L4              	5.05%
                    	       		A2FMG9              	5.05%
                    	       		A2FYI7              	5.05%
                    	       		A2FZC2              	5.05%
                    	       		A2DHJ1              	5.05%
                    	       		A2G0T7              	5.05%
                    	       		A2G3J0              	5.05%
Bootstrap support for O84680 as seed ortholog is 100%.
Bootstrap support for A2DI34 as seed ortholog is 88%.

Group of orthologs #82. Best score 95 bits
Score difference with first non-orthologous sequence - C.trachomatis:95 T.vaginalis:30

O84578              	100.00%		A2FK66              	100.00%
                    	       		A2FSC5              	40.10%
                    	       		A2FCF5              	39.00%
                    	       		A2F8Y2              	13.49%
                    	       		A2EWP7              	11.42%
                    	       		A2DYZ1              	9.48%
Bootstrap support for O84578 as seed ortholog is 100%.
Bootstrap support for A2FK66 as seed ortholog is 76%.

Group of orthologs #83. Best score 94 bits
Score difference with first non-orthologous sequence - C.trachomatis:94 T.vaginalis:94

O84851              	100.00%		A2F5I8              	100.00%
Bootstrap support for O84851 as seed ortholog is 100%.
Bootstrap support for A2F5I8 as seed ortholog is 100%.

Group of orthologs #84. Best score 94 bits
Score difference with first non-orthologous sequence - C.trachomatis:94 T.vaginalis:51

O84191              	100.00%		A2GK91              	100.00%
Bootstrap support for O84191 as seed ortholog is 100%.
Bootstrap support for A2GK91 as seed ortholog is 96%.

Group of orthologs #85. Best score 93 bits
Score difference with first non-orthologous sequence - C.trachomatis:93 T.vaginalis:93

O84200              	100.00%		A2D8I5              	100.00%
Bootstrap support for O84200 as seed ortholog is 100%.
Bootstrap support for A2D8I5 as seed ortholog is 100%.

Group of orthologs #86. Best score 91 bits
Score difference with first non-orthologous sequence - C.trachomatis:91 T.vaginalis:91

O84665              	100.00%		A2EYQ7              	100.00%
Bootstrap support for O84665 as seed ortholog is 100%.
Bootstrap support for A2EYQ7 as seed ortholog is 100%.

Group of orthologs #87. Best score 89 bits
Score difference with first non-orthologous sequence - C.trachomatis:89 T.vaginalis:22

P38004              	100.00%		A2E8N7              	100.00%
Bootstrap support for P38004 as seed ortholog is 100%.
Bootstrap support for A2E8N7 as seed ortholog is 75%.

Group of orthologs #88. Best score 89 bits
Score difference with first non-orthologous sequence - C.trachomatis:89 T.vaginalis:89

O84358              	100.00%		A2EVN6              	100.00%
Bootstrap support for O84358 as seed ortholog is 100%.
Bootstrap support for A2EVN6 as seed ortholog is 100%.

Group of orthologs #89. Best score 89 bits
Score difference with first non-orthologous sequence - C.trachomatis:89 T.vaginalis:89

O84212              	100.00%		A2GPY4              	100.00%
Bootstrap support for O84212 as seed ortholog is 100%.
Bootstrap support for A2GPY4 as seed ortholog is 100%.

Group of orthologs #90. Best score 88 bits
Score difference with first non-orthologous sequence - C.trachomatis:88 T.vaginalis:88

O84843              	100.00%		A2DJE6              	100.00%
Bootstrap support for O84843 as seed ortholog is 100%.
Bootstrap support for A2DJE6 as seed ortholog is 100%.

Group of orthologs #91. Best score 86 bits
Score difference with first non-orthologous sequence - C.trachomatis:86 T.vaginalis:86

O84782              	100.00%		A2DYJ7              	100.00%
                    	       		A2D9P8              	6.34%
Bootstrap support for O84782 as seed ortholog is 100%.
Bootstrap support for A2DYJ7 as seed ortholog is 100%.

Group of orthologs #92. Best score 85 bits
Score difference with first non-orthologous sequence - C.trachomatis:85 T.vaginalis:85

O84139              	100.00%		A2EIG0              	100.00%
Bootstrap support for O84139 as seed ortholog is 100%.
Bootstrap support for A2EIG0 as seed ortholog is 100%.

Group of orthologs #93. Best score 85 bits
Score difference with first non-orthologous sequence - C.trachomatis:85 T.vaginalis:85

O84847              	100.00%		A2FJA9              	100.00%
Bootstrap support for O84847 as seed ortholog is 100%.
Bootstrap support for A2FJA9 as seed ortholog is 100%.

Group of orthologs #94. Best score 84 bits
Score difference with first non-orthologous sequence - C.trachomatis:84 T.vaginalis:84

O84508              	100.00%		A2DTU7              	100.00%
                    	       		A2G4P3              	100.00%
                    	       		A2DED9              	94.87%
Bootstrap support for O84508 as seed ortholog is 100%.
Bootstrap support for A2DTU7 as seed ortholog is 100%.
Bootstrap support for A2G4P3 as seed ortholog is 100%.

Group of orthologs #95. Best score 84 bits
Score difference with first non-orthologous sequence - C.trachomatis:84 T.vaginalis:84

O84547              	100.00%		A2EJM3              	100.00%
Bootstrap support for O84547 as seed ortholog is 100%.
Bootstrap support for A2EJM3 as seed ortholog is 100%.

Group of orthologs #96. Best score 81 bits
Score difference with first non-orthologous sequence - C.trachomatis:30 T.vaginalis:81

O84695              	100.00%		A2E762              	100.00%
O84205              	13.42%		A2ERI5              	94.65%
O84132              	6.28%		A2DUV6              	33.06%
                    	       		A2F5D6              	31.69%
                    	       		A2DZX8              	5.35%
Bootstrap support for O84695 as seed ortholog is 82%.
Bootstrap support for A2E762 as seed ortholog is 100%.

Group of orthologs #97. Best score 80 bits
Score difference with first non-orthologous sequence - C.trachomatis:80 T.vaginalis:80

O84391              	100.00%		A2FXE9              	100.00%
                    	       		A2EHD7              	30.47%
Bootstrap support for O84391 as seed ortholog is 100%.
Bootstrap support for A2FXE9 as seed ortholog is 100%.

Group of orthologs #98. Best score 79 bits
Score difference with first non-orthologous sequence - C.trachomatis:79 T.vaginalis:79

O84803              	100.00%		A2FA29              	100.00%
                    	       		A2DBM0              	89.30%
                    	       		A2DRK0              	49.83%
Bootstrap support for O84803 as seed ortholog is 100%.
Bootstrap support for A2FA29 as seed ortholog is 100%.

Group of orthologs #99. Best score 79 bits
Score difference with first non-orthologous sequence - C.trachomatis:79 T.vaginalis:12

P0C0Z8              	100.00%		A2EQM2              	100.00%
Bootstrap support for P0C0Z8 as seed ortholog is 100%.
Bootstrap support for A2EQM2 as seed ortholog is 76%.

Group of orthologs #100. Best score 78 bits
Score difference with first non-orthologous sequence - C.trachomatis:78 T.vaginalis:78

O84415              	100.00%		A2DV13              	100.00%
O84710              	100.00%		A2F7W5              	100.00%
                    	       		A2FD21              	100.00%
                    	       		A2F4H9              	27.88%
                    	       		A2GDE2              	26.89%
                    	       		A2FXY8              	26.08%
Bootstrap support for O84415 as seed ortholog is 100%.
Bootstrap support for O84710 as seed ortholog is 100%.
Bootstrap support for A2DV13 as seed ortholog is 100%.
Bootstrap support for A2F7W5 as seed ortholog is 100%.
Bootstrap support for A2FD21 as seed ortholog is 100%.

Group of orthologs #101. Best score 77 bits
Score difference with first non-orthologous sequence - C.trachomatis:10 T.vaginalis:77

O84696              	100.00%		A2GEK9              	100.00%
O84204              	100.00%		A2G1W9              	100.00%
                    	       		A2EXS0              	70.33%
                    	       		A2E808              	69.57%
                    	       		A2DKG0              	62.32%
                    	       		A2F318              	55.88%
                    	       		A2FZ98              	54.91%
                    	       		A2FZA1              	54.11%
                    	       		A2EJ73              	53.14%
                    	       		A2DXR7              	52.98%
                    	       		A2GEK7              	50.89%
                    	       		A2F7Z3              	49.76%
                    	       		A2GDH3              	45.57%
                    	       		A2EFV2              	43.48%
                    	       		A2EB14              	42.03%
                    	       		A2GG94              	41.39%
                    	       		A2DGJ4              	37.32%
                    	       		A2DL12              	33.25%
                    	       		A2FBV4              	30.76%
                    	       		A2DZG5              	26.89%
                    	       		A2EXR9              	26.89%
                    	       		A2FZA2              	25.93%
                    	       		A2FZA0              	16.75%
Bootstrap support for O84696 as seed ortholog is 62%.
Alternative seed ortholog is O84071 (10 bits away from this cluster)
Bootstrap support for O84204 as seed ortholog is 50%.
Alternative seed ortholog is O84071 (10 bits away from this cluster)
Bootstrap support for A2GEK9 as seed ortholog is 100%.
Bootstrap support for A2G1W9 as seed ortholog is 100%.

Group of orthologs #102. Best score 76 bits
Score difference with first non-orthologous sequence - C.trachomatis:76 T.vaginalis:27

O84781              	100.00%		A2G7N2              	100.00%
                    	       		A2EKG8              	86.22%
                    	       		A2ELA0              	47.95%
                    	       		A2FYY9              	45.21%
                    	       		A2EMX3              	40.85%
                    	       		A2ERH8              	38.28%
                    	       		A2F1K1              	31.75%
                    	       		A2E6I4              	27.72%
                    	       		A2E2S2              	17.89%
                    	       		A2EEI6              	17.16%
                    	       		A2EE22              	17.00%
                    	       		A2E5T7              	16.92%
                    	       		A2F212              	15.39%
                    	       		A2DQF3              	14.99%
                    	       		A2DBI5              	8.14%
                    	       		A2F809              	5.40%
Bootstrap support for O84781 as seed ortholog is 100%.
Bootstrap support for A2G7N2 as seed ortholog is 72%.
Alternative seed ortholog is A2DIV2 (27 bits away from this cluster)

Group of orthologs #103. Best score 76 bits
Score difference with first non-orthologous sequence - C.trachomatis:76 T.vaginalis:11

O84544              	100.00%		A2FXM7              	100.00%
                    	       		A2FZX1              	67.06%
                    	       		A2EFR4              	14.71%
                    	       		Q8IEV4              	11.76%
                    	       		A2F9M6              	10.59%
                    	       		A2F5G9              	10.59%
                    	       		A2E3X4              	8.24%
                    	       		Q6IV59              	7.65%
                    	       		A2FFZ0              	7.65%
                    	       		A2FZW6              	7.06%
                    	       		A2FVZ8              	5.88%
                    	       		A2G1V3              	5.88%
                    	       		A2FWW5              	5.29%
Bootstrap support for O84544 as seed ortholog is 100%.
Bootstrap support for A2FXM7 as seed ortholog is 72%.
Alternative seed ortholog is A2EBQ5 (11 bits away from this cluster)

Group of orthologs #104. Best score 76 bits
Score difference with first non-orthologous sequence - C.trachomatis:76 T.vaginalis:76

O84779              	100.00%		A2EYF0              	100.00%
                    	       		A2EGK6              	72.45%
                    	       		A2G1B9              	32.48%
                    	       		A2DU95              	30.61%
Bootstrap support for O84779 as seed ortholog is 100%.
Bootstrap support for A2EYF0 as seed ortholog is 100%.

Group of orthologs #105. Best score 75 bits
Score difference with first non-orthologous sequence - C.trachomatis:75 T.vaginalis:75

O84350              	100.00%		A2EZ45              	100.00%
                    	       		A2EX68              	26.36%
                    	       		A2DA23              	16.64%
                    	       		A2FAK6              	12.12%
                    	       		A2FFB6              	11.05%
Bootstrap support for O84350 as seed ortholog is 100%.
Bootstrap support for A2EZ45 as seed ortholog is 100%.

Group of orthologs #106. Best score 74 bits
Score difference with first non-orthologous sequence - C.trachomatis:74 T.vaginalis:74

O84548              	100.00%		A2G7M2              	100.00%
                    	       		A2EJB6              	50.34%
                    	       		A2G102              	48.85%
                    	       		A2DL06              	40.02%
                    	       		A2EUU7              	38.53%
                    	       		A2FJI8              	34.75%
                    	       		A2E136              	34.17%
                    	       		A2DES9              	31.54%
                    	       		A2GJH7              	29.93%
                    	       		A2EXH0              	25.23%
                    	       		A2EY29              	17.55%
                    	       		A2EDP3              	15.71%
                    	       		A2FKS6              	14.91%
                    	       		A2EBA7              	12.61%
Bootstrap support for O84548 as seed ortholog is 100%.
Bootstrap support for A2G7M2 as seed ortholog is 100%.

Group of orthologs #107. Best score 74 bits
Score difference with first non-orthologous sequence - C.trachomatis:74 T.vaginalis:74

O84338              	100.00%		A2G2Q5              	100.00%
                    	       		A2E6V9              	24.01%
                    	       		A2E057              	23.12%
                    	       		A2DS36              	20.43%
                    	       		A2E870              	6.27%
Bootstrap support for O84338 as seed ortholog is 100%.
Bootstrap support for A2G2Q5 as seed ortholog is 100%.

Group of orthologs #108. Best score 74 bits
Score difference with first non-orthologous sequence - C.trachomatis:74 T.vaginalis:74

O84611              	100.00%		A2F859              	100.00%
Bootstrap support for O84611 as seed ortholog is 100%.
Bootstrap support for A2F859 as seed ortholog is 100%.

Group of orthologs #109. Best score 72 bits
Score difference with first non-orthologous sequence - C.trachomatis:72 T.vaginalis:72

O84719              	100.00%		A2FJL6              	100.00%
                    	       		A2EDY9              	42.11%
                    	       		A2FNF0              	42.11%
                    	       		A2GWL8              	41.49%
                    	       		A2F2N5              	37.15%
                    	       		A2GPA6              	21.52%
                    	       		A2H6D2              	19.97%
Bootstrap support for O84719 as seed ortholog is 100%.
Bootstrap support for A2FJL6 as seed ortholog is 100%.

Group of orthologs #110. Best score 68 bits
Score difference with first non-orthologous sequence - C.trachomatis:68 T.vaginalis:68

P0A4C8              	100.00%		A2FAK9              	100.00%
                    	       		A2EHK3              	92.50%
                    	       		A2FV16              	91.88%
                    	       		A2E8B4              	91.46%
                    	       		A2DDJ7              	91.25%
Bootstrap support for P0A4C8 as seed ortholog is 100%.
Bootstrap support for A2FAK9 as seed ortholog is 100%.

Group of orthologs #111. Best score 67 bits
Score difference with first non-orthologous sequence - C.trachomatis:67 T.vaginalis:67

O84499              	100.00%		A2DM87              	100.00%
Bootstrap support for O84499 as seed ortholog is 100%.
Bootstrap support for A2DM87 as seed ortholog is 100%.

Group of orthologs #112. Best score 67 bits
Score difference with first non-orthologous sequence - C.trachomatis:67 T.vaginalis:67

O84579              	100.00%		A2G2B4              	100.00%
Bootstrap support for O84579 as seed ortholog is 100%.
Bootstrap support for A2G2B4 as seed ortholog is 100%.

Group of orthologs #113. Best score 66 bits
Score difference with first non-orthologous sequence - C.trachomatis:66 T.vaginalis:11

O84469              	100.00%		A2EY58              	100.00%
Bootstrap support for O84469 as seed ortholog is 100%.
Bootstrap support for A2EY58 as seed ortholog is 62%.
Alternative seed ortholog is A2E6F9 (11 bits away from this cluster)

Group of orthologs #114. Best score 65 bits
Score difference with first non-orthologous sequence - C.trachomatis:65 T.vaginalis:65

O84284              	100.00%		A2ENN2              	100.00%
                    	       		A2G8D9              	7.37%
Bootstrap support for O84284 as seed ortholog is 100%.
Bootstrap support for A2ENN2 as seed ortholog is 100%.

Group of orthologs #115. Best score 64 bits
Score difference with first non-orthologous sequence - C.trachomatis:64 T.vaginalis:64

P0CD81              	100.00%		A2DP51              	100.00%
Bootstrap support for P0CD81 as seed ortholog is 100%.
Bootstrap support for A2DP51 as seed ortholog is 100%.

Group of orthologs #116. Best score 64 bits
Score difference with first non-orthologous sequence - C.trachomatis:64 T.vaginalis:64

O84032              	100.00%		A2DUE3              	100.00%
Bootstrap support for O84032 as seed ortholog is 100%.
Bootstrap support for A2DUE3 as seed ortholog is 100%.

Group of orthologs #117. Best score 63 bits
Score difference with first non-orthologous sequence - C.trachomatis:63 T.vaginalis:63

P0CE03              	100.00%		A2E264              	100.00%
                    	       		A2EJP5              	100.00%
                    	       		A2EVR5              	100.00%
                    	       		A2FWM0              	100.00%
                    	       		Q76KS8              	100.00%
Bootstrap support for P0CE03 as seed ortholog is 100%.
Bootstrap support for A2E264 as seed ortholog is 100%.
Bootstrap support for A2EJP5 as seed ortholog is 100%.
Bootstrap support for A2EVR5 as seed ortholog is 100%.
Bootstrap support for A2FWM0 as seed ortholog is 100%.
Bootstrap support for Q76KS8 as seed ortholog is 100%.

Group of orthologs #118. Best score 62 bits
Score difference with first non-orthologous sequence - C.trachomatis:62 T.vaginalis:62

O84687              	100.00%		A2DNB0              	100.00%
                    	       		A2EFE7              	100.00%
                    	       		A2FCK1              	100.00%
                    	       		A2FLG0              	100.00%
Bootstrap support for O84687 as seed ortholog is 100%.
Bootstrap support for A2DNB0 as seed ortholog is 100%.
Bootstrap support for A2EFE7 as seed ortholog is 100%.
Bootstrap support for A2FCK1 as seed ortholog is 100%.
Bootstrap support for A2FLG0 as seed ortholog is 100%.

Group of orthologs #119. Best score 62 bits
Score difference with first non-orthologous sequence - C.trachomatis:62 T.vaginalis:62

O84128              	100.00%		A2DIE4              	100.00%
                    	       		A2D919              	99.08%
Bootstrap support for O84128 as seed ortholog is 100%.
Bootstrap support for A2DIE4 as seed ortholog is 100%.

Group of orthologs #120. Best score 62 bits
Score difference with first non-orthologous sequence - C.trachomatis:62 T.vaginalis:62

O84703              	100.00%		A2DS55              	100.00%
                    	       		A2DNH5              	66.35%
Bootstrap support for O84703 as seed ortholog is 100%.
Bootstrap support for A2DS55 as seed ortholog is 100%.

Group of orthologs #121. Best score 60 bits
Score difference with first non-orthologous sequence - C.trachomatis:60 T.vaginalis:60

O84218              	100.00%		A2EL73              	100.00%
                    	       		A2F3S7              	62.06%
                    	       		A2FLG6              	59.42%
                    	       		A2DHF5              	51.58%
Bootstrap support for O84218 as seed ortholog is 100%.
Bootstrap support for A2EL73 as seed ortholog is 100%.

Group of orthologs #122. Best score 59 bits
Score difference with first non-orthologous sequence - C.trachomatis:59 T.vaginalis:59

O84825              	100.00%		A2D794              	100.00%
O84824              	100.00%		A2FZQ2              	100.00%
                    	       		A2E0Y4              	100.00%
                    	       		A2EQD1              	42.40%
                    	       		A2FBT6              	42.16%
                    	       		A2D8L6              	35.18%
                    	       		A2FN59              	35.10%
                    	       		A2EQ35              	34.05%
                    	       		A2DL88              	32.66%
                    	       		A2ENA8              	32.04%
                    	       		A2F7A5              	30.65%
                    	       		A2DVJ1              	30.40%
                    	       		A2ET77              	28.27%
                    	       		A2DGC3              	28.14%
                    	       		A2E9G4              	27.89%
                    	       		A2DV68              	27.76%
                    	       		A2DX44              	27.76%
                    	       		A2EJ34              	26.51%
                    	       		A2DH42              	26.27%
                    	       		A2DR17              	25.48%
                    	       		A2FV35              	24.87%
                    	       		A2DWG0              	21.73%
                    	       		A2DHJ2              	21.20%
                    	       		A2E4I1              	20.63%
                    	       		A2EEY9              	20.52%
                    	       		A2FB61              	16.57%
                    	       		A2DBZ5              	15.83%
                    	       		A2EIK4              	11.68%
                    	       		A2DW03              	8.68%
                    	       		A2DI84              	7.33%
Bootstrap support for O84825 as seed ortholog is 100%.
Bootstrap support for O84824 as seed ortholog is 100%.
Bootstrap support for A2D794 as seed ortholog is 100%.
Bootstrap support for A2FZQ2 as seed ortholog is 100%.
Bootstrap support for A2E0Y4 as seed ortholog is 100%.

Group of orthologs #123. Best score 59 bits
Score difference with first non-orthologous sequence - C.trachomatis:59 T.vaginalis:59

P64386              	100.00%		A2FJA7              	100.00%
Bootstrap support for P64386 as seed ortholog is 100%.
Bootstrap support for A2FJA7 as seed ortholog is 100%.

Group of orthologs #124. Best score 59 bits
Score difference with first non-orthologous sequence - C.trachomatis:59 T.vaginalis:59

O84507              	100.00%		A2FWB1              	100.00%
Bootstrap support for O84507 as seed ortholog is 100%.
Bootstrap support for A2FWB1 as seed ortholog is 100%.

Group of orthologs #125. Best score 57 bits
Score difference with first non-orthologous sequence - C.trachomatis:57 T.vaginalis:57

O84527              	100.00%		A2DIM3              	100.00%
Bootstrap support for O84527 as seed ortholog is 100%.
Bootstrap support for A2DIM3 as seed ortholog is 100%.

Group of orthologs #126. Best score 56 bits
Score difference with first non-orthologous sequence - C.trachomatis:56 T.vaginalis:56

O84364              	100.00%		A2FJB3              	100.00%
Bootstrap support for O84364 as seed ortholog is 100%.
Bootstrap support for A2FJB3 as seed ortholog is 100%.

Group of orthologs #127. Best score 55 bits
Score difference with first non-orthologous sequence - C.trachomatis:55 T.vaginalis:55

O84496              	100.00%		A2EDD6              	100.00%
                    	       		A2DIH3              	60.64%
                    	       		A2G1C4              	30.47%
Bootstrap support for O84496 as seed ortholog is 100%.
Bootstrap support for A2EDD6 as seed ortholog is 100%.

Group of orthologs #128. Best score 54 bits
Score difference with first non-orthologous sequence - C.trachomatis:54 T.vaginalis:54

P0CE04              	100.00%		A2DTR8              	100.00%
                    	       		A2E0E1              	100.00%
Bootstrap support for P0CE04 as seed ortholog is 100%.
Bootstrap support for A2DTR8 as seed ortholog is 100%.
Bootstrap support for A2E0E1 as seed ortholog is 100%.

Group of orthologs #129. Best score 53 bits
Score difference with first non-orthologous sequence - C.trachomatis:53 T.vaginalis:53

O84366              	100.00%		A2E8E5              	100.00%
Bootstrap support for O84366 as seed ortholog is 100%.
Bootstrap support for A2E8E5 as seed ortholog is 100%.

Group of orthologs #130. Best score 51 bits
Score difference with first non-orthologous sequence - C.trachomatis:51 T.vaginalis:10

O84589              	100.00%		A2FUT1              	100.00%
                    	       		A2FN45              	14.02%
Bootstrap support for O84589 as seed ortholog is 100%.
Bootstrap support for A2FUT1 as seed ortholog is 59%.
Alternative seed ortholog is A2FA72 (10 bits away from this cluster)

Group of orthologs #131. Best score 48 bits
Score difference with first non-orthologous sequence - C.trachomatis:48 T.vaginalis:48

O84127              	100.00%		A2D7V7              	100.00%
                    	       		A2DGT9              	100.00%
                    	       		A2DS53              	100.00%
                    	       		A2EA49              	100.00%
                    	       		A2FVM3              	100.00%
                    	       		A2DZ26              	90.00%
                    	       		A2DSP8              	86.57%
Bootstrap support for O84127 as seed ortholog is 100%.
Bootstrap support for A2D7V7 as seed ortholog is 100%.
Bootstrap support for A2DGT9 as seed ortholog is 100%.
Bootstrap support for A2DS53 as seed ortholog is 100%.
Bootstrap support for A2EA49 as seed ortholog is 100%.
Bootstrap support for A2FVM3 as seed ortholog is 100%.

Group of orthologs #132. Best score 47 bits
Score difference with first non-orthologous sequence - C.trachomatis:47 T.vaginalis:47

O84395              	100.00%		A2EIU6              	100.00%
                    	       		A2EI95              	91.36%
Bootstrap support for O84395 as seed ortholog is 100%.
Bootstrap support for A2EIU6 as seed ortholog is 100%.

Group of orthologs #133. Best score 47 bits
Score difference with first non-orthologous sequence - C.trachomatis:47 T.vaginalis:47

O84762              	100.00%		A2EGJ9              	100.00%
Bootstrap support for O84762 as seed ortholog is 100%.
Bootstrap support for A2EGJ9 as seed ortholog is 100%.

Group of orthologs #134. Best score 45 bits
Score difference with first non-orthologous sequence - C.trachomatis:45 T.vaginalis:45

O84470              	100.00%		A2DZV6              	100.00%
                    	       		A2EZW3              	100.00%
                    	       		A2E222              	33.17%
                    	       		A2E383              	30.64%
                    	       		A2EUY2              	24.44%
                    	       		A2DGS2              	9.31%
                    	       		A2ESH7              	7.84%
                    	       		A2E3S6              	7.60%
                    	       		A2F4H7              	7.60%
                    	       		A2G9K2              	7.48%
                    	       		A2FDX7              	7.35%
                    	       		A2EDM2              	6.62%
                    	       		A2EBK2              	6.62%
                    	       		A2FHQ8              	6.48%
                    	       		A2E6J3              	6.37%
                    	       		A2FEM3              	6.13%
                    	       		A2EXA3              	5.39%
                    	       		A2EFS8              	5.15%
Bootstrap support for O84470 as seed ortholog is 100%.
Bootstrap support for A2DZV6 as seed ortholog is 100%.
Bootstrap support for A2EZW3 as seed ortholog is 100%.

Group of orthologs #135. Best score 45 bits
Score difference with first non-orthologous sequence - C.trachomatis:45 T.vaginalis:45

O84062              	100.00%		A2G6S2              	100.00%
Bootstrap support for O84062 as seed ortholog is 100%.
Bootstrap support for A2G6S2 as seed ortholog is 100%.

Group of orthologs #136. Best score 44 bits
Score difference with first non-orthologous sequence - C.trachomatis:44 T.vaginalis:44

P0CD80              	100.00%		A2FY08              	100.00%
                    	       		A2FXT7              	50.83%
Bootstrap support for P0CD80 as seed ortholog is 100%.
Bootstrap support for A2FY08 as seed ortholog is 100%.

Group of orthologs #137. Best score 43 bits
Score difference with first non-orthologous sequence - C.trachomatis:43 T.vaginalis:43

O84151              	100.00%		A2G2E3              	100.00%
O84209              	6.63%		A2FNJ7              	63.55%
                    	       		A2F745              	47.29%
                    	       		A2FVQ7              	29.53%
                    	       		A2F740              	28.79%
                    	       		A2DUF4              	27.10%
                    	       		A2FUR1              	25.98%
                    	       		A2EVB2              	25.79%
                    	       		A2EWT8              	24.86%
                    	       		A2ES03              	22.43%
                    	       		A2F0D2              	21.87%
                    	       		A2DY49              	21.50%
                    	       		A2EX45              	19.81%
                    	       		A2DBL3              	13.83%
                    	       		A2EVM2              	12.34%
Bootstrap support for O84151 as seed ortholog is 100%.
Bootstrap support for A2G2E3 as seed ortholog is 100%.

Group of orthologs #138. Best score 43 bits
Score difference with first non-orthologous sequence - C.trachomatis:43 T.vaginalis:43

O84756              	100.00%		A2EU62              	100.00%
                    	       		A2E7Y6              	73.95%
Bootstrap support for O84756 as seed ortholog is 100%.
Bootstrap support for A2EU62 as seed ortholog is 100%.