###################################
2691 groups of orthologs
4233 in-paralogs from L.chalumnae
3212 in-paralogs from P.pallidum
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
###################################

Group of orthologs #1. Best score 4707 bits
Score difference with first non-orthologous sequence - L.chalumnae:3222 P.pallidum:4707

H3B1H3              	100.00%		D3BP40              	100.00%
Bootstrap support for H3B1H3 as seed ortholog is 100%.
Bootstrap support for D3BP40 as seed ortholog is 100%.

Group of orthologs #2. Best score 3352 bits
Score difference with first non-orthologous sequence - L.chalumnae:3352 P.pallidum:3352

H3AQI5              	100.00%		D3BFM8              	100.00%
Bootstrap support for H3AQI5 as seed ortholog is 100%.
Bootstrap support for D3BFM8 as seed ortholog is 100%.

Group of orthologs #3. Best score 2353 bits
Score difference with first non-orthologous sequence - L.chalumnae:942 P.pallidum:2353

H3AU29              	100.00%		D3BB35              	100.00%
Bootstrap support for H3AU29 as seed ortholog is 100%.
Bootstrap support for D3BB35 as seed ortholog is 100%.

Group of orthologs #4. Best score 2070 bits
Score difference with first non-orthologous sequence - L.chalumnae:2070 P.pallidum:608

H2ZS81              	100.00%		D3BVM0              	100.00%
Bootstrap support for H2ZS81 as seed ortholog is 100%.
Bootstrap support for D3BVM0 as seed ortholog is 100%.

Group of orthologs #5. Best score 1828 bits
Score difference with first non-orthologous sequence - L.chalumnae:1828 P.pallidum:1828

H3AN14              	100.00%		D3BNB1              	100.00%
H3AKV2              	51.76%		
Bootstrap support for H3AN14 as seed ortholog is 100%.
Bootstrap support for D3BNB1 as seed ortholog is 100%.

Group of orthologs #6. Best score 1792 bits
Score difference with first non-orthologous sequence - L.chalumnae:1792 P.pallidum:1240

H3AVP5              	100.00%		D3BJK4              	100.00%
Bootstrap support for H3AVP5 as seed ortholog is 100%.
Bootstrap support for D3BJK4 as seed ortholog is 100%.

Group of orthologs #7. Best score 1708 bits
Score difference with first non-orthologous sequence - L.chalumnae:1708 P.pallidum:1708

H3BCH2              	100.00%		D3BMV7              	100.00%
Bootstrap support for H3BCH2 as seed ortholog is 100%.
Bootstrap support for D3BMV7 as seed ortholog is 100%.

Group of orthologs #8. Best score 1697 bits
Score difference with first non-orthologous sequence - L.chalumnae:1697 P.pallidum:1697

H3AU80              	100.00%		D3BI99              	100.00%
H3BFJ1              	39.53%		
Bootstrap support for H3AU80 as seed ortholog is 100%.
Bootstrap support for D3BI99 as seed ortholog is 100%.

Group of orthologs #9. Best score 1447 bits
Score difference with first non-orthologous sequence - L.chalumnae:1447 P.pallidum:1447

H3BBW8              	100.00%		D3B936              	100.00%
Bootstrap support for H3BBW8 as seed ortholog is 100%.
Bootstrap support for D3B936 as seed ortholog is 100%.

Group of orthologs #10. Best score 1434 bits
Score difference with first non-orthologous sequence - L.chalumnae:1434 P.pallidum:1434

H3B9U9              	100.00%		D3BM55              	100.00%
Bootstrap support for H3B9U9 as seed ortholog is 100%.
Bootstrap support for D3BM55 as seed ortholog is 100%.

Group of orthologs #11. Best score 1422 bits
Score difference with first non-orthologous sequence - L.chalumnae:1155 P.pallidum:866

H3BGV0              	100.00%		D3BKC8              	100.00%
Bootstrap support for H3BGV0 as seed ortholog is 100%.
Bootstrap support for D3BKC8 as seed ortholog is 100%.

Group of orthologs #12. Best score 1387 bits
Score difference with first non-orthologous sequence - L.chalumnae:805 P.pallidum:551

H2ZX54              	100.00%		D3AVT3              	100.00%
Bootstrap support for H2ZX54 as seed ortholog is 100%.
Bootstrap support for D3AVT3 as seed ortholog is 100%.

Group of orthologs #13. Best score 1372 bits
Score difference with first non-orthologous sequence - L.chalumnae:1372 P.pallidum:1372

H3A0Y3              	100.00%		D3BHD6              	100.00%
Bootstrap support for H3A0Y3 as seed ortholog is 100%.
Bootstrap support for D3BHD6 as seed ortholog is 100%.

Group of orthologs #14. Best score 1358 bits
Score difference with first non-orthologous sequence - L.chalumnae:1358 P.pallidum:1358

H2ZUU5              	100.00%		D3BLR5              	100.00%
Bootstrap support for H2ZUU5 as seed ortholog is 100%.
Bootstrap support for D3BLR5 as seed ortholog is 100%.

Group of orthologs #15. Best score 1341 bits
Score difference with first non-orthologous sequence - L.chalumnae:1341 P.pallidum:1341

H3B272              	100.00%		D3BG64              	100.00%
Bootstrap support for H3B272 as seed ortholog is 100%.
Bootstrap support for D3BG64 as seed ortholog is 100%.

Group of orthologs #16. Best score 1292 bits
Score difference with first non-orthologous sequence - L.chalumnae:1292 P.pallidum:1292

H3AQ24              	100.00%		D3AYJ5              	100.00%
Bootstrap support for H3AQ24 as seed ortholog is 100%.
Bootstrap support for D3AYJ5 as seed ortholog is 100%.

Group of orthologs #17. Best score 1282 bits
Score difference with first non-orthologous sequence - L.chalumnae:1282 P.pallidum:1282

H3BIS8              	100.00%		D3B758              	100.00%
Bootstrap support for H3BIS8 as seed ortholog is 100%.
Bootstrap support for D3B758 as seed ortholog is 100%.

Group of orthologs #18. Best score 1234 bits
Score difference with first non-orthologous sequence - L.chalumnae:1234 P.pallidum:1050

H3BI03              	100.00%		D3BUX1              	100.00%
Bootstrap support for H3BI03 as seed ortholog is 100%.
Bootstrap support for D3BUX1 as seed ortholog is 100%.

Group of orthologs #19. Best score 1172 bits
Score difference with first non-orthologous sequence - L.chalumnae:1172 P.pallidum:1172

H3AK74              	100.00%		D3B3V5              	100.00%
Bootstrap support for H3AK74 as seed ortholog is 100%.
Bootstrap support for D3B3V5 as seed ortholog is 100%.

Group of orthologs #20. Best score 1170 bits
Score difference with first non-orthologous sequence - L.chalumnae:1170 P.pallidum:1170

H3B4L8              	100.00%		D3BBT9              	100.00%
Bootstrap support for H3B4L8 as seed ortholog is 100%.
Bootstrap support for D3BBT9 as seed ortholog is 100%.

Group of orthologs #21. Best score 1124 bits
Score difference with first non-orthologous sequence - L.chalumnae:1124 P.pallidum:304

H3A6N0              	100.00%		D3BU68              	100.00%
H3ASK6              	78.70%		
Bootstrap support for H3A6N0 as seed ortholog is 100%.
Bootstrap support for D3BU68 as seed ortholog is 100%.

Group of orthologs #22. Best score 1115 bits
Score difference with first non-orthologous sequence - L.chalumnae:1115 P.pallidum:1115

M3XKA5              	100.00%		D3B7S0              	100.00%
Bootstrap support for M3XKA5 as seed ortholog is 100%.
Bootstrap support for D3B7S0 as seed ortholog is 100%.

Group of orthologs #23. Best score 1108 bits
Score difference with first non-orthologous sequence - L.chalumnae:1108 P.pallidum:1108

H3ARS4              	100.00%		D3BH29              	100.00%
Bootstrap support for H3ARS4 as seed ortholog is 100%.
Bootstrap support for D3BH29 as seed ortholog is 100%.

Group of orthologs #24. Best score 1106 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 P.pallidum:657

H3AWB6              	100.00%		D3BIX9              	100.00%
Bootstrap support for H3AWB6 as seed ortholog is 99%.
Bootstrap support for D3BIX9 as seed ortholog is 100%.

Group of orthologs #25. Best score 1097 bits
Score difference with first non-orthologous sequence - L.chalumnae:669 P.pallidum:687

H3AYJ2              	100.00%		D3B2A8              	100.00%
H3A6R4              	8.78%		
Bootstrap support for H3AYJ2 as seed ortholog is 100%.
Bootstrap support for D3B2A8 as seed ortholog is 100%.

Group of orthologs #26. Best score 1076 bits
Score difference with first non-orthologous sequence - L.chalumnae:1076 P.pallidum:580

H3AYF8              	100.00%		D3BFQ2              	100.00%
Bootstrap support for H3AYF8 as seed ortholog is 100%.
Bootstrap support for D3BFQ2 as seed ortholog is 100%.

Group of orthologs #27. Best score 1074 bits
Score difference with first non-orthologous sequence - L.chalumnae:1074 P.pallidum:1074

H3AKC9              	100.00%		D3AWX9              	100.00%
Bootstrap support for H3AKC9 as seed ortholog is 100%.
Bootstrap support for D3AWX9 as seed ortholog is 100%.

Group of orthologs #28. Best score 1074 bits
Score difference with first non-orthologous sequence - L.chalumnae:1074 P.pallidum:571

H3AYQ6              	100.00%		D3BB51              	100.00%
Bootstrap support for H3AYQ6 as seed ortholog is 100%.
Bootstrap support for D3BB51 as seed ortholog is 100%.

Group of orthologs #29. Best score 1061 bits
Score difference with first non-orthologous sequence - L.chalumnae:440 P.pallidum:576

H3AW23              	100.00%		D3B0C6              	100.00%
H3AY11              	88.09%		
H3A7R4              	72.23%		
H3BFG5              	51.36%		
H3A495              	42.37%		
H3AWW6              	21.69%		
H3ALJ7              	11.68%		
H3A9S4              	10.94%		
H3AHC8              	9.82%		
H3AVX9              	5.23%		
Bootstrap support for H3AW23 as seed ortholog is 100%.
Bootstrap support for D3B0C6 as seed ortholog is 100%.

Group of orthologs #30. Best score 1058 bits
Score difference with first non-orthologous sequence - L.chalumnae:1058 P.pallidum:1058

H3ALQ7              	100.00%		D3B015              	100.00%
Bootstrap support for H3ALQ7 as seed ortholog is 100%.
Bootstrap support for D3B015 as seed ortholog is 100%.

Group of orthologs #31. Best score 1051 bits
Score difference with first non-orthologous sequence - L.chalumnae:356 P.pallidum:394

H2ZXQ2              	100.00%		D3BPX4              	100.00%
H3ARY3              	18.11%		
Bootstrap support for H2ZXQ2 as seed ortholog is 100%.
Bootstrap support for D3BPX4 as seed ortholog is 100%.

Group of orthologs #32. Best score 1048 bits
Score difference with first non-orthologous sequence - L.chalumnae:1048 P.pallidum:1048

H3AKV9              	100.00%		D3BD99              	100.00%
Bootstrap support for H3AKV9 as seed ortholog is 100%.
Bootstrap support for D3BD99 as seed ortholog is 100%.

Group of orthologs #33. Best score 1034 bits
Score difference with first non-orthologous sequence - L.chalumnae:1034 P.pallidum:132

H3A5L4              	100.00%		D3B7U7              	100.00%
H3ALH9              	43.99%		
Bootstrap support for H3A5L4 as seed ortholog is 100%.
Bootstrap support for D3B7U7 as seed ortholog is 93%.

Group of orthologs #34. Best score 1026 bits
Score difference with first non-orthologous sequence - L.chalumnae:1026 P.pallidum:1026

H3B486              	100.00%		D3B599              	100.00%
Bootstrap support for H3B486 as seed ortholog is 100%.
Bootstrap support for D3B599 as seed ortholog is 100%.

Group of orthologs #35. Best score 1009 bits
Score difference with first non-orthologous sequence - L.chalumnae:1009 P.pallidum:1009

H3BGE5              	100.00%		D3B7Q6              	100.00%
Bootstrap support for H3BGE5 as seed ortholog is 100%.
Bootstrap support for D3B7Q6 as seed ortholog is 100%.

Group of orthologs #36. Best score 1008 bits
Score difference with first non-orthologous sequence - L.chalumnae:1008 P.pallidum:1008

H3AIW6              	100.00%		D3BTI9              	100.00%
Bootstrap support for H3AIW6 as seed ortholog is 100%.
Bootstrap support for D3BTI9 as seed ortholog is 100%.

Group of orthologs #37. Best score 1002 bits
Score difference with first non-orthologous sequence - L.chalumnae:1002 P.pallidum:1002

H3BBR0              	100.00%		D3B986              	100.00%
                    	       		D3AW84              	8.95%
Bootstrap support for H3BBR0 as seed ortholog is 100%.
Bootstrap support for D3B986 as seed ortholog is 100%.

Group of orthologs #38. Best score 995 bits
Score difference with first non-orthologous sequence - L.chalumnae:186 P.pallidum:638

H2ZV91              	100.00%		D3B545              	100.00%
H3AB35              	66.79%		D3AVQ2              	36.15%
H2ZV15              	40.07%		
H3AWU4              	36.46%		
H3B4D4              	28.52%		
Bootstrap support for H2ZV91 as seed ortholog is 99%.
Bootstrap support for D3B545 as seed ortholog is 100%.

Group of orthologs #39. Best score 993 bits
Score difference with first non-orthologous sequence - L.chalumnae:993 P.pallidum:993

H3AI30              	100.00%		D3BIF3              	100.00%
Bootstrap support for H3AI30 as seed ortholog is 100%.
Bootstrap support for D3BIF3 as seed ortholog is 100%.

Group of orthologs #40. Best score 978 bits
Score difference with first non-orthologous sequence - L.chalumnae:978 P.pallidum:978

H3AL63              	100.00%		D3BT33              	100.00%
Bootstrap support for H3AL63 as seed ortholog is 100%.
Bootstrap support for D3BT33 as seed ortholog is 100%.

Group of orthologs #41. Best score 950 bits
Score difference with first non-orthologous sequence - L.chalumnae:950 P.pallidum:950

H3A831              	100.00%		D3BKT1              	100.00%
H3AD52              	18.99%		
Bootstrap support for H3A831 as seed ortholog is 100%.
Bootstrap support for D3BKT1 as seed ortholog is 100%.

Group of orthologs #42. Best score 950 bits
Score difference with first non-orthologous sequence - L.chalumnae:167 P.pallidum:201

M3XIT3              	100.00%		D3B5K6              	100.00%
H2ZW74              	12.76%		
Bootstrap support for M3XIT3 as seed ortholog is 97%.
Bootstrap support for D3B5K6 as seed ortholog is 99%.

Group of orthologs #43. Best score 948 bits
Score difference with first non-orthologous sequence - L.chalumnae:948 P.pallidum:948

H3A6E7              	100.00%		D3B5A9              	100.00%
Bootstrap support for H3A6E7 as seed ortholog is 100%.
Bootstrap support for D3B5A9 as seed ortholog is 100%.

Group of orthologs #44. Best score 947 bits
Score difference with first non-orthologous sequence - L.chalumnae:947 P.pallidum:947

H3AQ38              	100.00%		D3BEQ3              	100.00%
H2ZTU7              	51.38%		
H3B357              	43.08%		
Bootstrap support for H3AQ38 as seed ortholog is 100%.
Bootstrap support for D3BEQ3 as seed ortholog is 100%.

Group of orthologs #45. Best score 943 bits
Score difference with first non-orthologous sequence - L.chalumnae:687 P.pallidum:746

H2ZY13              	100.00%		D3BQN9              	100.00%
H3AJ76              	20.59%		D3B2N2              	61.45%
                    	       		D3BQP1              	40.36%
                    	       		D3B9D6              	19.04%
Bootstrap support for H2ZY13 as seed ortholog is 100%.
Bootstrap support for D3BQN9 as seed ortholog is 100%.

Group of orthologs #46. Best score 935 bits
Score difference with first non-orthologous sequence - L.chalumnae:935 P.pallidum:301

H3B5X3              	100.00%		D3BPX3              	100.00%
Bootstrap support for H3B5X3 as seed ortholog is 100%.
Bootstrap support for D3BPX3 as seed ortholog is 99%.

Group of orthologs #47. Best score 932 bits
Score difference with first non-orthologous sequence - L.chalumnae:932 P.pallidum:932

H3AM97              	100.00%		D3B127              	100.00%
Bootstrap support for H3AM97 as seed ortholog is 100%.
Bootstrap support for D3B127 as seed ortholog is 100%.

Group of orthologs #48. Best score 929 bits
Score difference with first non-orthologous sequence - L.chalumnae:929 P.pallidum:929

H2ZX41              	100.00%		D3BFE8              	100.00%
Bootstrap support for H2ZX41 as seed ortholog is 100%.
Bootstrap support for D3BFE8 as seed ortholog is 100%.

Group of orthologs #49. Best score 920 bits
Score difference with first non-orthologous sequence - L.chalumnae:472 P.pallidum:751

H3AEE1              	100.00%		D3B1P3              	100.00%
H3BAQ9              	75.77%		
Bootstrap support for H3AEE1 as seed ortholog is 100%.
Bootstrap support for D3B1P3 as seed ortholog is 100%.

Group of orthologs #50. Best score 919 bits
Score difference with first non-orthologous sequence - L.chalumnae:919 P.pallidum:919

H3B8U3              	100.00%		D3BLH3              	100.00%
Bootstrap support for H3B8U3 as seed ortholog is 100%.
Bootstrap support for D3BLH3 as seed ortholog is 100%.

Group of orthologs #51. Best score 918 bits
Score difference with first non-orthologous sequence - L.chalumnae:812 P.pallidum:696

H3AP88              	100.00%		D3BDE5              	100.00%
Bootstrap support for H3AP88 as seed ortholog is 100%.
Bootstrap support for D3BDE5 as seed ortholog is 100%.

Group of orthologs #52. Best score 914 bits
Score difference with first non-orthologous sequence - L.chalumnae:914 P.pallidum:914

H3ADM6              	100.00%		D3BM96              	100.00%
Bootstrap support for H3ADM6 as seed ortholog is 100%.
Bootstrap support for D3BM96 as seed ortholog is 100%.

Group of orthologs #53. Best score 904 bits
Score difference with first non-orthologous sequence - L.chalumnae:179 P.pallidum:383

H3A2A7              	100.00%		D3BST1              	100.00%
H3B7C0              	44.72%		
Bootstrap support for H3A2A7 as seed ortholog is 96%.
Bootstrap support for D3BST1 as seed ortholog is 99%.

Group of orthologs #54. Best score 903 bits
Score difference with first non-orthologous sequence - L.chalumnae:801 P.pallidum:785

H3B8B4              	100.00%		D3BEG0              	100.00%
Bootstrap support for H3B8B4 as seed ortholog is 100%.
Bootstrap support for D3BEG0 as seed ortholog is 100%.

Group of orthologs #55. Best score 899 bits
Score difference with first non-orthologous sequence - L.chalumnae:262 P.pallidum:107

H3AAN7              	100.00%		D3BK04              	100.00%
H3AP83              	38.83%		
H2ZSM1              	12.47%		
Bootstrap support for H3AAN7 as seed ortholog is 99%.
Bootstrap support for D3BK04 as seed ortholog is 90%.

Group of orthologs #56. Best score 898 bits
Score difference with first non-orthologous sequence - L.chalumnae:856 P.pallidum:898

H3A2A4              	100.00%		D3B3L3              	100.00%
Bootstrap support for H3A2A4 as seed ortholog is 100%.
Bootstrap support for D3B3L3 as seed ortholog is 100%.

Group of orthologs #57. Best score 892 bits
Score difference with first non-orthologous sequence - L.chalumnae:370 P.pallidum:377

H3BGD8              	100.00%		D3BMZ2              	100.00%
Bootstrap support for H3BGD8 as seed ortholog is 100%.
Bootstrap support for D3BMZ2 as seed ortholog is 100%.

Group of orthologs #58. Best score 885 bits
Score difference with first non-orthologous sequence - L.chalumnae:885 P.pallidum:885

H3ADM5              	100.00%		D3BSF9              	100.00%
Bootstrap support for H3ADM5 as seed ortholog is 100%.
Bootstrap support for D3BSF9 as seed ortholog is 100%.

Group of orthologs #59. Best score 874 bits
Score difference with first non-orthologous sequence - L.chalumnae:215 P.pallidum:874

H3BFV4              	100.00%		D3BE43              	100.00%
Bootstrap support for H3BFV4 as seed ortholog is 100%.
Bootstrap support for D3BE43 as seed ortholog is 100%.

Group of orthologs #60. Best score 864 bits
Score difference with first non-orthologous sequence - L.chalumnae:302 P.pallidum:864

H3ATD8              	100.00%		D3BJ98              	100.00%
H2ZZD1              	31.51%		
H3A9E4              	29.38%		
H3ART7              	26.53%		
Bootstrap support for H3ATD8 as seed ortholog is 100%.
Bootstrap support for D3BJ98 as seed ortholog is 100%.

Group of orthologs #61. Best score 862 bits
Score difference with first non-orthologous sequence - L.chalumnae:181 P.pallidum:231

H2ZWK6              	100.00%		D3BVP5              	100.00%
H3A6P4              	100.00%		D3AX78              	100.00%
H3B556              	46.40%		
H3B1E3              	39.71%		
M3XHC6              	23.88%		
Bootstrap support for H2ZWK6 as seed ortholog is 99%.
Bootstrap support for H3A6P4 as seed ortholog is 99%.
Bootstrap support for D3BVP5 as seed ortholog is 99%.
Bootstrap support for D3AX78 as seed ortholog is 99%.

Group of orthologs #62. Best score 860 bits
Score difference with first non-orthologous sequence - L.chalumnae:801 P.pallidum:712

H3AJG5              	100.00%		D3B700              	100.00%
Bootstrap support for H3AJG5 as seed ortholog is 100%.
Bootstrap support for D3B700 as seed ortholog is 100%.

Group of orthologs #63. Best score 859 bits
Score difference with first non-orthologous sequence - L.chalumnae:859 P.pallidum:859

H3AQQ2              	100.00%		D3B6X4              	100.00%
H3BAN4              	10.77%		
Bootstrap support for H3AQQ2 as seed ortholog is 100%.
Bootstrap support for D3B6X4 as seed ortholog is 100%.

Group of orthologs #64. Best score 858 bits
Score difference with first non-orthologous sequence - L.chalumnae:485 P.pallidum:452

H2ZW56              	100.00%		D3BBA2              	100.00%
H3AXY8              	58.06%		
H2ZT16              	36.05%		
H3A0Q6              	29.90%		
Bootstrap support for H2ZW56 as seed ortholog is 100%.
Bootstrap support for D3BBA2 as seed ortholog is 100%.

Group of orthologs #65. Best score 856 bits
Score difference with first non-orthologous sequence - L.chalumnae:856 P.pallidum:856

H3AVF4              	100.00%		D3BI11              	100.00%
Bootstrap support for H3AVF4 as seed ortholog is 100%.
Bootstrap support for D3BI11 as seed ortholog is 100%.

Group of orthologs #66. Best score 855 bits
Score difference with first non-orthologous sequence - L.chalumnae:855 P.pallidum:855

H3B112              	100.00%		D3B6G3              	100.00%
H2ZSD2              	69.24%		
Bootstrap support for H3B112 as seed ortholog is 100%.
Bootstrap support for D3B6G3 as seed ortholog is 100%.

Group of orthologs #67. Best score 854 bits
Score difference with first non-orthologous sequence - L.chalumnae:854 P.pallidum:854

H3BCM2              	100.00%		D3BP16              	100.00%
H3A4H8              	6.52%		
Bootstrap support for H3BCM2 as seed ortholog is 100%.
Bootstrap support for D3BP16 as seed ortholog is 100%.

Group of orthologs #68. Best score 854 bits
Score difference with first non-orthologous sequence - L.chalumnae:854 P.pallidum:854

H3BAM6              	100.00%		D3BEN7              	100.00%
Bootstrap support for H3BAM6 as seed ortholog is 100%.
Bootstrap support for D3BEN7 as seed ortholog is 100%.

Group of orthologs #69. Best score 852 bits
Score difference with first non-orthologous sequence - L.chalumnae:852 P.pallidum:852

H3AL55              	100.00%		D3AZS3              	100.00%
Bootstrap support for H3AL55 as seed ortholog is 100%.
Bootstrap support for D3AZS3 as seed ortholog is 100%.

Group of orthologs #70. Best score 851 bits
Score difference with first non-orthologous sequence - L.chalumnae:851 P.pallidum:332

H3B2H2              	100.00%		D3BT75              	100.00%
H3AI25              	42.18%		
Bootstrap support for H3B2H2 as seed ortholog is 100%.
Bootstrap support for D3BT75 as seed ortholog is 99%.

Group of orthologs #71. Best score 851 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.pallidum:851

H3AG06              	100.00%		D3BM68              	100.00%
Bootstrap support for H3AG06 as seed ortholog is 99%.
Bootstrap support for D3BM68 as seed ortholog is 100%.

Group of orthologs #72. Best score 845 bits
Score difference with first non-orthologous sequence - L.chalumnae:686 P.pallidum:845

H3AUZ5              	100.00%		D3BTY9              	100.00%
Bootstrap support for H3AUZ5 as seed ortholog is 100%.
Bootstrap support for D3BTY9 as seed ortholog is 100%.

Group of orthologs #73. Best score 842 bits
Score difference with first non-orthologous sequence - L.chalumnae:248 P.pallidum:115

H3AEU0              	100.00%		D3BEE3              	100.00%
Bootstrap support for H3AEU0 as seed ortholog is 100%.
Bootstrap support for D3BEE3 as seed ortholog is 99%.

Group of orthologs #74. Best score 840 bits
Score difference with first non-orthologous sequence - L.chalumnae:840 P.pallidum:776

H3B017              	100.00%		D3AZB7              	100.00%
Bootstrap support for H3B017 as seed ortholog is 100%.
Bootstrap support for D3AZB7 as seed ortholog is 100%.

Group of orthologs #75. Best score 839 bits
Score difference with first non-orthologous sequence - L.chalumnae:839 P.pallidum:839

H3A0U9              	100.00%		D3BMK3              	100.00%
Bootstrap support for H3A0U9 as seed ortholog is 100%.
Bootstrap support for D3BMK3 as seed ortholog is 100%.

Group of orthologs #76. Best score 834 bits
Score difference with first non-orthologous sequence - L.chalumnae:834 P.pallidum:834

H3AXQ9              	100.00%		D3BC39              	100.00%
Bootstrap support for H3AXQ9 as seed ortholog is 100%.
Bootstrap support for D3BC39 as seed ortholog is 100%.

Group of orthologs #77. Best score 831 bits
Score difference with first non-orthologous sequence - L.chalumnae:831 P.pallidum:831

H2ZWM2              	100.00%		D3B350              	100.00%
Bootstrap support for H2ZWM2 as seed ortholog is 100%.
Bootstrap support for D3B350 as seed ortholog is 100%.

Group of orthologs #78. Best score 830 bits
Score difference with first non-orthologous sequence - L.chalumnae:830 P.pallidum:830

H3BDR2              	100.00%		D3B8I4              	100.00%
Bootstrap support for H3BDR2 as seed ortholog is 100%.
Bootstrap support for D3B8I4 as seed ortholog is 100%.

Group of orthologs #79. Best score 820 bits
Score difference with first non-orthologous sequence - L.chalumnae:517 P.pallidum:442

H3ARK4              	100.00%		D3B6I9              	100.00%
Bootstrap support for H3ARK4 as seed ortholog is 100%.
Bootstrap support for D3B6I9 as seed ortholog is 100%.

Group of orthologs #80. Best score 819 bits
Score difference with first non-orthologous sequence - L.chalumnae:474 P.pallidum:819

H3A782              	100.00%		D3B7Q7              	100.00%
Bootstrap support for H3A782 as seed ortholog is 100%.
Bootstrap support for D3B7Q7 as seed ortholog is 100%.

Group of orthologs #81. Best score 816 bits
Score difference with first non-orthologous sequence - L.chalumnae:816 P.pallidum:816

H3ANX1              	100.00%		D3BJM9              	100.00%
H3B1D1              	45.11%		D3BME3              	7.53%
Bootstrap support for H3ANX1 as seed ortholog is 100%.
Bootstrap support for D3BJM9 as seed ortholog is 100%.

Group of orthologs #82. Best score 814 bits
Score difference with first non-orthologous sequence - L.chalumnae:245 P.pallidum:218

H3BH99              	100.00%		D3BMT5              	100.00%
H3ALQ1              	46.36%		
Bootstrap support for H3BH99 as seed ortholog is 100%.
Bootstrap support for D3BMT5 as seed ortholog is 99%.

Group of orthologs #83. Best score 804 bits
Score difference with first non-orthologous sequence - L.chalumnae:804 P.pallidum:804

H3BDT5              	100.00%		D3BRB4              	100.00%
Bootstrap support for H3BDT5 as seed ortholog is 100%.
Bootstrap support for D3BRB4 as seed ortholog is 100%.

Group of orthologs #84. Best score 798 bits
Score difference with first non-orthologous sequence - L.chalumnae:798 P.pallidum:327

H3B8T1              	100.00%		D3B1G6              	100.00%
Bootstrap support for H3B8T1 as seed ortholog is 100%.
Bootstrap support for D3B1G6 as seed ortholog is 99%.

Group of orthologs #85. Best score 795 bits
Score difference with first non-orthologous sequence - L.chalumnae:795 P.pallidum:795

H3AP55              	100.00%		D3BPV1              	100.00%
Bootstrap support for H3AP55 as seed ortholog is 100%.
Bootstrap support for D3BPV1 as seed ortholog is 100%.

Group of orthologs #86. Best score 792 bits
Score difference with first non-orthologous sequence - L.chalumnae:792 P.pallidum:792

H3AHD8              	100.00%		D3B684              	100.00%
Bootstrap support for H3AHD8 as seed ortholog is 100%.
Bootstrap support for D3B684 as seed ortholog is 100%.

Group of orthologs #87. Best score 792 bits
Score difference with first non-orthologous sequence - L.chalumnae:284 P.pallidum:591

H3AJK7              	100.00%		D3B883              	100.00%
Bootstrap support for H3AJK7 as seed ortholog is 100%.
Bootstrap support for D3B883 as seed ortholog is 100%.

Group of orthologs #88. Best score 792 bits
Score difference with first non-orthologous sequence - L.chalumnae:461 P.pallidum:792

H3AS78              	100.00%		D3BMR9              	100.00%
Bootstrap support for H3AS78 as seed ortholog is 100%.
Bootstrap support for D3BMR9 as seed ortholog is 100%.

Group of orthologs #89. Best score 783 bits
Score difference with first non-orthologous sequence - L.chalumnae:783 P.pallidum:783

M3XK12              	100.00%		D3BL57              	100.00%
H3B027              	30.98%		D3BL58              	38.53%
Bootstrap support for M3XK12 as seed ortholog is 100%.
Bootstrap support for D3BL57 as seed ortholog is 100%.

Group of orthologs #90. Best score 780 bits
Score difference with first non-orthologous sequence - L.chalumnae:339 P.pallidum:480

H3AIP5              	100.00%		D3BGA0              	100.00%
H3AJR4              	43.12%		D3BG99              	45.63%
H3B4F4              	41.51%		D3BB40              	25.11%
H3AJZ5              	39.31%		
H3AAY4              	16.99%		
H3B2R0              	7.98%		
Bootstrap support for H3AIP5 as seed ortholog is 99%.
Bootstrap support for D3BGA0 as seed ortholog is 100%.

Group of orthologs #91. Best score 778 bits
Score difference with first non-orthologous sequence - L.chalumnae:778 P.pallidum:778

H3AQE4              	100.00%		D3BUZ4              	100.00%
Bootstrap support for H3AQE4 as seed ortholog is 100%.
Bootstrap support for D3BUZ4 as seed ortholog is 100%.

Group of orthologs #92. Best score 774 bits
Score difference with first non-orthologous sequence - L.chalumnae:774 P.pallidum:774

H2ZTG6              	100.00%		D3BK67              	100.00%
Bootstrap support for H2ZTG6 as seed ortholog is 100%.
Bootstrap support for D3BK67 as seed ortholog is 100%.

Group of orthologs #93. Best score 771 bits
Score difference with first non-orthologous sequence - L.chalumnae:771 P.pallidum:771

H3AYT4              	100.00%		D3BEZ7              	100.00%
Bootstrap support for H3AYT4 as seed ortholog is 100%.
Bootstrap support for D3BEZ7 as seed ortholog is 100%.

Group of orthologs #94. Best score 765 bits
Score difference with first non-orthologous sequence - L.chalumnae:431 P.pallidum:93

H3BI64              	100.00%		D3BG47              	100.00%
H3ADK4              	74.28%		
H3A9B9              	64.58%		
H3AUN5              	63.18%		
Bootstrap support for H3BI64 as seed ortholog is 100%.
Bootstrap support for D3BG47 as seed ortholog is 91%.

Group of orthologs #95. Best score 763 bits
Score difference with first non-orthologous sequence - L.chalumnae:615 P.pallidum:578

H3AWE2              	100.00%		D3BMN4              	100.00%
Bootstrap support for H3AWE2 as seed ortholog is 100%.
Bootstrap support for D3BMN4 as seed ortholog is 100%.

Group of orthologs #96. Best score 761 bits
Score difference with first non-orthologous sequence - L.chalumnae:612 P.pallidum:761

H3ALV8              	100.00%		D3AWY9              	100.00%
Bootstrap support for H3ALV8 as seed ortholog is 100%.
Bootstrap support for D3AWY9 as seed ortholog is 100%.

Group of orthologs #97. Best score 754 bits
Score difference with first non-orthologous sequence - L.chalumnae:754 P.pallidum:754

H3B7W8              	100.00%		D3BK91              	100.00%
H3B436              	62.40%		
Bootstrap support for H3B7W8 as seed ortholog is 100%.
Bootstrap support for D3BK91 as seed ortholog is 100%.

Group of orthologs #98. Best score 751 bits
Score difference with first non-orthologous sequence - L.chalumnae:751 P.pallidum:751

H3ANL6              	100.00%		D3BTW9              	100.00%
Bootstrap support for H3ANL6 as seed ortholog is 100%.
Bootstrap support for D3BTW9 as seed ortholog is 100%.

Group of orthologs #99. Best score 748 bits
Score difference with first non-orthologous sequence - L.chalumnae:748 P.pallidum:748

H3A5T3              	100.00%		D3BJF1              	100.00%
Bootstrap support for H3A5T3 as seed ortholog is 100%.
Bootstrap support for D3BJF1 as seed ortholog is 100%.

Group of orthologs #100. Best score 744 bits
Score difference with first non-orthologous sequence - L.chalumnae:744 P.pallidum:744

H3BA02              	100.00%		D3BJ15              	100.00%
Bootstrap support for H3BA02 as seed ortholog is 100%.
Bootstrap support for D3BJ15 as seed ortholog is 100%.

Group of orthologs #101. Best score 743 bits
Score difference with first non-orthologous sequence - L.chalumnae:743 P.pallidum:743

H3AX27              	100.00%		D3BN72              	100.00%
Bootstrap support for H3AX27 as seed ortholog is 100%.
Bootstrap support for D3BN72 as seed ortholog is 100%.

Group of orthologs #102. Best score 743 bits
Score difference with first non-orthologous sequence - L.chalumnae:743 P.pallidum:743

M3XI54              	100.00%		D3BJB3              	100.00%
Bootstrap support for M3XI54 as seed ortholog is 100%.
Bootstrap support for D3BJB3 as seed ortholog is 100%.

Group of orthologs #103. Best score 738 bits
Score difference with first non-orthologous sequence - L.chalumnae:738 P.pallidum:515

H2ZYP0              	100.00%		D3BFC6              	100.00%
Bootstrap support for H2ZYP0 as seed ortholog is 100%.
Bootstrap support for D3BFC6 as seed ortholog is 100%.

Group of orthologs #104. Best score 736 bits
Score difference with first non-orthologous sequence - L.chalumnae:368 P.pallidum:424

H3BD04              	100.00%		D3BHJ6              	100.00%
Bootstrap support for H3BD04 as seed ortholog is 100%.
Bootstrap support for D3BHJ6 as seed ortholog is 100%.

Group of orthologs #105. Best score 735 bits
Score difference with first non-orthologous sequence - L.chalumnae:463 P.pallidum:134

H3AKY2              	100.00%		D3B2J1              	100.00%
Bootstrap support for H3AKY2 as seed ortholog is 100%.
Bootstrap support for D3B2J1 as seed ortholog is 99%.

Group of orthologs #106. Best score 734 bits
Score difference with first non-orthologous sequence - L.chalumnae:734 P.pallidum:493

H3AHA1              	100.00%		D3BBD1              	100.00%
Bootstrap support for H3AHA1 as seed ortholog is 100%.
Bootstrap support for D3BBD1 as seed ortholog is 100%.

Group of orthologs #107. Best score 726 bits
Score difference with first non-orthologous sequence - L.chalumnae:14 P.pallidum:41

H3BBJ9              	100.00%		D3B2M1              	100.00%
H2ZUX4              	28.57%		D3BD07              	93.94%
H3A754              	5.71%		D3BM82              	66.67%
                    	       		D3BSX0              	57.58%
Bootstrap support for H3BBJ9 as seed ortholog is 78%.
Bootstrap support for D3B2M1 as seed ortholog is 97%.

Group of orthologs #108. Best score 725 bits
Score difference with first non-orthologous sequence - L.chalumnae:725 P.pallidum:544

H3AXM1              	100.00%		D3B8D9              	100.00%
Bootstrap support for H3AXM1 as seed ortholog is 100%.
Bootstrap support for D3B8D9 as seed ortholog is 100%.

Group of orthologs #109. Best score 723 bits
Score difference with first non-orthologous sequence - L.chalumnae:723 P.pallidum:723

H3AVK7              	100.00%		D3B0U2              	100.00%
Bootstrap support for H3AVK7 as seed ortholog is 100%.
Bootstrap support for D3B0U2 as seed ortholog is 100%.

Group of orthologs #110. Best score 720 bits
Score difference with first non-orthologous sequence - L.chalumnae:720 P.pallidum:720

H3AQ71              	100.00%		D3BC24              	100.00%
Bootstrap support for H3AQ71 as seed ortholog is 100%.
Bootstrap support for D3BC24 as seed ortholog is 100%.

Group of orthologs #111. Best score 718 bits
Score difference with first non-orthologous sequence - L.chalumnae:718 P.pallidum:718

H3BFE7              	100.00%		D3BHW3              	100.00%
Bootstrap support for H3BFE7 as seed ortholog is 100%.
Bootstrap support for D3BHW3 as seed ortholog is 100%.

Group of orthologs #112. Best score 717 bits
Score difference with first non-orthologous sequence - L.chalumnae:717 P.pallidum:717

H2ZWC7              	100.00%		D3BUF5              	100.00%
H3BDM8              	26.58%		
Bootstrap support for H2ZWC7 as seed ortholog is 100%.
Bootstrap support for D3BUF5 as seed ortholog is 100%.

Group of orthologs #113. Best score 717 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.pallidum:104

H3ATP1              	100.00%		D3BPD4              	100.00%
H2ZUY8              	14.64%		
Bootstrap support for H3ATP1 as seed ortholog is 91%.
Bootstrap support for D3BPD4 as seed ortholog is 95%.

Group of orthologs #114. Best score 717 bits
Score difference with first non-orthologous sequence - L.chalumnae:717 P.pallidum:717

H3BA16              	100.00%		D3B7H9              	100.00%
Bootstrap support for H3BA16 as seed ortholog is 100%.
Bootstrap support for D3B7H9 as seed ortholog is 100%.

Group of orthologs #115. Best score 717 bits
Score difference with first non-orthologous sequence - L.chalumnae:717 P.pallidum:717

H3B9L1              	100.00%		D3BVL5              	100.00%
Bootstrap support for H3B9L1 as seed ortholog is 100%.
Bootstrap support for D3BVL5 as seed ortholog is 100%.

Group of orthologs #116. Best score 715 bits
Score difference with first non-orthologous sequence - L.chalumnae:715 P.pallidum:715

H3B7N0              	100.00%		D3BBR7              	100.00%
H3B8Y9              	46.97%		
Bootstrap support for H3B7N0 as seed ortholog is 100%.
Bootstrap support for D3BBR7 as seed ortholog is 100%.

Group of orthologs #117. Best score 715 bits
Score difference with first non-orthologous sequence - L.chalumnae:715 P.pallidum:715

H3ATU0              	100.00%		D3BVH1              	100.00%
Bootstrap support for H3ATU0 as seed ortholog is 100%.
Bootstrap support for D3BVH1 as seed ortholog is 100%.

Group of orthologs #118. Best score 714 bits
Score difference with first non-orthologous sequence - L.chalumnae:714 P.pallidum:613

H3AWV3              	100.00%		D3BQU1              	100.00%
Bootstrap support for H3AWV3 as seed ortholog is 100%.
Bootstrap support for D3BQU1 as seed ortholog is 100%.

Group of orthologs #119. Best score 710 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 P.pallidum:710

H2ZV96              	100.00%		D3BM47              	100.00%
Bootstrap support for H2ZV96 as seed ortholog is 99%.
Bootstrap support for D3BM47 as seed ortholog is 100%.

Group of orthologs #120. Best score 708 bits
Score difference with first non-orthologous sequence - L.chalumnae:327 P.pallidum:331

H3AXC2              	100.00%		D3BAY0              	100.00%
Bootstrap support for H3AXC2 as seed ortholog is 99%.
Bootstrap support for D3BAY0 as seed ortholog is 64%.
Alternative seed ortholog is D3B6F6 (331 bits away from this cluster)

Group of orthologs #121. Best score 708 bits
Score difference with first non-orthologous sequence - L.chalumnae:708 P.pallidum:497

H3B4J0              	100.00%		D3BCV5              	100.00%
Bootstrap support for H3B4J0 as seed ortholog is 100%.
Bootstrap support for D3BCV5 as seed ortholog is 100%.

Group of orthologs #122. Best score 706 bits
Score difference with first non-orthologous sequence - L.chalumnae:280 P.pallidum:177

H3A1J5              	100.00%		D3B2W9              	100.00%
Bootstrap support for H3A1J5 as seed ortholog is 100%.
Bootstrap support for D3B2W9 as seed ortholog is 99%.

Group of orthologs #123. Best score 706 bits
Score difference with first non-orthologous sequence - L.chalumnae:706 P.pallidum:706

H3B4H9              	100.00%		D3BM95              	100.00%
Bootstrap support for H3B4H9 as seed ortholog is 100%.
Bootstrap support for D3BM95 as seed ortholog is 100%.

Group of orthologs #124. Best score 702 bits
Score difference with first non-orthologous sequence - L.chalumnae:702 P.pallidum:702

H2ZRK5              	100.00%		D3BEU5              	100.00%
Bootstrap support for H2ZRK5 as seed ortholog is 100%.
Bootstrap support for D3BEU5 as seed ortholog is 100%.

Group of orthologs #125. Best score 701 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 P.pallidum:701

H3A7C7              	100.00%		D3BQW2              	100.00%
H3B4P9              	92.31%		
H3A954              	91.83%		
H3ASR3              	89.90%		
H3AS44              	79.33%		
H3A580              	64.90%		
H3AGW1              	56.73%		
Bootstrap support for H3A7C7 as seed ortholog is 100%.
Bootstrap support for D3BQW2 as seed ortholog is 100%.

Group of orthologs #126. Best score 698 bits
Score difference with first non-orthologous sequence - L.chalumnae:698 P.pallidum:698

H2ZSS1              	100.00%		D3BQY0              	100.00%
Bootstrap support for H2ZSS1 as seed ortholog is 100%.
Bootstrap support for D3BQY0 as seed ortholog is 100%.

Group of orthologs #127. Best score 695 bits
Score difference with first non-orthologous sequence - L.chalumnae:239 P.pallidum:544

H3AL07              	100.00%		D3AY31              	100.00%
Bootstrap support for H3AL07 as seed ortholog is 100%.
Bootstrap support for D3AY31 as seed ortholog is 100%.

Group of orthologs #128. Best score 691 bits
Score difference with first non-orthologous sequence - L.chalumnae:691 P.pallidum:691

M3XIE8              	100.00%		D3B1R9              	100.00%
Bootstrap support for M3XIE8 as seed ortholog is 100%.
Bootstrap support for D3B1R9 as seed ortholog is 100%.

Group of orthologs #129. Best score 690 bits
Score difference with first non-orthologous sequence - L.chalumnae:690 P.pallidum:100

H2ZZ18              	100.00%		D3BRF9              	100.00%
H3ASK9              	63.89%		
H3A5J6              	46.70%		
H2ZTS2              	6.56%		
Bootstrap support for H2ZZ18 as seed ortholog is 100%.
Bootstrap support for D3BRF9 as seed ortholog is 95%.

Group of orthologs #130. Best score 690 bits
Score difference with first non-orthologous sequence - L.chalumnae:589 P.pallidum:690

H3ACG3              	100.00%		D3B6R2              	100.00%
H3B2X6              	37.76%		
Bootstrap support for H3ACG3 as seed ortholog is 100%.
Bootstrap support for D3B6R2 as seed ortholog is 100%.

Group of orthologs #131. Best score 690 bits
Score difference with first non-orthologous sequence - L.chalumnae:690 P.pallidum:388

H2ZZK0              	100.00%		D3BIZ6              	100.00%
Bootstrap support for H2ZZK0 as seed ortholog is 100%.
Bootstrap support for D3BIZ6 as seed ortholog is 100%.

Group of orthologs #132. Best score 690 bits
Score difference with first non-orthologous sequence - L.chalumnae:361 P.pallidum:387

H3B4B2              	100.00%		D3B0W9              	100.00%
Bootstrap support for H3B4B2 as seed ortholog is 99%.
Bootstrap support for D3B0W9 as seed ortholog is 100%.

Group of orthologs #133. Best score 686 bits
Score difference with first non-orthologous sequence - L.chalumnae:686 P.pallidum:686

H3B705              	100.00%		D3B5K0              	100.00%
Bootstrap support for H3B705 as seed ortholog is 100%.
Bootstrap support for D3B5K0 as seed ortholog is 100%.

Group of orthologs #134. Best score 685 bits
Score difference with first non-orthologous sequence - L.chalumnae:358 P.pallidum:685

H3AF19              	100.00%		D3AWD2              	100.00%
H3BI79              	100.00%		D3BGV6              	58.93%
H3BI74              	95.87%		
H3BI69              	89.67%		
H3AW62              	85.12%		
H3AGU3              	80.58%		
H3BF86              	66.12%		
H2ZYC4              	47.11%		
H2ZUM1              	14.05%		
Bootstrap support for H3AF19 as seed ortholog is 100%.
Bootstrap support for H3BI79 as seed ortholog is 100%.
Bootstrap support for D3AWD2 as seed ortholog is 100%.

Group of orthologs #135. Best score 685 bits
Score difference with first non-orthologous sequence - L.chalumnae:685 P.pallidum:254

H2ZXA7              	100.00%		D3B255              	100.00%
Bootstrap support for H2ZXA7 as seed ortholog is 100%.
Bootstrap support for D3B255 as seed ortholog is 100%.

Group of orthologs #136. Best score 684 bits
Score difference with first non-orthologous sequence - L.chalumnae:684 P.pallidum:684

H3AY53              	100.00%		D3BRG0              	100.00%
Bootstrap support for H3AY53 as seed ortholog is 100%.
Bootstrap support for D3BRG0 as seed ortholog is 100%.

Group of orthologs #137. Best score 683 bits
Score difference with first non-orthologous sequence - L.chalumnae:683 P.pallidum:683

H3AD90              	100.00%		D3BLC0              	100.00%
Bootstrap support for H3AD90 as seed ortholog is 100%.
Bootstrap support for D3BLC0 as seed ortholog is 100%.

Group of orthologs #138. Best score 679 bits
Score difference with first non-orthologous sequence - L.chalumnae:679 P.pallidum:679

H3AWH5              	100.00%		D3AY61              	100.00%
H3AW35              	62.07%		
Bootstrap support for H3AWH5 as seed ortholog is 100%.
Bootstrap support for D3AY61 as seed ortholog is 100%.

Group of orthologs #139. Best score 678 bits
Score difference with first non-orthologous sequence - L.chalumnae:678 P.pallidum:430

H3BFD1              	100.00%		D3B3N8              	100.00%
Bootstrap support for H3BFD1 as seed ortholog is 100%.
Bootstrap support for D3B3N8 as seed ortholog is 100%.

Group of orthologs #140. Best score 677 bits
Score difference with first non-orthologous sequence - L.chalumnae:677 P.pallidum:449

H3A857              	100.00%		D3B5E4              	100.00%
Bootstrap support for H3A857 as seed ortholog is 100%.
Bootstrap support for D3B5E4 as seed ortholog is 100%.

Group of orthologs #141. Best score 676 bits
Score difference with first non-orthologous sequence - L.chalumnae:676 P.pallidum:676

H3BEX7              	100.00%		D3BHN9              	100.00%
H3AIG6              	34.99%		
Bootstrap support for H3BEX7 as seed ortholog is 100%.
Bootstrap support for D3BHN9 as seed ortholog is 100%.

Group of orthologs #142. Best score 676 bits
Score difference with first non-orthologous sequence - L.chalumnae:676 P.pallidum:676

H3BEP4              	100.00%		D3BB83              	100.00%
Bootstrap support for H3BEP4 as seed ortholog is 100%.
Bootstrap support for D3BB83 as seed ortholog is 100%.

Group of orthologs #143. Best score 675 bits
Score difference with first non-orthologous sequence - L.chalumnae:675 P.pallidum:675

H3BFQ8              	100.00%		D3BG39              	100.00%
Bootstrap support for H3BFQ8 as seed ortholog is 100%.
Bootstrap support for D3BG39 as seed ortholog is 100%.

Group of orthologs #144. Best score 675 bits
Score difference with first non-orthologous sequence - L.chalumnae:223 P.pallidum:675

H3BIH2              	100.00%		D3BNY4              	100.00%
Bootstrap support for H3BIH2 as seed ortholog is 100%.
Bootstrap support for D3BNY4 as seed ortholog is 100%.

Group of orthologs #145. Best score 673 bits
Score difference with first non-orthologous sequence - L.chalumnae:673 P.pallidum:673

H3A861              	100.00%		D3BK59              	100.00%
Bootstrap support for H3A861 as seed ortholog is 100%.
Bootstrap support for D3BK59 as seed ortholog is 100%.

Group of orthologs #146. Best score 670 bits
Score difference with first non-orthologous sequence - L.chalumnae:670 P.pallidum:522

H3BHY3              	100.00%		D3BK16              	100.00%
Bootstrap support for H3BHY3 as seed ortholog is 100%.
Bootstrap support for D3BK16 as seed ortholog is 100%.

Group of orthologs #147. Best score 669 bits
Score difference with first non-orthologous sequence - L.chalumnae:555 P.pallidum:569

H3BB48              	100.00%		D3B5K2              	100.00%
H3A405              	11.82%		
Bootstrap support for H3BB48 as seed ortholog is 100%.
Bootstrap support for D3B5K2 as seed ortholog is 100%.

Group of orthologs #148. Best score 668 bits
Score difference with first non-orthologous sequence - L.chalumnae:668 P.pallidum:668

H3AZ82              	100.00%		D3BFA6              	100.00%
H3BIK9              	41.05%		
H3B2X1              	26.40%		
Bootstrap support for H3AZ82 as seed ortholog is 100%.
Bootstrap support for D3BFA6 as seed ortholog is 100%.

Group of orthologs #149. Best score 668 bits
Score difference with first non-orthologous sequence - L.chalumnae:668 P.pallidum:668

H3AFT5              	100.00%		D3BSA3              	100.00%
Bootstrap support for H3AFT5 as seed ortholog is 100%.
Bootstrap support for D3BSA3 as seed ortholog is 100%.

Group of orthologs #150. Best score 662 bits
Score difference with first non-orthologous sequence - L.chalumnae:662 P.pallidum:662

H3AUF4              	100.00%		D3BFQ1              	100.00%
Bootstrap support for H3AUF4 as seed ortholog is 100%.
Bootstrap support for D3BFQ1 as seed ortholog is 100%.

Group of orthologs #151. Best score 661 bits
Score difference with first non-orthologous sequence - L.chalumnae:661 P.pallidum:661

H3BHN2              	100.00%		D3B1H9              	100.00%
H3AV76              	43.27%		
Bootstrap support for H3BHN2 as seed ortholog is 100%.
Bootstrap support for D3B1H9 as seed ortholog is 100%.

Group of orthologs #152. Best score 661 bits
Score difference with first non-orthologous sequence - L.chalumnae:661 P.pallidum:444

H3APY1              	100.00%		D3BPJ6              	100.00%
Bootstrap support for H3APY1 as seed ortholog is 100%.
Bootstrap support for D3BPJ6 as seed ortholog is 100%.

Group of orthologs #153. Best score 661 bits
Score difference with first non-orthologous sequence - L.chalumnae:661 P.pallidum:661

H3BHT6              	100.00%		D3BAM8              	100.00%
Bootstrap support for H3BHT6 as seed ortholog is 100%.
Bootstrap support for D3BAM8 as seed ortholog is 100%.

Group of orthologs #154. Best score 659 bits
Score difference with first non-orthologous sequence - L.chalumnae:659 P.pallidum:659

H3AG44              	100.00%		D3B474              	100.00%
H3AIC7              	72.59%		
Bootstrap support for H3AG44 as seed ortholog is 100%.
Bootstrap support for D3B474 as seed ortholog is 100%.

Group of orthologs #155. Best score 659 bits
Score difference with first non-orthologous sequence - L.chalumnae:659 P.pallidum:659

H3AAK0              	100.00%		D3B6H8              	100.00%
Bootstrap support for H3AAK0 as seed ortholog is 100%.
Bootstrap support for D3B6H8 as seed ortholog is 100%.

Group of orthologs #156. Best score 658 bits
Score difference with first non-orthologous sequence - L.chalumnae:658 P.pallidum:97

H3AFR8              	100.00%		D3B5W1              	100.00%
H3B7D9              	67.03%		
Bootstrap support for H3AFR8 as seed ortholog is 100%.
Bootstrap support for D3B5W1 as seed ortholog is 85%.

Group of orthologs #157. Best score 657 bits
Score difference with first non-orthologous sequence - L.chalumnae:288 P.pallidum:16

H3A7G0              	100.00%		D3B4Y9              	100.00%
H3A9W0              	42.71%		
Bootstrap support for H3A7G0 as seed ortholog is 100%.
Bootstrap support for D3B4Y9 as seed ortholog is 57%.
Alternative seed ortholog is D3BDW2 (16 bits away from this cluster)

Group of orthologs #158. Best score 657 bits
Score difference with first non-orthologous sequence - L.chalumnae:166 P.pallidum:657

H3A0A9              	100.00%		D3BRS6              	100.00%
H3BFK3              	12.16%		
Bootstrap support for H3A0A9 as seed ortholog is 99%.
Bootstrap support for D3BRS6 as seed ortholog is 100%.

Group of orthologs #159. Best score 656 bits
Score difference with first non-orthologous sequence - L.chalumnae:656 P.pallidum:656

H3AQ97              	100.00%		D3B3Y2              	100.00%
Bootstrap support for H3AQ97 as seed ortholog is 100%.
Bootstrap support for D3B3Y2 as seed ortholog is 100%.

Group of orthologs #160. Best score 653 bits
Score difference with first non-orthologous sequence - L.chalumnae:305 P.pallidum:280

H3AWF0              	100.00%		D3B1M4              	100.00%
Bootstrap support for H3AWF0 as seed ortholog is 100%.
Bootstrap support for D3B1M4 as seed ortholog is 100%.

Group of orthologs #161. Best score 652 bits
Score difference with first non-orthologous sequence - L.chalumnae:434 P.pallidum:416

H3BGW4              	100.00%		D3B1M7              	100.00%
Bootstrap support for H3BGW4 as seed ortholog is 100%.
Bootstrap support for D3B1M7 as seed ortholog is 100%.

Group of orthologs #162. Best score 651 bits
Score difference with first non-orthologous sequence - L.chalumnae:651 P.pallidum:651

H3A579              	100.00%		D3AWW1              	100.00%
Bootstrap support for H3A579 as seed ortholog is 100%.
Bootstrap support for D3AWW1 as seed ortholog is 100%.

Group of orthologs #163. Best score 649 bits
Score difference with first non-orthologous sequence - L.chalumnae:649 P.pallidum:578

H2ZUS7              	100.00%		D3BII3              	100.00%
H3AQY8              	37.34%		
Bootstrap support for H2ZUS7 as seed ortholog is 100%.
Bootstrap support for D3BII3 as seed ortholog is 100%.

Group of orthologs #164. Best score 648 bits
Score difference with first non-orthologous sequence - L.chalumnae:648 P.pallidum:648

H3B4J9              	100.00%		D3BSJ1              	100.00%
Bootstrap support for H3B4J9 as seed ortholog is 100%.
Bootstrap support for D3BSJ1 as seed ortholog is 100%.

Group of orthologs #165. Best score 647 bits
Score difference with first non-orthologous sequence - L.chalumnae:647 P.pallidum:647

H3B8M8              	100.00%		D3AVN9              	100.00%
Bootstrap support for H3B8M8 as seed ortholog is 100%.
Bootstrap support for D3AVN9 as seed ortholog is 100%.

Group of orthologs #166. Best score 647 bits
Score difference with first non-orthologous sequence - L.chalumnae:647 P.pallidum:647

H3ATJ7              	100.00%		D3BHM5              	100.00%
Bootstrap support for H3ATJ7 as seed ortholog is 100%.
Bootstrap support for D3BHM5 as seed ortholog is 100%.

Group of orthologs #167. Best score 646 bits
Score difference with first non-orthologous sequence - L.chalumnae:646 P.pallidum:646

H3BGP1              	100.00%		D3AYA7              	100.00%
H3B242              	18.80%		D3BVE1              	27.32%
Bootstrap support for H3BGP1 as seed ortholog is 100%.
Bootstrap support for D3AYA7 as seed ortholog is 100%.

Group of orthologs #168. Best score 646 bits
Score difference with first non-orthologous sequence - L.chalumnae:510 P.pallidum:247

H3A9P8              	100.00%		D3BB49              	100.00%
H3AWQ6              	7.34%		
Bootstrap support for H3A9P8 as seed ortholog is 100%.
Bootstrap support for D3BB49 as seed ortholog is 99%.

Group of orthologs #169. Best score 645 bits
Score difference with first non-orthologous sequence - L.chalumnae:14 P.pallidum:536

H3AW63              	100.00%		D3B6W7              	100.00%
H3BGN7              	14.66%		
Bootstrap support for H3AW63 as seed ortholog is 70%.
Alternative seed ortholog is H3BGI7 (14 bits away from this cluster)
Bootstrap support for D3B6W7 as seed ortholog is 100%.

Group of orthologs #170. Best score 645 bits
Score difference with first non-orthologous sequence - L.chalumnae:645 P.pallidum:474

H3AM02              	100.00%		D3B0K9              	100.00%
Bootstrap support for H3AM02 as seed ortholog is 100%.
Bootstrap support for D3B0K9 as seed ortholog is 100%.

Group of orthologs #171. Best score 644 bits
Score difference with first non-orthologous sequence - L.chalumnae:644 P.pallidum:644

H3A4C1              	100.00%		D3BPC0              	100.00%
Bootstrap support for H3A4C1 as seed ortholog is 100%.
Bootstrap support for D3BPC0 as seed ortholog is 100%.

Group of orthologs #172. Best score 640 bits
Score difference with first non-orthologous sequence - L.chalumnae:415 P.pallidum:305

H3B659              	100.00%		D3B6E1              	100.00%
Bootstrap support for H3B659 as seed ortholog is 100%.
Bootstrap support for D3B6E1 as seed ortholog is 100%.

Group of orthologs #173. Best score 639 bits
Score difference with first non-orthologous sequence - L.chalumnae:639 P.pallidum:639

H3AZF1              	100.00%		D3AZW1              	100.00%
H3AKS0              	30.78%		
Bootstrap support for H3AZF1 as seed ortholog is 100%.
Bootstrap support for D3AZW1 as seed ortholog is 100%.

Group of orthologs #174. Best score 639 bits
Score difference with first non-orthologous sequence - L.chalumnae:639 P.pallidum:639

H3A776              	100.00%		D3BTG6              	100.00%
Bootstrap support for H3A776 as seed ortholog is 100%.
Bootstrap support for D3BTG6 as seed ortholog is 100%.

Group of orthologs #175. Best score 638 bits
Score difference with first non-orthologous sequence - L.chalumnae:470 P.pallidum:478

H3AXA5              	100.00%		D3BVG6              	100.00%
H3AWA2              	45.26%		D3AY71              	10.12%
H2ZW02              	19.00%		
H3B7S7              	13.01%		
Bootstrap support for H3AXA5 as seed ortholog is 100%.
Bootstrap support for D3BVG6 as seed ortholog is 100%.

Group of orthologs #176. Best score 638 bits
Score difference with first non-orthologous sequence - L.chalumnae:638 P.pallidum:299

H3B286              	100.00%		D3B6W8              	100.00%
Bootstrap support for H3B286 as seed ortholog is 100%.
Bootstrap support for D3B6W8 as seed ortholog is 100%.

Group of orthologs #177. Best score 637 bits
Score difference with first non-orthologous sequence - L.chalumnae:637 P.pallidum:637

H3A1Q8              	100.00%		D3BVL2              	100.00%
Bootstrap support for H3A1Q8 as seed ortholog is 100%.
Bootstrap support for D3BVL2 as seed ortholog is 100%.

Group of orthologs #178. Best score 637 bits
Score difference with first non-orthologous sequence - L.chalumnae:438 P.pallidum:498

H3BGD6              	100.00%		D3BUA7              	100.00%
Bootstrap support for H3BGD6 as seed ortholog is 100%.
Bootstrap support for D3BUA7 as seed ortholog is 100%.

Group of orthologs #179. Best score 636 bits
Score difference with first non-orthologous sequence - L.chalumnae:636 P.pallidum:636

H3A5F9              	100.00%		D3AYV1              	100.00%
Bootstrap support for H3A5F9 as seed ortholog is 100%.
Bootstrap support for D3AYV1 as seed ortholog is 100%.

Group of orthologs #180. Best score 633 bits
Score difference with first non-orthologous sequence - L.chalumnae:236 P.pallidum:633

H3B0I6              	100.00%		D3B143              	100.00%
H3AKR4              	37.07%		
Bootstrap support for H3B0I6 as seed ortholog is 99%.
Bootstrap support for D3B143 as seed ortholog is 100%.

Group of orthologs #181. Best score 633 bits
Score difference with first non-orthologous sequence - L.chalumnae:633 P.pallidum:633

H3AAU5              	100.00%		D3BHH5              	100.00%
Bootstrap support for H3AAU5 as seed ortholog is 100%.
Bootstrap support for D3BHH5 as seed ortholog is 100%.

Group of orthologs #182. Best score 632 bits
Score difference with first non-orthologous sequence - L.chalumnae:237 P.pallidum:259

H3BE26              	100.00%		D3B8Z2              	100.00%
                    	       		D3BQ49              	15.96%
                    	       		D3BLZ8              	6.76%
Bootstrap support for H3BE26 as seed ortholog is 99%.
Bootstrap support for D3B8Z2 as seed ortholog is 99%.

Group of orthologs #183. Best score 631 bits
Score difference with first non-orthologous sequence - L.chalumnae:399 P.pallidum:352

H3A501              	100.00%		D3B6I7              	100.00%
H3A6N8              	100.00%		
Bootstrap support for H3A501 as seed ortholog is 100%.
Bootstrap support for H3A6N8 as seed ortholog is 100%.
Bootstrap support for D3B6I7 as seed ortholog is 100%.

Group of orthologs #184. Best score 631 bits
Score difference with first non-orthologous sequence - L.chalumnae:631 P.pallidum:631

H3AZU8              	100.00%		D3B6S4              	100.00%
Bootstrap support for H3AZU8 as seed ortholog is 100%.
Bootstrap support for D3B6S4 as seed ortholog is 100%.

Group of orthologs #185. Best score 628 bits
Score difference with first non-orthologous sequence - L.chalumnae:340 P.pallidum:628

H3BC00              	100.00%		D3B0C2              	100.00%
M3XGJ9              	7.64%		D3AZN2              	41.05%
Bootstrap support for H3BC00 as seed ortholog is 100%.
Bootstrap support for D3B0C2 as seed ortholog is 100%.

Group of orthologs #186. Best score 627 bits
Score difference with first non-orthologous sequence - L.chalumnae:627 P.pallidum:384

H3A9R5              	100.00%		D3B344              	100.00%
Bootstrap support for H3A9R5 as seed ortholog is 100%.
Bootstrap support for D3B344 as seed ortholog is 100%.

Group of orthologs #187. Best score 626 bits
Score difference with first non-orthologous sequence - L.chalumnae:35 P.pallidum:105

H3A8H4              	100.00%		D3BV03              	100.00%
H3A979              	44.25%		
H3B961              	33.40%		
Bootstrap support for H3A8H4 as seed ortholog is 60%.
Alternative seed ortholog is H3AF09 (35 bits away from this cluster)
Bootstrap support for D3BV03 as seed ortholog is 89%.

Group of orthologs #188. Best score 626 bits
Score difference with first non-orthologous sequence - L.chalumnae:626 P.pallidum:626

H3B5D7              	100.00%		D3B3Q9              	100.00%
H3A988              	37.14%		
Bootstrap support for H3B5D7 as seed ortholog is 100%.
Bootstrap support for D3B3Q9 as seed ortholog is 100%.

Group of orthologs #189. Best score 626 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.pallidum:626

H3A2M5              	100.00%		D3AZB8              	100.00%
Bootstrap support for H3A2M5 as seed ortholog is 99%.
Bootstrap support for D3AZB8 as seed ortholog is 100%.

Group of orthologs #190. Best score 625 bits
Score difference with first non-orthologous sequence - L.chalumnae:294 P.pallidum:625

H3B172              	100.00%		D3BRF2              	100.00%
Bootstrap support for H3B172 as seed ortholog is 100%.
Bootstrap support for D3BRF2 as seed ortholog is 100%.

Group of orthologs #191. Best score 623 bits
Score difference with first non-orthologous sequence - L.chalumnae:623 P.pallidum:623

H3B9X9              	100.00%		D3BUD5              	100.00%
H3BAP0              	40.11%		
Bootstrap support for H3B9X9 as seed ortholog is 100%.
Bootstrap support for D3BUD5 as seed ortholog is 100%.

Group of orthologs #192. Best score 623 bits
Score difference with first non-orthologous sequence - L.chalumnae:623 P.pallidum:302

H3AQX3              	100.00%		D3BGX5              	100.00%
Bootstrap support for H3AQX3 as seed ortholog is 100%.
Bootstrap support for D3BGX5 as seed ortholog is 100%.

Group of orthologs #193. Best score 620 bits
Score difference with first non-orthologous sequence - L.chalumnae:620 P.pallidum:381

H3AIZ6              	100.00%		D3B244              	100.00%
Bootstrap support for H3AIZ6 as seed ortholog is 100%.
Bootstrap support for D3B244 as seed ortholog is 100%.

Group of orthologs #194. Best score 619 bits
Score difference with first non-orthologous sequence - L.chalumnae:506 P.pallidum:517

H3AVK8              	100.00%		D3BHU1              	100.00%
Bootstrap support for H3AVK8 as seed ortholog is 100%.
Bootstrap support for D3BHU1 as seed ortholog is 100%.

Group of orthologs #195. Best score 619 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.pallidum:65

H3B3T4              	100.00%		D3BEC9              	100.00%
Bootstrap support for H3B3T4 as seed ortholog is 99%.
Bootstrap support for D3BEC9 as seed ortholog is 97%.

Group of orthologs #196. Best score 619 bits
Score difference with first non-orthologous sequence - L.chalumnae:267 P.pallidum:384

H3B5Y6              	100.00%		D3BQM3              	100.00%
Bootstrap support for H3B5Y6 as seed ortholog is 99%.
Bootstrap support for D3BQM3 as seed ortholog is 100%.

Group of orthologs #197. Best score 618 bits
Score difference with first non-orthologous sequence - L.chalumnae:336 P.pallidum:618

H3ALP2              	100.00%		D3BUD3              	100.00%
H3B8J9              	22.96%		D3BUC4              	43.29%
H3BBB9              	20.37%		
Bootstrap support for H3ALP2 as seed ortholog is 100%.
Bootstrap support for D3BUD3 as seed ortholog is 100%.

Group of orthologs #198. Best score 613 bits
Score difference with first non-orthologous sequence - L.chalumnae:613 P.pallidum:613

H3A2H9              	100.00%		D3BE79              	100.00%
Bootstrap support for H3A2H9 as seed ortholog is 100%.
Bootstrap support for D3BE79 as seed ortholog is 100%.

Group of orthologs #199. Best score 612 bits
Score difference with first non-orthologous sequence - L.chalumnae:612 P.pallidum:612

H3B206              	100.00%		D3AWX0              	100.00%
Bootstrap support for H3B206 as seed ortholog is 100%.
Bootstrap support for D3AWX0 as seed ortholog is 100%.

Group of orthologs #200. Best score 610 bits
Score difference with first non-orthologous sequence - L.chalumnae:610 P.pallidum:153

H3ACZ9              	100.00%		D3BRU6              	100.00%
H3B9Q4              	33.80%		
Bootstrap support for H3ACZ9 as seed ortholog is 100%.
Bootstrap support for D3BRU6 as seed ortholog is 99%.

Group of orthologs #201. Best score 609 bits
Score difference with first non-orthologous sequence - L.chalumnae:515 P.pallidum:382

H3A9D1              	100.00%		D3BFH7              	100.00%
Bootstrap support for H3A9D1 as seed ortholog is 100%.
Bootstrap support for D3BFH7 as seed ortholog is 100%.

Group of orthologs #202. Best score 607 bits
Score difference with first non-orthologous sequence - L.chalumnae:483 P.pallidum:501

H3B2R7              	100.00%		D3BE83              	100.00%
Bootstrap support for H3B2R7 as seed ortholog is 100%.
Bootstrap support for D3BE83 as seed ortholog is 100%.

Group of orthologs #203. Best score 606 bits
Score difference with first non-orthologous sequence - L.chalumnae:450 P.pallidum:447

H3AHS7              	100.00%		D3BDZ2              	100.00%
Bootstrap support for H3AHS7 as seed ortholog is 100%.
Bootstrap support for D3BDZ2 as seed ortholog is 100%.

Group of orthologs #204. Best score 605 bits
Score difference with first non-orthologous sequence - L.chalumnae:605 P.pallidum:605

H3AXW8              	100.00%		D3B1K5              	100.00%
H3BAN6              	17.88%		
Bootstrap support for H3AXW8 as seed ortholog is 100%.
Bootstrap support for D3B1K5 as seed ortholog is 100%.

Group of orthologs #205. Best score 602 bits
Score difference with first non-orthologous sequence - L.chalumnae:490 P.pallidum:602

H3B528              	100.00%		D3BP87              	100.00%
H3B7K3              	56.32%		D3BH75              	21.24%
H2ZXR3              	11.11%		
Bootstrap support for H3B528 as seed ortholog is 100%.
Bootstrap support for D3BP87 as seed ortholog is 100%.

Group of orthologs #206. Best score 602 bits
Score difference with first non-orthologous sequence - L.chalumnae:602 P.pallidum:602

H2ZTU5              	100.00%		D3BC51              	100.00%
H2ZZT5              	26.65%		
Bootstrap support for H2ZTU5 as seed ortholog is 100%.
Bootstrap support for D3BC51 as seed ortholog is 100%.

Group of orthologs #207. Best score 601 bits
Score difference with first non-orthologous sequence - L.chalumnae:601 P.pallidum:116

H3AY86              	100.00%		D3B337              	100.00%
                    	       		D3B1J7              	26.49%
                    	       		D3AWI5              	25.72%
                    	       		D3B6Y6              	24.72%
                    	       		D3BR90              	23.96%
                    	       		D3B6Z1              	23.94%
                    	       		D3BN60              	23.87%
                    	       		D3B3H8              	22.82%
                    	       		D3BSJ8              	22.72%
                    	       		D3BN37              	22.65%
                    	       		D3BJX3              	21.10%
                    	       		D3B7P7              	20.23%
                    	       		D3B7M8              	13.01%
                    	       		D3B7M6              	13.00%
                    	       		D3AW22              	5.24%
Bootstrap support for H3AY86 as seed ortholog is 100%.
Bootstrap support for D3B337 as seed ortholog is 89%.

Group of orthologs #208. Best score 600 bits
Score difference with first non-orthologous sequence - L.chalumnae:600 P.pallidum:600

H3AKH6              	100.00%		D3B5X2              	100.00%
Bootstrap support for H3AKH6 as seed ortholog is 100%.
Bootstrap support for D3B5X2 as seed ortholog is 100%.

Group of orthologs #209. Best score 599 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.pallidum:221

H3A5T0              	100.00%		D3BKM7              	100.00%
Bootstrap support for H3A5T0 as seed ortholog is 95%.
Bootstrap support for D3BKM7 as seed ortholog is 99%.

Group of orthologs #210. Best score 598 bits
Score difference with first non-orthologous sequence - L.chalumnae:598 P.pallidum:598

H3B133              	100.00%		D3BN75              	100.00%
Bootstrap support for H3B133 as seed ortholog is 100%.
Bootstrap support for D3BN75 as seed ortholog is 100%.

Group of orthologs #211. Best score 597 bits
Score difference with first non-orthologous sequence - L.chalumnae:345 P.pallidum:364

H3AEJ1              	100.00%		D3BDI4              	100.00%
H2ZZU9              	69.47%		
Bootstrap support for H3AEJ1 as seed ortholog is 100%.
Bootstrap support for D3BDI4 as seed ortholog is 100%.

Group of orthologs #212. Best score 595 bits
Score difference with first non-orthologous sequence - L.chalumnae:201 P.pallidum:595

H3AKB8              	100.00%		D3BRX9              	100.00%
Bootstrap support for H3AKB8 as seed ortholog is 99%.
Bootstrap support for D3BRX9 as seed ortholog is 100%.

Group of orthologs #213. Best score 594 bits
Score difference with first non-orthologous sequence - L.chalumnae:594 P.pallidum:594

H3BEC1              	100.00%		D3BIK5              	100.00%
H3ASC3              	20.16%		D3BIK6              	25.30%
                    	       		D3B222              	16.58%
Bootstrap support for H3BEC1 as seed ortholog is 100%.
Bootstrap support for D3BIK5 as seed ortholog is 100%.

Group of orthologs #214. Best score 594 bits
Score difference with first non-orthologous sequence - L.chalumnae:537 P.pallidum:496

H2ZV38              	100.00%		D3B1F9              	100.00%
Bootstrap support for H2ZV38 as seed ortholog is 100%.
Bootstrap support for D3B1F9 as seed ortholog is 100%.

Group of orthologs #215. Best score 593 bits
Score difference with first non-orthologous sequence - L.chalumnae:532 P.pallidum:593

H3AWL1              	100.00%		D3BQY2              	100.00%
Bootstrap support for H3AWL1 as seed ortholog is 100%.
Bootstrap support for D3BQY2 as seed ortholog is 100%.

Group of orthologs #216. Best score 592 bits
Score difference with first non-orthologous sequence - L.chalumnae:592 P.pallidum:592

H3A922              	100.00%		D3BE62              	100.00%
Bootstrap support for H3A922 as seed ortholog is 100%.
Bootstrap support for D3BE62 as seed ortholog is 100%.

Group of orthologs #217. Best score 592 bits
Score difference with first non-orthologous sequence - L.chalumnae:592 P.pallidum:592

H3AYV1              	100.00%		D3B6W1              	100.00%
Bootstrap support for H3AYV1 as seed ortholog is 100%.
Bootstrap support for D3B6W1 as seed ortholog is 100%.

Group of orthologs #218. Best score 592 bits
Score difference with first non-orthologous sequence - L.chalumnae:592 P.pallidum:592

H3B2Y2              	100.00%		D3B5W3              	100.00%
Bootstrap support for H3B2Y2 as seed ortholog is 100%.
Bootstrap support for D3B5W3 as seed ortholog is 100%.

Group of orthologs #219. Best score 590 bits
Score difference with first non-orthologous sequence - L.chalumnae:590 P.pallidum:590

H3B646              	100.00%		D3B3I9              	100.00%
Bootstrap support for H3B646 as seed ortholog is 100%.
Bootstrap support for D3B3I9 as seed ortholog is 100%.

Group of orthologs #220. Best score 589 bits
Score difference with first non-orthologous sequence - L.chalumnae:223 P.pallidum:258

H3AVR0              	100.00%		D3B2M6              	100.00%
H2ZZN2              	32.24%		
Bootstrap support for H3AVR0 as seed ortholog is 100%.
Bootstrap support for D3B2M6 as seed ortholog is 100%.

Group of orthologs #221. Best score 589 bits
Score difference with first non-orthologous sequence - L.chalumnae:589 P.pallidum:589

H3B1D6              	100.00%		D3AWL5              	100.00%
Bootstrap support for H3B1D6 as seed ortholog is 100%.
Bootstrap support for D3AWL5 as seed ortholog is 100%.

Group of orthologs #222. Best score 585 bits
Score difference with first non-orthologous sequence - L.chalumnae:585 P.pallidum:585

H3AIE0              	100.00%		D3BQJ8              	100.00%
H3A423              	20.42%		
Bootstrap support for H3AIE0 as seed ortholog is 100%.
Bootstrap support for D3BQJ8 as seed ortholog is 100%.

Group of orthologs #223. Best score 585 bits
Score difference with first non-orthologous sequence - L.chalumnae:503 P.pallidum:342

M3XI24              	100.00%		D3BQP4              	100.00%
Bootstrap support for M3XI24 as seed ortholog is 100%.
Bootstrap support for D3BQP4 as seed ortholog is 100%.

Group of orthologs #224. Best score 580 bits
Score difference with first non-orthologous sequence - L.chalumnae:580 P.pallidum:580

H3AH00              	100.00%		D3B4I5              	100.00%
Bootstrap support for H3AH00 as seed ortholog is 100%.
Bootstrap support for D3B4I5 as seed ortholog is 100%.

Group of orthologs #225. Best score 579 bits
Score difference with first non-orthologous sequence - L.chalumnae:579 P.pallidum:387

H3AYD3              	100.00%		D3BA83              	100.00%
Bootstrap support for H3AYD3 as seed ortholog is 100%.
Bootstrap support for D3BA83 as seed ortholog is 100%.

Group of orthologs #226. Best score 577 bits
Score difference with first non-orthologous sequence - L.chalumnae:577 P.pallidum:577

H3AX57              	100.00%		D3B6C8              	100.00%
Bootstrap support for H3AX57 as seed ortholog is 100%.
Bootstrap support for D3B6C8 as seed ortholog is 100%.

Group of orthologs #227. Best score 577 bits
Score difference with first non-orthologous sequence - L.chalumnae:577 P.pallidum:577

H3AKG0              	100.00%		D3BTZ2              	100.00%
Bootstrap support for H3AKG0 as seed ortholog is 100%.
Bootstrap support for D3BTZ2 as seed ortholog is 100%.

Group of orthologs #228. Best score 574 bits
Score difference with first non-orthologous sequence - L.chalumnae:574 P.pallidum:574

H3BA48              	100.00%		D3BJL2              	100.00%
Bootstrap support for H3BA48 as seed ortholog is 100%.
Bootstrap support for D3BJL2 as seed ortholog is 100%.

Group of orthologs #229. Best score 571 bits
Score difference with first non-orthologous sequence - L.chalumnae:571 P.pallidum:571

H3BDZ6              	100.00%		D3B6S5              	100.00%
Bootstrap support for H3BDZ6 as seed ortholog is 100%.
Bootstrap support for D3B6S5 as seed ortholog is 100%.

Group of orthologs #230. Best score 569 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 P.pallidum:371

H3B1M4              	100.00%		D3B3K7              	100.00%
Bootstrap support for H3B1M4 as seed ortholog is 99%.
Bootstrap support for D3B3K7 as seed ortholog is 100%.

Group of orthologs #231. Best score 569 bits
Score difference with first non-orthologous sequence - L.chalumnae:405 P.pallidum:385

H3AQP2              	100.00%		D3BET6              	100.00%
Bootstrap support for H3AQP2 as seed ortholog is 100%.
Bootstrap support for D3BET6 as seed ortholog is 100%.

Group of orthologs #232. Best score 567 bits
Score difference with first non-orthologous sequence - L.chalumnae:567 P.pallidum:567

H3BFM4              	100.00%		D3BQM7              	100.00%
H3AHP8              	31.14%		
Bootstrap support for H3BFM4 as seed ortholog is 100%.
Bootstrap support for D3BQM7 as seed ortholog is 100%.

Group of orthologs #233. Best score 567 bits
Score difference with first non-orthologous sequence - L.chalumnae:153 P.pallidum:246

H3BG78              	100.00%		D3BM73              	100.00%
Bootstrap support for H3BG78 as seed ortholog is 96%.
Bootstrap support for D3BM73 as seed ortholog is 99%.

Group of orthologs #234. Best score 566 bits
Score difference with first non-orthologous sequence - L.chalumnae:269 P.pallidum:242

H3B696              	100.00%		D3BP51              	100.00%
H3A0X9              	63.12%		
H3B6F8              	53.25%		
H3A468              	32.99%		
H3A5A9              	12.21%		
Bootstrap support for H3B696 as seed ortholog is 100%.
Bootstrap support for D3BP51 as seed ortholog is 100%.

Group of orthologs #235. Best score 564 bits
Score difference with first non-orthologous sequence - L.chalumnae:564 P.pallidum:564

H3AFD7              	100.00%		D3BB77              	100.00%
Bootstrap support for H3AFD7 as seed ortholog is 100%.
Bootstrap support for D3BB77 as seed ortholog is 100%.

Group of orthologs #236. Best score 562 bits
Score difference with first non-orthologous sequence - L.chalumnae:562 P.pallidum:562

H2ZZN4              	100.00%		D3BMN8              	100.00%
Bootstrap support for H2ZZN4 as seed ortholog is 100%.
Bootstrap support for D3BMN8 as seed ortholog is 100%.

Group of orthologs #237. Best score 561 bits
Score difference with first non-orthologous sequence - L.chalumnae:561 P.pallidum:561

H3A389              	100.00%		D3B427              	100.00%
H3A8E3              	49.57%		
Bootstrap support for H3A389 as seed ortholog is 100%.
Bootstrap support for D3B427 as seed ortholog is 100%.

Group of orthologs #238. Best score 561 bits
Score difference with first non-orthologous sequence - L.chalumnae:291 P.pallidum:561

H3AGC7              	100.00%		D3B0M9              	100.00%
Bootstrap support for H3AGC7 as seed ortholog is 100%.
Bootstrap support for D3B0M9 as seed ortholog is 100%.

Group of orthologs #239. Best score 561 bits
Score difference with first non-orthologous sequence - L.chalumnae:240 P.pallidum:561

H3ALM5              	100.00%		D3BV25              	100.00%
Bootstrap support for H3ALM5 as seed ortholog is 99%.
Bootstrap support for D3BV25 as seed ortholog is 100%.

Group of orthologs #240. Best score 560 bits
Score difference with first non-orthologous sequence - L.chalumnae:560 P.pallidum:560

H3AGW8              	100.00%		D3B731              	100.00%
Bootstrap support for H3AGW8 as seed ortholog is 100%.
Bootstrap support for D3B731 as seed ortholog is 100%.

Group of orthologs #241. Best score 560 bits
Score difference with first non-orthologous sequence - L.chalumnae:560 P.pallidum:560

H3B1E7              	100.00%		D3AY94              	100.00%
Bootstrap support for H3B1E7 as seed ortholog is 100%.
Bootstrap support for D3AY94 as seed ortholog is 100%.

Group of orthologs #242. Best score 560 bits
Score difference with first non-orthologous sequence - L.chalumnae:560 P.pallidum:412

H3BHL8              	100.00%		D3BJ28              	100.00%
Bootstrap support for H3BHL8 as seed ortholog is 100%.
Bootstrap support for D3BJ28 as seed ortholog is 100%.

Group of orthologs #243. Best score 559 bits
Score difference with first non-orthologous sequence - L.chalumnae:559 P.pallidum:559

H3AYK7              	100.00%		D3BI12              	100.00%
Bootstrap support for H3AYK7 as seed ortholog is 100%.
Bootstrap support for D3BI12 as seed ortholog is 100%.

Group of orthologs #244. Best score 559 bits
Score difference with first non-orthologous sequence - L.chalumnae:559 P.pallidum:559

H3BHP1              	100.00%		D3BU59              	100.00%
Bootstrap support for H3BHP1 as seed ortholog is 100%.
Bootstrap support for D3BU59 as seed ortholog is 100%.

Group of orthologs #245. Best score 558 bits
Score difference with first non-orthologous sequence - L.chalumnae:558 P.pallidum:558

H3AG19              	100.00%		D3B7A6              	100.00%
H3ASG2              	100.00%		
H3A196              	51.78%		
Bootstrap support for H3AG19 as seed ortholog is 100%.
Bootstrap support for H3ASG2 as seed ortholog is 100%.
Bootstrap support for D3B7A6 as seed ortholog is 100%.

Group of orthologs #246. Best score 558 bits
Score difference with first non-orthologous sequence - L.chalumnae:558 P.pallidum:558

H2ZYM5              	100.00%		D3B8G9              	100.00%
Bootstrap support for H2ZYM5 as seed ortholog is 100%.
Bootstrap support for D3B8G9 as seed ortholog is 100%.

Group of orthologs #247. Best score 557 bits
Score difference with first non-orthologous sequence - L.chalumnae:292 P.pallidum:340

H3BBN1              	100.00%		D3BEH4              	100.00%
Bootstrap support for H3BBN1 as seed ortholog is 100%.
Bootstrap support for D3BEH4 as seed ortholog is 100%.

Group of orthologs #248. Best score 556 bits
Score difference with first non-orthologous sequence - L.chalumnae:272 P.pallidum:155

H3BA28              	100.00%		D3BKP8              	100.00%
H3AMF8              	83.67%		
Bootstrap support for H3BA28 as seed ortholog is 100%.
Bootstrap support for D3BKP8 as seed ortholog is 100%.

Group of orthologs #249. Best score 555 bits
Score difference with first non-orthologous sequence - L.chalumnae:555 P.pallidum:323

H3A7X9              	100.00%		D3AVH5              	100.00%
Bootstrap support for H3A7X9 as seed ortholog is 100%.
Bootstrap support for D3AVH5 as seed ortholog is 99%.

Group of orthologs #250. Best score 555 bits
Score difference with first non-orthologous sequence - L.chalumnae:276 P.pallidum:283

H3B087              	100.00%		D3AWF9              	100.00%
Bootstrap support for H3B087 as seed ortholog is 100%.
Bootstrap support for D3AWF9 as seed ortholog is 100%.

Group of orthologs #251. Best score 554 bits
Score difference with first non-orthologous sequence - L.chalumnae:211 P.pallidum:554

H3AN71              	100.00%		D3AZM1              	100.00%
Bootstrap support for H3AN71 as seed ortholog is 100%.
Bootstrap support for D3AZM1 as seed ortholog is 100%.

Group of orthologs #252. Best score 553 bits
Score difference with first non-orthologous sequence - L.chalumnae:553 P.pallidum:263

H3BIM2              	100.00%		D3BHQ7              	100.00%
Bootstrap support for H3BIM2 as seed ortholog is 100%.
Bootstrap support for D3BHQ7 as seed ortholog is 100%.

Group of orthologs #253. Best score 551 bits
Score difference with first non-orthologous sequence - L.chalumnae:551 P.pallidum:386

H3ADZ0              	100.00%		D3BRT1              	100.00%
Bootstrap support for H3ADZ0 as seed ortholog is 100%.
Bootstrap support for D3BRT1 as seed ortholog is 100%.

Group of orthologs #254. Best score 550 bits
Score difference with first non-orthologous sequence - L.chalumnae:550 P.pallidum:550

H3B7T9              	100.00%		D3AXX5              	100.00%
H3AVD0              	59.95%		
Bootstrap support for H3B7T9 as seed ortholog is 100%.
Bootstrap support for D3AXX5 as seed ortholog is 100%.

Group of orthologs #255. Best score 550 bits
Score difference with first non-orthologous sequence - L.chalumnae:550 P.pallidum:315

H3B5L6              	100.00%		D3BBF7              	100.00%
Bootstrap support for H3B5L6 as seed ortholog is 100%.
Bootstrap support for D3BBF7 as seed ortholog is 100%.

Group of orthologs #256. Best score 549 bits
Score difference with first non-orthologous sequence - L.chalumnae:549 P.pallidum:549

M3XH91              	100.00%		D3B7E5              	100.00%
H3BAS1              	70.35%		
H3BE04              	69.31%		
H3BH26              	66.19%		
Bootstrap support for M3XH91 as seed ortholog is 100%.
Bootstrap support for D3B7E5 as seed ortholog is 100%.

Group of orthologs #257. Best score 549 bits
Score difference with first non-orthologous sequence - L.chalumnae:549 P.pallidum:499

H3BBC2              	100.00%		D3BE82              	100.00%
Bootstrap support for H3BBC2 as seed ortholog is 100%.
Bootstrap support for D3BE82 as seed ortholog is 100%.

Group of orthologs #258. Best score 547 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.pallidum:265

H3B6N4              	100.00%		D3BBY9              	100.00%
H3ALX3              	44.00%		
H3AR00              	36.00%		
H3AMP2              	34.40%		
Bootstrap support for H3B6N4 as seed ortholog is 99%.
Bootstrap support for D3BBY9 as seed ortholog is 100%.

Group of orthologs #259. Best score 547 bits
Score difference with first non-orthologous sequence - L.chalumnae:547 P.pallidum:547

H3AKL3              	100.00%		D3BAW3              	100.00%
                    	       		D3B6E9              	51.70%
Bootstrap support for H3AKL3 as seed ortholog is 100%.
Bootstrap support for D3BAW3 as seed ortholog is 100%.

Group of orthologs #260. Best score 547 bits
Score difference with first non-orthologous sequence - L.chalumnae:170 P.pallidum:437

H3AXE7              	100.00%		D3B7D2              	100.00%
Bootstrap support for H3AXE7 as seed ortholog is 99%.
Bootstrap support for D3B7D2 as seed ortholog is 100%.

Group of orthologs #261. Best score 546 bits
Score difference with first non-orthologous sequence - L.chalumnae:546 P.pallidum:546

H3AB34              	100.00%		D3BQX1              	100.00%
Bootstrap support for H3AB34 as seed ortholog is 100%.
Bootstrap support for D3BQX1 as seed ortholog is 100%.

Group of orthologs #262. Best score 545 bits
Score difference with first non-orthologous sequence - L.chalumnae:545 P.pallidum:545

H3B8M2              	100.00%		D3BPC8              	100.00%
Bootstrap support for H3B8M2 as seed ortholog is 100%.
Bootstrap support for D3BPC8 as seed ortholog is 100%.

Group of orthologs #263. Best score 543 bits
Score difference with first non-orthologous sequence - L.chalumnae:543 P.pallidum:543

H3A1H0              	100.00%		D3BQ18              	100.00%
Bootstrap support for H3A1H0 as seed ortholog is 100%.
Bootstrap support for D3BQ18 as seed ortholog is 100%.

Group of orthologs #264. Best score 541 bits
Score difference with first non-orthologous sequence - L.chalumnae:70 P.pallidum:188

H2ZVT3              	100.00%		D3B4W2              	100.00%
Bootstrap support for H2ZVT3 as seed ortholog is 87%.
Bootstrap support for D3B4W2 as seed ortholog is 99%.

Group of orthologs #265. Best score 540 bits
Score difference with first non-orthologous sequence - L.chalumnae:540 P.pallidum:318

H3A5W6              	100.00%		D3AXU9              	100.00%
H3A6A5              	36.96%		
H3AQR5              	29.38%		
Bootstrap support for H3A5W6 as seed ortholog is 100%.
Bootstrap support for D3AXU9 as seed ortholog is 100%.

Group of orthologs #266. Best score 538 bits
Score difference with first non-orthologous sequence - L.chalumnae:538 P.pallidum:538

H3BII8              	100.00%		D3BUR5              	100.00%
                    	       		D3B2S5              	25.71%
Bootstrap support for H3BII8 as seed ortholog is 100%.
Bootstrap support for D3BUR5 as seed ortholog is 100%.

Group of orthologs #267. Best score 537 bits
Score difference with first non-orthologous sequence - L.chalumnae:537 P.pallidum:537

H3AB29              	100.00%		D3BJH7              	100.00%
Bootstrap support for H3AB29 as seed ortholog is 100%.
Bootstrap support for D3BJH7 as seed ortholog is 100%.

Group of orthologs #268. Best score 537 bits
Score difference with first non-orthologous sequence - L.chalumnae:537 P.pallidum:537

H3AIE7              	100.00%		D3BP61              	100.00%
Bootstrap support for H3AIE7 as seed ortholog is 100%.
Bootstrap support for D3BP61 as seed ortholog is 100%.

Group of orthologs #269. Best score 536 bits
Score difference with first non-orthologous sequence - L.chalumnae:536 P.pallidum:536

H3BBQ3              	100.00%		D3AVV8              	100.00%
H3B0F5              	45.65%		
H3AYA8              	16.58%		
Bootstrap support for H3BBQ3 as seed ortholog is 100%.
Bootstrap support for D3AVV8 as seed ortholog is 100%.

Group of orthologs #270. Best score 536 bits
Score difference with first non-orthologous sequence - L.chalumnae:536 P.pallidum:536

H2ZVC0              	100.00%		D3BKG1              	100.00%
Bootstrap support for H2ZVC0 as seed ortholog is 100%.
Bootstrap support for D3BKG1 as seed ortholog is 100%.

Group of orthologs #271. Best score 536 bits
Score difference with first non-orthologous sequence - L.chalumnae:201 P.pallidum:365

H3B1B6              	100.00%		D3BK58              	100.00%
Bootstrap support for H3B1B6 as seed ortholog is 100%.
Bootstrap support for D3BK58 as seed ortholog is 100%.

Group of orthologs #272. Best score 536 bits
Score difference with first non-orthologous sequence - L.chalumnae:536 P.pallidum:536

H3BHM8              	100.00%		D3BR60              	100.00%
Bootstrap support for H3BHM8 as seed ortholog is 100%.
Bootstrap support for D3BR60 as seed ortholog is 100%.

Group of orthologs #273. Best score 535 bits
Score difference with first non-orthologous sequence - L.chalumnae:535 P.pallidum:535

H3A0G7              	100.00%		D3B7L4              	100.00%
Bootstrap support for H3A0G7 as seed ortholog is 100%.
Bootstrap support for D3B7L4 as seed ortholog is 100%.

Group of orthologs #274. Best score 535 bits
Score difference with first non-orthologous sequence - L.chalumnae:535 P.pallidum:535

H3AK48              	100.00%		D3B625              	100.00%
Bootstrap support for H3AK48 as seed ortholog is 100%.
Bootstrap support for D3B625 as seed ortholog is 100%.

Group of orthologs #275. Best score 534 bits
Score difference with first non-orthologous sequence - L.chalumnae:534 P.pallidum:534

H3A4A1              	100.00%		D3BEX0              	100.00%
Bootstrap support for H3A4A1 as seed ortholog is 100%.
Bootstrap support for D3BEX0 as seed ortholog is 100%.

Group of orthologs #276. Best score 533 bits
Score difference with first non-orthologous sequence - L.chalumnae:533 P.pallidum:533

H3A6J3              	100.00%		D3BPJ2              	100.00%
H3A2M7              	48.86%		
Bootstrap support for H3A6J3 as seed ortholog is 100%.
Bootstrap support for D3BPJ2 as seed ortholog is 100%.

Group of orthologs #277. Best score 533 bits
Score difference with first non-orthologous sequence - L.chalumnae:374 P.pallidum:533

H3B2F0              	100.00%		D3BKQ8              	100.00%
Bootstrap support for H3B2F0 as seed ortholog is 100%.
Bootstrap support for D3BKQ8 as seed ortholog is 100%.

Group of orthologs #278. Best score 532 bits
Score difference with first non-orthologous sequence - L.chalumnae:532 P.pallidum:532

H2ZU31              	100.00%		D3BPW9              	100.00%
Bootstrap support for H2ZU31 as seed ortholog is 100%.
Bootstrap support for D3BPW9 as seed ortholog is 100%.

Group of orthologs #279. Best score 532 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 P.pallidum:124

H3B9W8              	100.00%		D3AYB4              	100.00%
Bootstrap support for H3B9W8 as seed ortholog is 99%.
Bootstrap support for D3AYB4 as seed ortholog is 99%.

Group of orthologs #280. Best score 531 bits
Score difference with first non-orthologous sequence - L.chalumnae:222 P.pallidum:531

H3B7A9              	100.00%		D3BR06              	100.00%
Bootstrap support for H3B7A9 as seed ortholog is 99%.
Bootstrap support for D3BR06 as seed ortholog is 100%.

Group of orthologs #281. Best score 530 bits
Score difference with first non-orthologous sequence - L.chalumnae:530 P.pallidum:530

H3ASK0              	100.00%		D3B8W3              	100.00%
Bootstrap support for H3ASK0 as seed ortholog is 100%.
Bootstrap support for D3B8W3 as seed ortholog is 100%.

Group of orthologs #282. Best score 530 bits
Score difference with first non-orthologous sequence - L.chalumnae:530 P.pallidum:444

H3BBS2              	100.00%		D3BC91              	100.00%
Bootstrap support for H3BBS2 as seed ortholog is 100%.
Bootstrap support for D3BC91 as seed ortholog is 100%.

Group of orthologs #283. Best score 530 bits
Score difference with first non-orthologous sequence - L.chalumnae:530 P.pallidum:530

H3BDN1              	100.00%		D3BPD1              	100.00%
Bootstrap support for H3BDN1 as seed ortholog is 100%.
Bootstrap support for D3BPD1 as seed ortholog is 100%.

Group of orthologs #284. Best score 529 bits
Score difference with first non-orthologous sequence - L.chalumnae:529 P.pallidum:529

H3AYK6              	100.00%		D3BGD9              	100.00%
Bootstrap support for H3AYK6 as seed ortholog is 100%.
Bootstrap support for D3BGD9 as seed ortholog is 100%.

Group of orthologs #285. Best score 529 bits
Score difference with first non-orthologous sequence - L.chalumnae:529 P.pallidum:529

H3AXJ1              	100.00%		D3BLY9              	100.00%
Bootstrap support for H3AXJ1 as seed ortholog is 100%.
Bootstrap support for D3BLY9 as seed ortholog is 100%.

Group of orthologs #286. Best score 528 bits
Score difference with first non-orthologous sequence - L.chalumnae:528 P.pallidum:528

H3B595              	100.00%		D3B6E7              	100.00%
Bootstrap support for H3B595 as seed ortholog is 100%.
Bootstrap support for D3B6E7 as seed ortholog is 100%.

Group of orthologs #287. Best score 527 bits
Score difference with first non-orthologous sequence - L.chalumnae:465 P.pallidum:418

H3BBH3              	100.00%		D3BT28              	100.00%
Bootstrap support for H3BBH3 as seed ortholog is 100%.
Bootstrap support for D3BT28 as seed ortholog is 100%.

Group of orthologs #288. Best score 526 bits
Score difference with first non-orthologous sequence - L.chalumnae:309 P.pallidum:526

H3BED7              	100.00%		D3BF55              	100.00%
H3BFI3              	47.98%		
H3A4M1              	42.15%		
H3BG45              	23.02%		
Bootstrap support for H3BED7 as seed ortholog is 100%.
Bootstrap support for D3BF55 as seed ortholog is 100%.

Group of orthologs #289. Best score 524 bits
Score difference with first non-orthologous sequence - L.chalumnae:355 P.pallidum:401

H3A660              	100.00%		D3B3C8              	100.00%
Bootstrap support for H3A660 as seed ortholog is 100%.
Bootstrap support for D3B3C8 as seed ortholog is 100%.

Group of orthologs #290. Best score 523 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 P.pallidum:124

H3AZ97              	100.00%		D3AYR9              	100.00%
H3AKC6              	27.56%		
H3B6T5              	10.72%		
H3AV31              	7.45%		
Bootstrap support for H3AZ97 as seed ortholog is 83%.
Bootstrap support for D3AYR9 as seed ortholog is 98%.

Group of orthologs #291. Best score 523 bits
Score difference with first non-orthologous sequence - L.chalumnae:523 P.pallidum:409

H3AUY3              	100.00%		D3B0D7              	100.00%
Bootstrap support for H3AUY3 as seed ortholog is 100%.
Bootstrap support for D3B0D7 as seed ortholog is 100%.

Group of orthologs #292. Best score 522 bits
Score difference with first non-orthologous sequence - L.chalumnae:425 P.pallidum:221

H3AQW1              	100.00%		D3AYX0              	100.00%
Bootstrap support for H3AQW1 as seed ortholog is 100%.
Bootstrap support for D3AYX0 as seed ortholog is 99%.

Group of orthologs #293. Best score 520 bits
Score difference with first non-orthologous sequence - L.chalumnae:520 P.pallidum:213

H3AV53              	100.00%		D3AVQ3              	100.00%
H3A5M3              	62.22%		
H3AA31              	44.06%		
Bootstrap support for H3AV53 as seed ortholog is 100%.
Bootstrap support for D3AVQ3 as seed ortholog is 100%.

Group of orthologs #294. Best score 520 bits
Score difference with first non-orthologous sequence - L.chalumnae:520 P.pallidum:520

H3A0F5              	100.00%		D3B3T8              	100.00%
Bootstrap support for H3A0F5 as seed ortholog is 100%.
Bootstrap support for D3B3T8 as seed ortholog is 100%.

Group of orthologs #295. Best score 519 bits
Score difference with first non-orthologous sequence - L.chalumnae:348 P.pallidum:269

H3AK78              	100.00%		D3AZ75              	100.00%
H2ZS69              	53.50%		
Bootstrap support for H3AK78 as seed ortholog is 100%.
Bootstrap support for D3AZ75 as seed ortholog is 100%.

Group of orthologs #296. Best score 519 bits
Score difference with first non-orthologous sequence - L.chalumnae:171 P.pallidum:519

H3AND9              	100.00%		D3B0J2              	100.00%
H3ATZ2              	13.26%		
Bootstrap support for H3AND9 as seed ortholog is 99%.
Bootstrap support for D3B0J2 as seed ortholog is 100%.

Group of orthologs #297. Best score 519 bits
Score difference with first non-orthologous sequence - L.chalumnae:278 P.pallidum:369

H3B5C3              	100.00%		D3BNB9              	100.00%
H2ZY90              	56.88%		
Bootstrap support for H3B5C3 as seed ortholog is 100%.
Bootstrap support for D3BNB9 as seed ortholog is 100%.

Group of orthologs #298. Best score 517 bits
Score difference with first non-orthologous sequence - L.chalumnae:517 P.pallidum:382

H3A6D2              	100.00%		D3BNW4              	100.00%
Bootstrap support for H3A6D2 as seed ortholog is 100%.
Bootstrap support for D3BNW4 as seed ortholog is 100%.

Group of orthologs #299. Best score 517 bits
Score difference with first non-orthologous sequence - L.chalumnae:517 P.pallidum:166

H3AHD4              	100.00%		D3BMW0              	100.00%
Bootstrap support for H3AHD4 as seed ortholog is 100%.
Bootstrap support for D3BMW0 as seed ortholog is 99%.

Group of orthologs #300. Best score 517 bits
Score difference with first non-orthologous sequence - L.chalumnae:517 P.pallidum:517

M3XKB5              	100.00%		D3BB96              	100.00%
Bootstrap support for M3XKB5 as seed ortholog is 100%.
Bootstrap support for D3BB96 as seed ortholog is 100%.

Group of orthologs #301. Best score 516 bits
Score difference with first non-orthologous sequence - L.chalumnae:516 P.pallidum:516

H3AIE9              	100.00%		D3BEC2              	100.00%
Bootstrap support for H3AIE9 as seed ortholog is 100%.
Bootstrap support for D3BEC2 as seed ortholog is 100%.

Group of orthologs #302. Best score 515 bits
Score difference with first non-orthologous sequence - L.chalumnae:515 P.pallidum:515

H3A8T1              	100.00%		D3BUT9              	100.00%
H3BFX4              	35.17%		
Bootstrap support for H3A8T1 as seed ortholog is 100%.
Bootstrap support for D3BUT9 as seed ortholog is 100%.

Group of orthologs #303. Best score 514 bits
Score difference with first non-orthologous sequence - L.chalumnae:514 P.pallidum:514

H3A1S5              	100.00%		D3AZP8              	100.00%
Bootstrap support for H3A1S5 as seed ortholog is 100%.
Bootstrap support for D3AZP8 as seed ortholog is 100%.

Group of orthologs #304. Best score 514 bits
Score difference with first non-orthologous sequence - L.chalumnae:514 P.pallidum:514

H3ATV4              	100.00%		D3B0H1              	100.00%
Bootstrap support for H3ATV4 as seed ortholog is 100%.
Bootstrap support for D3B0H1 as seed ortholog is 100%.

Group of orthologs #305. Best score 513 bits
Score difference with first non-orthologous sequence - L.chalumnae:448 P.pallidum:513

H2ZY34              	100.00%		D3BA44              	100.00%
Bootstrap support for H2ZY34 as seed ortholog is 100%.
Bootstrap support for D3BA44 as seed ortholog is 100%.

Group of orthologs #306. Best score 512 bits
Score difference with first non-orthologous sequence - L.chalumnae:512 P.pallidum:359

H3A217              	100.00%		D3B9H0              	100.00%
Bootstrap support for H3A217 as seed ortholog is 100%.
Bootstrap support for D3B9H0 as seed ortholog is 100%.

Group of orthologs #307. Best score 512 bits
Score difference with first non-orthologous sequence - L.chalumnae:512 P.pallidum:512

H3A050              	100.00%		D3BB47              	100.00%
Bootstrap support for H3A050 as seed ortholog is 100%.
Bootstrap support for D3BB47 as seed ortholog is 100%.

Group of orthologs #308. Best score 512 bits
Score difference with first non-orthologous sequence - L.chalumnae:512 P.pallidum:512

H3ATB4              	100.00%		D3BV41              	100.00%
Bootstrap support for H3ATB4 as seed ortholog is 100%.
Bootstrap support for D3BV41 as seed ortholog is 100%.

Group of orthologs #309. Best score 512 bits
Score difference with first non-orthologous sequence - L.chalumnae:512 P.pallidum:512

H3B5H5              	100.00%		D3BMS6              	100.00%
Bootstrap support for H3B5H5 as seed ortholog is 100%.
Bootstrap support for D3BMS6 as seed ortholog is 100%.

Group of orthologs #310. Best score 511 bits
Score difference with first non-orthologous sequence - L.chalumnae:100 P.pallidum:133

H3ASY1              	100.00%		D3AZ87              	100.00%
H3ASS5              	54.73%		
H3A826              	52.15%		
Bootstrap support for H3ASY1 as seed ortholog is 98%.
Bootstrap support for D3AZ87 as seed ortholog is 99%.

Group of orthologs #311. Best score 509 bits
Score difference with first non-orthologous sequence - L.chalumnae:385 P.pallidum:509

H3AXJ9              	100.00%		D3BAC0              	100.00%
Bootstrap support for H3AXJ9 as seed ortholog is 100%.
Bootstrap support for D3BAC0 as seed ortholog is 100%.

Group of orthologs #312. Best score 508 bits
Score difference with first non-orthologous sequence - L.chalumnae:508 P.pallidum:508

H2ZW85              	100.00%		D3AY16              	100.00%
Bootstrap support for H2ZW85 as seed ortholog is 100%.
Bootstrap support for D3AY16 as seed ortholog is 100%.

Group of orthologs #313. Best score 508 bits
Score difference with first non-orthologous sequence - L.chalumnae:217 P.pallidum:363

H3BDT7              	100.00%		D3BJP0              	100.00%
Bootstrap support for H3BDT7 as seed ortholog is 100%.
Bootstrap support for D3BJP0 as seed ortholog is 100%.

Group of orthologs #314. Best score 507 bits
Score difference with first non-orthologous sequence - L.chalumnae:233 P.pallidum:329

H3A1W8              	100.00%		D3BMB3              	100.00%
H3BEF1              	65.44%		
H3A6E9              	64.77%		
H2ZRV2              	10.74%		
Bootstrap support for H3A1W8 as seed ortholog is 100%.
Bootstrap support for D3BMB3 as seed ortholog is 100%.

Group of orthologs #315. Best score 505 bits
Score difference with first non-orthologous sequence - L.chalumnae:505 P.pallidum:383

H3AV68              	100.00%		D3BIX8              	100.00%
H3A368              	31.63%		
H3AWA4              	19.07%		
Bootstrap support for H3AV68 as seed ortholog is 100%.
Bootstrap support for D3BIX8 as seed ortholog is 100%.

Group of orthologs #316. Best score 504 bits
Score difference with first non-orthologous sequence - L.chalumnae:504 P.pallidum:211

H3ANZ0              	100.00%		D3BEH3              	100.00%
Bootstrap support for H3ANZ0 as seed ortholog is 100%.
Bootstrap support for D3BEH3 as seed ortholog is 99%.

Group of orthologs #317. Best score 503 bits
Score difference with first non-orthologous sequence - L.chalumnae:503 P.pallidum:503

H3AZF0              	100.00%		D3BQC3              	100.00%
Bootstrap support for H3AZF0 as seed ortholog is 100%.
Bootstrap support for D3BQC3 as seed ortholog is 100%.

Group of orthologs #318. Best score 502 bits
Score difference with first non-orthologous sequence - L.chalumnae:225 P.pallidum:502

H3AC80              	100.00%		D3BBC2              	100.00%
H3B6C9              	12.48%		
Bootstrap support for H3AC80 as seed ortholog is 99%.
Bootstrap support for D3BBC2 as seed ortholog is 100%.

Group of orthologs #319. Best score 501 bits
Score difference with first non-orthologous sequence - L.chalumnae:501 P.pallidum:501

H2ZRP6              	100.00%		D3B268              	100.00%
Bootstrap support for H2ZRP6 as seed ortholog is 100%.
Bootstrap support for D3B268 as seed ortholog is 100%.

Group of orthologs #320. Best score 501 bits
Score difference with first non-orthologous sequence - L.chalumnae:501 P.pallidum:233

H3ARW8              	100.00%		D3BE65              	100.00%
Bootstrap support for H3ARW8 as seed ortholog is 100%.
Bootstrap support for D3BE65 as seed ortholog is 84%.

Group of orthologs #321. Best score 501 bits
Score difference with first non-orthologous sequence - L.chalumnae:501 P.pallidum:501

H3BEP0              	100.00%		D3BBV3              	100.00%
Bootstrap support for H3BEP0 as seed ortholog is 100%.
Bootstrap support for D3BBV3 as seed ortholog is 100%.

Group of orthologs #322. Best score 500 bits
Score difference with first non-orthologous sequence - L.chalumnae:223 P.pallidum:136

H3ACR9              	100.00%		D3BB29              	100.00%
H3B5A9              	21.92%		
Bootstrap support for H3ACR9 as seed ortholog is 100%.
Bootstrap support for D3BB29 as seed ortholog is 99%.

Group of orthologs #323. Best score 500 bits
Score difference with first non-orthologous sequence - L.chalumnae:500 P.pallidum:500

H3B4S4              	100.00%		D3AY91              	100.00%
Bootstrap support for H3B4S4 as seed ortholog is 100%.
Bootstrap support for D3AY91 as seed ortholog is 100%.

Group of orthologs #324. Best score 500 bits
Score difference with first non-orthologous sequence - L.chalumnae:208 P.pallidum:108

H3BFY5              	100.00%		D3B2M8              	100.00%
Bootstrap support for H3BFY5 as seed ortholog is 100%.
Bootstrap support for D3B2M8 as seed ortholog is 99%.

Group of orthologs #325. Best score 498 bits
Score difference with first non-orthologous sequence - L.chalumnae:498 P.pallidum:498

H3AI66              	100.00%		D3BF15              	100.00%
Bootstrap support for H3AI66 as seed ortholog is 100%.
Bootstrap support for D3BF15 as seed ortholog is 100%.

Group of orthologs #326. Best score 496 bits
Score difference with first non-orthologous sequence - L.chalumnae:496 P.pallidum:496

H3A5T5              	100.00%		D3B6P0              	100.00%
Bootstrap support for H3A5T5 as seed ortholog is 100%.
Bootstrap support for D3B6P0 as seed ortholog is 100%.

Group of orthologs #327. Best score 495 bits
Score difference with first non-orthologous sequence - L.chalumnae:495 P.pallidum:495

H3ABQ3              	100.00%		D3BK20              	100.00%
H3AXY9              	43.79%		
Bootstrap support for H3ABQ3 as seed ortholog is 100%.
Bootstrap support for D3BK20 as seed ortholog is 100%.

Group of orthologs #328. Best score 495 bits
Score difference with first non-orthologous sequence - L.chalumnae:495 P.pallidum:495

H3A703              	100.00%		D3BCL5              	100.00%
Bootstrap support for H3A703 as seed ortholog is 100%.
Bootstrap support for D3BCL5 as seed ortholog is 100%.

Group of orthologs #329. Best score 495 bits
Score difference with first non-orthologous sequence - L.chalumnae:495 P.pallidum:495

H3AHL0              	100.00%		D3B6X9              	100.00%
Bootstrap support for H3AHL0 as seed ortholog is 100%.
Bootstrap support for D3B6X9 as seed ortholog is 100%.

Group of orthologs #330. Best score 494 bits
Score difference with first non-orthologous sequence - L.chalumnae:443 P.pallidum:494

H3ASB1              	100.00%		D3AZB0              	100.00%
Bootstrap support for H3ASB1 as seed ortholog is 100%.
Bootstrap support for D3AZB0 as seed ortholog is 100%.

Group of orthologs #331. Best score 494 bits
Score difference with first non-orthologous sequence - L.chalumnae:494 P.pallidum:494

H3BFU0              	100.00%		D3B1P9              	100.00%
Bootstrap support for H3BFU0 as seed ortholog is 100%.
Bootstrap support for D3B1P9 as seed ortholog is 100%.

Group of orthologs #332. Best score 494 bits
Score difference with first non-orthologous sequence - L.chalumnae:494 P.pallidum:376

H3BI66              	100.00%		D3B4P1              	100.00%
Bootstrap support for H3BI66 as seed ortholog is 100%.
Bootstrap support for D3B4P1 as seed ortholog is 100%.

Group of orthologs #333. Best score 493 bits
Score difference with first non-orthologous sequence - L.chalumnae:493 P.pallidum:367

H3AF78              	100.00%		D3B2K0              	100.00%
H3A6Y2              	13.68%		
Bootstrap support for H3AF78 as seed ortholog is 100%.
Bootstrap support for D3B2K0 as seed ortholog is 100%.

Group of orthologs #334. Best score 493 bits
Score difference with first non-orthologous sequence - L.chalumnae:493 P.pallidum:493

H3B0T2              	100.00%		D3B718              	100.00%
Bootstrap support for H3B0T2 as seed ortholog is 100%.
Bootstrap support for D3B718 as seed ortholog is 100%.

Group of orthologs #335. Best score 492 bits
Score difference with first non-orthologous sequence - L.chalumnae:492 P.pallidum:97

H3AXY1              	100.00%		D3B105              	100.00%
Bootstrap support for H3AXY1 as seed ortholog is 100%.
Bootstrap support for D3B105 as seed ortholog is 95%.

Group of orthologs #336. Best score 491 bits
Score difference with first non-orthologous sequence - L.chalumnae:73 P.pallidum:253

M3XGL4              	100.00%		D3BRC2              	100.00%
H3ATS6              	50.27%		
H3BEP7              	41.65%		
H3AUS8              	33.21%		
Bootstrap support for M3XGL4 as seed ortholog is 96%.
Bootstrap support for D3BRC2 as seed ortholog is 100%.

Group of orthologs #337. Best score 490 bits
Score difference with first non-orthologous sequence - L.chalumnae:490 P.pallidum:490

H3AKW1              	100.00%		D3B2T4              	100.00%
Bootstrap support for H3AKW1 as seed ortholog is 100%.
Bootstrap support for D3B2T4 as seed ortholog is 100%.

Group of orthologs #338. Best score 490 bits
Score difference with first non-orthologous sequence - L.chalumnae:175 P.pallidum:370

H3A8B9              	100.00%		D3BNV2              	100.00%
Bootstrap support for H3A8B9 as seed ortholog is 100%.
Bootstrap support for D3BNV2 as seed ortholog is 100%.

Group of orthologs #339. Best score 488 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 P.pallidum:419

H3BIP7              	100.00%		D3BQ34              	100.00%
H3B4Y1              	11.52%		
Bootstrap support for H3BIP7 as seed ortholog is 99%.
Bootstrap support for D3BQ34 as seed ortholog is 100%.

Group of orthologs #340. Best score 488 bits
Score difference with first non-orthologous sequence - L.chalumnae:488 P.pallidum:488

H2ZYJ0              	100.00%		D3AYN6              	100.00%
Bootstrap support for H2ZYJ0 as seed ortholog is 100%.
Bootstrap support for D3AYN6 as seed ortholog is 100%.

Group of orthologs #341. Best score 487 bits
Score difference with first non-orthologous sequence - L.chalumnae:487 P.pallidum:487

H3AQ68              	100.00%		D3BDV7              	100.00%
H2ZZV8              	50.09%		
Bootstrap support for H3AQ68 as seed ortholog is 100%.
Bootstrap support for D3BDV7 as seed ortholog is 100%.

Group of orthologs #342. Best score 485 bits
Score difference with first non-orthologous sequence - L.chalumnae:238 P.pallidum:291

H3BA91              	100.00%		D3AVW9              	100.00%
H3APY0              	47.68%		
Bootstrap support for H3BA91 as seed ortholog is 99%.
Bootstrap support for D3AVW9 as seed ortholog is 100%.

Group of orthologs #343. Best score 485 bits
Score difference with first non-orthologous sequence - L.chalumnae:485 P.pallidum:485

H3ASP8              	100.00%		D3AXR9              	100.00%
Bootstrap support for H3ASP8 as seed ortholog is 100%.
Bootstrap support for D3AXR9 as seed ortholog is 100%.

Group of orthologs #344. Best score 485 bits
Score difference with first non-orthologous sequence - L.chalumnae:271 P.pallidum:285

H3AGK3              	100.00%		D3BSG3              	100.00%
Bootstrap support for H3AGK3 as seed ortholog is 100%.
Bootstrap support for D3BSG3 as seed ortholog is 100%.

Group of orthologs #345. Best score 484 bits
Score difference with first non-orthologous sequence - L.chalumnae:484 P.pallidum:484

H3AD44              	100.00%		D3AXG3              	100.00%
H3A5R2              	65.14%		
Bootstrap support for H3AD44 as seed ortholog is 100%.
Bootstrap support for D3AXG3 as seed ortholog is 100%.

Group of orthologs #346. Best score 484 bits
Score difference with first non-orthologous sequence - L.chalumnae:484 P.pallidum:484

H3AYH7              	100.00%		D3B7Y2              	100.00%
Bootstrap support for H3AYH7 as seed ortholog is 100%.
Bootstrap support for D3B7Y2 as seed ortholog is 100%.

Group of orthologs #347. Best score 484 bits
Score difference with first non-orthologous sequence - L.chalumnae:484 P.pallidum:484

M3XJ87              	100.00%		D3BFF8              	100.00%
Bootstrap support for M3XJ87 as seed ortholog is 100%.
Bootstrap support for D3BFF8 as seed ortholog is 100%.

Group of orthologs #348. Best score 481 bits
Score difference with first non-orthologous sequence - L.chalumnae:481 P.pallidum:481

H2ZTY7              	100.00%		D3BBM5              	100.00%
Bootstrap support for H2ZTY7 as seed ortholog is 100%.
Bootstrap support for D3BBM5 as seed ortholog is 100%.

Group of orthologs #349. Best score 481 bits
Score difference with first non-orthologous sequence - L.chalumnae:323 P.pallidum:481

H3AUY2              	100.00%		D3BGP9              	100.00%
Bootstrap support for H3AUY2 as seed ortholog is 100%.
Bootstrap support for D3BGP9 as seed ortholog is 100%.

Group of orthologs #350. Best score 480 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 P.pallidum:480

H3BBA5              	100.00%		D3BG27              	100.00%
H3BHF5              	10.35%		
H3ARF7              	6.70%		
Bootstrap support for H3BBA5 as seed ortholog is 99%.
Bootstrap support for D3BG27 as seed ortholog is 100%.

Group of orthologs #351. Best score 480 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.pallidum:480

H3A0I9              	100.00%		D3AW74              	100.00%
Bootstrap support for H3A0I9 as seed ortholog is 96%.
Bootstrap support for D3AW74 as seed ortholog is 100%.

Group of orthologs #352. Best score 480 bits
Score difference with first non-orthologous sequence - L.chalumnae:399 P.pallidum:480

H3B4Y2              	100.00%		D3B0Z8              	100.00%
Bootstrap support for H3B4Y2 as seed ortholog is 100%.
Bootstrap support for D3B0Z8 as seed ortholog is 100%.

Group of orthologs #353. Best score 480 bits
Score difference with first non-orthologous sequence - L.chalumnae:154 P.pallidum:265

H3BAW4              	100.00%		D3BRA7              	100.00%
Bootstrap support for H3BAW4 as seed ortholog is 99%.
Bootstrap support for D3BRA7 as seed ortholog is 100%.

Group of orthologs #354. Best score 479 bits
Score difference with first non-orthologous sequence - L.chalumnae:288 P.pallidum:346

H3B6Y3              	100.00%		D3B9E0              	100.00%
Bootstrap support for H3B6Y3 as seed ortholog is 100%.
Bootstrap support for D3B9E0 as seed ortholog is 100%.

Group of orthologs #355. Best score 478 bits
Score difference with first non-orthologous sequence - L.chalumnae:478 P.pallidum:374

H2ZTG7              	100.00%		D3BGA4              	100.00%
Bootstrap support for H2ZTG7 as seed ortholog is 100%.
Bootstrap support for D3BGA4 as seed ortholog is 100%.

Group of orthologs #356. Best score 478 bits
Score difference with first non-orthologous sequence - L.chalumnae:478 P.pallidum:478

H3AJ55              	100.00%		D3B7I3              	100.00%
Bootstrap support for H3AJ55 as seed ortholog is 100%.
Bootstrap support for D3B7I3 as seed ortholog is 100%.

Group of orthologs #357. Best score 478 bits
Score difference with first non-orthologous sequence - L.chalumnae:253 P.pallidum:259

H3AU41              	100.00%		D3B6C6              	100.00%
Bootstrap support for H3AU41 as seed ortholog is 100%.
Bootstrap support for D3B6C6 as seed ortholog is 100%.

Group of orthologs #358. Best score 478 bits
Score difference with first non-orthologous sequence - L.chalumnae:478 P.pallidum:478

H3BID1              	100.00%		D3B6W0              	100.00%
Bootstrap support for H3BID1 as seed ortholog is 100%.
Bootstrap support for D3B6W0 as seed ortholog is 100%.

Group of orthologs #359. Best score 477 bits
Score difference with first non-orthologous sequence - L.chalumnae:477 P.pallidum:477

H3BDM0              	100.00%		D3B002              	100.00%
H3BAQ7              	42.45%		
H3AQQ5              	20.23%		
H3BC70              	9.38%		
Bootstrap support for H3BDM0 as seed ortholog is 100%.
Bootstrap support for D3B002 as seed ortholog is 100%.

Group of orthologs #360. Best score 477 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 P.pallidum:251

H3A6M8              	100.00%		D3BCI5              	100.00%
Bootstrap support for H3A6M8 as seed ortholog is 93%.
Bootstrap support for D3BCI5 as seed ortholog is 100%.

Group of orthologs #361. Best score 475 bits
Score difference with first non-orthologous sequence - L.chalumnae:475 P.pallidum:340

H3AWT5              	100.00%		D3BV42              	100.00%
H3AUA8              	28.06%		D3B157              	18.33%
H3B0G9              	20.60%		
Bootstrap support for H3AWT5 as seed ortholog is 100%.
Bootstrap support for D3BV42 as seed ortholog is 99%.

Group of orthologs #362. Best score 474 bits
Score difference with first non-orthologous sequence - L.chalumnae:474 P.pallidum:300

H3A2T5              	100.00%		D3B4I1              	100.00%
Bootstrap support for H3A2T5 as seed ortholog is 100%.
Bootstrap support for D3B4I1 as seed ortholog is 100%.

Group of orthologs #363. Best score 474 bits
Score difference with first non-orthologous sequence - L.chalumnae:27 P.pallidum:474

H3AUQ8              	100.00%		D3BKZ8              	100.00%
Bootstrap support for H3AUQ8 as seed ortholog is 79%.
Bootstrap support for D3BKZ8 as seed ortholog is 100%.

Group of orthologs #364. Best score 473 bits
Score difference with first non-orthologous sequence - L.chalumnae:473 P.pallidum:473

H3API7              	100.00%		D3BBU3              	100.00%
Bootstrap support for H3API7 as seed ortholog is 100%.
Bootstrap support for D3BBU3 as seed ortholog is 100%.

Group of orthologs #365. Best score 472 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 P.pallidum:472

M3XKS9              	100.00%		D3AVT5              	100.00%
Bootstrap support for M3XKS9 as seed ortholog is 99%.
Bootstrap support for D3AVT5 as seed ortholog is 100%.

Group of orthologs #366. Best score 470 bits
Score difference with first non-orthologous sequence - L.chalumnae:470 P.pallidum:470

H3AD65              	100.00%		D3B061              	100.00%
Bootstrap support for H3AD65 as seed ortholog is 100%.
Bootstrap support for D3B061 as seed ortholog is 100%.

Group of orthologs #367. Best score 470 bits
Score difference with first non-orthologous sequence - L.chalumnae:470 P.pallidum:198

H3A7U1              	100.00%		D3B7W6              	100.00%
Bootstrap support for H3A7U1 as seed ortholog is 100%.
Bootstrap support for D3B7W6 as seed ortholog is 99%.

Group of orthologs #368. Best score 470 bits
Score difference with first non-orthologous sequence - L.chalumnae:470 P.pallidum:386

H3ASM4              	100.00%		D3BFW7              	100.00%
Bootstrap support for H3ASM4 as seed ortholog is 100%.
Bootstrap support for D3BFW7 as seed ortholog is 100%.

Group of orthologs #369. Best score 468 bits
Score difference with first non-orthologous sequence - L.chalumnae:320 P.pallidum:468

H3B216              	100.00%		D3B5Y1              	100.00%
H3B3N8              	100.00%		
Bootstrap support for H3B216 as seed ortholog is 100%.
Bootstrap support for H3B3N8 as seed ortholog is 100%.
Bootstrap support for D3B5Y1 as seed ortholog is 100%.

Group of orthologs #370. Best score 467 bits
Score difference with first non-orthologous sequence - L.chalumnae:37 P.pallidum:62

H3B8R3              	100.00%		D3B962              	100.00%
H3AQ74              	80.62%		
Bootstrap support for H3B8R3 as seed ortholog is 85%.
Bootstrap support for D3B962 as seed ortholog is 95%.

Group of orthologs #371. Best score 465 bits
Score difference with first non-orthologous sequence - L.chalumnae:259 P.pallidum:336

H3A2S9              	100.00%		D3B5B2              	100.00%
H3A9U2              	50.08%		
Bootstrap support for H3A2S9 as seed ortholog is 100%.
Bootstrap support for D3B5B2 as seed ortholog is 100%.

Group of orthologs #372. Best score 465 bits
Score difference with first non-orthologous sequence - L.chalumnae:318 P.pallidum:465

H3BEA8              	100.00%		D3BMA5              	100.00%
H3B2E9              	53.77%		
Bootstrap support for H3BEA8 as seed ortholog is 100%.
Bootstrap support for D3BMA5 as seed ortholog is 100%.

Group of orthologs #373. Best score 465 bits
Score difference with first non-orthologous sequence - L.chalumnae:465 P.pallidum:465

H3A3L5              	100.00%		D3B796              	100.00%
Bootstrap support for H3A3L5 as seed ortholog is 100%.
Bootstrap support for D3B796 as seed ortholog is 100%.

Group of orthologs #374. Best score 464 bits
Score difference with first non-orthologous sequence - L.chalumnae:464 P.pallidum:464

M3XJ18              	100.00%		D3BNT9              	100.00%
M3XK23              	51.47%		
H3BDQ2              	20.69%		
H3AGW4              	18.14%		
Bootstrap support for M3XJ18 as seed ortholog is 100%.
Bootstrap support for D3BNT9 as seed ortholog is 100%.

Group of orthologs #375. Best score 464 bits
Score difference with first non-orthologous sequence - L.chalumnae:211 P.pallidum:323

H3A2F9              	100.00%		D3B471              	100.00%
H3A126              	28.85%		
Bootstrap support for H3A2F9 as seed ortholog is 100%.
Bootstrap support for D3B471 as seed ortholog is 100%.

Group of orthologs #376. Best score 464 bits
Score difference with first non-orthologous sequence - L.chalumnae:464 P.pallidum:464

H2ZS88              	100.00%		D3BH79              	100.00%
Bootstrap support for H2ZS88 as seed ortholog is 100%.
Bootstrap support for D3BH79 as seed ortholog is 100%.

Group of orthologs #377. Best score 463 bits
Score difference with first non-orthologous sequence - L.chalumnae:389 P.pallidum:463

H3ALS6              	100.00%		D3BDL6              	100.00%
Bootstrap support for H3ALS6 as seed ortholog is 100%.
Bootstrap support for D3BDL6 as seed ortholog is 100%.

Group of orthologs #378. Best score 463 bits
Score difference with first non-orthologous sequence - L.chalumnae:463 P.pallidum:463

H3BDS6              	100.00%		D3BQ86              	100.00%
Bootstrap support for H3BDS6 as seed ortholog is 100%.
Bootstrap support for D3BQ86 as seed ortholog is 100%.

Group of orthologs #379. Best score 462 bits
Score difference with first non-orthologous sequence - L.chalumnae:462 P.pallidum:462

H3AQD0              	100.00%		D3B6L3              	100.00%
Bootstrap support for H3AQD0 as seed ortholog is 100%.
Bootstrap support for D3B6L3 as seed ortholog is 100%.

Group of orthologs #380. Best score 461 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.pallidum:120

H3A5A8              	100.00%		D3AW75              	100.00%
Bootstrap support for H3A5A8 as seed ortholog is 90%.
Bootstrap support for D3AW75 as seed ortholog is 99%.

Group of orthologs #381. Best score 461 bits
Score difference with first non-orthologous sequence - L.chalumnae:461 P.pallidum:461

H3A040              	100.00%		D3BPQ4              	100.00%
Bootstrap support for H3A040 as seed ortholog is 100%.
Bootstrap support for D3BPQ4 as seed ortholog is 100%.

Group of orthologs #382. Best score 460 bits
Score difference with first non-orthologous sequence - L.chalumnae:460 P.pallidum:460

H3AV84              	100.00%		D3BKM1              	100.00%
Bootstrap support for H3AV84 as seed ortholog is 100%.
Bootstrap support for D3BKM1 as seed ortholog is 100%.

Group of orthologs #383. Best score 459 bits
Score difference with first non-orthologous sequence - L.chalumnae:459 P.pallidum:459

H3AM32              	100.00%		D3AZL5              	100.00%
H2ZS30              	8.70%		
Bootstrap support for H3AM32 as seed ortholog is 100%.
Bootstrap support for D3AZL5 as seed ortholog is 100%.

Group of orthologs #384. Best score 459 bits
Score difference with first non-orthologous sequence - L.chalumnae:459 P.pallidum:459

H3AIR8              	100.00%		D3B8L6              	100.00%
Bootstrap support for H3AIR8 as seed ortholog is 100%.
Bootstrap support for D3B8L6 as seed ortholog is 100%.

Group of orthologs #385. Best score 459 bits
Score difference with first non-orthologous sequence - L.chalumnae:307 P.pallidum:288

H3B6I7              	100.00%		D3B161              	100.00%
Bootstrap support for H3B6I7 as seed ortholog is 100%.
Bootstrap support for D3B161 as seed ortholog is 100%.

Group of orthologs #386. Best score 458 bits
Score difference with first non-orthologous sequence - L.chalumnae:458 P.pallidum:458

H3BFW1              	100.00%		D3BIF1              	100.00%
Bootstrap support for H3BFW1 as seed ortholog is 100%.
Bootstrap support for D3BIF1 as seed ortholog is 100%.

Group of orthologs #387. Best score 458 bits
Score difference with first non-orthologous sequence - L.chalumnae:369 P.pallidum:278

M3XKY6              	100.00%		D3BQM9              	100.00%
Bootstrap support for M3XKY6 as seed ortholog is 100%.
Bootstrap support for D3BQM9 as seed ortholog is 100%.

Group of orthologs #388. Best score 457 bits
Score difference with first non-orthologous sequence - L.chalumnae:457 P.pallidum:457

H2ZYS3              	100.00%		D3BQ08              	100.00%
H3A6P8              	44.71%		
Bootstrap support for H2ZYS3 as seed ortholog is 100%.
Bootstrap support for D3BQ08 as seed ortholog is 100%.

Group of orthologs #389. Best score 457 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.pallidum:404

H3AHF6              	100.00%		D3BDA3              	100.00%
H3B1Z2              	35.46%		
Bootstrap support for H3AHF6 as seed ortholog is 99%.
Bootstrap support for D3BDA3 as seed ortholog is 100%.

Group of orthologs #390. Best score 456 bits
Score difference with first non-orthologous sequence - L.chalumnae:456 P.pallidum:456

H3AL35              	100.00%		D3B588              	100.00%
                    	       		D3BKC2              	10.53%
Bootstrap support for H3AL35 as seed ortholog is 100%.
Bootstrap support for D3B588 as seed ortholog is 100%.

Group of orthologs #391. Best score 456 bits
Score difference with first non-orthologous sequence - L.chalumnae:456 P.pallidum:456

H3ADS0              	100.00%		D3BUM9              	100.00%
                    	       		D3AXQ3              	13.68%
Bootstrap support for H3ADS0 as seed ortholog is 100%.
Bootstrap support for D3BUM9 as seed ortholog is 100%.

Group of orthologs #392. Best score 456 bits
Score difference with first non-orthologous sequence - L.chalumnae:456 P.pallidum:456

H3AUI3              	100.00%		D3BH81              	100.00%
Bootstrap support for H3AUI3 as seed ortholog is 100%.
Bootstrap support for D3BH81 as seed ortholog is 100%.

Group of orthologs #393. Best score 455 bits
Score difference with first non-orthologous sequence - L.chalumnae:455 P.pallidum:455

H2ZYA8              	100.00%		D3BTQ4              	100.00%
H3BDJ1              	31.88%		
H3AR52              	23.58%		
Bootstrap support for H2ZYA8 as seed ortholog is 100%.
Bootstrap support for D3BTQ4 as seed ortholog is 100%.

Group of orthologs #394. Best score 455 bits
Score difference with first non-orthologous sequence - L.chalumnae:455 P.pallidum:455

H3AST4              	100.00%		D3BV45              	100.00%
H3A702              	7.43%		
Bootstrap support for H3AST4 as seed ortholog is 100%.
Bootstrap support for D3BV45 as seed ortholog is 100%.

Group of orthologs #395. Best score 455 bits
Score difference with first non-orthologous sequence - L.chalumnae:455 P.pallidum:455

H3A1Z2              	100.00%		D3B072              	100.00%
Bootstrap support for H3A1Z2 as seed ortholog is 100%.
Bootstrap support for D3B072 as seed ortholog is 100%.

Group of orthologs #396. Best score 454 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 P.pallidum:238

H3ARP6              	100.00%		D3B2D6              	100.00%
H3AAB0              	57.14%		
H3AJJ4              	54.87%		
H3AXU8              	41.02%		
Bootstrap support for H3ARP6 as seed ortholog is 98%.
Bootstrap support for D3B2D6 as seed ortholog is 100%.

Group of orthologs #397. Best score 454 bits
Score difference with first non-orthologous sequence - L.chalumnae:343 P.pallidum:454

H3AJZ4              	100.00%		D3AXJ0              	100.00%
Bootstrap support for H3AJZ4 as seed ortholog is 100%.
Bootstrap support for D3AXJ0 as seed ortholog is 100%.

Group of orthologs #398. Best score 453 bits
Score difference with first non-orthologous sequence - L.chalumnae:453 P.pallidum:453

H3AZZ8              	100.00%		D3BVN2              	100.00%
Bootstrap support for H3AZZ8 as seed ortholog is 100%.
Bootstrap support for D3BVN2 as seed ortholog is 100%.

Group of orthologs #399. Best score 452 bits
Score difference with first non-orthologous sequence - L.chalumnae:452 P.pallidum:452

H3ABG6              	100.00%		D3BFI2              	100.00%
H2ZU38              	37.03%		
Bootstrap support for H3ABG6 as seed ortholog is 100%.
Bootstrap support for D3BFI2 as seed ortholog is 100%.

Group of orthologs #400. Best score 451 bits
Score difference with first non-orthologous sequence - L.chalumnae:238 P.pallidum:451

H2ZUI0              	100.00%		D3B224              	100.00%
Bootstrap support for H2ZUI0 as seed ortholog is 99%.
Bootstrap support for D3B224 as seed ortholog is 100%.

Group of orthologs #401. Best score 450 bits
Score difference with first non-orthologous sequence - L.chalumnae:132 P.pallidum:35

H3ARA3              	100.00%		D3B1J5              	100.00%
H3BAQ6              	36.21%		
H3A3X6              	5.49%		
Bootstrap support for H3ARA3 as seed ortholog is 99%.
Bootstrap support for D3B1J5 as seed ortholog is 68%.
Alternative seed ortholog is D3BAI4 (35 bits away from this cluster)

Group of orthologs #402. Best score 450 bits
Score difference with first non-orthologous sequence - L.chalumnae:450 P.pallidum:450

H2ZZG1              	100.00%		D3B6R8              	100.00%
Bootstrap support for H2ZZG1 as seed ortholog is 100%.
Bootstrap support for D3B6R8 as seed ortholog is 100%.

Group of orthologs #403. Best score 450 bits
Score difference with first non-orthologous sequence - L.chalumnae:450 P.pallidum:450

H3AC08              	100.00%		D3B1M1              	100.00%
Bootstrap support for H3AC08 as seed ortholog is 100%.
Bootstrap support for D3B1M1 as seed ortholog is 100%.

Group of orthologs #404. Best score 450 bits
Score difference with first non-orthologous sequence - L.chalumnae:450 P.pallidum:450

H3AHN5              	100.00%		D3AYC8              	100.00%
Bootstrap support for H3AHN5 as seed ortholog is 100%.
Bootstrap support for D3AYC8 as seed ortholog is 100%.

Group of orthologs #405. Best score 450 bits
Score difference with first non-orthologous sequence - L.chalumnae:450 P.pallidum:450

H3BG71              	100.00%		D3AVG7              	100.00%
Bootstrap support for H3BG71 as seed ortholog is 100%.
Bootstrap support for D3AVG7 as seed ortholog is 100%.

Group of orthologs #406. Best score 448 bits
Score difference with first non-orthologous sequence - L.chalumnae:330 P.pallidum:359

H2ZUG2              	100.00%		D3AVR8              	100.00%
Bootstrap support for H2ZUG2 as seed ortholog is 100%.
Bootstrap support for D3AVR8 as seed ortholog is 100%.

Group of orthologs #407. Best score 448 bits
Score difference with first non-orthologous sequence - L.chalumnae:448 P.pallidum:448

H3A697              	100.00%		D3AY89              	100.00%
Bootstrap support for H3A697 as seed ortholog is 100%.
Bootstrap support for D3AY89 as seed ortholog is 100%.

Group of orthologs #408. Best score 448 bits
Score difference with first non-orthologous sequence - L.chalumnae:448 P.pallidum:106

H3AW53              	100.00%		D3B6F1              	100.00%
Bootstrap support for H3AW53 as seed ortholog is 100%.
Bootstrap support for D3B6F1 as seed ortholog is 98%.

Group of orthologs #409. Best score 448 bits
Score difference with first non-orthologous sequence - L.chalumnae:448 P.pallidum:448

H3AAA3              	100.00%		D3BSE5              	100.00%
Bootstrap support for H3AAA3 as seed ortholog is 100%.
Bootstrap support for D3BSE5 as seed ortholog is 100%.

Group of orthologs #410. Best score 447 bits
Score difference with first non-orthologous sequence - L.chalumnae:132 P.pallidum:447

H2ZYW9              	100.00%		D3BQI1              	100.00%
Bootstrap support for H2ZYW9 as seed ortholog is 62%.
Alternative seed ortholog is H3AZF3 (132 bits away from this cluster)
Bootstrap support for D3BQI1 as seed ortholog is 100%.

Group of orthologs #411. Best score 446 bits
Score difference with first non-orthologous sequence - L.chalumnae:446 P.pallidum:446

H3ADY5              	100.00%		D3B2S4              	100.00%
Bootstrap support for H3ADY5 as seed ortholog is 100%.
Bootstrap support for D3B2S4 as seed ortholog is 100%.

Group of orthologs #412. Best score 446 bits
Score difference with first non-orthologous sequence - L.chalumnae:352 P.pallidum:364

H3B2K6              	100.00%		D3AXN9              	100.00%
Bootstrap support for H3B2K6 as seed ortholog is 100%.
Bootstrap support for D3AXN9 as seed ortholog is 100%.

Group of orthologs #413. Best score 446 bits
Score difference with first non-orthologous sequence - L.chalumnae:446 P.pallidum:446

H3AKD1              	100.00%		D3BCL1              	100.00%
Bootstrap support for H3AKD1 as seed ortholog is 100%.
Bootstrap support for D3BCL1 as seed ortholog is 100%.

Group of orthologs #414. Best score 446 bits
Score difference with first non-orthologous sequence - L.chalumnae:446 P.pallidum:250

H3B7I4              	100.00%		D3BLI8              	100.00%
Bootstrap support for H3B7I4 as seed ortholog is 100%.
Bootstrap support for D3BLI8 as seed ortholog is 99%.

Group of orthologs #415. Best score 445 bits
Score difference with first non-orthologous sequence - L.chalumnae:317 P.pallidum:445

H3BFU7              	100.00%		D3AZG6              	100.00%
Bootstrap support for H3BFU7 as seed ortholog is 100%.
Bootstrap support for D3AZG6 as seed ortholog is 100%.

Group of orthologs #416. Best score 445 bits
Score difference with first non-orthologous sequence - L.chalumnae:445 P.pallidum:445

H3BHA3              	100.00%		D3B512              	100.00%
Bootstrap support for H3BHA3 as seed ortholog is 100%.
Bootstrap support for D3B512 as seed ortholog is 100%.

Group of orthologs #417. Best score 444 bits
Score difference with first non-orthologous sequence - L.chalumnae:444 P.pallidum:444

H3BD54              	100.00%		D3BV78              	100.00%
H3AVH1              	8.06%		
Bootstrap support for H3BD54 as seed ortholog is 100%.
Bootstrap support for D3BV78 as seed ortholog is 100%.

Group of orthologs #418. Best score 442 bits
Score difference with first non-orthologous sequence - L.chalumnae:442 P.pallidum:303

H3BA83              	100.00%		D3BEV0              	100.00%
Bootstrap support for H3BA83 as seed ortholog is 100%.
Bootstrap support for D3BEV0 as seed ortholog is 100%.

Group of orthologs #419. Best score 441 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 P.pallidum:398

H3AZX5              	100.00%		D3B3G3              	100.00%
                    	       		D3B6H9              	11.46%
Bootstrap support for H3AZX5 as seed ortholog is 99%.
Bootstrap support for D3B3G3 as seed ortholog is 100%.

Group of orthologs #420. Best score 441 bits
Score difference with first non-orthologous sequence - L.chalumnae:273 P.pallidum:263

H3AB20              	100.00%		D3B9K7              	100.00%
Bootstrap support for H3AB20 as seed ortholog is 99%.
Bootstrap support for D3B9K7 as seed ortholog is 99%.

Group of orthologs #421. Best score 441 bits
Score difference with first non-orthologous sequence - L.chalumnae:441 P.pallidum:441

H3ACE6              	100.00%		D3BIJ9              	100.00%
Bootstrap support for H3ACE6 as seed ortholog is 100%.
Bootstrap support for D3BIJ9 as seed ortholog is 100%.

Group of orthologs #422. Best score 441 bits
Score difference with first non-orthologous sequence - L.chalumnae:357 P.pallidum:387

H3AZV3              	100.00%		D3BBG6              	100.00%
Bootstrap support for H3AZV3 as seed ortholog is 100%.
Bootstrap support for D3BBG6 as seed ortholog is 100%.

Group of orthologs #423. Best score 441 bits
Score difference with first non-orthologous sequence - L.chalumnae:183 P.pallidum:441

H3BBZ5              	100.00%		D3BI15              	100.00%
Bootstrap support for H3BBZ5 as seed ortholog is 100%.
Bootstrap support for D3BI15 as seed ortholog is 100%.

Group of orthologs #424. Best score 440 bits
Score difference with first non-orthologous sequence - L.chalumnae:440 P.pallidum:440

M3XKF1              	100.00%		D3B3Q8              	100.00%
Bootstrap support for M3XKF1 as seed ortholog is 100%.
Bootstrap support for D3B3Q8 as seed ortholog is 100%.

Group of orthologs #425. Best score 439 bits
Score difference with first non-orthologous sequence - L.chalumnae:439 P.pallidum:439

H3AMV4              	100.00%		D3BAM6              	100.00%
Bootstrap support for H3AMV4 as seed ortholog is 100%.
Bootstrap support for D3BAM6 as seed ortholog is 100%.

Group of orthologs #426. Best score 438 bits
Score difference with first non-orthologous sequence - L.chalumnae:438 P.pallidum:438

H3AJ43              	100.00%		D3AX52              	100.00%
Bootstrap support for H3AJ43 as seed ortholog is 100%.
Bootstrap support for D3AX52 as seed ortholog is 100%.

Group of orthologs #427. Best score 437 bits
Score difference with first non-orthologous sequence - L.chalumnae:437 P.pallidum:172

H2ZZ12              	100.00%		D3BFM3              	100.00%
Bootstrap support for H2ZZ12 as seed ortholog is 100%.
Bootstrap support for D3BFM3 as seed ortholog is 100%.

Group of orthologs #428. Best score 436 bits
Score difference with first non-orthologous sequence - L.chalumnae:209 P.pallidum:320

H3AJD9              	100.00%		D3BH32              	100.00%
H3B4P4              	31.86%		
Bootstrap support for H3AJD9 as seed ortholog is 99%.
Bootstrap support for D3BH32 as seed ortholog is 100%.

Group of orthologs #429. Best score 436 bits
Score difference with first non-orthologous sequence - L.chalumnae:153 P.pallidum:258

H3B1E5              	100.00%		D3BEH8              	100.00%
Bootstrap support for H3B1E5 as seed ortholog is 99%.
Bootstrap support for D3BEH8 as seed ortholog is 100%.

Group of orthologs #430. Best score 436 bits
Score difference with first non-orthologous sequence - L.chalumnae:170 P.pallidum:185

H3BGP9              	100.00%		D3B528              	100.00%
Bootstrap support for H3BGP9 as seed ortholog is 99%.
Bootstrap support for D3B528 as seed ortholog is 99%.

Group of orthologs #431. Best score 436 bits
Score difference with first non-orthologous sequence - L.chalumnae:226 P.pallidum:436

M3XJT3              	100.00%		D3BB07              	100.00%
Bootstrap support for M3XJT3 as seed ortholog is 100%.
Bootstrap support for D3BB07 as seed ortholog is 100%.

Group of orthologs #432. Best score 434 bits
Score difference with first non-orthologous sequence - L.chalumnae:156 P.pallidum:261

H3AFV9              	100.00%		D3B1I2              	100.00%
H3ARG2              	64.74%		
Bootstrap support for H3AFV9 as seed ortholog is 99%.
Bootstrap support for D3B1I2 as seed ortholog is 100%.

Group of orthologs #433. Best score 434 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.pallidum:61

H3AJC6              	100.00%		D3BAX3              	100.00%
                    	       		D3B6W9              	48.81%
Bootstrap support for H3AJC6 as seed ortholog is 97%.
Bootstrap support for D3BAX3 as seed ortholog is 88%.

Group of orthologs #434. Best score 434 bits
Score difference with first non-orthologous sequence - L.chalumnae:313 P.pallidum:434

H3AIG9              	100.00%		D3AZM5              	100.00%
Bootstrap support for H3AIG9 as seed ortholog is 100%.
Bootstrap support for D3AZM5 as seed ortholog is 100%.

Group of orthologs #435. Best score 434 bits
Score difference with first non-orthologous sequence - L.chalumnae:434 P.pallidum:434

H3A9Y8              	100.00%		D3B866              	100.00%
Bootstrap support for H3A9Y8 as seed ortholog is 100%.
Bootstrap support for D3B866 as seed ortholog is 100%.

Group of orthologs #436. Best score 433 bits
Score difference with first non-orthologous sequence - L.chalumnae:433 P.pallidum:433

H3A0V7              	100.00%		D3BJF3              	100.00%
H3BCT1              	72.23%		
Bootstrap support for H3A0V7 as seed ortholog is 100%.
Bootstrap support for D3BJF3 as seed ortholog is 100%.

Group of orthologs #437. Best score 433 bits
Score difference with first non-orthologous sequence - L.chalumnae:433 P.pallidum:433

H3ADV7              	100.00%		D3B1Z3              	100.00%
Bootstrap support for H3ADV7 as seed ortholog is 100%.
Bootstrap support for D3B1Z3 as seed ortholog is 100%.

Group of orthologs #438. Best score 433 bits
Score difference with first non-orthologous sequence - L.chalumnae:433 P.pallidum:433

H3ABS4              	100.00%		D3B481              	100.00%
Bootstrap support for H3ABS4 as seed ortholog is 100%.
Bootstrap support for D3B481 as seed ortholog is 100%.

Group of orthologs #439. Best score 433 bits
Score difference with first non-orthologous sequence - L.chalumnae:433 P.pallidum:433

H3AW57              	100.00%		D3B491              	100.00%
Bootstrap support for H3AW57 as seed ortholog is 100%.
Bootstrap support for D3B491 as seed ortholog is 100%.

Group of orthologs #440. Best score 433 bits
Score difference with first non-orthologous sequence - L.chalumnae:433 P.pallidum:133

H3BD51              	100.00%		D3B9P6              	100.00%
Bootstrap support for H3BD51 as seed ortholog is 100%.
Bootstrap support for D3B9P6 as seed ortholog is 99%.

Group of orthologs #441. Best score 432 bits
Score difference with first non-orthologous sequence - L.chalumnae:432 P.pallidum:432

H3ASQ7              	100.00%		D3BJV5              	100.00%
Bootstrap support for H3ASQ7 as seed ortholog is 100%.
Bootstrap support for D3BJV5 as seed ortholog is 100%.

Group of orthologs #442. Best score 432 bits
Score difference with first non-orthologous sequence - L.chalumnae:291 P.pallidum:322

H3B073              	100.00%		D3BM03              	100.00%
Bootstrap support for H3B073 as seed ortholog is 100%.
Bootstrap support for D3BM03 as seed ortholog is 100%.

Group of orthologs #443. Best score 432 bits
Score difference with first non-orthologous sequence - L.chalumnae:15 P.pallidum:43

M3XK05              	100.00%		D3BRE6              	100.00%
Bootstrap support for M3XK05 as seed ortholog is 66%.
Alternative seed ortholog is H3B882 (15 bits away from this cluster)
Bootstrap support for D3BRE6 as seed ortholog is 80%.

Group of orthologs #444. Best score 431 bits
Score difference with first non-orthologous sequence - L.chalumnae:431 P.pallidum:431

H3AT42              	100.00%		D3BUD7              	100.00%
H3AWZ8              	46.00%		D3BKB8              	28.23%
Bootstrap support for H3AT42 as seed ortholog is 100%.
Bootstrap support for D3BUD7 as seed ortholog is 100%.

Group of orthologs #445. Best score 431 bits
Score difference with first non-orthologous sequence - L.chalumnae:431 P.pallidum:431

H3AMY6              	100.00%		D3B0B4              	100.00%
Bootstrap support for H3AMY6 as seed ortholog is 100%.
Bootstrap support for D3B0B4 as seed ortholog is 100%.

Group of orthologs #446. Best score 431 bits
Score difference with first non-orthologous sequence - L.chalumnae:431 P.pallidum:431

H3B1Y6              	100.00%		D3AWC6              	100.00%
Bootstrap support for H3B1Y6 as seed ortholog is 100%.
Bootstrap support for D3AWC6 as seed ortholog is 100%.

Group of orthologs #447. Best score 430 bits
Score difference with first non-orthologous sequence - L.chalumnae:430 P.pallidum:218

M3XLC8              	100.00%		D3BPU0              	100.00%
Bootstrap support for M3XLC8 as seed ortholog is 100%.
Bootstrap support for D3BPU0 as seed ortholog is 99%.

Group of orthologs #448. Best score 429 bits
Score difference with first non-orthologous sequence - L.chalumnae:429 P.pallidum:429

H3AGI4              	100.00%		D3BQE7              	100.00%
Bootstrap support for H3AGI4 as seed ortholog is 100%.
Bootstrap support for D3BQE7 as seed ortholog is 100%.

Group of orthologs #449. Best score 428 bits
Score difference with first non-orthologous sequence - L.chalumnae:428 P.pallidum:428

H3A0R1              	100.00%		D3B606              	100.00%
H2ZS79              	56.89%		
Bootstrap support for H3A0R1 as seed ortholog is 100%.
Bootstrap support for D3B606 as seed ortholog is 100%.

Group of orthologs #450. Best score 428 bits
Score difference with first non-orthologous sequence - L.chalumnae:428 P.pallidum:186

H3AEX7              	100.00%		D3AY64              	100.00%
Bootstrap support for H3AEX7 as seed ortholog is 100%.
Bootstrap support for D3AY64 as seed ortholog is 99%.

Group of orthologs #451. Best score 428 bits
Score difference with first non-orthologous sequence - L.chalumnae:428 P.pallidum:428

H3AFQ6              	100.00%		D3B3U0              	100.00%
Bootstrap support for H3AFQ6 as seed ortholog is 100%.
Bootstrap support for D3B3U0 as seed ortholog is 100%.

Group of orthologs #452. Best score 428 bits
Score difference with first non-orthologous sequence - L.chalumnae:428 P.pallidum:428

H3APT1              	100.00%		D3AZX0              	100.00%
Bootstrap support for H3APT1 as seed ortholog is 100%.
Bootstrap support for D3AZX0 as seed ortholog is 100%.

Group of orthologs #453. Best score 427 bits
Score difference with first non-orthologous sequence - L.chalumnae:427 P.pallidum:345

H3AHT7              	100.00%		D3BR10              	100.00%
Bootstrap support for H3AHT7 as seed ortholog is 100%.
Bootstrap support for D3BR10 as seed ortholog is 100%.

Group of orthologs #454. Best score 426 bits
Score difference with first non-orthologous sequence - L.chalumnae:336 P.pallidum:382

H3AT29              	100.00%		D3AYY7              	100.00%
Bootstrap support for H3AT29 as seed ortholog is 100%.
Bootstrap support for D3AYY7 as seed ortholog is 100%.

Group of orthologs #455. Best score 426 bits
Score difference with first non-orthologous sequence - L.chalumnae:287 P.pallidum:301

H3AI71              	100.00%		D3B7P5              	100.00%
Bootstrap support for H3AI71 as seed ortholog is 100%.
Bootstrap support for D3B7P5 as seed ortholog is 100%.

Group of orthologs #456. Best score 426 bits
Score difference with first non-orthologous sequence - L.chalumnae:268 P.pallidum:321

H3AYP5              	100.00%		D3BB75              	100.00%
Bootstrap support for H3AYP5 as seed ortholog is 100%.
Bootstrap support for D3BB75 as seed ortholog is 100%.

Group of orthologs #457. Best score 426 bits
Score difference with first non-orthologous sequence - L.chalumnae:426 P.pallidum:426

H3AQ44              	100.00%		D3BQG1              	100.00%
Bootstrap support for H3AQ44 as seed ortholog is 100%.
Bootstrap support for D3BQG1 as seed ortholog is 100%.

Group of orthologs #458. Best score 425 bits
Score difference with first non-orthologous sequence - L.chalumnae:425 P.pallidum:425

H3A4W2              	100.00%		D3BJC8              	100.00%
H3A2P0              	46.12%		
H3ATB3              	21.60%		
Bootstrap support for H3A4W2 as seed ortholog is 100%.
Bootstrap support for D3BJC8 as seed ortholog is 100%.

Group of orthologs #459. Best score 425 bits
Score difference with first non-orthologous sequence - L.chalumnae:349 P.pallidum:368

H3AUG7              	100.00%		D3BE81              	100.00%
                    	       		D3BCT5              	20.45%
Bootstrap support for H3AUG7 as seed ortholog is 100%.
Bootstrap support for D3BE81 as seed ortholog is 100%.

Group of orthologs #460. Best score 425 bits
Score difference with first non-orthologous sequence - L.chalumnae:184 P.pallidum:216

H3BEA4              	100.00%		D3AVP3              	100.00%
Bootstrap support for H3BEA4 as seed ortholog is 99%.
Bootstrap support for D3AVP3 as seed ortholog is 99%.

Group of orthologs #461. Best score 424 bits
Score difference with first non-orthologous sequence - L.chalumnae:212 P.pallidum:235

H2ZZW0              	100.00%		D3B4X1              	100.00%
Bootstrap support for H2ZZW0 as seed ortholog is 100%.
Bootstrap support for D3B4X1 as seed ortholog is 100%.

Group of orthologs #462. Best score 424 bits
Score difference with first non-orthologous sequence - L.chalumnae:424 P.pallidum:424

H2ZW51              	100.00%		D3BNF4              	100.00%
Bootstrap support for H2ZW51 as seed ortholog is 100%.
Bootstrap support for D3BNF4 as seed ortholog is 100%.

Group of orthologs #463. Best score 424 bits
Score difference with first non-orthologous sequence - L.chalumnae:424 P.pallidum:424

H3BEB0              	100.00%		D3BP70              	100.00%
Bootstrap support for H3BEB0 as seed ortholog is 100%.
Bootstrap support for D3BP70 as seed ortholog is 100%.

Group of orthologs #464. Best score 423 bits
Score difference with first non-orthologous sequence - L.chalumnae:423 P.pallidum:423

H2ZRY4              	100.00%		D3AX55              	100.00%
Bootstrap support for H2ZRY4 as seed ortholog is 100%.
Bootstrap support for D3AX55 as seed ortholog is 100%.

Group of orthologs #465. Best score 423 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 P.pallidum:423

H3A7L7              	100.00%		D3BK71              	100.00%
Bootstrap support for H3A7L7 as seed ortholog is 99%.
Bootstrap support for D3BK71 as seed ortholog is 100%.

Group of orthologs #466. Best score 423 bits
Score difference with first non-orthologous sequence - L.chalumnae:423 P.pallidum:423

H3A3A1              	100.00%		D3BRT9              	100.00%
Bootstrap support for H3A3A1 as seed ortholog is 100%.
Bootstrap support for D3BRT9 as seed ortholog is 100%.

Group of orthologs #467. Best score 423 bits
Score difference with first non-orthologous sequence - L.chalumnae:423 P.pallidum:423

H3BAQ1              	100.00%		D3BBG3              	100.00%
Bootstrap support for H3BAQ1 as seed ortholog is 100%.
Bootstrap support for D3BBG3 as seed ortholog is 100%.

Group of orthologs #468. Best score 422 bits
Score difference with first non-orthologous sequence - L.chalumnae:422 P.pallidum:260

H3AX40              	100.00%		D3B2W2              	100.00%
Bootstrap support for H3AX40 as seed ortholog is 100%.
Bootstrap support for D3B2W2 as seed ortholog is 100%.

Group of orthologs #469. Best score 422 bits
Score difference with first non-orthologous sequence - L.chalumnae:422 P.pallidum:345

M3XKA9              	100.00%		D3BIZ7              	100.00%
Bootstrap support for M3XKA9 as seed ortholog is 100%.
Bootstrap support for D3BIZ7 as seed ortholog is 100%.

Group of orthologs #470. Best score 421 bits
Score difference with first non-orthologous sequence - L.chalumnae:421 P.pallidum:421

H3AVP9              	100.00%		D3AYA8              	100.00%
Bootstrap support for H3AVP9 as seed ortholog is 100%.
Bootstrap support for D3AYA8 as seed ortholog is 100%.

Group of orthologs #471. Best score 419 bits
Score difference with first non-orthologous sequence - L.chalumnae:419 P.pallidum:419

H3APX4              	100.00%		D3BQJ7              	100.00%
Bootstrap support for H3APX4 as seed ortholog is 100%.
Bootstrap support for D3BQJ7 as seed ortholog is 100%.

Group of orthologs #472. Best score 419 bits
Score difference with first non-orthologous sequence - L.chalumnae:334 P.pallidum:419

H3AZ57              	100.00%		D3BU07              	100.00%
Bootstrap support for H3AZ57 as seed ortholog is 100%.
Bootstrap support for D3BU07 as seed ortholog is 100%.

Group of orthologs #473. Best score 419 bits
Score difference with first non-orthologous sequence - L.chalumnae:231 P.pallidum:189

H3B895              	100.00%		D3BPS6              	100.00%
Bootstrap support for H3B895 as seed ortholog is 100%.
Bootstrap support for D3BPS6 as seed ortholog is 100%.

Group of orthologs #474. Best score 417 bits
Score difference with first non-orthologous sequence - L.chalumnae:291 P.pallidum:417

H3ARN1              	100.00%		D3BD24              	100.00%
H3AP32              	25.32%		D3BCZ6              	16.77%
                    	       		D3B3R0              	16.00%
Bootstrap support for H3ARN1 as seed ortholog is 100%.
Bootstrap support for D3BD24 as seed ortholog is 100%.

Group of orthologs #475. Best score 417 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 P.pallidum:78

H3AI90              	100.00%		D3B313              	100.00%
H3A406              	64.88%		
H3BGB6              	53.19%		
Bootstrap support for H3AI90 as seed ortholog is 91%.
Bootstrap support for D3B313 as seed ortholog is 94%.

Group of orthologs #476. Best score 416 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 P.pallidum:323

H3AXN7              	100.00%		D3B7Y7              	100.00%
H3AAB8              	24.59%		
Bootstrap support for H3AXN7 as seed ortholog is 93%.
Bootstrap support for D3B7Y7 as seed ortholog is 100%.

Group of orthologs #477. Best score 416 bits
Score difference with first non-orthologous sequence - L.chalumnae:416 P.pallidum:416

H2ZVF2              	100.00%		D3BK65              	100.00%
Bootstrap support for H2ZVF2 as seed ortholog is 100%.
Bootstrap support for D3BK65 as seed ortholog is 100%.

Group of orthologs #478. Best score 416 bits
Score difference with first non-orthologous sequence - L.chalumnae:416 P.pallidum:416

H3APE0              	100.00%		D3B8H0              	100.00%
Bootstrap support for H3APE0 as seed ortholog is 100%.
Bootstrap support for D3B8H0 as seed ortholog is 100%.

Group of orthologs #479. Best score 416 bits
Score difference with first non-orthologous sequence - L.chalumnae:238 P.pallidum:276

M3XGY2              	100.00%		D3AXX6              	100.00%
Bootstrap support for M3XGY2 as seed ortholog is 100%.
Bootstrap support for D3AXX6 as seed ortholog is 100%.

Group of orthologs #480. Best score 416 bits
Score difference with first non-orthologous sequence - L.chalumnae:416 P.pallidum:416

H3B421              	100.00%		D3BEA4              	100.00%
Bootstrap support for H3B421 as seed ortholog is 100%.
Bootstrap support for D3BEA4 as seed ortholog is 100%.

Group of orthologs #481. Best score 415 bits
Score difference with first non-orthologous sequence - L.chalumnae:415 P.pallidum:415

H3APB6              	100.00%		D3BF26              	100.00%
Bootstrap support for H3APB6 as seed ortholog is 100%.
Bootstrap support for D3BF26 as seed ortholog is 100%.

Group of orthologs #482. Best score 414 bits
Score difference with first non-orthologous sequence - L.chalumnae:277 P.pallidum:280

H3AIS8              	100.00%		D3B6H6              	100.00%
H3A3Z0              	51.84%		
H3BFX6              	6.05%		
Bootstrap support for H3AIS8 as seed ortholog is 100%.
Bootstrap support for D3B6H6 as seed ortholog is 100%.

Group of orthologs #483. Best score 414 bits
Score difference with first non-orthologous sequence - L.chalumnae:414 P.pallidum:414

H3A880              	100.00%		D3BQJ3              	100.00%
Bootstrap support for H3A880 as seed ortholog is 100%.
Bootstrap support for D3BQJ3 as seed ortholog is 100%.

Group of orthologs #484. Best score 413 bits
Score difference with first non-orthologous sequence - L.chalumnae:413 P.pallidum:413

H3B343              	100.00%		D3BE27              	100.00%
H3BHN0              	44.42%		
Bootstrap support for H3B343 as seed ortholog is 100%.
Bootstrap support for D3BE27 as seed ortholog is 100%.

Group of orthologs #485. Best score 413 bits
Score difference with first non-orthologous sequence - L.chalumnae:413 P.pallidum:413

H3APA8              	100.00%		D3AZB4              	100.00%
Bootstrap support for H3APA8 as seed ortholog is 100%.
Bootstrap support for D3AZB4 as seed ortholog is 100%.

Group of orthologs #486. Best score 413 bits
Score difference with first non-orthologous sequence - L.chalumnae:413 P.pallidum:311

H3ATH0              	100.00%		D3B601              	100.00%
Bootstrap support for H3ATH0 as seed ortholog is 100%.
Bootstrap support for D3B601 as seed ortholog is 100%.

Group of orthologs #487. Best score 413 bits
Score difference with first non-orthologous sequence - L.chalumnae:245 P.pallidum:244

H3BHU5              	100.00%		D3AWT6              	100.00%
Bootstrap support for H3BHU5 as seed ortholog is 100%.
Bootstrap support for D3AWT6 as seed ortholog is 100%.

Group of orthologs #488. Best score 413 bits
Score difference with first non-orthologous sequence - L.chalumnae:413 P.pallidum:413

H3BGZ0              	100.00%		D3BKC5              	100.00%
Bootstrap support for H3BGZ0 as seed ortholog is 100%.
Bootstrap support for D3BKC5 as seed ortholog is 100%.

Group of orthologs #489. Best score 412 bits
Score difference with first non-orthologous sequence - L.chalumnae:412 P.pallidum:412

H3AYG2              	100.00%		D3AXC9              	100.00%
H3B8C2              	38.54%		
H3AXR7              	33.17%		
Bootstrap support for H3AYG2 as seed ortholog is 100%.
Bootstrap support for D3AXC9 as seed ortholog is 100%.

Group of orthologs #490. Best score 412 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 P.pallidum:75

H3A085              	100.00%		D3B7N1              	100.00%
                    	       		D3BQA7              	7.27%
Bootstrap support for H3A085 as seed ortholog is 89%.
Bootstrap support for D3B7N1 as seed ortholog is 93%.

Group of orthologs #491. Best score 412 bits
Score difference with first non-orthologous sequence - L.chalumnae:172 P.pallidum:301

H2ZWW5              	100.00%		D3B6G4              	100.00%
Bootstrap support for H2ZWW5 as seed ortholog is 99%.
Bootstrap support for D3B6G4 as seed ortholog is 100%.

Group of orthologs #492. Best score 410 bits
Score difference with first non-orthologous sequence - L.chalumnae:410 P.pallidum:410

H3ARW1              	100.00%		D3BCZ2              	100.00%
H3B1S4              	58.85%		
Bootstrap support for H3ARW1 as seed ortholog is 100%.
Bootstrap support for D3BCZ2 as seed ortholog is 100%.

Group of orthologs #493. Best score 410 bits
Score difference with first non-orthologous sequence - L.chalumnae:292 P.pallidum:410

M3XKJ9              	100.00%		D3BLP5              	100.00%
Bootstrap support for M3XKJ9 as seed ortholog is 100%.
Bootstrap support for D3BLP5 as seed ortholog is 100%.

Group of orthologs #494. Best score 409 bits
Score difference with first non-orthologous sequence - L.chalumnae:221 P.pallidum:409

H3BDR0              	100.00%		D3B2I1              	100.00%
Bootstrap support for H3BDR0 as seed ortholog is 99%.
Bootstrap support for D3B2I1 as seed ortholog is 100%.

Group of orthologs #495. Best score 409 bits
Score difference with first non-orthologous sequence - L.chalumnae:409 P.pallidum:409

H3B4E4              	100.00%		D3BBL0              	100.00%
Bootstrap support for H3B4E4 as seed ortholog is 100%.
Bootstrap support for D3BBL0 as seed ortholog is 100%.

Group of orthologs #496. Best score 408 bits
Score difference with first non-orthologous sequence - L.chalumnae:408 P.pallidum:408

H3AM68              	100.00%		D3B4T9              	100.00%
Bootstrap support for H3AM68 as seed ortholog is 100%.
Bootstrap support for D3B4T9 as seed ortholog is 100%.

Group of orthologs #497. Best score 405 bits
Score difference with first non-orthologous sequence - L.chalumnae:202 P.pallidum:281

H3ANX5              	100.00%		D3B695              	100.00%
Bootstrap support for H3ANX5 as seed ortholog is 99%.
Bootstrap support for D3B695 as seed ortholog is 100%.

Group of orthologs #498. Best score 404 bits
Score difference with first non-orthologous sequence - L.chalumnae:260 P.pallidum:293

H3A9S1              	100.00%		D3B392              	100.00%
H3ACG6              	32.83%		
H3AVD6              	31.31%		
H3B262              	28.88%		
Bootstrap support for H3A9S1 as seed ortholog is 99%.
Bootstrap support for D3B392 as seed ortholog is 100%.

Group of orthologs #499. Best score 404 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.pallidum:404

H3A8U4              	100.00%		D3BB39              	100.00%
Bootstrap support for H3A8U4 as seed ortholog is 94%.
Bootstrap support for D3BB39 as seed ortholog is 100%.

Group of orthologs #500. Best score 404 bits
Score difference with first non-orthologous sequence - L.chalumnae:404 P.pallidum:404

H3BC39              	100.00%		D3BB01              	100.00%
Bootstrap support for H3BC39 as seed ortholog is 100%.
Bootstrap support for D3BB01 as seed ortholog is 100%.

Group of orthologs #501. Best score 403 bits
Score difference with first non-orthologous sequence - L.chalumnae:403 P.pallidum:403

H2ZRN6              	100.00%		D3AX79              	100.00%
                    	       		D3B1X4              	43.08%
                    	       		D3AWH0              	34.70%
                    	       		D3AWU7              	24.17%
Bootstrap support for H2ZRN6 as seed ortholog is 100%.
Bootstrap support for D3AX79 as seed ortholog is 100%.

Group of orthologs #502. Best score 403 bits
Score difference with first non-orthologous sequence - L.chalumnae:291 P.pallidum:403

H3ADX7              	100.00%		D3BJZ6              	100.00%
Bootstrap support for H3ADX7 as seed ortholog is 100%.
Bootstrap support for D3BJZ6 as seed ortholog is 100%.

Group of orthologs #503. Best score 402 bits
Score difference with first non-orthologous sequence - L.chalumnae:41 P.pallidum:83

H2ZZ30              	100.00%		D3BUD0              	100.00%
Bootstrap support for H2ZZ30 as seed ortholog is 17%.
Alternative seed ortholog is H3A9R8 (41 bits away from this cluster)
Bootstrap support for D3BUD0 as seed ortholog is 98%.

Group of orthologs #504. Best score 402 bits
Score difference with first non-orthologous sequence - L.chalumnae:402 P.pallidum:402

H3B640              	100.00%		D3BD87              	100.00%
Bootstrap support for H3B640 as seed ortholog is 100%.
Bootstrap support for D3BD87 as seed ortholog is 100%.

Group of orthologs #505. Best score 401 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.pallidum:181

H3BE86              	100.00%		D3B755              	100.00%
H2ZST8              	8.67%		
Bootstrap support for H3BE86 as seed ortholog is 99%.
Bootstrap support for D3B755 as seed ortholog is 99%.

Group of orthologs #506. Best score 401 bits
Score difference with first non-orthologous sequence - L.chalumnae:401 P.pallidum:191

H2ZRU1              	100.00%		D3B5U3              	100.00%
Bootstrap support for H2ZRU1 as seed ortholog is 100%.
Bootstrap support for D3B5U3 as seed ortholog is 100%.

Group of orthologs #507. Best score 401 bits
Score difference with first non-orthologous sequence - L.chalumnae:401 P.pallidum:401

H3A547              	100.00%		D3B3Z7              	100.00%
Bootstrap support for H3A547 as seed ortholog is 100%.
Bootstrap support for D3B3Z7 as seed ortholog is 100%.

Group of orthologs #508. Best score 401 bits
Score difference with first non-orthologous sequence - L.chalumnae:401 P.pallidum:401

H3B4G2              	100.00%		D3BL94              	100.00%
Bootstrap support for H3B4G2 as seed ortholog is 100%.
Bootstrap support for D3BL94 as seed ortholog is 100%.

Group of orthologs #509. Best score 400 bits
Score difference with first non-orthologous sequence - L.chalumnae:246 P.pallidum:400

H3B4N2              	100.00%		D3B0J5              	100.00%
Bootstrap support for H3B4N2 as seed ortholog is 100%.
Bootstrap support for D3B0J5 as seed ortholog is 100%.

Group of orthologs #510. Best score 399 bits
Score difference with first non-orthologous sequence - L.chalumnae:399 P.pallidum:399

H3BBH2              	100.00%		D3BBF8              	100.00%
H3A3B8              	58.44%		
Bootstrap support for H3BBH2 as seed ortholog is 100%.
Bootstrap support for D3BBF8 as seed ortholog is 100%.

Group of orthologs #511. Best score 398 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 P.pallidum:398

H3ARE4              	100.00%		D3BUY8              	100.00%
H3AFJ8              	9.13%		
Bootstrap support for H3ARE4 as seed ortholog is 100%.
Bootstrap support for D3BUY8 as seed ortholog is 100%.

Group of orthologs #512. Best score 398 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 P.pallidum:93

H3B0G7              	100.00%		D3BAU8              	100.00%
Bootstrap support for H3B0G7 as seed ortholog is 99%.
Bootstrap support for D3BAU8 as seed ortholog is 99%.

Group of orthologs #513. Best score 397 bits
Score difference with first non-orthologous sequence - L.chalumnae:397 P.pallidum:397

H3BC66              	100.00%		D3BV36              	100.00%
H3BHT4              	50.24%		D3B2K8              	6.73%
H3B1H5              	45.37%		
H3AT49              	43.33%		
Bootstrap support for H3BC66 as seed ortholog is 100%.
Bootstrap support for D3BV36 as seed ortholog is 100%.

Group of orthologs #514. Best score 397 bits
Score difference with first non-orthologous sequence - L.chalumnae:397 P.pallidum:397

H3ASW1              	100.00%		D3BHU2              	100.00%
H2ZZ89              	41.67%		
Bootstrap support for H3ASW1 as seed ortholog is 100%.
Bootstrap support for D3BHU2 as seed ortholog is 100%.

Group of orthologs #515. Best score 397 bits
Score difference with first non-orthologous sequence - L.chalumnae:219 P.pallidum:121

H2ZZT1              	100.00%		D3BAM1              	100.00%
Bootstrap support for H2ZZT1 as seed ortholog is 100%.
Bootstrap support for D3BAM1 as seed ortholog is 99%.

Group of orthologs #516. Best score 396 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 P.pallidum:196

H2ZZA6              	100.00%		D3BJJ1              	100.00%
Bootstrap support for H2ZZA6 as seed ortholog is 99%.
Bootstrap support for D3BJJ1 as seed ortholog is 100%.

Group of orthologs #517. Best score 396 bits
Score difference with first non-orthologous sequence - L.chalumnae:252 P.pallidum:327

H3B5L5              	100.00%		D3BE97              	100.00%
Bootstrap support for H3B5L5 as seed ortholog is 100%.
Bootstrap support for D3BE97 as seed ortholog is 100%.

Group of orthologs #518. Best score 396 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.pallidum:131

M3XH50              	100.00%		D3B968              	100.00%
Bootstrap support for M3XH50 as seed ortholog is 99%.
Bootstrap support for D3B968 as seed ortholog is 100%.

Group of orthologs #519. Best score 395 bits
Score difference with first non-orthologous sequence - L.chalumnae:395 P.pallidum:395

H3A9U8              	100.00%		D3BEK9              	100.00%
H3AGV0              	54.95%		
Bootstrap support for H3A9U8 as seed ortholog is 100%.
Bootstrap support for D3BEK9 as seed ortholog is 100%.

Group of orthologs #520. Best score 394 bits
Score difference with first non-orthologous sequence - L.chalumnae:394 P.pallidum:343

H3AVP2              	100.00%		D3BBS3              	100.00%
Bootstrap support for H3AVP2 as seed ortholog is 100%.
Bootstrap support for D3BBS3 as seed ortholog is 100%.

Group of orthologs #521. Best score 394 bits
Score difference with first non-orthologous sequence - L.chalumnae:264 P.pallidum:394

H3AWF8              	100.00%		D3BCH5              	100.00%
Bootstrap support for H3AWF8 as seed ortholog is 100%.
Bootstrap support for D3BCH5 as seed ortholog is 100%.

Group of orthologs #522. Best score 394 bits
Score difference with first non-orthologous sequence - L.chalumnae:394 P.pallidum:394

H3ABU7              	100.00%		D3BVM9              	100.00%
Bootstrap support for H3ABU7 as seed ortholog is 100%.
Bootstrap support for D3BVM9 as seed ortholog is 100%.

Group of orthologs #523. Best score 393 bits
Score difference with first non-orthologous sequence - L.chalumnae:393 P.pallidum:393

H3BHT1              	100.00%		D3BMP8              	100.00%
H2ZUX2              	23.56%		D3B338              	13.68%
H2ZV85              	11.14%		
Bootstrap support for H3BHT1 as seed ortholog is 100%.
Bootstrap support for D3BMP8 as seed ortholog is 100%.

Group of orthologs #524. Best score 393 bits
Score difference with first non-orthologous sequence - L.chalumnae:10 P.pallidum:117

H3BI57              	100.00%		D3BMU7              	100.00%
H3AGI8              	34.88%		
Bootstrap support for H3BI57 as seed ortholog is 63%.
Alternative seed ortholog is H3AIY6 (10 bits away from this cluster)
Bootstrap support for D3BMU7 as seed ortholog is 99%.

Group of orthologs #525. Best score 393 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.pallidum:393

H3B284              	100.00%		D3B0T3              	100.00%
Bootstrap support for H3B284 as seed ortholog is 99%.
Bootstrap support for D3B0T3 as seed ortholog is 100%.

Group of orthologs #526. Best score 393 bits
Score difference with first non-orthologous sequence - L.chalumnae:393 P.pallidum:393

H3AQC9              	100.00%		D3BIF4              	100.00%
Bootstrap support for H3AQC9 as seed ortholog is 100%.
Bootstrap support for D3BIF4 as seed ortholog is 100%.

Group of orthologs #527. Best score 391 bits
Score difference with first non-orthologous sequence - L.chalumnae:254 P.pallidum:280

H3AU68              	100.00%		D3AVU2              	100.00%
H3ARC4              	74.93%		
H3A1I1              	72.82%		
Bootstrap support for H3AU68 as seed ortholog is 100%.
Bootstrap support for D3AVU2 as seed ortholog is 100%.

Group of orthologs #528. Best score 391 bits
Score difference with first non-orthologous sequence - L.chalumnae:312 P.pallidum:280

H3ASD6              	100.00%		D3BK08              	100.00%
Bootstrap support for H3ASD6 as seed ortholog is 100%.
Bootstrap support for D3BK08 as seed ortholog is 100%.

Group of orthologs #529. Best score 390 bits
Score difference with first non-orthologous sequence - L.chalumnae:390 P.pallidum:390

H2ZSG1              	100.00%		D3BFF5              	100.00%
Bootstrap support for H2ZSG1 as seed ortholog is 100%.
Bootstrap support for D3BFF5 as seed ortholog is 100%.

Group of orthologs #530. Best score 389 bits
Score difference with first non-orthologous sequence - L.chalumnae:278 P.pallidum:224

H3ADX1              	100.00%		D3B2T1              	100.00%
H3AL16              	74.06%		
H3AR27              	70.75%		
H3BB87              	29.72%		
Bootstrap support for H3ADX1 as seed ortholog is 100%.
Bootstrap support for D3B2T1 as seed ortholog is 100%.

Group of orthologs #531. Best score 389 bits
Score difference with first non-orthologous sequence - L.chalumnae:278 P.pallidum:389

H3A1L6              	100.00%		D3AWJ9              	100.00%
Bootstrap support for H3A1L6 as seed ortholog is 100%.
Bootstrap support for D3AWJ9 as seed ortholog is 100%.

Group of orthologs #532. Best score 389 bits
Score difference with first non-orthologous sequence - L.chalumnae:389 P.pallidum:317

H3AGE6              	100.00%		D3B9T8              	100.00%
Bootstrap support for H3AGE6 as seed ortholog is 100%.
Bootstrap support for D3B9T8 as seed ortholog is 100%.

Group of orthologs #533. Best score 389 bits
Score difference with first non-orthologous sequence - L.chalumnae:389 P.pallidum:389

H3AGB4              	100.00%		D3BJU0              	100.00%
Bootstrap support for H3AGB4 as seed ortholog is 100%.
Bootstrap support for D3BJU0 as seed ortholog is 100%.

Group of orthologs #534. Best score 389 bits
Score difference with first non-orthologous sequence - L.chalumnae:272 P.pallidum:276

H3BBM0              	100.00%		D3BVR5              	100.00%
Bootstrap support for H3BBM0 as seed ortholog is 100%.
Bootstrap support for D3BVR5 as seed ortholog is 100%.

Group of orthologs #535. Best score 388 bits
Score difference with first non-orthologous sequence - L.chalumnae:388 P.pallidum:388

H3A9S5              	100.00%		D3BUP7              	100.00%
                    	       		D3BUP8              	21.37%
                    	       		D3B4I2              	20.23%
Bootstrap support for H3A9S5 as seed ortholog is 100%.
Bootstrap support for D3BUP7 as seed ortholog is 100%.

Group of orthologs #536. Best score 388 bits
Score difference with first non-orthologous sequence - L.chalumnae:388 P.pallidum:388

H2ZVE2              	100.00%		D3B0Z1              	100.00%
H3BA52              	33.40%		
Bootstrap support for H2ZVE2 as seed ortholog is 100%.
Bootstrap support for D3B0Z1 as seed ortholog is 100%.

Group of orthologs #537. Best score 387 bits
Score difference with first non-orthologous sequence - L.chalumnae:387 P.pallidum:387

M3XKG3              	100.00%		D3BF49              	100.00%
Bootstrap support for M3XKG3 as seed ortholog is 100%.
Bootstrap support for D3BF49 as seed ortholog is 100%.

Group of orthologs #538. Best score 386 bits
Score difference with first non-orthologous sequence - L.chalumnae:386 P.pallidum:386

H3A587              	100.00%		D3BPT5              	100.00%
Bootstrap support for H3A587 as seed ortholog is 100%.
Bootstrap support for D3BPT5 as seed ortholog is 100%.

Group of orthologs #539. Best score 386 bits
Score difference with first non-orthologous sequence - L.chalumnae:386 P.pallidum:386

H3ABN2              	100.00%		D3BJC7              	100.00%
Bootstrap support for H3ABN2 as seed ortholog is 100%.
Bootstrap support for D3BJC7 as seed ortholog is 100%.

Group of orthologs #540. Best score 386 bits
Score difference with first non-orthologous sequence - L.chalumnae:241 P.pallidum:386

M3XKF9              	100.00%		D3BB25              	100.00%
Bootstrap support for M3XKF9 as seed ortholog is 100%.
Bootstrap support for D3BB25 as seed ortholog is 100%.

Group of orthologs #541. Best score 385 bits
Score difference with first non-orthologous sequence - L.chalumnae:214 P.pallidum:385

H2ZWA6              	100.00%		D3BMW4              	100.00%
Bootstrap support for H2ZWA6 as seed ortholog is 99%.
Bootstrap support for D3BMW4 as seed ortholog is 100%.

Group of orthologs #542. Best score 385 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.pallidum:385

H3AQ52              	100.00%		D3BHS9              	100.00%
Bootstrap support for H3AQ52 as seed ortholog is 99%.
Bootstrap support for D3BHS9 as seed ortholog is 100%.

Group of orthologs #543. Best score 384 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.pallidum:93

H3ATX2              	100.00%		D3BST6              	100.00%
M3XGW1              	50.37%		
H3B4E0              	42.62%		
H3B4R4              	25.89%		
Bootstrap support for H3ATX2 as seed ortholog is 99%.
Bootstrap support for D3BST6 as seed ortholog is 99%.

Group of orthologs #544. Best score 384 bits
Score difference with first non-orthologous sequence - L.chalumnae:384 P.pallidum:384

H3AM09              	100.00%		D3BKL2              	100.00%
H3AKA5              	58.67%		
H3A3J8              	55.49%		
Bootstrap support for H3AM09 as seed ortholog is 100%.
Bootstrap support for D3BKL2 as seed ortholog is 100%.

Group of orthologs #545. Best score 383 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 P.pallidum:21

H3B2Q8              	100.00%		D3B3I4              	100.00%
H3B3M5              	100.00%		
H3ABY5              	56.94%		
Bootstrap support for H3B2Q8 as seed ortholog is 94%.
Bootstrap support for H3B3M5 as seed ortholog is 94%.
Bootstrap support for D3B3I4 as seed ortholog is 66%.
Alternative seed ortholog is D3AZN8 (21 bits away from this cluster)

Group of orthologs #546. Best score 383 bits
Score difference with first non-orthologous sequence - L.chalumnae:311 P.pallidum:383

H3BDP2              	100.00%		D3BCF9              	100.00%
H3A4X6              	55.34%		
Bootstrap support for H3BDP2 as seed ortholog is 100%.
Bootstrap support for D3BCF9 as seed ortholog is 100%.

Group of orthologs #547. Best score 383 bits
Score difference with first non-orthologous sequence - L.chalumnae:268 P.pallidum:383

H3BI08              	100.00%		D3BV44              	100.00%
Bootstrap support for H3BI08 as seed ortholog is 100%.
Bootstrap support for D3BV44 as seed ortholog is 100%.

Group of orthologs #548. Best score 382 bits
Score difference with first non-orthologous sequence - L.chalumnae:382 P.pallidum:382

H2ZVZ4              	100.00%		D3BEF1              	100.00%
Bootstrap support for H2ZVZ4 as seed ortholog is 100%.
Bootstrap support for D3BEF1 as seed ortholog is 100%.

Group of orthologs #549. Best score 382 bits
Score difference with first non-orthologous sequence - L.chalumnae:382 P.pallidum:382

H2ZXR2              	100.00%		D3BJT1              	100.00%
Bootstrap support for H2ZXR2 as seed ortholog is 100%.
Bootstrap support for D3BJT1 as seed ortholog is 100%.

Group of orthologs #550. Best score 382 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.pallidum:219

H2ZSL0              	100.00%		D3BQ35              	100.00%
Bootstrap support for H2ZSL0 as seed ortholog is 85%.
Bootstrap support for D3BQ35 as seed ortholog is 100%.

Group of orthologs #551. Best score 382 bits
Score difference with first non-orthologous sequence - L.chalumnae:382 P.pallidum:382

H3B1N4              	100.00%		D3BDT3              	100.00%
Bootstrap support for H3B1N4 as seed ortholog is 100%.
Bootstrap support for D3BDT3 as seed ortholog is 100%.

Group of orthologs #552. Best score 381 bits
Score difference with first non-orthologous sequence - L.chalumnae:381 P.pallidum:381

H3BDK8              	100.00%		D3AY55              	100.00%
Bootstrap support for H3BDK8 as seed ortholog is 100%.
Bootstrap support for D3AY55 as seed ortholog is 100%.

Group of orthologs #553. Best score 381 bits
Score difference with first non-orthologous sequence - L.chalumnae:381 P.pallidum:381

H3B2D8              	100.00%		D3B8D7              	100.00%
Bootstrap support for H3B2D8 as seed ortholog is 100%.
Bootstrap support for D3B8D7 as seed ortholog is 100%.

Group of orthologs #554. Best score 380 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.pallidum:115

H3ADX0              	100.00%		D3B2C8              	100.00%
H3B425              	46.64%		D3B2C9              	37.12%
H3B1T5              	6.58%		D3BM64              	27.25%
Bootstrap support for H3ADX0 as seed ortholog is 99%.
Bootstrap support for D3B2C8 as seed ortholog is 99%.

Group of orthologs #555. Best score 379 bits
Score difference with first non-orthologous sequence - L.chalumnae:379 P.pallidum:379

H3ATJ8              	100.00%		D3B0M1              	100.00%
H3AAG4              	61.69%		
Bootstrap support for H3ATJ8 as seed ortholog is 100%.
Bootstrap support for D3B0M1 as seed ortholog is 100%.

Group of orthologs #556. Best score 379 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 P.pallidum:379

H3AFN1              	100.00%		D3B0D6              	100.00%
Bootstrap support for H3AFN1 as seed ortholog is 100%.
Bootstrap support for D3B0D6 as seed ortholog is 100%.

Group of orthologs #557. Best score 378 bits
Score difference with first non-orthologous sequence - L.chalumnae:378 P.pallidum:378

H2ZY28              	100.00%		D3BSA4              	100.00%
H3BB88              	33.47%		
Bootstrap support for H2ZY28 as seed ortholog is 100%.
Bootstrap support for D3BSA4 as seed ortholog is 100%.

Group of orthologs #558. Best score 378 bits
Score difference with first non-orthologous sequence - L.chalumnae:378 P.pallidum:378

H3AW81              	100.00%		D3AW51              	100.00%
Bootstrap support for H3AW81 as seed ortholog is 100%.
Bootstrap support for D3AW51 as seed ortholog is 100%.

Group of orthologs #559. Best score 378 bits
Score difference with first non-orthologous sequence - L.chalumnae:378 P.pallidum:253

H3A7N5              	100.00%		D3BMH9              	100.00%
Bootstrap support for H3A7N5 as seed ortholog is 100%.
Bootstrap support for D3BMH9 as seed ortholog is 100%.

Group of orthologs #560. Best score 378 bits
Score difference with first non-orthologous sequence - L.chalumnae:378 P.pallidum:308

H3B0D8              	100.00%		D3BPY6              	100.00%
Bootstrap support for H3B0D8 as seed ortholog is 100%.
Bootstrap support for D3BPY6 as seed ortholog is 100%.

Group of orthologs #561. Best score 377 bits
Score difference with first non-orthologous sequence - L.chalumnae:248 P.pallidum:377

H3AZ67              	100.00%		D3B573              	100.00%
Bootstrap support for H3AZ67 as seed ortholog is 100%.
Bootstrap support for D3B573 as seed ortholog is 100%.

Group of orthologs #562. Best score 377 bits
Score difference with first non-orthologous sequence - L.chalumnae:229 P.pallidum:48

H3BAH2              	100.00%		D3B7L8              	100.00%
Bootstrap support for H3BAH2 as seed ortholog is 100%.
Bootstrap support for D3B7L8 as seed ortholog is 94%.

Group of orthologs #563. Best score 376 bits
Score difference with first non-orthologous sequence - L.chalumnae:376 P.pallidum:376

H3ANT7              	100.00%		D3BPY7              	100.00%
H3AEM8              	37.51%		
Bootstrap support for H3ANT7 as seed ortholog is 100%.
Bootstrap support for D3BPY7 as seed ortholog is 100%.

Group of orthologs #564. Best score 376 bits
Score difference with first non-orthologous sequence - L.chalumnae:376 P.pallidum:376

H3BDF9              	100.00%		D3AZK7              	100.00%
Bootstrap support for H3BDF9 as seed ortholog is 100%.
Bootstrap support for D3AZK7 as seed ortholog is 100%.

Group of orthologs #565. Best score 375 bits
Score difference with first non-orthologous sequence - L.chalumnae:375 P.pallidum:375

H3BD20              	100.00%		D3BAJ3              	100.00%
Bootstrap support for H3BD20 as seed ortholog is 100%.
Bootstrap support for D3BAJ3 as seed ortholog is 100%.

Group of orthologs #566. Best score 374 bits
Score difference with first non-orthologous sequence - L.chalumnae:374 P.pallidum:374

H3A244              	100.00%		D3B298              	100.00%
Bootstrap support for H3A244 as seed ortholog is 100%.
Bootstrap support for D3B298 as seed ortholog is 100%.

Group of orthologs #567. Best score 374 bits
Score difference with first non-orthologous sequence - L.chalumnae:374 P.pallidum:374

H3ACK3              	100.00%		D3BCN3              	100.00%
Bootstrap support for H3ACK3 as seed ortholog is 100%.
Bootstrap support for D3BCN3 as seed ortholog is 100%.

Group of orthologs #568. Best score 373 bits
Score difference with first non-orthologous sequence - L.chalumnae:279 P.pallidum:145

H2ZU93              	100.00%		D3BHH0              	100.00%
H3B892              	47.80%		
Bootstrap support for H2ZU93 as seed ortholog is 100%.
Bootstrap support for D3BHH0 as seed ortholog is 100%.

Group of orthologs #569. Best score 373 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 P.pallidum:112

H3AXE1              	100.00%		D3B9A5              	100.00%
H3ADK9              	80.69%		
Bootstrap support for H3AXE1 as seed ortholog is 99%.
Bootstrap support for D3B9A5 as seed ortholog is 99%.

Group of orthologs #570. Best score 373 bits
Score difference with first non-orthologous sequence - L.chalumnae:373 P.pallidum:373

H3A9S8              	100.00%		D3B544              	100.00%
Bootstrap support for H3A9S8 as seed ortholog is 100%.
Bootstrap support for D3B544 as seed ortholog is 100%.

Group of orthologs #571. Best score 373 bits
Score difference with first non-orthologous sequence - L.chalumnae:373 P.pallidum:373

H3AQ45              	100.00%		D3AWP9              	100.00%
Bootstrap support for H3AQ45 as seed ortholog is 100%.
Bootstrap support for D3AWP9 as seed ortholog is 100%.

Group of orthologs #572. Best score 373 bits
Score difference with first non-orthologous sequence - L.chalumnae:373 P.pallidum:373

H3AF57              	100.00%		D3BEU0              	100.00%
Bootstrap support for H3AF57 as seed ortholog is 100%.
Bootstrap support for D3BEU0 as seed ortholog is 100%.

Group of orthologs #573. Best score 373 bits
Score difference with first non-orthologous sequence - L.chalumnae:373 P.pallidum:373

H3ARI0              	100.00%		D3BN73              	100.00%
Bootstrap support for H3ARI0 as seed ortholog is 100%.
Bootstrap support for D3BN73 as seed ortholog is 100%.

Group of orthologs #574. Best score 372 bits
Score difference with first non-orthologous sequence - L.chalumnae:372 P.pallidum:372

H3ABZ1              	100.00%		D3B761              	100.00%
Bootstrap support for H3ABZ1 as seed ortholog is 100%.
Bootstrap support for D3B761 as seed ortholog is 100%.

Group of orthologs #575. Best score 372 bits
Score difference with first non-orthologous sequence - L.chalumnae:372 P.pallidum:372

H3B323              	100.00%		D3B6B2              	100.00%
Bootstrap support for H3B323 as seed ortholog is 100%.
Bootstrap support for D3B6B2 as seed ortholog is 100%.

Group of orthologs #576. Best score 371 bits
Score difference with first non-orthologous sequence - L.chalumnae:371 P.pallidum:371

H3AV73              	100.00%		D3BLJ5              	100.00%
                    	       		D3BRB3              	6.47%
Bootstrap support for H3AV73 as seed ortholog is 100%.
Bootstrap support for D3BLJ5 as seed ortholog is 100%.

Group of orthologs #577. Best score 371 bits
Score difference with first non-orthologous sequence - L.chalumnae:175 P.pallidum:211

H3A0R9              	100.00%		D3BJI2              	100.00%
Bootstrap support for H3A0R9 as seed ortholog is 99%.
Bootstrap support for D3BJI2 as seed ortholog is 100%.

Group of orthologs #578. Best score 371 bits
Score difference with first non-orthologous sequence - L.chalumnae:185 P.pallidum:371

H3ADI2              	100.00%		D3BFD7              	100.00%
Bootstrap support for H3ADI2 as seed ortholog is 100%.
Bootstrap support for D3BFD7 as seed ortholog is 100%.

Group of orthologs #579. Best score 371 bits
Score difference with first non-orthologous sequence - L.chalumnae:371 P.pallidum:371

H3AZJ0              	100.00%		D3AY53              	100.00%
Bootstrap support for H3AZJ0 as seed ortholog is 100%.
Bootstrap support for D3AY53 as seed ortholog is 100%.

Group of orthologs #580. Best score 371 bits
Score difference with first non-orthologous sequence - L.chalumnae:315 P.pallidum:266

H3AIW4              	100.00%		D3BBN9              	100.00%
Bootstrap support for H3AIW4 as seed ortholog is 100%.
Bootstrap support for D3BBN9 as seed ortholog is 100%.

Group of orthologs #581. Best score 371 bits
Score difference with first non-orthologous sequence - L.chalumnae:371 P.pallidum:371

H3BCK7              	100.00%		D3BDL8              	100.00%
Bootstrap support for H3BCK7 as seed ortholog is 100%.
Bootstrap support for D3BDL8 as seed ortholog is 100%.

Group of orthologs #582. Best score 370 bits
Score difference with first non-orthologous sequence - L.chalumnae:322 P.pallidum:370

H2ZZ06              	100.00%		D3BCQ2              	100.00%
H3AM47              	29.16%		
M3XKH6              	28.79%		
Bootstrap support for H2ZZ06 as seed ortholog is 100%.
Bootstrap support for D3BCQ2 as seed ortholog is 100%.

Group of orthologs #583. Best score 370 bits
Score difference with first non-orthologous sequence - L.chalumnae:235 P.pallidum:370

H3B1M2              	100.00%		D3AZ74              	100.00%
Bootstrap support for H3B1M2 as seed ortholog is 100%.
Bootstrap support for D3AZ74 as seed ortholog is 100%.

Group of orthologs #584. Best score 370 bits
Score difference with first non-orthologous sequence - L.chalumnae:370 P.pallidum:370

H3BF19              	100.00%		D3BTM5              	100.00%
Bootstrap support for H3BF19 as seed ortholog is 100%.
Bootstrap support for D3BTM5 as seed ortholog is 100%.

Group of orthologs #585. Best score 369 bits
Score difference with first non-orthologous sequence - L.chalumnae:369 P.pallidum:168

H3A705              	100.00%		D3B210              	100.00%
H3A689              	48.14%		
H3B791              	39.71%		
H3AGI6              	23.99%		
H3AJG8              	6.32%		
H3B3J1              	5.83%		
Bootstrap support for H3A705 as seed ortholog is 100%.
Bootstrap support for D3B210 as seed ortholog is 99%.

Group of orthologs #586. Best score 369 bits
Score difference with first non-orthologous sequence - L.chalumnae:369 P.pallidum:369

H3A7G4              	100.00%		D3BRV9              	100.00%
H3AN53              	5.93%		
Bootstrap support for H3A7G4 as seed ortholog is 100%.
Bootstrap support for D3BRV9 as seed ortholog is 100%.

Group of orthologs #587. Best score 369 bits
Score difference with first non-orthologous sequence - L.chalumnae:28 P.pallidum:369

H3ASI3              	100.00%		D3BR30              	100.00%
H3B6Q6              	28.71%		
Bootstrap support for H3ASI3 as seed ortholog is 69%.
Alternative seed ortholog is H3BAN2 (28 bits away from this cluster)
Bootstrap support for D3BR30 as seed ortholog is 100%.

Group of orthologs #588. Best score 369 bits
Score difference with first non-orthologous sequence - L.chalumnae:369 P.pallidum:369

H3ACN5              	100.00%		D3B058              	100.00%
Bootstrap support for H3ACN5 as seed ortholog is 100%.
Bootstrap support for D3B058 as seed ortholog is 100%.

Group of orthologs #589. Best score 369 bits
Score difference with first non-orthologous sequence - L.chalumnae:369 P.pallidum:300

H3AGB5              	100.00%		D3AZL0              	100.00%
Bootstrap support for H3AGB5 as seed ortholog is 100%.
Bootstrap support for D3AZL0 as seed ortholog is 100%.

Group of orthologs #590. Best score 369 bits
Score difference with first non-orthologous sequence - L.chalumnae:369 P.pallidum:369

H3AUY8              	100.00%		D3BHW4              	100.00%
Bootstrap support for H3AUY8 as seed ortholog is 100%.
Bootstrap support for D3BHW4 as seed ortholog is 100%.

Group of orthologs #591. Best score 368 bits
Score difference with first non-orthologous sequence - L.chalumnae:233 P.pallidum:368

H2ZWZ6              	100.00%		D3AYJ1              	100.00%
Bootstrap support for H2ZWZ6 as seed ortholog is 100%.
Bootstrap support for D3AYJ1 as seed ortholog is 100%.

Group of orthologs #592. Best score 368 bits
Score difference with first non-orthologous sequence - L.chalumnae:368 P.pallidum:368

H3A1P7              	100.00%		D3B6X8              	100.00%
Bootstrap support for H3A1P7 as seed ortholog is 100%.
Bootstrap support for D3B6X8 as seed ortholog is 100%.

Group of orthologs #593. Best score 368 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 P.pallidum:368

H3BF83              	100.00%		D3B4T0              	100.00%
Bootstrap support for H3BF83 as seed ortholog is 91%.
Bootstrap support for D3B4T0 as seed ortholog is 100%.

Group of orthologs #594. Best score 367 bits
Score difference with first non-orthologous sequence - L.chalumnae:367 P.pallidum:367

H2ZVQ2              	100.00%		D3BQL2              	100.00%
Bootstrap support for H2ZVQ2 as seed ortholog is 100%.
Bootstrap support for D3BQL2 as seed ortholog is 100%.

Group of orthologs #595. Best score 367 bits
Score difference with first non-orthologous sequence - L.chalumnae:367 P.pallidum:367

H3AT53              	100.00%		D3BCL2              	100.00%
Bootstrap support for H3AT53 as seed ortholog is 100%.
Bootstrap support for D3BCL2 as seed ortholog is 100%.

Group of orthologs #596. Best score 366 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 P.pallidum:56

H3BDZ3              	100.00%		D3BRV8              	100.00%
H3ATU9              	73.55%		
H3AFI2              	68.90%		
H3BDS0              	34.01%		
H3ARH8              	26.74%		
H3BED5              	19.77%		
H3A6E3              	15.12%		
Bootstrap support for H3BDZ3 as seed ortholog is 97%.
Bootstrap support for D3BRV8 as seed ortholog is 94%.

Group of orthologs #597. Best score 366 bits
Score difference with first non-orthologous sequence - L.chalumnae:366 P.pallidum:366

H3B558              	100.00%		D3B6D7              	100.00%
H3AI51              	17.41%		
Bootstrap support for H3B558 as seed ortholog is 100%.
Bootstrap support for D3B6D7 as seed ortholog is 100%.

Group of orthologs #598. Best score 366 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.pallidum:163

H3BD96              	100.00%		D3B626              	100.00%
H3B9J3              	5.32%		
Bootstrap support for H3BD96 as seed ortholog is 99%.
Bootstrap support for D3B626 as seed ortholog is 99%.

Group of orthologs #599. Best score 366 bits
Score difference with first non-orthologous sequence - L.chalumnae:366 P.pallidum:366

H3AAE1              	100.00%		D3B5E8              	100.00%
Bootstrap support for H3AAE1 as seed ortholog is 100%.
Bootstrap support for D3B5E8 as seed ortholog is 100%.

Group of orthologs #600. Best score 366 bits
Score difference with first non-orthologous sequence - L.chalumnae:366 P.pallidum:366

H3ABJ6              	100.00%		D3BN92              	100.00%
Bootstrap support for H3ABJ6 as seed ortholog is 100%.
Bootstrap support for D3BN92 as seed ortholog is 100%.

Group of orthologs #601. Best score 365 bits
Score difference with first non-orthologous sequence - L.chalumnae:365 P.pallidum:365

H3AYI8              	100.00%		D3BES1              	100.00%
H3AAJ4              	8.28%		D3BGX1              	72.68%
Bootstrap support for H3AYI8 as seed ortholog is 100%.
Bootstrap support for D3BES1 as seed ortholog is 100%.

Group of orthologs #602. Best score 365 bits
Score difference with first non-orthologous sequence - L.chalumnae:365 P.pallidum:365

H3A516              	100.00%		D3B2H8              	100.00%
Bootstrap support for H3A516 as seed ortholog is 100%.
Bootstrap support for D3B2H8 as seed ortholog is 100%.

Group of orthologs #603. Best score 364 bits
Score difference with first non-orthologous sequence - L.chalumnae:364 P.pallidum:364

H3B932              	100.00%		D3AX88              	100.00%
H3A1P5              	49.85%		
H3ANP0              	30.36%		
Bootstrap support for H3B932 as seed ortholog is 100%.
Bootstrap support for D3AX88 as seed ortholog is 100%.

Group of orthologs #604. Best score 364 bits
Score difference with first non-orthologous sequence - L.chalumnae:147 P.pallidum:178

H2ZVI3              	100.00%		D3B2F1              	100.00%
Bootstrap support for H2ZVI3 as seed ortholog is 99%.
Bootstrap support for D3B2F1 as seed ortholog is 99%.

Group of orthologs #605. Best score 364 bits
Score difference with first non-orthologous sequence - L.chalumnae:17 P.pallidum:364

H3A8P1              	100.00%		D3B3W0              	100.00%
Bootstrap support for H3A8P1 as seed ortholog is 62%.
Alternative seed ortholog is H3A259 (17 bits away from this cluster)
Bootstrap support for D3B3W0 as seed ortholog is 100%.

Group of orthologs #606. Best score 364 bits
Score difference with first non-orthologous sequence - L.chalumnae:364 P.pallidum:364

H3BD24              	100.00%		D3BL50              	100.00%
Bootstrap support for H3BD24 as seed ortholog is 100%.
Bootstrap support for D3BL50 as seed ortholog is 100%.

Group of orthologs #607. Best score 363 bits
Score difference with first non-orthologous sequence - L.chalumnae:363 P.pallidum:363

H3AEK6              	100.00%		D3BGC6              	100.00%
H3A0U7              	62.40%		D3BAY2              	29.36%
H3AGM4              	52.05%		
Bootstrap support for H3AEK6 as seed ortholog is 100%.
Bootstrap support for D3BGC6 as seed ortholog is 100%.

Group of orthologs #608. Best score 363 bits
Score difference with first non-orthologous sequence - L.chalumnae:363 P.pallidum:363

H3B0E9              	100.00%		D3B0I3              	100.00%
                    	       		D3BMY2              	14.24%
Bootstrap support for H3B0E9 as seed ortholog is 100%.
Bootstrap support for D3B0I3 as seed ortholog is 100%.

Group of orthologs #609. Best score 363 bits
Score difference with first non-orthologous sequence - L.chalumnae:363 P.pallidum:363

H3AEA4              	100.00%		D3BLT0              	100.00%
H3AHC4              	22.20%		
Bootstrap support for H3AEA4 as seed ortholog is 100%.
Bootstrap support for D3BLT0 as seed ortholog is 100%.

Group of orthologs #610. Best score 362 bits
Score difference with first non-orthologous sequence - L.chalumnae:362 P.pallidum:362

H3A3P0              	100.00%		D3AWK3              	100.00%
Bootstrap support for H3A3P0 as seed ortholog is 100%.
Bootstrap support for D3AWK3 as seed ortholog is 100%.

Group of orthologs #611. Best score 362 bits
Score difference with first non-orthologous sequence - L.chalumnae:362 P.pallidum:273

H3AJQ5              	100.00%		D3B9G6              	100.00%
Bootstrap support for H3AJQ5 as seed ortholog is 100%.
Bootstrap support for D3B9G6 as seed ortholog is 100%.

Group of orthologs #612. Best score 361 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.pallidum:255

H3A4R9              	100.00%		D3BM83              	100.00%
H3AQ93              	12.91%		
H3A2R9              	9.12%		
Bootstrap support for H3A4R9 as seed ortholog is 94%.
Bootstrap support for D3BM83 as seed ortholog is 100%.

Group of orthologs #613. Best score 361 bits
Score difference with first non-orthologous sequence - L.chalumnae:361 P.pallidum:361

H3B466              	100.00%		D3BFU2              	100.00%
H3BEE7              	38.49%		
Bootstrap support for H3B466 as seed ortholog is 100%.
Bootstrap support for D3BFU2 as seed ortholog is 100%.

Group of orthologs #614. Best score 361 bits
Score difference with first non-orthologous sequence - L.chalumnae:280 P.pallidum:307

H3A6Q8              	100.00%		D3AVM8              	100.00%
Bootstrap support for H3A6Q8 as seed ortholog is 100%.
Bootstrap support for D3AVM8 as seed ortholog is 100%.

Group of orthologs #615. Best score 361 bits
Score difference with first non-orthologous sequence - L.chalumnae:361 P.pallidum:361

H2ZXF8              	100.00%		D3B5T9              	100.00%
Bootstrap support for H2ZXF8 as seed ortholog is 100%.
Bootstrap support for D3B5T9 as seed ortholog is 100%.

Group of orthologs #616. Best score 361 bits
Score difference with first non-orthologous sequence - L.chalumnae:361 P.pallidum:361

H3A6A2              	100.00%		D3BA80              	100.00%
Bootstrap support for H3A6A2 as seed ortholog is 100%.
Bootstrap support for D3BA80 as seed ortholog is 100%.

Group of orthologs #617. Best score 360 bits
Score difference with first non-orthologous sequence - L.chalumnae:360 P.pallidum:81

H2ZWA3              	100.00%		D3B1Q1              	100.00%
H3ATM2              	52.47%		
H3AZ43              	28.52%		
H3B9Y7              	26.30%		
Bootstrap support for H2ZWA3 as seed ortholog is 100%.
Bootstrap support for D3B1Q1 as seed ortholog is 80%.

Group of orthologs #618. Best score 360 bits
Score difference with first non-orthologous sequence - L.chalumnae:360 P.pallidum:360

H3B3Z3              	100.00%		D3B4Z7              	100.00%
Bootstrap support for H3B3Z3 as seed ortholog is 100%.
Bootstrap support for D3B4Z7 as seed ortholog is 100%.

Group of orthologs #619. Best score 359 bits
Score difference with first non-orthologous sequence - L.chalumnae:230 P.pallidum:309

H3A5L8              	100.00%		D3AWC2              	100.00%
H3BCV5              	49.95%		
H3AGX9              	41.68%		
H3B3Y7              	31.31%		
H3B2L2              	10.58%		
Bootstrap support for H3A5L8 as seed ortholog is 100%.
Bootstrap support for D3AWC2 as seed ortholog is 100%.

Group of orthologs #620. Best score 359 bits
Score difference with first non-orthologous sequence - L.chalumnae:359 P.pallidum:307

H2ZRX1              	100.00%		D3BE54              	100.00%
H2ZXP4              	5.99%		D3BBB8              	26.01%
Bootstrap support for H2ZRX1 as seed ortholog is 100%.
Bootstrap support for D3BE54 as seed ortholog is 100%.

Group of orthologs #621. Best score 359 bits
Score difference with first non-orthologous sequence - L.chalumnae:359 P.pallidum:359

H3AQU4              	100.00%		D3B367              	100.00%
H2ZVN7              	55.65%		
H3B2N2              	28.19%		
Bootstrap support for H3AQU4 as seed ortholog is 100%.
Bootstrap support for D3B367 as seed ortholog is 100%.

Group of orthologs #622. Best score 359 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.pallidum:359

H3AJ35              	100.00%		D3BIK1              	100.00%
H3A6K7              	49.94%		
H3B8N6              	45.38%		
Bootstrap support for H3AJ35 as seed ortholog is 93%.
Bootstrap support for D3BIK1 as seed ortholog is 100%.

Group of orthologs #623. Best score 359 bits
Score difference with first non-orthologous sequence - L.chalumnae:359 P.pallidum:359

H3BFG9              	100.00%		D3BU83              	100.00%
H3AMH0              	32.12%		
Bootstrap support for H3BFG9 as seed ortholog is 100%.
Bootstrap support for D3BU83 as seed ortholog is 100%.

Group of orthologs #624. Best score 359 bits
Score difference with first non-orthologous sequence - L.chalumnae:359 P.pallidum:359

H2ZX45              	100.00%		D3BCD7              	100.00%
Bootstrap support for H2ZX45 as seed ortholog is 100%.
Bootstrap support for D3BCD7 as seed ortholog is 100%.

Group of orthologs #625. Best score 359 bits
Score difference with first non-orthologous sequence - L.chalumnae:311 P.pallidum:310

H3AUE6              	100.00%		D3AWA6              	100.00%
Bootstrap support for H3AUE6 as seed ortholog is 100%.
Bootstrap support for D3AWA6 as seed ortholog is 100%.

Group of orthologs #626. Best score 359 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 P.pallidum:210

H3APH3              	100.00%		D3BCP1              	100.00%
Bootstrap support for H3APH3 as seed ortholog is 99%.
Bootstrap support for D3BCP1 as seed ortholog is 99%.

Group of orthologs #627. Best score 359 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.pallidum:164

H3AZL8              	100.00%		D3BL25              	100.00%
Bootstrap support for H3AZL8 as seed ortholog is 98%.
Bootstrap support for D3BL25 as seed ortholog is 99%.

Group of orthologs #628. Best score 359 bits
Score difference with first non-orthologous sequence - L.chalumnae:259 P.pallidum:359

H3B9P4              	100.00%		D3BED4              	100.00%
Bootstrap support for H3B9P4 as seed ortholog is 100%.
Bootstrap support for D3BED4 as seed ortholog is 100%.

Group of orthologs #629. Best score 358 bits
Score difference with first non-orthologous sequence - L.chalumnae:358 P.pallidum:358

H3ABX2              	100.00%		D3BE20              	100.00%
Bootstrap support for H3ABX2 as seed ortholog is 100%.
Bootstrap support for D3BE20 as seed ortholog is 100%.

Group of orthologs #630. Best score 358 bits
Score difference with first non-orthologous sequence - L.chalumnae:358 P.pallidum:358

H3AW86              	100.00%		D3BIF2              	100.00%
Bootstrap support for H3AW86 as seed ortholog is 100%.
Bootstrap support for D3BIF2 as seed ortholog is 100%.

Group of orthologs #631. Best score 358 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 P.pallidum:218

H3B0Y7              	100.00%		D3BM62              	100.00%
Bootstrap support for H3B0Y7 as seed ortholog is 99%.
Bootstrap support for D3BM62 as seed ortholog is 100%.

Group of orthologs #632. Best score 357 bits
Score difference with first non-orthologous sequence - L.chalumnae:357 P.pallidum:357

H2ZSD4              	100.00%		D3BDY0              	100.00%
Bootstrap support for H2ZSD4 as seed ortholog is 100%.
Bootstrap support for D3BDY0 as seed ortholog is 100%.

Group of orthologs #633. Best score 357 bits
Score difference with first non-orthologous sequence - L.chalumnae:357 P.pallidum:357

H3A8S5              	100.00%		D3BMV1              	100.00%
Bootstrap support for H3A8S5 as seed ortholog is 100%.
Bootstrap support for D3BMV1 as seed ortholog is 100%.

Group of orthologs #634. Best score 357 bits
Score difference with first non-orthologous sequence - L.chalumnae:357 P.pallidum:357

H3B8A6              	100.00%		D3BMZ6              	100.00%
Bootstrap support for H3B8A6 as seed ortholog is 100%.
Bootstrap support for D3BMZ6 as seed ortholog is 100%.

Group of orthologs #635. Best score 356 bits
Score difference with first non-orthologous sequence - L.chalumnae:356 P.pallidum:356

H3B6A3              	100.00%		D3B0J0              	100.00%
Bootstrap support for H3B6A3 as seed ortholog is 100%.
Bootstrap support for D3B0J0 as seed ortholog is 100%.

Group of orthologs #636. Best score 355 bits
Score difference with first non-orthologous sequence - L.chalumnae:29 P.pallidum:174

H3B1U6              	100.00%		D3BBN0              	100.00%
H2ZVH9              	60.00%		
Bootstrap support for H3B1U6 as seed ortholog is 79%.
Bootstrap support for D3BBN0 as seed ortholog is 99%.

Group of orthologs #637. Best score 355 bits
Score difference with first non-orthologous sequence - L.chalumnae:98 P.pallidum:355

H3ADW2              	100.00%		D3B110              	100.00%
Bootstrap support for H3ADW2 as seed ortholog is 99%.
Bootstrap support for D3B110 as seed ortholog is 100%.

Group of orthologs #638. Best score 355 bits
Score difference with first non-orthologous sequence - L.chalumnae:355 P.pallidum:355

H3B394              	100.00%		D3BTJ5              	100.00%
Bootstrap support for H3B394 as seed ortholog is 100%.
Bootstrap support for D3BTJ5 as seed ortholog is 100%.

Group of orthologs #639. Best score 354 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 P.pallidum:354

H3B2C6              	100.00%		D3BQ91              	100.00%
H3B651              	59.67%		
H3A2R8              	38.21%		
H3BDF5              	37.54%		
H3ACD1              	13.57%		
H3ADV3              	12.22%		
H3BBC6              	11.16%		
H3BIB1              	8.47%		
Bootstrap support for H3B2C6 as seed ortholog is 97%.
Bootstrap support for D3BQ91 as seed ortholog is 100%.

Group of orthologs #640. Best score 354 bits
Score difference with first non-orthologous sequence - L.chalumnae:354 P.pallidum:354

H3AJT7              	100.00%		D3BH77              	100.00%
H3ACG7              	29.68%		
Bootstrap support for H3AJT7 as seed ortholog is 100%.
Bootstrap support for D3BH77 as seed ortholog is 100%.

Group of orthologs #641. Best score 354 bits
Score difference with first non-orthologous sequence - L.chalumnae:354 P.pallidum:287

H3A726              	100.00%		D3BEV9              	100.00%
Bootstrap support for H3A726 as seed ortholog is 100%.
Bootstrap support for D3BEV9 as seed ortholog is 100%.

Group of orthologs #642. Best score 354 bits
Score difference with first non-orthologous sequence - L.chalumnae:354 P.pallidum:354

H3BCB1              	100.00%		D3B913              	100.00%
Bootstrap support for H3BCB1 as seed ortholog is 100%.
Bootstrap support for D3B913 as seed ortholog is 100%.

Group of orthologs #643. Best score 354 bits
Score difference with first non-orthologous sequence - L.chalumnae:354 P.pallidum:233

H3B0C0              	100.00%		D3BV77              	100.00%
Bootstrap support for H3B0C0 as seed ortholog is 100%.
Bootstrap support for D3BV77 as seed ortholog is 100%.

Group of orthologs #644. Best score 353 bits
Score difference with first non-orthologous sequence - L.chalumnae:353 P.pallidum:133

H3BDT3              	100.00%		D3B485              	100.00%
Bootstrap support for H3BDT3 as seed ortholog is 100%.
Bootstrap support for D3B485 as seed ortholog is 100%.

Group of orthologs #645. Best score 353 bits
Score difference with first non-orthologous sequence - L.chalumnae:8 P.pallidum:353

H3BDF6              	100.00%		D3BAL5              	100.00%
Bootstrap support for H3BDF6 as seed ortholog is 56%.
Alternative seed ortholog is M3XJ11 (8 bits away from this cluster)
Bootstrap support for D3BAL5 as seed ortholog is 100%.

Group of orthologs #646. Best score 352 bits
Score difference with first non-orthologous sequence - L.chalumnae:250 P.pallidum:352

H2ZVB2              	100.00%		D3B4D7              	100.00%
Bootstrap support for H2ZVB2 as seed ortholog is 100%.
Bootstrap support for D3B4D7 as seed ortholog is 100%.

Group of orthologs #647. Best score 352 bits
Score difference with first non-orthologous sequence - L.chalumnae:218 P.pallidum:228

H3BB10              	100.00%		D3B6D9              	100.00%
Bootstrap support for H3BB10 as seed ortholog is 100%.
Bootstrap support for D3B6D9 as seed ortholog is 100%.

Group of orthologs #648. Best score 352 bits
Score difference with first non-orthologous sequence - L.chalumnae:216 P.pallidum:184

H3ARV6              	100.00%		D3BPU6              	100.00%
Bootstrap support for H3ARV6 as seed ortholog is 100%.
Bootstrap support for D3BPU6 as seed ortholog is 99%.

Group of orthologs #649. Best score 351 bits
Score difference with first non-orthologous sequence - L.chalumnae:351 P.pallidum:351

H3A5W1              	100.00%		D3AY60              	100.00%
H2ZX12              	45.99%		
H2ZXC7              	32.82%		
Bootstrap support for H3A5W1 as seed ortholog is 100%.
Bootstrap support for D3AY60 as seed ortholog is 100%.

Group of orthologs #650. Best score 351 bits
Score difference with first non-orthologous sequence - L.chalumnae:351 P.pallidum:351

H3BDX4              	100.00%		D3BV09              	100.00%
H3ADT7              	17.97%		
Bootstrap support for H3BDX4 as seed ortholog is 100%.
Bootstrap support for D3BV09 as seed ortholog is 100%.

Group of orthologs #651. Best score 351 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.pallidum:351

H2ZWI0              	100.00%		D3BN56              	100.00%
Bootstrap support for H2ZWI0 as seed ortholog is 100%.
Bootstrap support for D3BN56 as seed ortholog is 100%.

Group of orthologs #652. Best score 351 bits
Score difference with first non-orthologous sequence - L.chalumnae:351 P.pallidum:351

H3AWI5              	100.00%		D3B886              	100.00%
Bootstrap support for H3AWI5 as seed ortholog is 100%.
Bootstrap support for D3B886 as seed ortholog is 100%.

Group of orthologs #653. Best score 350 bits
Score difference with first non-orthologous sequence - L.chalumnae:141 P.pallidum:194

H3A8J7              	100.00%		D3BM48              	100.00%
Bootstrap support for H3A8J7 as seed ortholog is 99%.
Bootstrap support for D3BM48 as seed ortholog is 99%.

Group of orthologs #654. Best score 350 bits
Score difference with first non-orthologous sequence - L.chalumnae:350 P.pallidum:350

H3BEI1              	100.00%		D3B3W9              	100.00%
Bootstrap support for H3BEI1 as seed ortholog is 100%.
Bootstrap support for D3B3W9 as seed ortholog is 100%.

Group of orthologs #655. Best score 350 bits
Score difference with first non-orthologous sequence - L.chalumnae:350 P.pallidum:350

H3AUQ6              	100.00%		D3BRL6              	100.00%
Bootstrap support for H3AUQ6 as seed ortholog is 100%.
Bootstrap support for D3BRL6 as seed ortholog is 100%.

Group of orthologs #656. Best score 349 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 P.pallidum:279

H2ZZV4              	100.00%		D3B9R3              	100.00%
H3B4C1              	32.97%		
H3B1M9              	5.90%		
Bootstrap support for H2ZZV4 as seed ortholog is 93%.
Bootstrap support for D3B9R3 as seed ortholog is 100%.

Group of orthologs #657. Best score 349 bits
Score difference with first non-orthologous sequence - L.chalumnae:349 P.pallidum:349

H3APQ8              	100.00%		D3B0Y0              	100.00%
Bootstrap support for H3APQ8 as seed ortholog is 100%.
Bootstrap support for D3B0Y0 as seed ortholog is 100%.

Group of orthologs #658. Best score 349 bits
Score difference with first non-orthologous sequence - L.chalumnae:349 P.pallidum:349

H3AV89              	100.00%		D3AXK7              	100.00%
Bootstrap support for H3AV89 as seed ortholog is 100%.
Bootstrap support for D3AXK7 as seed ortholog is 100%.

Group of orthologs #659. Best score 349 bits
Score difference with first non-orthologous sequence - L.chalumnae:349 P.pallidum:349

H3AQB8              	100.00%		D3B6K6              	100.00%
Bootstrap support for H3AQB8 as seed ortholog is 100%.
Bootstrap support for D3B6K6 as seed ortholog is 100%.

Group of orthologs #660. Best score 349 bits
Score difference with first non-orthologous sequence - L.chalumnae:349 P.pallidum:349

H3ARN5              	100.00%		D3BAR7              	100.00%
Bootstrap support for H3ARN5 as seed ortholog is 100%.
Bootstrap support for D3BAR7 as seed ortholog is 100%.

Group of orthologs #661. Best score 348 bits
Score difference with first non-orthologous sequence - L.chalumnae:348 P.pallidum:348

H3A560              	100.00%		D3AZD2              	100.00%
Bootstrap support for H3A560 as seed ortholog is 100%.
Bootstrap support for D3AZD2 as seed ortholog is 100%.

Group of orthologs #662. Best score 348 bits
Score difference with first non-orthologous sequence - L.chalumnae:226 P.pallidum:81

H3BBW4              	100.00%		D3B5M6              	100.00%
Bootstrap support for H3BBW4 as seed ortholog is 100%.
Bootstrap support for D3B5M6 as seed ortholog is 93%.

Group of orthologs #663. Best score 348 bits
Score difference with first non-orthologous sequence - L.chalumnae:239 P.pallidum:163

H3B7X9              	100.00%		D3BAC1              	100.00%
Bootstrap support for H3B7X9 as seed ortholog is 100%.
Bootstrap support for D3BAC1 as seed ortholog is 99%.

Group of orthologs #664. Best score 347 bits
Score difference with first non-orthologous sequence - L.chalumnae:347 P.pallidum:347

H2ZXG4              	100.00%		D3BKN6              	100.00%
Bootstrap support for H2ZXG4 as seed ortholog is 100%.
Bootstrap support for D3BKN6 as seed ortholog is 100%.

Group of orthologs #665. Best score 347 bits
Score difference with first non-orthologous sequence - L.chalumnae:347 P.pallidum:347

H3AKV5              	100.00%		D3B3Z0              	100.00%
Bootstrap support for H3AKV5 as seed ortholog is 100%.
Bootstrap support for D3B3Z0 as seed ortholog is 100%.

Group of orthologs #666. Best score 347 bits
Score difference with first non-orthologous sequence - L.chalumnae:347 P.pallidum:347

H3AN50              	100.00%		D3BEZ3              	100.00%
Bootstrap support for H3AN50 as seed ortholog is 100%.
Bootstrap support for D3BEZ3 as seed ortholog is 100%.

Group of orthologs #667. Best score 347 bits
Score difference with first non-orthologous sequence - L.chalumnae:347 P.pallidum:347

H3AHH4              	100.00%		D3BKM5              	100.00%
Bootstrap support for H3AHH4 as seed ortholog is 100%.
Bootstrap support for D3BKM5 as seed ortholog is 100%.

Group of orthologs #668. Best score 346 bits
Score difference with first non-orthologous sequence - L.chalumnae:19 P.pallidum:166

H3AMX9              	100.00%		D3B8W9              	100.00%
H3AA30              	55.68%		
M3XII0              	22.55%		
Bootstrap support for H3AMX9 as seed ortholog is 62%.
Alternative seed ortholog is H3ABD5 (19 bits away from this cluster)
Bootstrap support for D3B8W9 as seed ortholog is 99%.

Group of orthologs #669. Best score 346 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 P.pallidum:186

H3B947              	100.00%		D3B839              	100.00%
H2ZV04              	18.34%		
H3B4Y9              	12.16%		
Bootstrap support for H3B947 as seed ortholog is 100%.
Bootstrap support for D3B839 as seed ortholog is 100%.

Group of orthologs #670. Best score 346 bits
Score difference with first non-orthologous sequence - L.chalumnae:43 P.pallidum:346

M3XJE9              	100.00%		D3B8S4              	100.00%
H2ZYJ6              	28.34%		
Bootstrap support for M3XJE9 as seed ortholog is 83%.
Bootstrap support for D3B8S4 as seed ortholog is 100%.

Group of orthologs #671. Best score 346 bits
Score difference with first non-orthologous sequence - L.chalumnae:346 P.pallidum:346

H3AAQ4              	100.00%		D3BII8              	100.00%
Bootstrap support for H3AAQ4 as seed ortholog is 100%.
Bootstrap support for D3BII8 as seed ortholog is 100%.

Group of orthologs #672. Best score 346 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 P.pallidum:94

H3B4U4              	100.00%		D3B158              	100.00%
Bootstrap support for H3B4U4 as seed ortholog is 95%.
Bootstrap support for D3B158 as seed ortholog is 97%.

Group of orthologs #673. Best score 346 bits
Score difference with first non-orthologous sequence - L.chalumnae:346 P.pallidum:346

H3AHF7              	100.00%		D3BLV1              	100.00%
Bootstrap support for H3AHF7 as seed ortholog is 100%.
Bootstrap support for D3BLV1 as seed ortholog is 100%.

Group of orthologs #674. Best score 346 bits
Score difference with first non-orthologous sequence - L.chalumnae:120 P.pallidum:346

H3BGM6              	100.00%		D3BRI1              	100.00%
Bootstrap support for H3BGM6 as seed ortholog is 98%.
Bootstrap support for D3BRI1 as seed ortholog is 100%.

Group of orthologs #675. Best score 345 bits
Score difference with first non-orthologous sequence - L.chalumnae:345 P.pallidum:345

H3BA13              	100.00%		D3BD56              	100.00%
H3A441              	51.49%		
H3B9F4              	23.96%		
Bootstrap support for H3BA13 as seed ortholog is 100%.
Bootstrap support for D3BD56 as seed ortholog is 100%.

Group of orthologs #676. Best score 344 bits
Score difference with first non-orthologous sequence - L.chalumnae:344 P.pallidum:344

H2ZVD5              	100.00%		D3AXN2              	100.00%
H3ATL4              	58.11%		
Bootstrap support for H2ZVD5 as seed ortholog is 100%.
Bootstrap support for D3AXN2 as seed ortholog is 100%.

Group of orthologs #677. Best score 344 bits
Score difference with first non-orthologous sequence - L.chalumnae:344 P.pallidum:344

H3A2N7              	100.00%		D3BEC7              	100.00%
Bootstrap support for H3A2N7 as seed ortholog is 100%.
Bootstrap support for D3BEC7 as seed ortholog is 100%.

Group of orthologs #678. Best score 344 bits
Score difference with first non-orthologous sequence - L.chalumnae:344 P.pallidum:344

H3B1N8              	100.00%		D3AZD8              	100.00%
Bootstrap support for H3B1N8 as seed ortholog is 100%.
Bootstrap support for D3AZD8 as seed ortholog is 100%.

Group of orthologs #679. Best score 343 bits
Score difference with first non-orthologous sequence - L.chalumnae:343 P.pallidum:343

H2ZWM9              	100.00%		D3B418              	100.00%
Bootstrap support for H2ZWM9 as seed ortholog is 100%.
Bootstrap support for D3B418 as seed ortholog is 100%.

Group of orthologs #680. Best score 343 bits
Score difference with first non-orthologous sequence - L.chalumnae:197 P.pallidum:343

H3A134              	100.00%		D3BNN4              	100.00%
Bootstrap support for H3A134 as seed ortholog is 100%.
Bootstrap support for D3BNN4 as seed ortholog is 100%.

Group of orthologs #681. Best score 343 bits
Score difference with first non-orthologous sequence - L.chalumnae:343 P.pallidum:343

H3A0A5              	100.00%		D3BQ29              	100.00%
Bootstrap support for H3A0A5 as seed ortholog is 100%.
Bootstrap support for D3BQ29 as seed ortholog is 100%.

Group of orthologs #682. Best score 342 bits
Score difference with first non-orthologous sequence - L.chalumnae:342 P.pallidum:342

H3B3B5              	100.00%		D3BN39              	100.00%
H3ABW4              	55.36%		
Bootstrap support for H3B3B5 as seed ortholog is 100%.
Bootstrap support for D3BN39 as seed ortholog is 100%.

Group of orthologs #683. Best score 342 bits
Score difference with first non-orthologous sequence - L.chalumnae:342 P.pallidum:342

H3AZH8              	100.00%		D3B6G8              	100.00%
Bootstrap support for H3AZH8 as seed ortholog is 100%.
Bootstrap support for D3B6G8 as seed ortholog is 100%.

Group of orthologs #684. Best score 342 bits
Score difference with first non-orthologous sequence - L.chalumnae:342 P.pallidum:342

H3B6A1              	100.00%		D3BKF9              	100.00%
Bootstrap support for H3B6A1 as seed ortholog is 100%.
Bootstrap support for D3BKF9 as seed ortholog is 100%.

Group of orthologs #685. Best score 341 bits
Score difference with first non-orthologous sequence - L.chalumnae:341 P.pallidum:341

H3AEL6              	100.00%		D3AY97              	100.00%
Bootstrap support for H3AEL6 as seed ortholog is 100%.
Bootstrap support for D3AY97 as seed ortholog is 100%.

Group of orthologs #686. Best score 341 bits
Score difference with first non-orthologous sequence - L.chalumnae:341 P.pallidum:341

H3A450              	100.00%		D3BS65              	100.00%
Bootstrap support for H3A450 as seed ortholog is 100%.
Bootstrap support for D3BS65 as seed ortholog is 100%.

Group of orthologs #687. Best score 341 bits
Score difference with first non-orthologous sequence - L.chalumnae:295 P.pallidum:341

H3BBL3              	100.00%		D3B3A5              	100.00%
Bootstrap support for H3BBL3 as seed ortholog is 100%.
Bootstrap support for D3B3A5 as seed ortholog is 100%.

Group of orthologs #688. Best score 340 bits
Score difference with first non-orthologous sequence - L.chalumnae:340 P.pallidum:340

H3B744              	100.00%		D3AWX8              	100.00%
H3AMZ6              	33.72%		
Bootstrap support for H3B744 as seed ortholog is 100%.
Bootstrap support for D3AWX8 as seed ortholog is 100%.

Group of orthologs #689. Best score 340 bits
Score difference with first non-orthologous sequence - L.chalumnae:340 P.pallidum:340

H3B9I9              	100.00%		D3AY66              	100.00%
Bootstrap support for H3B9I9 as seed ortholog is 100%.
Bootstrap support for D3AY66 as seed ortholog is 100%.

Group of orthologs #690. Best score 340 bits
Score difference with first non-orthologous sequence - L.chalumnae:238 P.pallidum:340

M3XHM2              	100.00%		D3B3A9              	100.00%
Bootstrap support for M3XHM2 as seed ortholog is 100%.
Bootstrap support for D3B3A9 as seed ortholog is 100%.

Group of orthologs #691. Best score 339 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 P.pallidum:4

H3A4B4              	100.00%		D3AZ27              	100.00%
H3AGU5              	61.69%		D3AZ45              	68.21%
H3ACW4              	26.45%		D3BFZ3              	67.94%
H3B9V0              	9.01%		D3BPN8              	42.63%
H2ZSA4              	7.08%		D3BS52              	16.38%
                    	       		D3BLL1              	12.91%
                    	       		D3BI50              	12.29%
                    	       		D3AZ03              	7.18%
Bootstrap support for H3A4B4 as seed ortholog is 98%.
Bootstrap support for D3AZ27 as seed ortholog is 52%.
Alternative seed ortholog is D3B7X1 (4 bits away from this cluster)

Group of orthologs #692. Best score 339 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 P.pallidum:36

H3ANI9              	100.00%		D3B5R2              	100.00%
H3AND5              	65.18%		
Bootstrap support for H3ANI9 as seed ortholog is 99%.
Bootstrap support for D3B5R2 as seed ortholog is 95%.

Group of orthologs #693. Best score 339 bits
Score difference with first non-orthologous sequence - L.chalumnae:339 P.pallidum:339

H2ZWW2              	100.00%		D3AZT7              	100.00%
Bootstrap support for H2ZWW2 as seed ortholog is 100%.
Bootstrap support for D3AZT7 as seed ortholog is 100%.

Group of orthologs #694. Best score 339 bits
Score difference with first non-orthologous sequence - L.chalumnae:339 P.pallidum:339

H2ZTP2              	100.00%		D3BSM1              	100.00%
Bootstrap support for H2ZTP2 as seed ortholog is 100%.
Bootstrap support for D3BSM1 as seed ortholog is 100%.

Group of orthologs #695. Best score 338 bits
Score difference with first non-orthologous sequence - L.chalumnae:338 P.pallidum:338

H3A3T5              	100.00%		D3AYT4              	100.00%
                    	       		D3AYT5              	66.05%
Bootstrap support for H3A3T5 as seed ortholog is 100%.
Bootstrap support for D3AYT4 as seed ortholog is 100%.

Group of orthologs #696. Best score 338 bits
Score difference with first non-orthologous sequence - L.chalumnae:338 P.pallidum:39

H2ZXK3              	100.00%		D3B9D8              	100.00%
Bootstrap support for H2ZXK3 as seed ortholog is 100%.
Bootstrap support for D3B9D8 as seed ortholog is 66%.
Alternative seed ortholog is D3B0A3 (39 bits away from this cluster)

Group of orthologs #697. Best score 338 bits
Score difference with first non-orthologous sequence - L.chalumnae:35 P.pallidum:338

H2ZZ69              	100.00%		D3BNZ1              	100.00%
Bootstrap support for H2ZZ69 as seed ortholog is 70%.
Alternative seed ortholog is H3BFM5 (35 bits away from this cluster)
Bootstrap support for D3BNZ1 as seed ortholog is 100%.

Group of orthologs #698. Best score 338 bits
Score difference with first non-orthologous sequence - L.chalumnae:192 P.pallidum:236

H3BI16              	100.00%		D3BQQ3              	100.00%
Bootstrap support for H3BI16 as seed ortholog is 99%.
Bootstrap support for D3BQQ3 as seed ortholog is 100%.

Group of orthologs #699. Best score 337 bits
Score difference with first non-orthologous sequence - L.chalumnae:337 P.pallidum:337

H3A192              	100.00%		D3BSC0              	100.00%
H3BIG5              	49.68%		
H3AF86              	49.10%		
H3B3I0              	12.04%		
H3A063              	11.91%		
H3B2J1              	7.81%		
Bootstrap support for H3A192 as seed ortholog is 100%.
Bootstrap support for D3BSC0 as seed ortholog is 100%.

Group of orthologs #700. Best score 337 bits
Score difference with first non-orthologous sequence - L.chalumnae:337 P.pallidum:289

H3BD09              	100.00%		D3B1Q0              	100.00%
H3B049              	27.13%		
Bootstrap support for H3BD09 as seed ortholog is 100%.
Bootstrap support for D3B1Q0 as seed ortholog is 100%.

Group of orthologs #701. Best score 337 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 P.pallidum:337

H3BGC0              	100.00%		D3B2I6              	100.00%
H2ZZ65              	9.63%		
Bootstrap support for H3BGC0 as seed ortholog is 63%.
Alternative seed ortholog is H2ZWN7 (47 bits away from this cluster)
Bootstrap support for D3B2I6 as seed ortholog is 100%.

Group of orthologs #702. Best score 337 bits
Score difference with first non-orthologous sequence - L.chalumnae:337 P.pallidum:337

H3AFR1              	100.00%		D3BLH6              	100.00%
Bootstrap support for H3AFR1 as seed ortholog is 100%.
Bootstrap support for D3BLH6 as seed ortholog is 100%.

Group of orthologs #703. Best score 336 bits
Score difference with first non-orthologous sequence - L.chalumnae:183 P.pallidum:126

H3AGW5              	100.00%		D3BSW5              	100.00%
H3A4Z0              	43.24%		
H3AFP8              	7.16%		
H3ACZ7              	5.70%		
Bootstrap support for H3AGW5 as seed ortholog is 100%.
Bootstrap support for D3BSW5 as seed ortholog is 99%.

Group of orthologs #704. Best score 336 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 P.pallidum:35

H3AMB7              	100.00%		D3BDA2              	100.00%
H2ZVB0              	18.25%		
H3A5I8              	18.25%		
Bootstrap support for H3AMB7 as seed ortholog is 91%.
Bootstrap support for D3BDA2 as seed ortholog is 76%.

Group of orthologs #705. Best score 336 bits
Score difference with first non-orthologous sequence - L.chalumnae:336 P.pallidum:336

H3ACQ1              	100.00%		D3BV31              	100.00%
H3A2M6              	10.27%		
Bootstrap support for H3ACQ1 as seed ortholog is 100%.
Bootstrap support for D3BV31 as seed ortholog is 100%.

Group of orthologs #706. Best score 335 bits
Score difference with first non-orthologous sequence - L.chalumnae:335 P.pallidum:335

H3BG06              	100.00%		D3BT14              	100.00%
H3A6Q5              	62.13%		
H3B5P0              	60.31%		
Bootstrap support for H3BG06 as seed ortholog is 100%.
Bootstrap support for D3BT14 as seed ortholog is 100%.

Group of orthologs #707. Best score 335 bits
Score difference with first non-orthologous sequence - L.chalumnae:199 P.pallidum:335

H3A030              	100.00%		D3BRV0              	100.00%
Bootstrap support for H3A030 as seed ortholog is 100%.
Bootstrap support for D3BRV0 as seed ortholog is 100%.

Group of orthologs #708. Best score 335 bits
Score difference with first non-orthologous sequence - L.chalumnae:242 P.pallidum:335

H3B3T1              	100.00%		D3AVI8              	100.00%
Bootstrap support for H3B3T1 as seed ortholog is 99%.
Bootstrap support for D3AVI8 as seed ortholog is 100%.

Group of orthologs #709. Best score 335 bits
Score difference with first non-orthologous sequence - L.chalumnae:242 P.pallidum:335

H3B444              	100.00%		D3B9R2              	100.00%
Bootstrap support for H3B444 as seed ortholog is 100%.
Bootstrap support for D3B9R2 as seed ortholog is 100%.

Group of orthologs #710. Best score 334 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 P.pallidum:85

H3AGL2              	100.00%		D3BLH1              	100.00%
H3BHF8              	21.61%		
Bootstrap support for H3AGL2 as seed ortholog is 87%.
Bootstrap support for D3BLH1 as seed ortholog is 74%.
Alternative seed ortholog is D3B5Q6 (85 bits away from this cluster)

Group of orthologs #711. Best score 334 bits
Score difference with first non-orthologous sequence - L.chalumnae:334 P.pallidum:334

H2ZV09              	100.00%		D3B6L9              	100.00%
Bootstrap support for H2ZV09 as seed ortholog is 100%.
Bootstrap support for D3B6L9 as seed ortholog is 100%.

Group of orthologs #712. Best score 334 bits
Score difference with first non-orthologous sequence - L.chalumnae:334 P.pallidum:92

H3A5F7              	100.00%		D3AYG8              	100.00%
Bootstrap support for H3A5F7 as seed ortholog is 100%.
Bootstrap support for D3AYG8 as seed ortholog is 96%.

Group of orthologs #713. Best score 334 bits
Score difference with first non-orthologous sequence - L.chalumnae:334 P.pallidum:334

H3AR85              	100.00%		D3BM29              	100.00%
Bootstrap support for H3AR85 as seed ortholog is 100%.
Bootstrap support for D3BM29 as seed ortholog is 100%.

Group of orthologs #714. Best score 332 bits
Score difference with first non-orthologous sequence - L.chalumnae:13 P.pallidum:65

H2ZVZ1              	100.00%		D3BIR2              	100.00%
H3A2Y5              	41.72%		
H3AHX5              	39.16%		
H2ZUF7              	35.43%		
Bootstrap support for H2ZVZ1 as seed ortholog is 60%.
Alternative seed ortholog is H3AV14 (13 bits away from this cluster)
Bootstrap support for D3BIR2 as seed ortholog is 94%.

Group of orthologs #715. Best score 332 bits
Score difference with first non-orthologous sequence - L.chalumnae:228 P.pallidum:332

H3ATY0              	100.00%		D3BA94              	100.00%
H3B8N1              	47.67%		
Bootstrap support for H3ATY0 as seed ortholog is 99%.
Bootstrap support for D3BA94 as seed ortholog is 100%.

Group of orthologs #716. Best score 332 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 P.pallidum:77

H3B108              	100.00%		D3B280              	100.00%
Bootstrap support for H3B108 as seed ortholog is 95%.
Bootstrap support for D3B280 as seed ortholog is 99%.

Group of orthologs #717. Best score 332 bits
Score difference with first non-orthologous sequence - L.chalumnae:170 P.pallidum:332

H3B0A8              	100.00%		D3B5L4              	100.00%
Bootstrap support for H3B0A8 as seed ortholog is 99%.
Bootstrap support for D3B5L4 as seed ortholog is 100%.

Group of orthologs #718. Best score 331 bits
Score difference with first non-orthologous sequence - L.chalumnae:331 P.pallidum:257

H3AV29              	100.00%		D3B8C8              	100.00%
H3BGR0              	51.54%		
H2ZXF5              	34.76%		
Bootstrap support for H3AV29 as seed ortholog is 100%.
Bootstrap support for D3B8C8 as seed ortholog is 100%.

Group of orthologs #719. Best score 331 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 P.pallidum:34

H3AZG1              	100.00%		D3BKF3              	100.00%
H3A9B4              	9.23%		
Bootstrap support for H3AZG1 as seed ortholog is 99%.
Bootstrap support for D3BKF3 as seed ortholog is 94%.

Group of orthologs #720. Best score 331 bits
Score difference with first non-orthologous sequence - L.chalumnae:227 P.pallidum:331

H3BB41              	100.00%		D3AWT2              	100.00%
Bootstrap support for H3BB41 as seed ortholog is 100%.
Bootstrap support for D3AWT2 as seed ortholog is 100%.

Group of orthologs #721. Best score 331 bits
Score difference with first non-orthologous sequence - L.chalumnae:331 P.pallidum:331

H3AS40              	100.00%		D3BQE1              	100.00%
Bootstrap support for H3AS40 as seed ortholog is 100%.
Bootstrap support for D3BQE1 as seed ortholog is 100%.

Group of orthologs #722. Best score 331 bits
Score difference with first non-orthologous sequence - L.chalumnae:331 P.pallidum:331

M3XK43              	100.00%		D3B6J5              	100.00%
Bootstrap support for M3XK43 as seed ortholog is 100%.
Bootstrap support for D3B6J5 as seed ortholog is 100%.

Group of orthologs #723. Best score 330 bits
Score difference with first non-orthologous sequence - L.chalumnae:330 P.pallidum:66

H3AE45              	100.00%		D3B433              	100.00%
Bootstrap support for H3AE45 as seed ortholog is 100%.
Bootstrap support for D3B433 as seed ortholog is 94%.

Group of orthologs #724. Best score 330 bits
Score difference with first non-orthologous sequence - L.chalumnae:330 P.pallidum:330

H3AM93              	100.00%		D3BNP6              	100.00%
Bootstrap support for H3AM93 as seed ortholog is 100%.
Bootstrap support for D3BNP6 as seed ortholog is 100%.

Group of orthologs #725. Best score 329 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 P.pallidum:329

H2ZX60              	100.00%		D3AXZ6              	100.00%
H3BD00              	26.50%		
H3A386              	17.67%		
Bootstrap support for H2ZX60 as seed ortholog is 99%.
Bootstrap support for D3AXZ6 as seed ortholog is 100%.

Group of orthologs #726. Best score 329 bits
Score difference with first non-orthologous sequence - L.chalumnae:329 P.pallidum:329

H3A6L1              	100.00%		D3B1M6              	100.00%
Bootstrap support for H3A6L1 as seed ortholog is 100%.
Bootstrap support for D3B1M6 as seed ortholog is 100%.

Group of orthologs #727. Best score 329 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.pallidum:329

H3A3B4              	100.00%		D3B7J9              	100.00%
Bootstrap support for H3A3B4 as seed ortholog is 85%.
Bootstrap support for D3B7J9 as seed ortholog is 100%.

Group of orthologs #728. Best score 329 bits
Score difference with first non-orthologous sequence - L.chalumnae:247 P.pallidum:329

H3AFS1              	100.00%		D3AYV5              	100.00%
Bootstrap support for H3AFS1 as seed ortholog is 100%.
Bootstrap support for D3AYV5 as seed ortholog is 100%.

Group of orthologs #729. Best score 328 bits
Score difference with first non-orthologous sequence - L.chalumnae:328 P.pallidum:71

H3AJ39              	100.00%		D3B3W3              	100.00%
H3BIN2              	61.96%		
H3A5F3              	51.89%		
Bootstrap support for H3AJ39 as seed ortholog is 100%.
Bootstrap support for D3B3W3 as seed ortholog is 32%.
Alternative seed ortholog is D3B5Q6 (71 bits away from this cluster)

Group of orthologs #730. Best score 328 bits
Score difference with first non-orthologous sequence - L.chalumnae:328 P.pallidum:328

H3ARL5              	100.00%		D3BQZ8              	100.00%
Bootstrap support for H3ARL5 as seed ortholog is 100%.
Bootstrap support for D3BQZ8 as seed ortholog is 100%.

Group of orthologs #731. Best score 328 bits
Score difference with first non-orthologous sequence - L.chalumnae:202 P.pallidum:206

H3B607              	100.00%		D3BH20              	100.00%
Bootstrap support for H3B607 as seed ortholog is 100%.
Bootstrap support for D3BH20 as seed ortholog is 100%.

Group of orthologs #732. Best score 327 bits
Score difference with first non-orthologous sequence - L.chalumnae:327 P.pallidum:327

H3A5P1              	100.00%		D3B632              	100.00%
Bootstrap support for H3A5P1 as seed ortholog is 100%.
Bootstrap support for D3B632 as seed ortholog is 100%.

Group of orthologs #733. Best score 326 bits
Score difference with first non-orthologous sequence - L.chalumnae:326 P.pallidum:326

H3A5V5              	100.00%		D3BNE7              	100.00%
H3AF20              	28.70%		
Bootstrap support for H3A5V5 as seed ortholog is 100%.
Bootstrap support for D3BNE7 as seed ortholog is 100%.

Group of orthologs #734. Best score 326 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 P.pallidum:202

H3ARJ1              	100.00%		D3BER0              	100.00%
H3AA47              	26.91%		
Bootstrap support for H3ARJ1 as seed ortholog is 99%.
Bootstrap support for D3BER0 as seed ortholog is 100%.

Group of orthologs #735. Best score 326 bits
Score difference with first non-orthologous sequence - L.chalumnae:326 P.pallidum:326

H3A4A4              	100.00%		D3AVQ5              	100.00%
Bootstrap support for H3A4A4 as seed ortholog is 100%.
Bootstrap support for D3AVQ5 as seed ortholog is 100%.

Group of orthologs #736. Best score 326 bits
Score difference with first non-orthologous sequence - L.chalumnae:326 P.pallidum:326

H3B4Y5              	100.00%		D3BGC0              	100.00%
Bootstrap support for H3B4Y5 as seed ortholog is 100%.
Bootstrap support for D3BGC0 as seed ortholog is 100%.

Group of orthologs #737. Best score 325 bits
Score difference with first non-orthologous sequence - L.chalumnae:325 P.pallidum:325

H3BHF1              	100.00%		D3BRX2              	100.00%
H3BFA5              	29.06%		
H3AEE9              	25.27%		
Bootstrap support for H3BHF1 as seed ortholog is 100%.
Bootstrap support for D3BRX2 as seed ortholog is 100%.

Group of orthologs #738. Best score 325 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 P.pallidum:258

H3B6P9              	100.00%		D3B1Q6              	100.00%
Bootstrap support for H3B6P9 as seed ortholog is 99%.
Bootstrap support for D3B1Q6 as seed ortholog is 100%.

Group of orthologs #739. Best score 324 bits
Score difference with first non-orthologous sequence - L.chalumnae:324 P.pallidum:46

H3AS50              	100.00%		D3AZQ1              	100.00%
H3AGE7              	49.70%		
Bootstrap support for H3AS50 as seed ortholog is 100%.
Bootstrap support for D3AZQ1 as seed ortholog is 82%.

Group of orthologs #740. Best score 324 bits
Score difference with first non-orthologous sequence - L.chalumnae:324 P.pallidum:324

H3AE01              	100.00%		D3AZG7              	100.00%
Bootstrap support for H3AE01 as seed ortholog is 100%.
Bootstrap support for D3AZG7 as seed ortholog is 100%.

Group of orthologs #741. Best score 324 bits
Score difference with first non-orthologous sequence - L.chalumnae:253 P.pallidum:271

H3AVJ8              	100.00%		D3BR13              	100.00%
Bootstrap support for H3AVJ8 as seed ortholog is 100%.
Bootstrap support for D3BR13 as seed ortholog is 96%.

Group of orthologs #742. Best score 324 bits
Score difference with first non-orthologous sequence - L.chalumnae:324 P.pallidum:324

H3BFD2              	100.00%		D3BRC0              	100.00%
Bootstrap support for H3BFD2 as seed ortholog is 100%.
Bootstrap support for D3BRC0 as seed ortholog is 100%.

Group of orthologs #743. Best score 323 bits
Score difference with first non-orthologous sequence - L.chalumnae:323 P.pallidum:71

H3AAJ1              	100.00%		D3B3L6              	100.00%
                    	       		D3BKX9              	30.72%
                    	       		D3B3L7              	27.81%
Bootstrap support for H3AAJ1 as seed ortholog is 100%.
Bootstrap support for D3B3L6 as seed ortholog is 91%.

Group of orthologs #744. Best score 323 bits
Score difference with first non-orthologous sequence - L.chalumnae:323 P.pallidum:323

H3AS58              	100.00%		D3B8T4              	100.00%
H3AF00              	37.27%		
Bootstrap support for H3AS58 as seed ortholog is 100%.
Bootstrap support for D3B8T4 as seed ortholog is 100%.

Group of orthologs #745. Best score 323 bits
Score difference with first non-orthologous sequence - L.chalumnae:323 P.pallidum:323

H2ZVJ5              	100.00%		D3B3M9              	100.00%
Bootstrap support for H2ZVJ5 as seed ortholog is 100%.
Bootstrap support for D3B3M9 as seed ortholog is 100%.

Group of orthologs #746. Best score 323 bits
Score difference with first non-orthologous sequence - L.chalumnae:323 P.pallidum:323

H3A131              	100.00%		D3B1H3              	100.00%
Bootstrap support for H3A131 as seed ortholog is 100%.
Bootstrap support for D3B1H3 as seed ortholog is 100%.

Group of orthologs #747. Best score 323 bits
Score difference with first non-orthologous sequence - L.chalumnae:323 P.pallidum:323

H3ABL2              	100.00%		D3B2J9              	100.00%
Bootstrap support for H3ABL2 as seed ortholog is 100%.
Bootstrap support for D3B2J9 as seed ortholog is 100%.

Group of orthologs #748. Best score 323 bits
Score difference with first non-orthologous sequence - L.chalumnae:323 P.pallidum:323

H3BGW8              	100.00%		D3B4H2              	100.00%
Bootstrap support for H3BGW8 as seed ortholog is 100%.
Bootstrap support for D3B4H2 as seed ortholog is 100%.

Group of orthologs #749. Best score 322 bits
Score difference with first non-orthologous sequence - L.chalumnae:322 P.pallidum:322

H3A9I0              	100.00%		D3BTX1              	100.00%
H3B9G4              	23.76%		
H3ATX4              	17.17%		
Bootstrap support for H3A9I0 as seed ortholog is 100%.
Bootstrap support for D3BTX1 as seed ortholog is 100%.

Group of orthologs #750. Best score 322 bits
Score difference with first non-orthologous sequence - L.chalumnae:322 P.pallidum:211

H3AUX6              	100.00%		D3BPL1              	100.00%
H3AVZ1              	49.78%		
Bootstrap support for H3AUX6 as seed ortholog is 100%.
Bootstrap support for D3BPL1 as seed ortholog is 100%.

Group of orthologs #751. Best score 322 bits
Score difference with first non-orthologous sequence - L.chalumnae:322 P.pallidum:178

H3AE33              	100.00%		D3B7L1              	100.00%
Bootstrap support for H3AE33 as seed ortholog is 100%.
Bootstrap support for D3B7L1 as seed ortholog is 100%.

Group of orthologs #752. Best score 322 bits
Score difference with first non-orthologous sequence - L.chalumnae:322 P.pallidum:322

H3A2W5              	100.00%		D3BR29              	100.00%
Bootstrap support for H3A2W5 as seed ortholog is 100%.
Bootstrap support for D3BR29 as seed ortholog is 100%.

Group of orthologs #753. Best score 322 bits
Score difference with first non-orthologous sequence - L.chalumnae:322 P.pallidum:69

H3B488              	100.00%		D3B3V0              	100.00%
Bootstrap support for H3B488 as seed ortholog is 100%.
Bootstrap support for D3B3V0 as seed ortholog is 93%.

Group of orthologs #754. Best score 322 bits
Score difference with first non-orthologous sequence - L.chalumnae:322 P.pallidum:322

H3AJK3              	100.00%		D3BSU4              	100.00%
Bootstrap support for H3AJK3 as seed ortholog is 100%.
Bootstrap support for D3BSU4 as seed ortholog is 100%.

Group of orthologs #755. Best score 322 bits
Score difference with first non-orthologous sequence - L.chalumnae:322 P.pallidum:322

H3BDC6              	100.00%		D3BBK8              	100.00%
Bootstrap support for H3BDC6 as seed ortholog is 100%.
Bootstrap support for D3BBK8 as seed ortholog is 100%.

Group of orthologs #756. Best score 321 bits
Score difference with first non-orthologous sequence - L.chalumnae:235 P.pallidum:321

M3XJD6              	100.00%		D3BKV2              	100.00%
                    	       		D3BSZ9              	14.73%
Bootstrap support for M3XJD6 as seed ortholog is 100%.
Bootstrap support for D3BKV2 as seed ortholog is 100%.

Group of orthologs #757. Best score 321 bits
Score difference with first non-orthologous sequence - L.chalumnae:260 P.pallidum:88

H3B677              	100.00%		D3B388              	100.00%
Bootstrap support for H3B677 as seed ortholog is 100%.
Bootstrap support for D3B388 as seed ortholog is 99%.

Group of orthologs #758. Best score 320 bits
Score difference with first non-orthologous sequence - L.chalumnae:320 P.pallidum:320

H3A1D6              	100.00%		D3BEP3              	100.00%
H3AKG5              	16.57%		
H2ZZM3              	16.25%		
H3B8W9              	15.48%		
M3XH63              	7.43%		
H3AY77              	6.75%		
H3BF03              	6.34%		
Bootstrap support for H3A1D6 as seed ortholog is 100%.
Bootstrap support for D3BEP3 as seed ortholog is 100%.

Group of orthologs #759. Best score 320 bits
Score difference with first non-orthologous sequence - L.chalumnae:320 P.pallidum:320

H3BDX6              	100.00%		D3B8H4              	100.00%
Bootstrap support for H3BDX6 as seed ortholog is 100%.
Bootstrap support for D3B8H4 as seed ortholog is 100%.

Group of orthologs #760. Best score 320 bits
Score difference with first non-orthologous sequence - L.chalumnae:320 P.pallidum:320

H3BAA1              	100.00%		D3BL83              	100.00%
Bootstrap support for H3BAA1 as seed ortholog is 100%.
Bootstrap support for D3BL83 as seed ortholog is 100%.

Group of orthologs #761. Best score 320 bits
Score difference with first non-orthologous sequence - L.chalumnae:199 P.pallidum:320

H3B6D1              	100.00%		D3BTH5              	100.00%
Bootstrap support for H3B6D1 as seed ortholog is 99%.
Bootstrap support for D3BTH5 as seed ortholog is 100%.

Group of orthologs #762. Best score 319 bits
Score difference with first non-orthologous sequence - L.chalumnae:319 P.pallidum:319

H3B6B2              	100.00%		D3B9M6              	100.00%
H3BAK0              	24.84%		
Bootstrap support for H3B6B2 as seed ortholog is 100%.
Bootstrap support for D3B9M6 as seed ortholog is 100%.

Group of orthologs #763. Best score 319 bits
Score difference with first non-orthologous sequence - L.chalumnae:319 P.pallidum:319

H3A5H3              	100.00%		D3B508              	100.00%
Bootstrap support for H3A5H3 as seed ortholog is 100%.
Bootstrap support for D3B508 as seed ortholog is 100%.

Group of orthologs #764. Best score 318 bits
Score difference with first non-orthologous sequence - L.chalumnae:318 P.pallidum:318

H3A2D2              	100.00%		D3BEM7              	100.00%
H3B815              	28.96%		
Bootstrap support for H3A2D2 as seed ortholog is 100%.
Bootstrap support for D3BEM7 as seed ortholog is 100%.

Group of orthologs #765. Best score 318 bits
Score difference with first non-orthologous sequence - L.chalumnae:318 P.pallidum:318

H3AP34              	100.00%		D3AXN0              	100.00%
H3AR60              	52.27%		
Bootstrap support for H3AP34 as seed ortholog is 100%.
Bootstrap support for D3AXN0 as seed ortholog is 100%.

Group of orthologs #766. Best score 318 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.pallidum:318

H3B8J7              	100.00%		D3BUZ2              	100.00%
H3AWD6              	79.00%		
Bootstrap support for H3B8J7 as seed ortholog is 99%.
Bootstrap support for D3BUZ2 as seed ortholog is 100%.

Group of orthologs #767. Best score 318 bits
Score difference with first non-orthologous sequence - L.chalumnae:318 P.pallidum:318

H3B0Y8              	100.00%		D3BHG0              	100.00%
Bootstrap support for H3B0Y8 as seed ortholog is 100%.
Bootstrap support for D3BHG0 as seed ortholog is 100%.

Group of orthologs #768. Best score 317 bits
Score difference with first non-orthologous sequence - L.chalumnae:317 P.pallidum:317

H2ZSC2              	100.00%		D3BJZ4              	100.00%
Bootstrap support for H2ZSC2 as seed ortholog is 100%.
Bootstrap support for D3BJZ4 as seed ortholog is 100%.

Group of orthologs #769. Best score 317 bits
Score difference with first non-orthologous sequence - L.chalumnae:317 P.pallidum:317

H3AQJ6              	100.00%		D3BCR7              	100.00%
Bootstrap support for H3AQJ6 as seed ortholog is 100%.
Bootstrap support for D3BCR7 as seed ortholog is 100%.

Group of orthologs #770. Best score 317 bits
Score difference with first non-orthologous sequence - L.chalumnae:317 P.pallidum:317

H3AZH1              	100.00%		D3B8S5              	100.00%
Bootstrap support for H3AZH1 as seed ortholog is 100%.
Bootstrap support for D3B8S5 as seed ortholog is 100%.

Group of orthologs #771. Best score 317 bits
Score difference with first non-orthologous sequence - L.chalumnae:317 P.pallidum:317

H3B878              	100.00%		D3BLR1              	100.00%
Bootstrap support for H3B878 as seed ortholog is 100%.
Bootstrap support for D3BLR1 as seed ortholog is 100%.

Group of orthologs #772. Best score 316 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.pallidum:59

H3A5I1              	100.00%		D3BR11              	100.00%
H3A6G7              	23.85%		
H3B3L2              	17.37%		
M3XJF0              	17.29%		
H3AX38              	15.99%		
H3AYL5              	15.21%		
H3A115              	13.14%		
H3BG44              	12.62%		
H3AN20              	6.74%		
Bootstrap support for H3A5I1 as seed ortholog is 88%.
Bootstrap support for D3BR11 as seed ortholog is 85%.

Group of orthologs #773. Best score 316 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 P.pallidum:316

H3BES0              	100.00%		D3B1H4              	100.00%
H3AJ57              	20.26%		
H3ACX0              	16.21%		
Bootstrap support for H3BES0 as seed ortholog is 99%.
Bootstrap support for D3B1H4 as seed ortholog is 100%.

Group of orthologs #774. Best score 316 bits
Score difference with first non-orthologous sequence - L.chalumnae:239 P.pallidum:316

H3ACD5              	100.00%		D3AY02              	100.00%
H3AN34              	28.31%		
Bootstrap support for H3ACD5 as seed ortholog is 99%.
Bootstrap support for D3AY02 as seed ortholog is 100%.

Group of orthologs #775. Best score 316 bits
Score difference with first non-orthologous sequence - L.chalumnae:316 P.pallidum:316

H3AV80              	100.00%		D3B501              	100.00%
H2ZSN5              	54.48%		
Bootstrap support for H3AV80 as seed ortholog is 100%.
Bootstrap support for D3B501 as seed ortholog is 100%.

Group of orthologs #776. Best score 316 bits
Score difference with first non-orthologous sequence - L.chalumnae:316 P.pallidum:316

H3BAY6              	100.00%		D3AXY2              	100.00%
Bootstrap support for H3BAY6 as seed ortholog is 100%.
Bootstrap support for D3AXY2 as seed ortholog is 100%.

Group of orthologs #777. Best score 315 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 P.pallidum:91

H3A365              	100.00%		D3B4Z4              	100.00%
H3AJA4              	63.44%		
H2ZWK8              	51.34%		
Bootstrap support for H3A365 as seed ortholog is 99%.
Bootstrap support for D3B4Z4 as seed ortholog is 98%.

Group of orthologs #778. Best score 315 bits
Score difference with first non-orthologous sequence - L.chalumnae:315 P.pallidum:315

H2ZYS5              	100.00%		D3BI40              	100.00%
Bootstrap support for H2ZYS5 as seed ortholog is 100%.
Bootstrap support for D3BI40 as seed ortholog is 100%.

Group of orthologs #779. Best score 315 bits
Score difference with first non-orthologous sequence - L.chalumnae:315 P.pallidum:315

H3AL64              	100.00%		D3B3C0              	100.00%
Bootstrap support for H3AL64 as seed ortholog is 100%.
Bootstrap support for D3B3C0 as seed ortholog is 100%.

Group of orthologs #780. Best score 315 bits
Score difference with first non-orthologous sequence - L.chalumnae:315 P.pallidum:315

H3AYH0              	100.00%		D3AVN8              	100.00%
Bootstrap support for H3AYH0 as seed ortholog is 100%.
Bootstrap support for D3AVN8 as seed ortholog is 100%.

Group of orthologs #781. Best score 314 bits
Score difference with first non-orthologous sequence - L.chalumnae:314 P.pallidum:314

H3AQB6              	100.00%		D3B8S9              	100.00%
H3B3G1              	39.65%		
H3AU40              	36.41%		
Bootstrap support for H3AQB6 as seed ortholog is 100%.
Bootstrap support for D3B8S9 as seed ortholog is 100%.

Group of orthologs #782. Best score 314 bits
Score difference with first non-orthologous sequence - L.chalumnae:314 P.pallidum:314

H3AU52              	100.00%		D3BM08              	100.00%
H3A6D9              	12.00%		
Bootstrap support for H3AU52 as seed ortholog is 100%.
Bootstrap support for D3BM08 as seed ortholog is 100%.

Group of orthologs #783. Best score 314 bits
Score difference with first non-orthologous sequence - L.chalumnae:212 P.pallidum:245

H3A0W8              	100.00%		D3BTD3              	100.00%
Bootstrap support for H3A0W8 as seed ortholog is 100%.
Bootstrap support for D3BTD3 as seed ortholog is 100%.

Group of orthologs #784. Best score 313 bits
Score difference with first non-orthologous sequence - L.chalumnae:117 P.pallidum:91

H3B1P8              	100.00%		D3B083              	100.00%
H3AU12              	44.68%		D3AWW8              	28.42%
H3AIX7              	29.09%		D3B746              	15.51%
                    	       		D3BGR3              	6.42%
Bootstrap support for H3B1P8 as seed ortholog is 99%.
Bootstrap support for D3B083 as seed ortholog is 98%.

Group of orthologs #785. Best score 313 bits
Score difference with first non-orthologous sequence - L.chalumnae:313 P.pallidum:313

H3B3Q4              	100.00%		D3B7T8              	100.00%
Bootstrap support for H3B3Q4 as seed ortholog is 100%.
Bootstrap support for D3B7T8 as seed ortholog is 100%.

Group of orthologs #786. Best score 313 bits
Score difference with first non-orthologous sequence - L.chalumnae:229 P.pallidum:313

H3BGH2              	100.00%		D3B5D0              	100.00%
Bootstrap support for H3BGH2 as seed ortholog is 100%.
Bootstrap support for D3B5D0 as seed ortholog is 100%.

Group of orthologs #787. Best score 312 bits
Score difference with first non-orthologous sequence - L.chalumnae:6 P.pallidum:79

H3ANL1              	100.00%		D3B3T9              	100.00%
H3BES7              	65.45%		
H3BIB4              	58.18%		
H3BIB3              	21.82%		
Bootstrap support for H3ANL1 as seed ortholog is 61%.
Alternative seed ortholog is H3B6E2 (6 bits away from this cluster)
Bootstrap support for D3B3T9 as seed ortholog is 99%.

Group of orthologs #788. Best score 312 bits
Score difference with first non-orthologous sequence - L.chalumnae:32 P.pallidum:70

H3B4I0              	100.00%		D3B4M8              	100.00%
H3A6F0              	33.51%		
Bootstrap support for H3B4I0 as seed ortholog is 77%.
Bootstrap support for D3B4M8 as seed ortholog is 94%.

Group of orthologs #789. Best score 312 bits
Score difference with first non-orthologous sequence - L.chalumnae:30 P.pallidum:312

H3ASX0              	100.00%		D3AZ82              	100.00%
Bootstrap support for H3ASX0 as seed ortholog is 83%.
Bootstrap support for D3AZ82 as seed ortholog is 100%.

Group of orthologs #790. Best score 312 bits
Score difference with first non-orthologous sequence - L.chalumnae:312 P.pallidum:312

H3AUX9              	100.00%		D3B4P3              	100.00%
Bootstrap support for H3AUX9 as seed ortholog is 100%.
Bootstrap support for D3B4P3 as seed ortholog is 100%.

Group of orthologs #791. Best score 312 bits
Score difference with first non-orthologous sequence - L.chalumnae:312 P.pallidum:312

H3BCU7              	100.00%		D3AYA9              	100.00%
Bootstrap support for H3BCU7 as seed ortholog is 100%.
Bootstrap support for D3AYA9 as seed ortholog is 100%.

Group of orthologs #792. Best score 312 bits
Score difference with first non-orthologous sequence - L.chalumnae:70 P.pallidum:101

H3BBX6              	100.00%		D3BDH0              	100.00%
Bootstrap support for H3BBX6 as seed ortholog is 99%.
Bootstrap support for D3BDH0 as seed ortholog is 99%.

Group of orthologs #793. Best score 312 bits
Score difference with first non-orthologous sequence - L.chalumnae:312 P.pallidum:312

H3B7D2              	100.00%		D3BI13              	100.00%
Bootstrap support for H3B7D2 as seed ortholog is 100%.
Bootstrap support for D3BI13 as seed ortholog is 100%.

Group of orthologs #794. Best score 311 bits
Score difference with first non-orthologous sequence - L.chalumnae:22 P.pallidum:311

H2ZVH7              	100.00%		D3AVJ4              	100.00%
                    	       		D3BTH8              	13.09%
Bootstrap support for H2ZVH7 as seed ortholog is 73%.
Alternative seed ortholog is H3B1T1 (22 bits away from this cluster)
Bootstrap support for D3AVJ4 as seed ortholog is 100%.

Group of orthologs #795. Best score 311 bits
Score difference with first non-orthologous sequence - L.chalumnae:311 P.pallidum:311

H2ZSC8              	100.00%		D3BT59              	100.00%
H3AA89              	54.05%		
Bootstrap support for H2ZSC8 as seed ortholog is 100%.
Bootstrap support for D3BT59 as seed ortholog is 100%.

Group of orthologs #796. Best score 311 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 P.pallidum:131

H3AK24              	100.00%		D3BUX2              	100.00%
H3B7M8              	49.09%		
Bootstrap support for H3AK24 as seed ortholog is 99%.
Bootstrap support for D3BUX2 as seed ortholog is 100%.

Group of orthologs #797. Best score 311 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 P.pallidum:107

H2ZWY2              	100.00%		D3B568              	100.00%
Bootstrap support for H2ZWY2 as seed ortholog is 93%.
Bootstrap support for D3B568 as seed ortholog is 98%.

Group of orthologs #798. Best score 311 bits
Score difference with first non-orthologous sequence - L.chalumnae:311 P.pallidum:311

H2ZZ48              	100.00%		D3BGB9              	100.00%
Bootstrap support for H2ZZ48 as seed ortholog is 100%.
Bootstrap support for D3BGB9 as seed ortholog is 100%.

Group of orthologs #799. Best score 310 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 P.pallidum:126

H3ACE2              	100.00%		D3AVX5              	100.00%
H2ZVW0              	43.86%		
H3A961              	32.75%		
H3BD34              	30.41%		
Bootstrap support for H3ACE2 as seed ortholog is 100%.
Bootstrap support for D3AVX5 as seed ortholog is 100%.

Group of orthologs #800. Best score 310 bits
Score difference with first non-orthologous sequence - L.chalumnae:310 P.pallidum:97

H3AXM8              	100.00%		D3B851              	100.00%
H3AEQ2              	5.97%		
Bootstrap support for H3AXM8 as seed ortholog is 100%.
Bootstrap support for D3B851 as seed ortholog is 97%.

Group of orthologs #801. Best score 310 bits
Score difference with first non-orthologous sequence - L.chalumnae:310 P.pallidum:310

H3ACH9              	100.00%		D3AWU9              	100.00%
Bootstrap support for H3ACH9 as seed ortholog is 100%.
Bootstrap support for D3AWU9 as seed ortholog is 100%.

Group of orthologs #802. Best score 310 bits
Score difference with first non-orthologous sequence - L.chalumnae:310 P.pallidum:310

H3A4D6              	100.00%		D3BI88              	100.00%
Bootstrap support for H3A4D6 as seed ortholog is 100%.
Bootstrap support for D3BI88 as seed ortholog is 100%.

Group of orthologs #803. Best score 309 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 P.pallidum:139

H3AFH0              	100.00%		D3BHH2              	100.00%
Bootstrap support for H3AFH0 as seed ortholog is 99%.
Bootstrap support for D3BHH2 as seed ortholog is 96%.

Group of orthologs #804. Best score 309 bits
Score difference with first non-orthologous sequence - L.chalumnae:309 P.pallidum:309

H3ALU6              	100.00%		D3BMU1              	100.00%
Bootstrap support for H3ALU6 as seed ortholog is 100%.
Bootstrap support for D3BMU1 as seed ortholog is 100%.

Group of orthologs #805. Best score 308 bits
Score difference with first non-orthologous sequence - L.chalumnae:308 P.pallidum:308

H3A0W1              	100.00%		D3B6E5              	100.00%
Bootstrap support for H3A0W1 as seed ortholog is 100%.
Bootstrap support for D3B6E5 as seed ortholog is 100%.

Group of orthologs #806. Best score 308 bits
Score difference with first non-orthologous sequence - L.chalumnae:308 P.pallidum:308

H3A712              	100.00%		D3B6X6              	100.00%
Bootstrap support for H3A712 as seed ortholog is 100%.
Bootstrap support for D3B6X6 as seed ortholog is 100%.

Group of orthologs #807. Best score 308 bits
Score difference with first non-orthologous sequence - L.chalumnae:204 P.pallidum:229

H3BAC1              	100.00%		D3BR68              	100.00%
Bootstrap support for H3BAC1 as seed ortholog is 100%.
Bootstrap support for D3BR68 as seed ortholog is 100%.

Group of orthologs #808. Best score 307 bits
Score difference with first non-orthologous sequence - L.chalumnae:9 P.pallidum:258

M3XHS0              	100.00%		D3BH26              	100.00%
H3AIH3              	44.91%		
Bootstrap support for M3XHS0 as seed ortholog is 65%.
Alternative seed ortholog is M3XKQ9 (9 bits away from this cluster)
Bootstrap support for D3BH26 as seed ortholog is 100%.

Group of orthologs #809. Best score 307 bits
Score difference with first non-orthologous sequence - L.chalumnae:307 P.pallidum:307

H3A1M6              	100.00%		D3B2K3              	100.00%
Bootstrap support for H3A1M6 as seed ortholog is 100%.
Bootstrap support for D3B2K3 as seed ortholog is 100%.

Group of orthologs #810. Best score 307 bits
Score difference with first non-orthologous sequence - L.chalumnae:307 P.pallidum:307

H3AHX8              	100.00%		D3B6K2              	100.00%
Bootstrap support for H3AHX8 as seed ortholog is 100%.
Bootstrap support for D3B6K2 as seed ortholog is 100%.

Group of orthologs #811. Best score 307 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 P.pallidum:161

H3ASR1              	100.00%		D3BUT4              	100.00%
Bootstrap support for H3ASR1 as seed ortholog is 99%.
Bootstrap support for D3BUT4 as seed ortholog is 99%.

Group of orthologs #812. Best score 306 bits
Score difference with first non-orthologous sequence - L.chalumnae:160 P.pallidum:79

H3AH13              	100.00%		D3BR25              	100.00%
H3B907              	53.35%		
H2ZUG3              	20.80%		
Bootstrap support for H3AH13 as seed ortholog is 99%.
Bootstrap support for D3BR25 as seed ortholog is 97%.

Group of orthologs #813. Best score 306 bits
Score difference with first non-orthologous sequence - L.chalumnae:306 P.pallidum:306

H3AX99              	100.00%		D3BHC9              	100.00%
M3XGH3              	31.65%		
Bootstrap support for H3AX99 as seed ortholog is 100%.
Bootstrap support for D3BHC9 as seed ortholog is 100%.

Group of orthologs #814. Best score 306 bits
Score difference with first non-orthologous sequence - L.chalumnae:306 P.pallidum:306

H3AB41              	100.00%		D3BII4              	100.00%
Bootstrap support for H3AB41 as seed ortholog is 100%.
Bootstrap support for D3BII4 as seed ortholog is 100%.

Group of orthologs #815. Best score 305 bits
Score difference with first non-orthologous sequence - L.chalumnae:305 P.pallidum:231

H2ZWB2              	100.00%		D3BD64              	100.00%
Bootstrap support for H2ZWB2 as seed ortholog is 100%.
Bootstrap support for D3BD64 as seed ortholog is 100%.

Group of orthologs #816. Best score 305 bits
Score difference with first non-orthologous sequence - L.chalumnae:305 P.pallidum:305

H3BCT6              	100.00%		D3B7T3              	100.00%
Bootstrap support for H3BCT6 as seed ortholog is 100%.
Bootstrap support for D3B7T3 as seed ortholog is 100%.

Group of orthologs #817. Best score 303 bits
Score difference with first non-orthologous sequence - L.chalumnae:303 P.pallidum:303

H3B832              	100.00%		D3BV94              	100.00%
                    	       		D3BVB3              	35.42%
                    	       		D3BVB6              	26.57%
Bootstrap support for H3B832 as seed ortholog is 100%.
Bootstrap support for D3BV94 as seed ortholog is 100%.

Group of orthologs #818. Best score 303 bits
Score difference with first non-orthologous sequence - L.chalumnae:303 P.pallidum:303

H3AYD4              	100.00%		D3BPG0              	100.00%
Bootstrap support for H3AYD4 as seed ortholog is 100%.
Bootstrap support for D3BPG0 as seed ortholog is 100%.

Group of orthologs #819. Best score 303 bits
Score difference with first non-orthologous sequence - L.chalumnae:228 P.pallidum:303

H3BAZ5              	100.00%		D3BHT0              	100.00%
Bootstrap support for H3BAZ5 as seed ortholog is 100%.
Bootstrap support for D3BHT0 as seed ortholog is 100%.

Group of orthologs #820. Best score 302 bits
Score difference with first non-orthologous sequence - L.chalumnae:118 P.pallidum:7

H3AXT0              	100.00%		D3BP55              	100.00%
H3AYA0              	72.90%		
Bootstrap support for H3AXT0 as seed ortholog is 99%.
Bootstrap support for D3BP55 as seed ortholog is 62%.
Alternative seed ortholog is D3BLV3 (7 bits away from this cluster)

Group of orthologs #821. Best score 302 bits
Score difference with first non-orthologous sequence - L.chalumnae:205 P.pallidum:211

H3A2I6              	100.00%		D3B725              	100.00%
Bootstrap support for H3A2I6 as seed ortholog is 100%.
Bootstrap support for D3B725 as seed ortholog is 100%.

Group of orthologs #822. Best score 302 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.pallidum:237

H2ZX98              	100.00%		D3BEA5              	100.00%
Bootstrap support for H2ZX98 as seed ortholog is 99%.
Bootstrap support for D3BEA5 as seed ortholog is 100%.

Group of orthologs #823. Best score 302 bits
Score difference with first non-orthologous sequence - L.chalumnae:302 P.pallidum:302

H2ZYP3              	100.00%		D3BIB6              	100.00%
Bootstrap support for H2ZYP3 as seed ortholog is 100%.
Bootstrap support for D3BIB6 as seed ortholog is 100%.

Group of orthologs #824. Best score 302 bits
Score difference with first non-orthologous sequence - L.chalumnae:302 P.pallidum:302

H3ANW2              	100.00%		D3AYM5              	100.00%
Bootstrap support for H3ANW2 as seed ortholog is 100%.
Bootstrap support for D3AYM5 as seed ortholog is 100%.

Group of orthologs #825. Best score 302 bits
Score difference with first non-orthologous sequence - L.chalumnae:203 P.pallidum:235

H3AI52              	100.00%		D3BG93              	100.00%
Bootstrap support for H3AI52 as seed ortholog is 100%.
Bootstrap support for D3BG93 as seed ortholog is 100%.

Group of orthologs #826. Best score 302 bits
Score difference with first non-orthologous sequence - L.chalumnae:302 P.pallidum:302

H3ATB7              	100.00%		D3BAF6              	100.00%
Bootstrap support for H3ATB7 as seed ortholog is 100%.
Bootstrap support for D3BAF6 as seed ortholog is 100%.

Group of orthologs #827. Best score 302 bits
Score difference with first non-orthologous sequence - L.chalumnae:302 P.pallidum:302

H3BFY7              	100.00%		D3BK79              	100.00%
Bootstrap support for H3BFY7 as seed ortholog is 100%.
Bootstrap support for D3BK79 as seed ortholog is 100%.

Group of orthologs #828. Best score 301 bits
Score difference with first non-orthologous sequence - L.chalumnae:301 P.pallidum:301

H2ZZG7              	100.00%		D3AZP7              	100.00%
H3B0F8              	17.37%		
Bootstrap support for H2ZZG7 as seed ortholog is 100%.
Bootstrap support for D3AZP7 as seed ortholog is 100%.

Group of orthologs #829. Best score 301 bits
Score difference with first non-orthologous sequence - L.chalumnae:183 P.pallidum:203

H3B3P9              	100.00%		D3B238              	100.00%
Bootstrap support for H3B3P9 as seed ortholog is 100%.
Bootstrap support for D3B238 as seed ortholog is 100%.

Group of orthologs #830. Best score 301 bits
Score difference with first non-orthologous sequence - L.chalumnae:301 P.pallidum:301

H3B692              	100.00%		D3B7N8              	100.00%
Bootstrap support for H3B692 as seed ortholog is 100%.
Bootstrap support for D3B7N8 as seed ortholog is 100%.

Group of orthologs #831. Best score 300 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.pallidum:300

H3A5L2              	100.00%		D3BTS5              	100.00%
H2ZXJ6              	52.55%		
Bootstrap support for H3A5L2 as seed ortholog is 99%.
Bootstrap support for D3BTS5 as seed ortholog is 100%.

Group of orthologs #832. Best score 300 bits
Score difference with first non-orthologous sequence - L.chalumnae:300 P.pallidum:300

H3A0R6              	100.00%		D3BP59              	100.00%
Bootstrap support for H3A0R6 as seed ortholog is 100%.
Bootstrap support for D3BP59 as seed ortholog is 100%.

Group of orthologs #833. Best score 300 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 P.pallidum:105

H3ASS0              	100.00%		D3B3M6              	100.00%
Bootstrap support for H3ASS0 as seed ortholog is 100%.
Bootstrap support for D3B3M6 as seed ortholog is 100%.

Group of orthologs #834. Best score 299 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.pallidum:299

H3B5T0              	100.00%		D3B6G7              	100.00%
H3A4V8              	69.16%		
H3B232              	11.01%		
Bootstrap support for H3B5T0 as seed ortholog is 99%.
Bootstrap support for D3B6G7 as seed ortholog is 100%.

Group of orthologs #835. Best score 299 bits
Score difference with first non-orthologous sequence - L.chalumnae:299 P.pallidum:299

H3AIQ7              	100.00%		D3B5U9              	100.00%
H3A7A8              	70.57%		
Bootstrap support for H3AIQ7 as seed ortholog is 100%.
Bootstrap support for D3B5U9 as seed ortholog is 100%.

Group of orthologs #836. Best score 299 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 P.pallidum:299

H3A141              	100.00%		D3BCZ8              	100.00%
Bootstrap support for H3A141 as seed ortholog is 100%.
Bootstrap support for D3BCZ8 as seed ortholog is 100%.

Group of orthologs #837. Best score 299 bits
Score difference with first non-orthologous sequence - L.chalumnae:299 P.pallidum:299

H3ABR2              	100.00%		D3BFX8              	100.00%
Bootstrap support for H3ABR2 as seed ortholog is 100%.
Bootstrap support for D3BFX8 as seed ortholog is 100%.

Group of orthologs #838. Best score 299 bits
Score difference with first non-orthologous sequence - L.chalumnae:299 P.pallidum:299

H3B0X2              	100.00%		D3B3N5              	100.00%
Bootstrap support for H3B0X2 as seed ortholog is 100%.
Bootstrap support for D3B3N5 as seed ortholog is 100%.

Group of orthologs #839. Best score 299 bits
Score difference with first non-orthologous sequence - L.chalumnae:157 P.pallidum:196

H3B9G3              	100.00%		D3B0J9              	100.00%
Bootstrap support for H3B9G3 as seed ortholog is 99%.
Bootstrap support for D3B0J9 as seed ortholog is 100%.

Group of orthologs #840. Best score 299 bits
Score difference with first non-orthologous sequence - L.chalumnae:299 P.pallidum:299

H3B0V1              	100.00%		D3BAC3              	100.00%
Bootstrap support for H3B0V1 as seed ortholog is 100%.
Bootstrap support for D3BAC3 as seed ortholog is 100%.

Group of orthologs #841. Best score 299 bits
Score difference with first non-orthologous sequence - L.chalumnae:252 P.pallidum:299

H3B881              	100.00%		D3BBN6              	100.00%
Bootstrap support for H3B881 as seed ortholog is 100%.
Bootstrap support for D3BBN6 as seed ortholog is 100%.

Group of orthologs #842. Best score 298 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.pallidum:78

H3A0Y7              	100.00%		D3BJ60              	100.00%
H3AU66              	100.00%		D3BUN6              	100.00%
H3BEF4              	20.00%		D3BB03              	35.84%
H2ZRS7              	11.86%		D3BL12              	29.77%
H3AZW0              	10.70%		D3BB13              	24.28%
H3B3H0              	10.70%		D3BKJ7              	24.28%
                    	       		D3AXL6              	24.04%
Bootstrap support for H3A0Y7 as seed ortholog is 92%.
Bootstrap support for H3AU66 as seed ortholog is 82%.
Bootstrap support for D3BJ60 as seed ortholog is 96%.
Bootstrap support for D3BUN6 as seed ortholog is 93%.

Group of orthologs #843. Best score 298 bits
Score difference with first non-orthologous sequence - L.chalumnae:43 P.pallidum:298

H3AAV5              	100.00%		D3BTG9              	100.00%
H3B9F6              	29.44%		
Bootstrap support for H3AAV5 as seed ortholog is 91%.
Bootstrap support for D3BTG9 as seed ortholog is 100%.

Group of orthologs #844. Best score 298 bits
Score difference with first non-orthologous sequence - L.chalumnae:298 P.pallidum:298

H2ZUH4              	100.00%		D3BU50              	100.00%
Bootstrap support for H2ZUH4 as seed ortholog is 100%.
Bootstrap support for D3BU50 as seed ortholog is 100%.

Group of orthologs #845. Best score 298 bits
Score difference with first non-orthologous sequence - L.chalumnae:298 P.pallidum:298

H3B0S0              	100.00%		D3BKF4              	100.00%
Bootstrap support for H3B0S0 as seed ortholog is 100%.
Bootstrap support for D3BKF4 as seed ortholog is 100%.

Group of orthologs #846. Best score 298 bits
Score difference with first non-orthologous sequence - L.chalumnae:298 P.pallidum:298

H3B7P3              	100.00%		D3BF27              	100.00%
Bootstrap support for H3B7P3 as seed ortholog is 100%.
Bootstrap support for D3BF27 as seed ortholog is 100%.

Group of orthologs #847. Best score 297 bits
Score difference with first non-orthologous sequence - L.chalumnae:297 P.pallidum:57

M3XK38              	100.00%		D3BP50              	100.00%
                    	       		D3B270              	45.38%
                    	       		D3BEJ2              	8.39%
Bootstrap support for M3XK38 as seed ortholog is 100%.
Bootstrap support for D3BP50 as seed ortholog is 89%.

Group of orthologs #848. Best score 297 bits
Score difference with first non-orthologous sequence - L.chalumnae:297 P.pallidum:297

H3AG59              	100.00%		D3BCX8              	100.00%
Bootstrap support for H3AG59 as seed ortholog is 100%.
Bootstrap support for D3BCX8 as seed ortholog is 100%.

Group of orthologs #849. Best score 297 bits
Score difference with first non-orthologous sequence - L.chalumnae:297 P.pallidum:297

H3AX24              	100.00%		D3BH91              	100.00%
Bootstrap support for H3AX24 as seed ortholog is 100%.
Bootstrap support for D3BH91 as seed ortholog is 100%.

Group of orthologs #850. Best score 297 bits
Score difference with first non-orthologous sequence - L.chalumnae:297 P.pallidum:297

M3XHV9              	100.00%		D3B3M0              	100.00%
Bootstrap support for M3XHV9 as seed ortholog is 100%.
Bootstrap support for D3B3M0 as seed ortholog is 100%.

Group of orthologs #851. Best score 297 bits
Score difference with first non-orthologous sequence - L.chalumnae:297 P.pallidum:180

H3BG48              	100.00%		D3BLV6              	100.00%
Bootstrap support for H3BG48 as seed ortholog is 100%.
Bootstrap support for D3BLV6 as seed ortholog is 100%.

Group of orthologs #852. Best score 296 bits
Score difference with first non-orthologous sequence - L.chalumnae:11 P.pallidum:296

H3AEP4              	100.00%		D3BD10              	100.00%
Bootstrap support for H3AEP4 as seed ortholog is 60%.
Alternative seed ortholog is H3BAF3 (11 bits away from this cluster)
Bootstrap support for D3BD10 as seed ortholog is 100%.

Group of orthologs #853. Best score 296 bits
Score difference with first non-orthologous sequence - L.chalumnae:171 P.pallidum:296

H3A4B7              	100.00%		D3BQ12              	100.00%
Bootstrap support for H3A4B7 as seed ortholog is 100%.
Bootstrap support for D3BQ12 as seed ortholog is 100%.

Group of orthologs #854. Best score 296 bits
Score difference with first non-orthologous sequence - L.chalumnae:296 P.pallidum:296

H3BGD3              	100.00%		D3AX76              	100.00%
Bootstrap support for H3BGD3 as seed ortholog is 100%.
Bootstrap support for D3AX76 as seed ortholog is 100%.

Group of orthologs #855. Best score 295 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.pallidum:295

H3AS54              	100.00%		D3B4Z8              	100.00%
H3BGL6              	17.45%		D3BHS8              	15.25%
Bootstrap support for H3AS54 as seed ortholog is 62%.
Alternative seed ortholog is H3AER0 (85 bits away from this cluster)
Bootstrap support for D3B4Z8 as seed ortholog is 100%.

Group of orthologs #856. Best score 295 bits
Score difference with first non-orthologous sequence - L.chalumnae:295 P.pallidum:295

H3AWF4              	100.00%		D3B686              	100.00%
Bootstrap support for H3AWF4 as seed ortholog is 100%.
Bootstrap support for D3B686 as seed ortholog is 100%.

Group of orthologs #857. Best score 295 bits
Score difference with first non-orthologous sequence - L.chalumnae:295 P.pallidum:295

H3ALJ5              	100.00%		D3BNE3              	100.00%
Bootstrap support for H3ALJ5 as seed ortholog is 100%.
Bootstrap support for D3BNE3 as seed ortholog is 100%.

Group of orthologs #858. Best score 294 bits
Score difference with first non-orthologous sequence - L.chalumnae:294 P.pallidum:294

H3A3R3              	100.00%		D3BEQ0              	100.00%
H2ZY55              	46.20%		
H3AJP9              	41.16%		
Bootstrap support for H3A3R3 as seed ortholog is 100%.
Bootstrap support for D3BEQ0 as seed ortholog is 100%.

Group of orthologs #859. Best score 294 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 P.pallidum:80

H3ATJ5              	100.00%		D3BH94              	100.00%
H3BGQ6              	62.67%		
Bootstrap support for H3ATJ5 as seed ortholog is 99%.
Bootstrap support for D3BH94 as seed ortholog is 99%.

Group of orthologs #860. Best score 294 bits
Score difference with first non-orthologous sequence - L.chalumnae:294 P.pallidum:294

H3ALE4              	100.00%		D3AZF5              	100.00%
Bootstrap support for H3ALE4 as seed ortholog is 100%.
Bootstrap support for D3AZF5 as seed ortholog is 100%.

Group of orthologs #861. Best score 294 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.pallidum:153

H2ZTZ0              	100.00%		D3BSL6              	100.00%
Bootstrap support for H2ZTZ0 as seed ortholog is 94%.
Bootstrap support for D3BSL6 as seed ortholog is 100%.

Group of orthologs #862. Best score 294 bits
Score difference with first non-orthologous sequence - L.chalumnae:19 P.pallidum:294

H3AY26              	100.00%		D3B3X7              	100.00%
Bootstrap support for H3AY26 as seed ortholog is 82%.
Bootstrap support for D3B3X7 as seed ortholog is 100%.

Group of orthologs #863. Best score 294 bits
Score difference with first non-orthologous sequence - L.chalumnae:215 P.pallidum:294

H3ANK7              	100.00%		D3BEQ8              	100.00%
Bootstrap support for H3ANK7 as seed ortholog is 100%.
Bootstrap support for D3BEQ8 as seed ortholog is 100%.

Group of orthologs #864. Best score 294 bits
Score difference with first non-orthologous sequence - L.chalumnae:70 P.pallidum:118

H3BCE0              	100.00%		D3BCE4              	100.00%
Bootstrap support for H3BCE0 as seed ortholog is 93%.
Bootstrap support for D3BCE4 as seed ortholog is 99%.

Group of orthologs #865. Best score 294 bits
Score difference with first non-orthologous sequence - L.chalumnae:294 P.pallidum:294

H3B8I2              	100.00%		D3BQD4              	100.00%
Bootstrap support for H3B8I2 as seed ortholog is 100%.
Bootstrap support for D3BQD4 as seed ortholog is 100%.

Group of orthologs #866. Best score 292 bits
Score difference with first non-orthologous sequence - L.chalumnae:292 P.pallidum:292

H3AVI6              	100.00%		D3BKS0              	100.00%
                    	       		D3BBX1              	30.38%
                    	       		D3B7Q9              	16.72%
                    	       		D3B6P3              	7.05%
                    	       		D3B3M5              	5.57%
Bootstrap support for H3AVI6 as seed ortholog is 100%.
Bootstrap support for D3BKS0 as seed ortholog is 100%.

Group of orthologs #867. Best score 292 bits
Score difference with first non-orthologous sequence - L.chalumnae:181 P.pallidum:81

H3ACJ6              	100.00%		D3B2B1              	100.00%
H3AT64              	54.49%		
Bootstrap support for H3ACJ6 as seed ortholog is 99%.
Bootstrap support for D3B2B1 as seed ortholog is 97%.

Group of orthologs #868. Best score 292 bits
Score difference with first non-orthologous sequence - L.chalumnae:204 P.pallidum:292

H3BHG4              	100.00%		D3B0N9              	100.00%
H3B1F4              	33.45%		
Bootstrap support for H3BHG4 as seed ortholog is 100%.
Bootstrap support for D3B0N9 as seed ortholog is 100%.

Group of orthologs #869. Best score 292 bits
Score difference with first non-orthologous sequence - L.chalumnae:292 P.pallidum:292

H3ASY8              	100.00%		D3AWD3              	100.00%
Bootstrap support for H3ASY8 as seed ortholog is 100%.
Bootstrap support for D3AWD3 as seed ortholog is 100%.

Group of orthologs #870. Best score 292 bits
Score difference with first non-orthologous sequence - L.chalumnae:292 P.pallidum:292

H3B2M7              	100.00%		D3B732              	100.00%
Bootstrap support for H3B2M7 as seed ortholog is 100%.
Bootstrap support for D3B732 as seed ortholog is 100%.

Group of orthologs #871. Best score 292 bits
Score difference with first non-orthologous sequence - L.chalumnae:292 P.pallidum:292

H3AHV0              	100.00%		D3BQI5              	100.00%
Bootstrap support for H3AHV0 as seed ortholog is 100%.
Bootstrap support for D3BQI5 as seed ortholog is 100%.

Group of orthologs #872. Best score 292 bits
Score difference with first non-orthologous sequence - L.chalumnae:292 P.pallidum:88

H3B800              	100.00%		D3B8P9              	100.00%
Bootstrap support for H3B800 as seed ortholog is 100%.
Bootstrap support for D3B8P9 as seed ortholog is 97%.

Group of orthologs #873. Best score 292 bits
Score difference with first non-orthologous sequence - L.chalumnae:292 P.pallidum:292

H3AWR4              	100.00%		D3BSN3              	100.00%
Bootstrap support for H3AWR4 as seed ortholog is 100%.
Bootstrap support for D3BSN3 as seed ortholog is 100%.

Group of orthologs #874. Best score 291 bits
Score difference with first non-orthologous sequence - L.chalumnae:291 P.pallidum:291

H3AKN2              	100.00%		D3BMQ0              	100.00%
Bootstrap support for H3AKN2 as seed ortholog is 100%.
Bootstrap support for D3BMQ0 as seed ortholog is 100%.

Group of orthologs #875. Best score 290 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 P.pallidum:74

H3AX47              	100.00%		D3BGU2              	100.00%
H3B3C5              	12.41%		
Bootstrap support for H3AX47 as seed ortholog is 99%.
Bootstrap support for D3BGU2 as seed ortholog is 98%.

Group of orthologs #876. Best score 290 bits
Score difference with first non-orthologous sequence - L.chalumnae:290 P.pallidum:8

H2ZSV5              	100.00%		D3BAQ5              	100.00%
Bootstrap support for H2ZSV5 as seed ortholog is 100%.
Bootstrap support for D3BAQ5 as seed ortholog is 56%.
Alternative seed ortholog is D3AYF1 (8 bits away from this cluster)

Group of orthologs #877. Best score 290 bits
Score difference with first non-orthologous sequence - L.chalumnae:46 P.pallidum:290

H3AEJ3              	100.00%		D3BBJ8              	100.00%
Bootstrap support for H3AEJ3 as seed ortholog is 63%.
Alternative seed ortholog is H3ARX4 (46 bits away from this cluster)
Bootstrap support for D3BBJ8 as seed ortholog is 100%.

Group of orthologs #878. Best score 290 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.pallidum:10

H3B2Q0              	100.00%		D3AZA3              	100.00%
Bootstrap support for H3B2Q0 as seed ortholog is 94%.
Bootstrap support for D3AZA3 as seed ortholog is 85%.

Group of orthologs #879. Best score 290 bits
Score difference with first non-orthologous sequence - L.chalumnae:290 P.pallidum:290

H3AVV6              	100.00%		D3B806              	100.00%
Bootstrap support for H3AVV6 as seed ortholog is 100%.
Bootstrap support for D3B806 as seed ortholog is 100%.

Group of orthologs #880. Best score 290 bits
Score difference with first non-orthologous sequence - L.chalumnae:290 P.pallidum:290

H3AZL7              	100.00%		D3BNL4              	100.00%
Bootstrap support for H3AZL7 as seed ortholog is 100%.
Bootstrap support for D3BNL4 as seed ortholog is 100%.

Group of orthologs #881. Best score 289 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 P.pallidum:289

H3AEH1              	100.00%		D3BB15              	100.00%
                    	       		D3BIM9              	24.80%
Bootstrap support for H3AEH1 as seed ortholog is 99%.
Bootstrap support for D3BB15 as seed ortholog is 100%.

Group of orthologs #882. Best score 289 bits
Score difference with first non-orthologous sequence - L.chalumnae:289 P.pallidum:289

H2ZSE7              	100.00%		D3BBM4              	100.00%
Bootstrap support for H2ZSE7 as seed ortholog is 100%.
Bootstrap support for D3BBM4 as seed ortholog is 100%.

Group of orthologs #883. Best score 289 bits
Score difference with first non-orthologous sequence - L.chalumnae:289 P.pallidum:289

H3AAA4              	100.00%		D3BSY5              	100.00%
Bootstrap support for H3AAA4 as seed ortholog is 100%.
Bootstrap support for D3BSY5 as seed ortholog is 100%.

Group of orthologs #884. Best score 288 bits
Score difference with first non-orthologous sequence - L.chalumnae:288 P.pallidum:288

H3A6D1              	100.00%		D3B206              	100.00%
H3ASN3              	27.06%		
Bootstrap support for H3A6D1 as seed ortholog is 100%.
Bootstrap support for D3B206 as seed ortholog is 100%.

Group of orthologs #885. Best score 288 bits
Score difference with first non-orthologous sequence - L.chalumnae:288 P.pallidum:288

H3A2Y2              	100.00%		D3B3U3              	100.00%
Bootstrap support for H3A2Y2 as seed ortholog is 100%.
Bootstrap support for D3B3U3 as seed ortholog is 100%.

Group of orthologs #886. Best score 288 bits
Score difference with first non-orthologous sequence - L.chalumnae:288 P.pallidum:288

H3AQE0              	100.00%		D3B3R7              	100.00%
Bootstrap support for H3AQE0 as seed ortholog is 100%.
Bootstrap support for D3B3R7 as seed ortholog is 100%.

Group of orthologs #887. Best score 288 bits
Score difference with first non-orthologous sequence - L.chalumnae:155 P.pallidum:82

H3B7D5              	100.00%		D3B3S8              	100.00%
Bootstrap support for H3B7D5 as seed ortholog is 99%.
Bootstrap support for D3B3S8 as seed ortholog is 100%.

Group of orthologs #888. Best score 288 bits
Score difference with first non-orthologous sequence - L.chalumnae:195 P.pallidum:200

H3B9B6              	100.00%		D3BCF1              	100.00%
Bootstrap support for H3B9B6 as seed ortholog is 100%.
Bootstrap support for D3BCF1 as seed ortholog is 99%.

Group of orthologs #889. Best score 287 bits
Score difference with first non-orthologous sequence - L.chalumnae:186 P.pallidum:210

H3AXH7              	100.00%		D3AWZ0              	100.00%
H3AGW0              	35.55%		
H3B9K5              	33.80%		
H2ZRJ6              	9.05%		
Bootstrap support for H3AXH7 as seed ortholog is 100%.
Bootstrap support for D3AWZ0 as seed ortholog is 100%.

Group of orthologs #890. Best score 287 bits
Score difference with first non-orthologous sequence - L.chalumnae:287 P.pallidum:287

H2ZV14              	100.00%		D3B5U0              	100.00%
Bootstrap support for H2ZV14 as seed ortholog is 100%.
Bootstrap support for D3B5U0 as seed ortholog is 100%.

Group of orthologs #891. Best score 287 bits
Score difference with first non-orthologous sequence - L.chalumnae:287 P.pallidum:287

H3B950              	100.00%		D3BUA6              	100.00%
Bootstrap support for H3B950 as seed ortholog is 100%.
Bootstrap support for D3BUA6 as seed ortholog is 100%.

Group of orthologs #892. Best score 286 bits
Score difference with first non-orthologous sequence - L.chalumnae:286 P.pallidum:286

H3AT27              	100.00%		D3B6Y4              	100.00%
Bootstrap support for H3AT27 as seed ortholog is 100%.
Bootstrap support for D3B6Y4 as seed ortholog is 100%.

Group of orthologs #893. Best score 286 bits
Score difference with first non-orthologous sequence - L.chalumnae:286 P.pallidum:286

H3BC27              	100.00%		D3AZB1              	100.00%
Bootstrap support for H3BC27 as seed ortholog is 100%.
Bootstrap support for D3AZB1 as seed ortholog is 100%.

Group of orthologs #894. Best score 286 bits
Score difference with first non-orthologous sequence - L.chalumnae:286 P.pallidum:286

H3BBK7              	100.00%		D3BKA5              	100.00%
Bootstrap support for H3BBK7 as seed ortholog is 100%.
Bootstrap support for D3BKA5 as seed ortholog is 100%.

Group of orthologs #895. Best score 285 bits
Score difference with first non-orthologous sequence - L.chalumnae:116 P.pallidum:6

H3ATW7              	100.00%		D3B9N2              	100.00%
H2ZXD4              	55.36%		
H3ARF4              	42.39%		
Bootstrap support for H3ATW7 as seed ortholog is 99%.
Bootstrap support for D3B9N2 as seed ortholog is 57%.
Alternative seed ortholog is D3AZY1 (6 bits away from this cluster)

Group of orthologs #896. Best score 285 bits
Score difference with first non-orthologous sequence - L.chalumnae:285 P.pallidum:285

H3BDU0              	100.00%		D3BL62              	100.00%
H3AAK4              	16.85%		
Bootstrap support for H3BDU0 as seed ortholog is 100%.
Bootstrap support for D3BL62 as seed ortholog is 100%.

Group of orthologs #897. Best score 285 bits
Score difference with first non-orthologous sequence - L.chalumnae:285 P.pallidum:285

H3BI78              	100.00%		D3BTE8              	100.00%
H3AUQ3              	63.14%		
Bootstrap support for H3BI78 as seed ortholog is 100%.
Bootstrap support for D3BTE8 as seed ortholog is 100%.

Group of orthologs #898. Best score 285 bits
Score difference with first non-orthologous sequence - L.chalumnae:285 P.pallidum:95

H3AJN6              	100.00%		D3B0Q0              	100.00%
Bootstrap support for H3AJN6 as seed ortholog is 100%.
Bootstrap support for D3B0Q0 as seed ortholog is 98%.

Group of orthologs #899. Best score 285 bits
Score difference with first non-orthologous sequence - L.chalumnae:285 P.pallidum:285

H3AL71              	100.00%		D3BIY8              	100.00%
Bootstrap support for H3AL71 as seed ortholog is 100%.
Bootstrap support for D3BIY8 as seed ortholog is 100%.

Group of orthologs #900. Best score 285 bits
Score difference with first non-orthologous sequence - L.chalumnae:244 P.pallidum:285

H3B063              	100.00%		D3B770              	100.00%
Bootstrap support for H3B063 as seed ortholog is 100%.
Bootstrap support for D3B770 as seed ortholog is 100%.

Group of orthologs #901. Best score 284 bits
Score difference with first non-orthologous sequence - L.chalumnae:232 P.pallidum:284

H2ZUN6              	100.00%		D3B2L6              	100.00%
Bootstrap support for H2ZUN6 as seed ortholog is 100%.
Bootstrap support for D3B2L6 as seed ortholog is 100%.

Group of orthologs #902. Best score 283 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 P.pallidum:283

H3AC32              	100.00%		D3BMF0              	100.00%
H3A4P5              	52.80%		D3BRP7              	18.89%
H3AZR9              	12.39%		
H3AHK0              	8.00%		
H3ADB3              	7.07%		
H3BCJ3              	5.54%		
Bootstrap support for H3AC32 as seed ortholog is 99%.
Bootstrap support for D3BMF0 as seed ortholog is 100%.

Group of orthologs #903. Best score 283 bits
Score difference with first non-orthologous sequence - L.chalumnae:176 P.pallidum:283

H3A3U5              	100.00%		D3BF70              	100.00%
Bootstrap support for H3A3U5 as seed ortholog is 99%.
Bootstrap support for D3BF70 as seed ortholog is 100%.

Group of orthologs #904. Best score 283 bits
Score difference with first non-orthologous sequence - L.chalumnae:283 P.pallidum:162

H3A9G4              	100.00%		D3BC07              	100.00%
Bootstrap support for H3A9G4 as seed ortholog is 100%.
Bootstrap support for D3BC07 as seed ortholog is 99%.

Group of orthologs #905. Best score 283 bits
Score difference with first non-orthologous sequence - L.chalumnae:156 P.pallidum:283

H3ANP9              	100.00%		D3B8K6              	100.00%
Bootstrap support for H3ANP9 as seed ortholog is 100%.
Bootstrap support for D3B8K6 as seed ortholog is 100%.

Group of orthologs #906. Best score 282 bits
Score difference with first non-orthologous sequence - L.chalumnae:31 P.pallidum:164

H3AZR2              	100.00%		D3BPL3              	100.00%
H3A1C6              	35.79%		D3BP03              	48.28%
Bootstrap support for H3AZR2 as seed ortholog is 81%.
Bootstrap support for D3BPL3 as seed ortholog is 99%.

Group of orthologs #907. Best score 282 bits
Score difference with first non-orthologous sequence - L.chalumnae:282 P.pallidum:282

H3AB50              	100.00%		D3BAI7              	100.00%
H3AJQ2              	63.68%		
Bootstrap support for H3AB50 as seed ortholog is 100%.
Bootstrap support for D3BAI7 as seed ortholog is 100%.

Group of orthologs #908. Best score 282 bits
Score difference with first non-orthologous sequence - L.chalumnae:282 P.pallidum:282

H3A155              	100.00%		D3BRK4              	100.00%
Bootstrap support for H3A155 as seed ortholog is 100%.
Bootstrap support for D3BRK4 as seed ortholog is 100%.

Group of orthologs #909. Best score 282 bits
Score difference with first non-orthologous sequence - L.chalumnae:282 P.pallidum:282

H3B8R6              	100.00%		D3B0H6              	100.00%
Bootstrap support for H3B8R6 as seed ortholog is 100%.
Bootstrap support for D3B0H6 as seed ortholog is 100%.

Group of orthologs #910. Best score 282 bits
Score difference with first non-orthologous sequence - L.chalumnae:282 P.pallidum:282

H3B1T9              	100.00%		D3BDT2              	100.00%
Bootstrap support for H3B1T9 as seed ortholog is 100%.
Bootstrap support for D3BDT2 as seed ortholog is 100%.

Group of orthologs #911. Best score 281 bits
Score difference with first non-orthologous sequence - L.chalumnae:281 P.pallidum:281

H2ZWE7              	100.00%		D3BII7              	100.00%
H3AZC2              	8.55%		
Bootstrap support for H2ZWE7 as seed ortholog is 100%.
Bootstrap support for D3BII7 as seed ortholog is 100%.

Group of orthologs #912. Best score 281 bits
Score difference with first non-orthologous sequence - L.chalumnae:190 P.pallidum:145

H3AKH3              	100.00%		D3BK51              	100.00%
                    	       		D3BJC4              	96.99%
Bootstrap support for H3AKH3 as seed ortholog is 100%.
Bootstrap support for D3BK51 as seed ortholog is 99%.

Group of orthologs #913. Best score 281 bits
Score difference with first non-orthologous sequence - L.chalumnae:281 P.pallidum:281

H3B812              	100.00%		D3BC64              	100.00%
Bootstrap support for H3B812 as seed ortholog is 100%.
Bootstrap support for D3BC64 as seed ortholog is 100%.

Group of orthologs #914. Best score 280 bits
Score difference with first non-orthologous sequence - L.chalumnae:280 P.pallidum:280

H2ZVQ5              	100.00%		D3BMA3              	100.00%
H3ATG8              	26.57%		
H3AW08              	26.16%		
H3AZR5              	14.31%		
H3AYP0              	14.03%		
Bootstrap support for H2ZVQ5 as seed ortholog is 100%.
Bootstrap support for D3BMA3 as seed ortholog is 100%.

Group of orthologs #915. Best score 280 bits
Score difference with first non-orthologous sequence - L.chalumnae:120 P.pallidum:48

H3AW20              	100.00%		D3B0H3              	100.00%
H3BB91              	42.11%		
H3ATF1              	40.13%		
H3BBM7              	29.61%		
H3ASP3              	7.89%		
Bootstrap support for H3AW20 as seed ortholog is 99%.
Bootstrap support for D3B0H3 as seed ortholog is 95%.

Group of orthologs #916. Best score 280 bits
Score difference with first non-orthologous sequence - L.chalumnae:164 P.pallidum:280

H2ZVL3              	100.00%		D3BBT8              	100.00%
Bootstrap support for H2ZVL3 as seed ortholog is 99%.
Bootstrap support for D3BBT8 as seed ortholog is 100%.

Group of orthologs #917. Best score 280 bits
Score difference with first non-orthologous sequence - L.chalumnae:235 P.pallidum:280

H2ZU07              	100.00%		D3BSE8              	100.00%
Bootstrap support for H2ZU07 as seed ortholog is 100%.
Bootstrap support for D3BSE8 as seed ortholog is 100%.

Group of orthologs #918. Best score 280 bits
Score difference with first non-orthologous sequence - L.chalumnae:280 P.pallidum:280

H3ANL2              	100.00%		D3B954              	100.00%
Bootstrap support for H3ANL2 as seed ortholog is 100%.
Bootstrap support for D3B954 as seed ortholog is 100%.

Group of orthologs #919. Best score 279 bits
Score difference with first non-orthologous sequence - L.chalumnae:32 P.pallidum:279

H2ZXY3              	100.00%		D3B2U8              	100.00%
H3AL65              	23.51%		
H3AK84              	13.95%		
M3XKG6              	5.43%		
Bootstrap support for H2ZXY3 as seed ortholog is 75%.
Bootstrap support for D3B2U8 as seed ortholog is 100%.

Group of orthologs #920. Best score 279 bits
Score difference with first non-orthologous sequence - L.chalumnae:207 P.pallidum:279

H3AUL6              	100.00%		D3B101              	100.00%
H2ZX11              	28.31%		
Bootstrap support for H3AUL6 as seed ortholog is 99%.
Bootstrap support for D3B101 as seed ortholog is 100%.

Group of orthologs #921. Best score 279 bits
Score difference with first non-orthologous sequence - L.chalumnae:162 P.pallidum:279

H2ZWY8              	100.00%		D3B961              	100.00%
Bootstrap support for H2ZWY8 as seed ortholog is 99%.
Bootstrap support for D3B961 as seed ortholog is 100%.

Group of orthologs #922. Best score 279 bits
Score difference with first non-orthologous sequence - L.chalumnae:223 P.pallidum:69

H3B2Z2              	100.00%		D3B668              	100.00%
Bootstrap support for H3B2Z2 as seed ortholog is 100%.
Bootstrap support for D3B668 as seed ortholog is 99%.

Group of orthologs #923. Best score 279 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 P.pallidum:279

H3B2S1              	100.00%		D3BCJ7              	100.00%
Bootstrap support for H3B2S1 as seed ortholog is 100%.
Bootstrap support for D3BCJ7 as seed ortholog is 100%.

Group of orthologs #924. Best score 279 bits
Score difference with first non-orthologous sequence - L.chalumnae:279 P.pallidum:279

H3BI89              	100.00%		D3BML5              	100.00%
Bootstrap support for H3BI89 as seed ortholog is 100%.
Bootstrap support for D3BML5 as seed ortholog is 100%.

Group of orthologs #925. Best score 278 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 P.pallidum:114

H3A696              	100.00%		D3AYN1              	100.00%
H3BFG6              	23.38%		
Bootstrap support for H3A696 as seed ortholog is 94%.
Bootstrap support for D3AYN1 as seed ortholog is 99%.

Group of orthologs #926. Best score 278 bits
Score difference with first non-orthologous sequence - L.chalumnae:98 P.pallidum:278

H2ZX24              	100.00%		D3BIM4              	100.00%
Bootstrap support for H2ZX24 as seed ortholog is 96%.
Bootstrap support for D3BIM4 as seed ortholog is 100%.

Group of orthologs #927. Best score 278 bits
Score difference with first non-orthologous sequence - L.chalumnae:278 P.pallidum:278

H3AE96              	100.00%		D3BA10              	100.00%
Bootstrap support for H3AE96 as seed ortholog is 100%.
Bootstrap support for D3BA10 as seed ortholog is 100%.

Group of orthologs #928. Best score 278 bits
Score difference with first non-orthologous sequence - L.chalumnae:278 P.pallidum:278

H3BHX9              	100.00%		D3B2Q1              	100.00%
Bootstrap support for H3BHX9 as seed ortholog is 100%.
Bootstrap support for D3B2Q1 as seed ortholog is 100%.

Group of orthologs #929. Best score 278 bits
Score difference with first non-orthologous sequence - L.chalumnae:278 P.pallidum:278

H3BGK2              	100.00%		D3BC65              	100.00%
Bootstrap support for H3BGK2 as seed ortholog is 100%.
Bootstrap support for D3BC65 as seed ortholog is 100%.

Group of orthologs #930. Best score 277 bits
Score difference with first non-orthologous sequence - L.chalumnae:277 P.pallidum:277

H2ZW28              	100.00%		D3AZM2              	100.00%
Bootstrap support for H2ZW28 as seed ortholog is 100%.
Bootstrap support for D3AZM2 as seed ortholog is 100%.

Group of orthologs #931. Best score 277 bits
Score difference with first non-orthologous sequence - L.chalumnae:277 P.pallidum:277

H2ZXW5              	100.00%		D3BRI8              	100.00%
Bootstrap support for H2ZXW5 as seed ortholog is 100%.
Bootstrap support for D3BRI8 as seed ortholog is 100%.

Group of orthologs #932. Best score 277 bits
Score difference with first non-orthologous sequence - L.chalumnae:277 P.pallidum:277

H3ADA6              	100.00%		D3BUW3              	100.00%
Bootstrap support for H3ADA6 as seed ortholog is 100%.
Bootstrap support for D3BUW3 as seed ortholog is 100%.

Group of orthologs #933. Best score 276 bits
Score difference with first non-orthologous sequence - L.chalumnae:276 P.pallidum:276

H3AT34              	100.00%		D3BNT3              	100.00%
Bootstrap support for H3AT34 as seed ortholog is 100%.
Bootstrap support for D3BNT3 as seed ortholog is 100%.

Group of orthologs #934. Best score 276 bits
Score difference with first non-orthologous sequence - L.chalumnae:215 P.pallidum:276

H3B3L9              	100.00%		D3BM61              	100.00%
Bootstrap support for H3B3L9 as seed ortholog is 100%.
Bootstrap support for D3BM61 as seed ortholog is 100%.

Group of orthologs #935. Best score 275 bits
Score difference with first non-orthologous sequence - L.chalumnae:275 P.pallidum:275

H3B5Y9              	100.00%		D3BFG6              	100.00%
H3BHB0              	36.07%		
Bootstrap support for H3B5Y9 as seed ortholog is 100%.
Bootstrap support for D3BFG6 as seed ortholog is 100%.

Group of orthologs #936. Best score 275 bits
Score difference with first non-orthologous sequence - L.chalumnae:275 P.pallidum:275

H3AU89              	100.00%		D3B114              	100.00%
Bootstrap support for H3AU89 as seed ortholog is 100%.
Bootstrap support for D3B114 as seed ortholog is 100%.

Group of orthologs #937. Best score 275 bits
Score difference with first non-orthologous sequence - L.chalumnae:275 P.pallidum:275

H3ANN4              	100.00%		D3BK44              	100.00%
Bootstrap support for H3ANN4 as seed ortholog is 100%.
Bootstrap support for D3BK44 as seed ortholog is 100%.

Group of orthologs #938. Best score 275 bits
Score difference with first non-orthologous sequence - L.chalumnae:275 P.pallidum:226

M3XKL4              	100.00%		D3AW43              	100.00%
Bootstrap support for M3XKL4 as seed ortholog is 100%.
Bootstrap support for D3AW43 as seed ortholog is 100%.

Group of orthologs #939. Best score 275 bits
Score difference with first non-orthologous sequence - L.chalumnae:275 P.pallidum:275

H3BG28              	100.00%		D3B9Y2              	100.00%
Bootstrap support for H3BG28 as seed ortholog is 100%.
Bootstrap support for D3B9Y2 as seed ortholog is 100%.

Group of orthologs #940. Best score 275 bits
Score difference with first non-orthologous sequence - L.chalumnae:275 P.pallidum:275

H3B2C3              	100.00%		D3BQU0              	100.00%
Bootstrap support for H3B2C3 as seed ortholog is 100%.
Bootstrap support for D3BQU0 as seed ortholog is 100%.

Group of orthologs #941. Best score 275 bits
Score difference with first non-orthologous sequence - L.chalumnae:275 P.pallidum:275

H3BG55              	100.00%		D3BQQ9              	100.00%
Bootstrap support for H3BG55 as seed ortholog is 100%.
Bootstrap support for D3BQQ9 as seed ortholog is 100%.

Group of orthologs #942. Best score 274 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.pallidum:274

H3ADG4              	100.00%		D3B849              	100.00%
H3AVM2              	13.62%		
Bootstrap support for H3ADG4 as seed ortholog is 95%.
Bootstrap support for D3B849 as seed ortholog is 100%.

Group of orthologs #943. Best score 274 bits
Score difference with first non-orthologous sequence - L.chalumnae:274 P.pallidum:274

H3B195              	100.00%		D3B205              	100.00%
                    	       		D3B2A7              	44.38%
Bootstrap support for H3B195 as seed ortholog is 100%.
Bootstrap support for D3B205 as seed ortholog is 100%.

Group of orthologs #944. Best score 274 bits
Score difference with first non-orthologous sequence - L.chalumnae:274 P.pallidum:274

H3BBP1              	100.00%		D3AWA1              	100.00%
Bootstrap support for H3BBP1 as seed ortholog is 100%.
Bootstrap support for D3AWA1 as seed ortholog is 100%.

Group of orthologs #945. Best score 274 bits
Score difference with first non-orthologous sequence - L.chalumnae:274 P.pallidum:274

H3AAB6              	100.00%		D3BTW3              	100.00%
Bootstrap support for H3AAB6 as seed ortholog is 100%.
Bootstrap support for D3BTW3 as seed ortholog is 100%.

Group of orthologs #946. Best score 274 bits
Score difference with first non-orthologous sequence - L.chalumnae:274 P.pallidum:274

M3XJN2              	100.00%		D3AWV5              	100.00%
Bootstrap support for M3XJN2 as seed ortholog is 100%.
Bootstrap support for D3AWV5 as seed ortholog is 100%.

Group of orthologs #947. Best score 274 bits
Score difference with first non-orthologous sequence - L.chalumnae:274 P.pallidum:274

H3AJU8              	100.00%		D3BSQ9              	100.00%
Bootstrap support for H3AJU8 as seed ortholog is 100%.
Bootstrap support for D3BSQ9 as seed ortholog is 100%.

Group of orthologs #948. Best score 274 bits
Score difference with first non-orthologous sequence - L.chalumnae:274 P.pallidum:274

H3BET1              	100.00%		D3B3T5              	100.00%
Bootstrap support for H3BET1 as seed ortholog is 100%.
Bootstrap support for D3B3T5 as seed ortholog is 100%.

Group of orthologs #949. Best score 272 bits
Score difference with first non-orthologous sequence - L.chalumnae:34 P.pallidum:107

H3B1N9              	100.00%		D3BCQ0              	100.00%
H3AE58              	27.14%		
Bootstrap support for H3B1N9 as seed ortholog is 72%.
Alternative seed ortholog is M3XJQ9 (34 bits away from this cluster)
Bootstrap support for D3BCQ0 as seed ortholog is 97%.

Group of orthologs #950. Best score 272 bits
Score difference with first non-orthologous sequence - L.chalumnae:158 P.pallidum:137

H3AZV5              	100.00%		D3BL52              	100.00%
Bootstrap support for H3AZV5 as seed ortholog is 100%.
Bootstrap support for D3BL52 as seed ortholog is 99%.

Group of orthologs #951. Best score 272 bits
Score difference with first non-orthologous sequence - L.chalumnae:272 P.pallidum:272

H3B9U7              	100.00%		D3BM11              	100.00%
Bootstrap support for H3B9U7 as seed ortholog is 100%.
Bootstrap support for D3BM11 as seed ortholog is 100%.

Group of orthologs #952. Best score 271 bits
Score difference with first non-orthologous sequence - L.chalumnae:271 P.pallidum:271

H3BG01              	100.00%		D3BIA4              	100.00%
H3BE45              	51.80%		
Bootstrap support for H3BG01 as seed ortholog is 100%.
Bootstrap support for D3BIA4 as seed ortholog is 100%.

Group of orthologs #953. Best score 271 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.pallidum:271

H2ZVH2              	100.00%		D3AVG3              	100.00%
Bootstrap support for H2ZVH2 as seed ortholog is 98%.
Bootstrap support for D3AVG3 as seed ortholog is 100%.

Group of orthologs #954. Best score 270 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 P.pallidum:105

H3ANM8              	100.00%		D3BBG2              	100.00%
H3BI60              	54.04%		
H3A6H8              	50.93%		
H3AAT1              	30.43%		
Bootstrap support for H3ANM8 as seed ortholog is 99%.
Bootstrap support for D3BBG2 as seed ortholog is 99%.

Group of orthologs #955. Best score 270 bits
Score difference with first non-orthologous sequence - L.chalumnae:270 P.pallidum:270

H3AA58              	100.00%		D3B631              	100.00%
Bootstrap support for H3AA58 as seed ortholog is 100%.
Bootstrap support for D3B631 as seed ortholog is 100%.

Group of orthologs #956. Best score 270 bits
Score difference with first non-orthologous sequence - L.chalumnae:270 P.pallidum:270

H3A5Q2              	100.00%		D3BLP1              	100.00%
Bootstrap support for H3A5Q2 as seed ortholog is 100%.
Bootstrap support for D3BLP1 as seed ortholog is 100%.

Group of orthologs #957. Best score 270 bits
Score difference with first non-orthologous sequence - L.chalumnae:270 P.pallidum:270

H3AWP6              	100.00%		D3AZZ3              	100.00%
Bootstrap support for H3AWP6 as seed ortholog is 100%.
Bootstrap support for D3AZZ3 as seed ortholog is 100%.

Group of orthologs #958. Best score 270 bits
Score difference with first non-orthologous sequence - L.chalumnae:270 P.pallidum:270

H3AV88              	100.00%		D3BV59              	100.00%
Bootstrap support for H3AV88 as seed ortholog is 100%.
Bootstrap support for D3BV59 as seed ortholog is 100%.

Group of orthologs #959. Best score 270 bits
Score difference with first non-orthologous sequence - L.chalumnae:212 P.pallidum:196

H3BCH7              	100.00%		D3BKV9              	100.00%
Bootstrap support for H3BCH7 as seed ortholog is 99%.
Bootstrap support for D3BKV9 as seed ortholog is 99%.

Group of orthologs #960. Best score 269 bits
Score difference with first non-orthologous sequence - L.chalumnae:269 P.pallidum:269

H3B5R5              	100.00%		D3BMD5              	100.00%
H3BB55              	30.59%		
H3B391              	12.94%		
Bootstrap support for H3B5R5 as seed ortholog is 100%.
Bootstrap support for D3BMD5 as seed ortholog is 100%.

Group of orthologs #961. Best score 269 bits
Score difference with first non-orthologous sequence - L.chalumnae:269 P.pallidum:269

H3BG19              	100.00%		D3BVI7              	100.00%
H3AP22              	46.75%		
H3ALC0              	44.78%		
Bootstrap support for H3BG19 as seed ortholog is 100%.
Bootstrap support for D3BVI7 as seed ortholog is 100%.

Group of orthologs #962. Best score 269 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 P.pallidum:130

H3ASG5              	100.00%		D3AY23              	100.00%
H3APZ9              	14.40%		
Bootstrap support for H3ASG5 as seed ortholog is 100%.
Bootstrap support for D3AY23 as seed ortholog is 99%.

Group of orthologs #963. Best score 269 bits
Score difference with first non-orthologous sequence - L.chalumnae:222 P.pallidum:160

H2ZRK8              	100.00%		D3B972              	100.00%
Bootstrap support for H2ZRK8 as seed ortholog is 100%.
Bootstrap support for D3B972 as seed ortholog is 100%.

Group of orthologs #964. Best score 269 bits
Score difference with first non-orthologous sequence - L.chalumnae:269 P.pallidum:269

H3A4P7              	100.00%		D3AZH8              	100.00%
Bootstrap support for H3A4P7 as seed ortholog is 100%.
Bootstrap support for D3AZH8 as seed ortholog is 100%.

Group of orthologs #965. Best score 269 bits
Score difference with first non-orthologous sequence - L.chalumnae:269 P.pallidum:269

H3AM99              	100.00%		D3BCA4              	100.00%
Bootstrap support for H3AM99 as seed ortholog is 100%.
Bootstrap support for D3BCA4 as seed ortholog is 100%.

Group of orthologs #966. Best score 269 bits
Score difference with first non-orthologous sequence - L.chalumnae:269 P.pallidum:269

H3BAF0              	100.00%		D3AWH8              	100.00%
Bootstrap support for H3BAF0 as seed ortholog is 100%.
Bootstrap support for D3AWH8 as seed ortholog is 100%.

Group of orthologs #967. Best score 269 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.pallidum:171

H3AYP1              	100.00%		D3BL98              	100.00%
Bootstrap support for H3AYP1 as seed ortholog is 88%.
Bootstrap support for D3BL98 as seed ortholog is 99%.

Group of orthologs #968. Best score 268 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.pallidum:43

M3XHF0              	100.00%		D3BNY2              	100.00%
M3XI07              	17.14%		
H3A6M6              	17.14%		
Bootstrap support for M3XHF0 as seed ortholog is 93%.
Bootstrap support for D3BNY2 as seed ortholog is 94%.

Group of orthologs #969. Best score 268 bits
Score difference with first non-orthologous sequence - L.chalumnae:268 P.pallidum:268

H3AC76              	100.00%		D3BBM0              	100.00%
M3XL92              	41.89%		
Bootstrap support for H3AC76 as seed ortholog is 100%.
Bootstrap support for D3BBM0 as seed ortholog is 100%.

Group of orthologs #970. Best score 268 bits
Score difference with first non-orthologous sequence - L.chalumnae:176 P.pallidum:268

H2ZZ84              	100.00%		D3B7Q8              	100.00%
Bootstrap support for H2ZZ84 as seed ortholog is 100%.
Bootstrap support for D3B7Q8 as seed ortholog is 100%.

Group of orthologs #971. Best score 268 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.pallidum:268

H3BCZ3              	100.00%		D3BH44              	100.00%
Bootstrap support for H3BCZ3 as seed ortholog is 95%.
Bootstrap support for D3BH44 as seed ortholog is 100%.

Group of orthologs #972. Best score 267 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.pallidum:54

H3A6I1              	100.00%		D3BKT2              	100.00%
H3BH41              	36.63%		
Bootstrap support for H3A6I1 as seed ortholog is 94%.
Bootstrap support for D3BKT2 as seed ortholog is 95%.

Group of orthologs #973. Best score 267 bits
Score difference with first non-orthologous sequence - L.chalumnae:267 P.pallidum:114

H3ARN2              	100.00%		D3BM76              	100.00%
H2ZZJ1              	32.14%		
Bootstrap support for H3ARN2 as seed ortholog is 100%.
Bootstrap support for D3BM76 as seed ortholog is 99%.

Group of orthologs #974. Best score 267 bits
Score difference with first non-orthologous sequence - L.chalumnae:220 P.pallidum:267

H2ZWS6              	100.00%		D3BAW0              	100.00%
Bootstrap support for H2ZWS6 as seed ortholog is 100%.
Bootstrap support for D3BAW0 as seed ortholog is 100%.

Group of orthologs #975. Best score 266 bits
Score difference with first non-orthologous sequence - L.chalumnae:266 P.pallidum:186

H3AHP7              	100.00%		D3B5G1              	100.00%
                    	       		D3BB79              	14.52%
Bootstrap support for H3AHP7 as seed ortholog is 100%.
Bootstrap support for D3B5G1 as seed ortholog is 100%.

Group of orthologs #976. Best score 266 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 P.pallidum:123

H3AFV5              	100.00%		D3BFN3              	100.00%
H3AVS9              	57.43%		
Bootstrap support for H3AFV5 as seed ortholog is 79%.
Bootstrap support for D3BFN3 as seed ortholog is 99%.

Group of orthologs #977. Best score 266 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.pallidum:108

M3XI55              	100.00%		D3BBP5              	100.00%
H3A7Z6              	32.84%		
Bootstrap support for M3XI55 as seed ortholog is 100%.
Bootstrap support for D3BBP5 as seed ortholog is 100%.

Group of orthologs #978. Best score 266 bits
Score difference with first non-orthologous sequence - L.chalumnae:266 P.pallidum:266

H3A7D7              	100.00%		D3BT25              	100.00%
Bootstrap support for H3A7D7 as seed ortholog is 100%.
Bootstrap support for D3BT25 as seed ortholog is 100%.

Group of orthologs #979. Best score 266 bits
Score difference with first non-orthologous sequence - L.chalumnae:266 P.pallidum:266

H3B0S8              	100.00%		D3BG58              	100.00%
Bootstrap support for H3B0S8 as seed ortholog is 100%.
Bootstrap support for D3BG58 as seed ortholog is 100%.

Group of orthologs #980. Best score 266 bits
Score difference with first non-orthologous sequence - L.chalumnae:266 P.pallidum:266

H3B814              	100.00%		D3BHR5              	100.00%
Bootstrap support for H3B814 as seed ortholog is 100%.
Bootstrap support for D3BHR5 as seed ortholog is 100%.

Group of orthologs #981. Best score 265 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.pallidum:265

H3ASL0              	100.00%		D3B9B5              	100.00%
H3BE93              	36.63%		
H2ZUW1              	18.85%		
H3A3A3              	6.99%		
Bootstrap support for H3ASL0 as seed ortholog is 91%.
Bootstrap support for D3B9B5 as seed ortholog is 100%.

Group of orthologs #982. Best score 265 bits
Score difference with first non-orthologous sequence - L.chalumnae:265 P.pallidum:265

H3A140              	100.00%		D3BB37              	100.00%
H3A948              	42.75%		
Bootstrap support for H3A140 as seed ortholog is 100%.
Bootstrap support for D3BB37 as seed ortholog is 100%.

Group of orthologs #983. Best score 265 bits
Score difference with first non-orthologous sequence - L.chalumnae:265 P.pallidum:265

H3AMD1              	100.00%		D3BG08              	100.00%
H3B8W2              	27.38%		
Bootstrap support for H3AMD1 as seed ortholog is 100%.
Bootstrap support for D3BG08 as seed ortholog is 100%.

Group of orthologs #984. Best score 265 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 P.pallidum:265

H3ANZ3              	100.00%		D3BUK1              	100.00%
Bootstrap support for H3ANZ3 as seed ortholog is 85%.
Bootstrap support for D3BUK1 as seed ortholog is 100%.

Group of orthologs #985. Best score 264 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 P.pallidum:42

H3AWA9              	100.00%		D3BL86              	100.00%
H3ABH0              	11.49%		
Bootstrap support for H3AWA9 as seed ortholog is 99%.
Bootstrap support for D3BL86 as seed ortholog is 96%.

Group of orthologs #986. Best score 264 bits
Score difference with first non-orthologous sequence - L.chalumnae:264 P.pallidum:264

H3BCQ6              	100.00%		D3BNG5              	100.00%
H3AZT4              	77.81%		
Bootstrap support for H3BCQ6 as seed ortholog is 100%.
Bootstrap support for D3BNG5 as seed ortholog is 100%.

Group of orthologs #987. Best score 264 bits
Score difference with first non-orthologous sequence - L.chalumnae:264 P.pallidum:264

H2ZZL7              	100.00%		D3B1F0              	100.00%
Bootstrap support for H2ZZL7 as seed ortholog is 100%.
Bootstrap support for D3B1F0 as seed ortholog is 100%.

Group of orthologs #988. Best score 264 bits
Score difference with first non-orthologous sequence - L.chalumnae:264 P.pallidum:264

H2ZX23              	100.00%		D3BKL8              	100.00%
Bootstrap support for H2ZX23 as seed ortholog is 100%.
Bootstrap support for D3BKL8 as seed ortholog is 100%.

Group of orthologs #989. Best score 264 bits
Score difference with first non-orthologous sequence - L.chalumnae:264 P.pallidum:264

H3ANJ4              	100.00%		D3B247              	100.00%
Bootstrap support for H3ANJ4 as seed ortholog is 100%.
Bootstrap support for D3B247 as seed ortholog is 100%.

Group of orthologs #990. Best score 264 bits
Score difference with first non-orthologous sequence - L.chalumnae:264 P.pallidum:264

H3ALU3              	100.00%		D3B8K8              	100.00%
Bootstrap support for H3ALU3 as seed ortholog is 100%.
Bootstrap support for D3B8K8 as seed ortholog is 100%.

Group of orthologs #991. Best score 264 bits
Score difference with first non-orthologous sequence - L.chalumnae:264 P.pallidum:264

H3B831              	100.00%		D3AW31              	100.00%
Bootstrap support for H3B831 as seed ortholog is 100%.
Bootstrap support for D3AW31 as seed ortholog is 100%.

Group of orthologs #992. Best score 264 bits
Score difference with first non-orthologous sequence - L.chalumnae:264 P.pallidum:264

H3AP00              	100.00%		D3BEH6              	100.00%
Bootstrap support for H3AP00 as seed ortholog is 100%.
Bootstrap support for D3BEH6 as seed ortholog is 100%.

Group of orthologs #993. Best score 264 bits
Score difference with first non-orthologous sequence - L.chalumnae:264 P.pallidum:264

H3AAR4              	100.00%		D3BQV8              	100.00%
Bootstrap support for H3AAR4 as seed ortholog is 100%.
Bootstrap support for D3BQV8 as seed ortholog is 100%.

Group of orthologs #994. Best score 264 bits
Score difference with first non-orthologous sequence - L.chalumnae:264 P.pallidum:264

H3AQW0              	100.00%		D3BIG5              	100.00%
Bootstrap support for H3AQW0 as seed ortholog is 100%.
Bootstrap support for D3BIG5 as seed ortholog is 100%.

Group of orthologs #995. Best score 264 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.pallidum:141

H3BDP3              	100.00%		D3BQN8              	100.00%
Bootstrap support for H3BDP3 as seed ortholog is 97%.
Bootstrap support for D3BQN8 as seed ortholog is 100%.

Group of orthologs #996. Best score 263 bits
Score difference with first non-orthologous sequence - L.chalumnae:263 P.pallidum:7

H2ZYK7              	100.00%		D3BGF6              	100.00%
Bootstrap support for H2ZYK7 as seed ortholog is 100%.
Bootstrap support for D3BGF6 as seed ortholog is 56%.
Alternative seed ortholog is D3AZS9 (7 bits away from this cluster)

Group of orthologs #997. Best score 263 bits
Score difference with first non-orthologous sequence - L.chalumnae:150 P.pallidum:157

H3ARP2              	100.00%		D3BHT9              	100.00%
Bootstrap support for H3ARP2 as seed ortholog is 99%.
Bootstrap support for D3BHT9 as seed ortholog is 100%.

Group of orthologs #998. Best score 263 bits
Score difference with first non-orthologous sequence - L.chalumnae:263 P.pallidum:263

H3BHY8              	100.00%		D3BR69              	100.00%
Bootstrap support for H3BHY8 as seed ortholog is 100%.
Bootstrap support for D3BR69 as seed ortholog is 100%.

Group of orthologs #999. Best score 262 bits
Score difference with first non-orthologous sequence - L.chalumnae:178 P.pallidum:262

H3AWN7              	100.00%		D3BP85              	100.00%
H2ZVG0              	54.19%		
H3B8T2              	45.71%		
Bootstrap support for H3AWN7 as seed ortholog is 100%.
Bootstrap support for D3BP85 as seed ortholog is 100%.

Group of orthologs #1000. Best score 262 bits
Score difference with first non-orthologous sequence - L.chalumnae:189 P.pallidum:262

H3ADP2              	100.00%		D3B0Y6              	100.00%
M3XH93              	53.99%		
Bootstrap support for H3ADP2 as seed ortholog is 99%.
Bootstrap support for D3B0Y6 as seed ortholog is 100%.

Group of orthologs #1001. Best score 262 bits
Score difference with first non-orthologous sequence - L.chalumnae:262 P.pallidum:262

H3AIG7              	100.00%		D3B1L8              	100.00%
H3ABI1              	33.10%		
Bootstrap support for H3AIG7 as seed ortholog is 100%.
Bootstrap support for D3B1L8 as seed ortholog is 100%.

Group of orthologs #1002. Best score 262 bits
Score difference with first non-orthologous sequence - L.chalumnae:262 P.pallidum:190

H3AL93              	100.00%		D3B3F5              	100.00%
H3AJX9              	20.25%		
Bootstrap support for H3AL93 as seed ortholog is 100%.
Bootstrap support for D3B3F5 as seed ortholog is 100%.

Group of orthologs #1003. Best score 262 bits
Score difference with first non-orthologous sequence - L.chalumnae:262 P.pallidum:262

H3A9A6              	100.00%		D3AZ34              	100.00%
Bootstrap support for H3A9A6 as seed ortholog is 100%.
Bootstrap support for D3AZ34 as seed ortholog is 100%.

Group of orthologs #1004. Best score 262 bits
Score difference with first non-orthologous sequence - L.chalumnae:262 P.pallidum:262

H3BE03              	100.00%		D3AXC6              	100.00%
Bootstrap support for H3BE03 as seed ortholog is 100%.
Bootstrap support for D3AXC6 as seed ortholog is 100%.

Group of orthologs #1005. Best score 262 bits
Score difference with first non-orthologous sequence - L.chalumnae:213 P.pallidum:262

H3BEZ9              	100.00%		D3AXP5              	100.00%
Bootstrap support for H3BEZ9 as seed ortholog is 100%.
Bootstrap support for D3AXP5 as seed ortholog is 100%.

Group of orthologs #1006. Best score 262 bits
Score difference with first non-orthologous sequence - L.chalumnae:262 P.pallidum:262

H3AQ54              	100.00%		D3BLX9              	100.00%
Bootstrap support for H3AQ54 as seed ortholog is 100%.
Bootstrap support for D3BLX9 as seed ortholog is 100%.

Group of orthologs #1007. Best score 262 bits
Score difference with first non-orthologous sequence - L.chalumnae:262 P.pallidum:262

H3BBU9              	100.00%		D3B4F5              	100.00%
Bootstrap support for H3BBU9 as seed ortholog is 100%.
Bootstrap support for D3B4F5 as seed ortholog is 100%.

Group of orthologs #1008. Best score 262 bits
Score difference with first non-orthologous sequence - L.chalumnae:262 P.pallidum:262

H3ATS9              	100.00%		D3BQX5              	100.00%
Bootstrap support for H3ATS9 as seed ortholog is 100%.
Bootstrap support for D3BQX5 as seed ortholog is 100%.

Group of orthologs #1009. Best score 261 bits
Score difference with first non-orthologous sequence - L.chalumnae:38 P.pallidum:44

M3XJS0              	100.00%		D3BC33              	100.00%
H3BGF4              	100.00%		D3AW67              	100.00%
H3BGF2              	56.10%		D3BUL8              	88.24%
                    	       		D3BFS2              	82.35%
                    	       		D3B8J3              	81.51%
                    	       		D3B5I9              	15.97%
Bootstrap support for M3XJS0 as seed ortholog is 95%.
Bootstrap support for H3BGF4 as seed ortholog is 91%.
Bootstrap support for D3BC33 as seed ortholog is 98%.
Bootstrap support for D3AW67 as seed ortholog is 95%.

Group of orthologs #1010. Best score 261 bits
Score difference with first non-orthologous sequence - L.chalumnae:207 P.pallidum:168

H3AN26              	100.00%		D3BNI9              	100.00%
H3B040              	18.62%		
Bootstrap support for H3AN26 as seed ortholog is 100%.
Bootstrap support for D3BNI9 as seed ortholog is 100%.

Group of orthologs #1011. Best score 261 bits
Score difference with first non-orthologous sequence - L.chalumnae:261 P.pallidum:261

H2ZZY9              	100.00%		D3B1B1              	100.00%
Bootstrap support for H2ZZY9 as seed ortholog is 100%.
Bootstrap support for D3B1B1 as seed ortholog is 100%.

Group of orthologs #1012. Best score 261 bits
Score difference with first non-orthologous sequence - L.chalumnae:261 P.pallidum:125

H3AQV2              	100.00%		D3B5G2              	100.00%
Bootstrap support for H3AQV2 as seed ortholog is 100%.
Bootstrap support for D3B5G2 as seed ortholog is 99%.

Group of orthologs #1013. Best score 261 bits
Score difference with first non-orthologous sequence - L.chalumnae:261 P.pallidum:261

H3AAR1              	100.00%		D3BJY4              	100.00%
Bootstrap support for H3AAR1 as seed ortholog is 100%.
Bootstrap support for D3BJY4 as seed ortholog is 100%.

Group of orthologs #1014. Best score 260 bits
Score difference with first non-orthologous sequence - L.chalumnae:260 P.pallidum:260

H3BCV6              	100.00%		D3BAB9              	100.00%
H3ACC2              	28.04%		D3B9C5              	14.74%
H3ABF8              	11.54%		
Bootstrap support for H3BCV6 as seed ortholog is 100%.
Bootstrap support for D3BAB9 as seed ortholog is 100%.

Group of orthologs #1015. Best score 260 bits
Score difference with first non-orthologous sequence - L.chalumnae:260 P.pallidum:260

H2ZW53              	100.00%		D3BS90              	100.00%
Bootstrap support for H2ZW53 as seed ortholog is 100%.
Bootstrap support for D3BS90 as seed ortholog is 100%.

Group of orthologs #1016. Best score 259 bits
Score difference with first non-orthologous sequence - L.chalumnae:259 P.pallidum:259

H2ZXQ3              	100.00%		D3AXM4              	100.00%
Bootstrap support for H2ZXQ3 as seed ortholog is 100%.
Bootstrap support for D3AXM4 as seed ortholog is 100%.

Group of orthologs #1017. Best score 259 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.pallidum:128

H2ZXF2              	100.00%		D3BM92              	100.00%
Bootstrap support for H2ZXF2 as seed ortholog is 99%.
Bootstrap support for D3BM92 as seed ortholog is 99%.

Group of orthologs #1018. Best score 259 bits
Score difference with first non-orthologous sequence - L.chalumnae:259 P.pallidum:259

H3BHH6              	100.00%		D3BHV4              	100.00%
Bootstrap support for H3BHH6 as seed ortholog is 100%.
Bootstrap support for D3BHV4 as seed ortholog is 100%.

Group of orthologs #1019. Best score 257 bits
Score difference with first non-orthologous sequence - L.chalumnae:257 P.pallidum:257

H3ANS2              	100.00%		D3AYQ3              	100.00%
Bootstrap support for H3ANS2 as seed ortholog is 100%.
Bootstrap support for D3AYQ3 as seed ortholog is 100%.

Group of orthologs #1020. Best score 256 bits
Score difference with first non-orthologous sequence - L.chalumnae:173 P.pallidum:160

H3A7U7              	100.00%		D3BAT4              	100.00%
Bootstrap support for H3A7U7 as seed ortholog is 100%.
Bootstrap support for D3BAT4 as seed ortholog is 100%.

Group of orthologs #1021. Best score 256 bits
Score difference with first non-orthologous sequence - L.chalumnae:256 P.pallidum:256

H2ZT65              	100.00%		D3BU70              	100.00%
Bootstrap support for H2ZT65 as seed ortholog is 100%.
Bootstrap support for D3BU70 as seed ortholog is 100%.

Group of orthologs #1022. Best score 256 bits
Score difference with first non-orthologous sequence - L.chalumnae:188 P.pallidum:256

H3AEW1              	100.00%		D3BS99              	100.00%
Bootstrap support for H3AEW1 as seed ortholog is 100%.
Bootstrap support for D3BS99 as seed ortholog is 100%.

Group of orthologs #1023. Best score 256 bits
Score difference with first non-orthologous sequence - L.chalumnae:256 P.pallidum:256

H3AQL2              	100.00%		D3BTV2              	100.00%
Bootstrap support for H3AQL2 as seed ortholog is 100%.
Bootstrap support for D3BTV2 as seed ortholog is 100%.

Group of orthologs #1024. Best score 256 bits
Score difference with first non-orthologous sequence - L.chalumnae:199 P.pallidum:147

H3BE64              	100.00%		D3BTY6              	100.00%
Bootstrap support for H3BE64 as seed ortholog is 99%.
Bootstrap support for D3BTY6 as seed ortholog is 99%.

Group of orthologs #1025. Best score 255 bits
Score difference with first non-orthologous sequence - L.chalumnae:189 P.pallidum:255

H3A5G1              	100.00%		D3B4M1              	100.00%
H3AVJ1              	58.41%		
Bootstrap support for H3A5G1 as seed ortholog is 100%.
Bootstrap support for D3B4M1 as seed ortholog is 100%.

Group of orthologs #1026. Best score 255 bits
Score difference with first non-orthologous sequence - L.chalumnae:255 P.pallidum:255

H3AT04              	100.00%		D3B4U3              	100.00%
H3BBM6              	38.53%		
Bootstrap support for H3AT04 as seed ortholog is 100%.
Bootstrap support for D3B4U3 as seed ortholog is 100%.

Group of orthologs #1027. Best score 255 bits
Score difference with first non-orthologous sequence - L.chalumnae:9 P.pallidum:194

H2ZYG0              	100.00%		D3BEP4              	100.00%
Bootstrap support for H2ZYG0 as seed ortholog is 65%.
Alternative seed ortholog is H3B406 (9 bits away from this cluster)
Bootstrap support for D3BEP4 as seed ortholog is 100%.

Group of orthologs #1028. Best score 255 bits
Score difference with first non-orthologous sequence - L.chalumnae:255 P.pallidum:255

H3B4M5              	100.00%		D3BSK6              	100.00%
Bootstrap support for H3B4M5 as seed ortholog is 100%.
Bootstrap support for D3BSK6 as seed ortholog is 100%.

Group of orthologs #1029. Best score 254 bits
Score difference with first non-orthologous sequence - L.chalumnae:35 P.pallidum:20

H3ABP6              	100.00%		D3B5V9              	100.00%
H3AR17              	46.43%		
H3ANT9              	43.45%		
Bootstrap support for H3ABP6 as seed ortholog is 85%.
Bootstrap support for D3B5V9 as seed ortholog is 71%.
Alternative seed ortholog is D3B1S2 (20 bits away from this cluster)

Group of orthologs #1030. Best score 254 bits
Score difference with first non-orthologous sequence - L.chalumnae:254 P.pallidum:254

H3BIG8              	100.00%		D3BK89              	100.00%
H3AR22              	21.72%		
Bootstrap support for H3BIG8 as seed ortholog is 100%.
Bootstrap support for D3BK89 as seed ortholog is 100%.

Group of orthologs #1031. Best score 254 bits
Score difference with first non-orthologous sequence - L.chalumnae:254 P.pallidum:254

H3AB87              	100.00%		D3BBF0              	100.00%
Bootstrap support for H3AB87 as seed ortholog is 100%.
Bootstrap support for D3BBF0 as seed ortholog is 100%.

Group of orthologs #1032. Best score 254 bits
Score difference with first non-orthologous sequence - L.chalumnae:254 P.pallidum:254

H3AEV0              	100.00%		D3BLW1              	100.00%
Bootstrap support for H3AEV0 as seed ortholog is 100%.
Bootstrap support for D3BLW1 as seed ortholog is 100%.

Group of orthologs #1033. Best score 254 bits
Score difference with first non-orthologous sequence - L.chalumnae:254 P.pallidum:254

H3BA94              	100.00%		D3B5S9              	100.00%
Bootstrap support for H3BA94 as seed ortholog is 100%.
Bootstrap support for D3B5S9 as seed ortholog is 100%.

Group of orthologs #1034. Best score 253 bits
Score difference with first non-orthologous sequence - L.chalumnae:253 P.pallidum:253

H3B034              	100.00%		D3BJU2              	100.00%
H3BDM9              	88.52%		
H3A2Q5              	81.12%		
H3AWC0              	77.79%		
Bootstrap support for H3B034 as seed ortholog is 100%.
Bootstrap support for D3BJU2 as seed ortholog is 100%.

Group of orthologs #1035. Best score 253 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 P.pallidum:253

H3AIU2              	100.00%		D3BBQ7              	100.00%
H3AWH0              	56.34%		
Bootstrap support for H3AIU2 as seed ortholog is 100%.
Bootstrap support for D3BBQ7 as seed ortholog is 100%.

Group of orthologs #1036. Best score 253 bits
Score difference with first non-orthologous sequence - L.chalumnae:253 P.pallidum:253

H3B245              	100.00%		D3B3N7              	100.00%
                    	       		D3B7G1              	17.04%
Bootstrap support for H3B245 as seed ortholog is 100%.
Bootstrap support for D3B3N7 as seed ortholog is 100%.

Group of orthologs #1037. Best score 252 bits
Score difference with first non-orthologous sequence - L.chalumnae:252 P.pallidum:252

H3ARZ7              	100.00%		D3B0E0              	100.00%
H3BGK0              	26.13%		
Bootstrap support for H3ARZ7 as seed ortholog is 100%.
Bootstrap support for D3B0E0 as seed ortholog is 100%.

Group of orthologs #1038. Best score 252 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 P.pallidum:252

H2ZZE7              	100.00%		D3AYY9              	100.00%
Bootstrap support for H2ZZE7 as seed ortholog is 94%.
Bootstrap support for D3AYY9 as seed ortholog is 100%.

Group of orthologs #1039. Best score 252 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 P.pallidum:187

H3A1W6              	100.00%		D3BU79              	100.00%
Bootstrap support for H3A1W6 as seed ortholog is 100%.
Bootstrap support for D3BU79 as seed ortholog is 100%.

Group of orthologs #1040. Best score 252 bits
Score difference with first non-orthologous sequence - L.chalumnae:252 P.pallidum:252

H3AFA9              	100.00%		D3BK02              	100.00%
Bootstrap support for H3AFA9 as seed ortholog is 100%.
Bootstrap support for D3BK02 as seed ortholog is 100%.

Group of orthologs #1041. Best score 251 bits
Score difference with first non-orthologous sequence - L.chalumnae:251 P.pallidum:251

H3BFG1              	100.00%		D3AZ59              	100.00%
                    	       		D3AZ60              	60.84%
Bootstrap support for H3BFG1 as seed ortholog is 100%.
Bootstrap support for D3AZ59 as seed ortholog is 100%.

Group of orthologs #1042. Best score 251 bits
Score difference with first non-orthologous sequence - L.chalumnae:251 P.pallidum:251

H3AAL4              	100.00%		D3B171              	100.00%
Bootstrap support for H3AAL4 as seed ortholog is 100%.
Bootstrap support for D3B171 as seed ortholog is 100%.

Group of orthologs #1043. Best score 251 bits
Score difference with first non-orthologous sequence - L.chalumnae:17 P.pallidum:79

H3A7H1              	100.00%		D3BGI7              	100.00%
Bootstrap support for H3A7H1 as seed ortholog is 81%.
Bootstrap support for D3BGI7 as seed ortholog is 99%.

Group of orthologs #1044. Best score 251 bits
Score difference with first non-orthologous sequence - L.chalumnae:251 P.pallidum:251

H3A9D3              	100.00%		D3BLD1              	100.00%
Bootstrap support for H3A9D3 as seed ortholog is 100%.
Bootstrap support for D3BLD1 as seed ortholog is 100%.

Group of orthologs #1045. Best score 251 bits
Score difference with first non-orthologous sequence - L.chalumnae:251 P.pallidum:99

H3B6V8              	100.00%		D3BU03              	100.00%
Bootstrap support for H3B6V8 as seed ortholog is 100%.
Bootstrap support for D3BU03 as seed ortholog is 99%.

Group of orthologs #1046. Best score 251 bits
Score difference with first non-orthologous sequence - L.chalumnae:23 P.pallidum:110

H3BBF7              	100.00%		D3BV70              	100.00%
Bootstrap support for H3BBF7 as seed ortholog is 38%.
Alternative seed ortholog is H3AW12 (23 bits away from this cluster)
Bootstrap support for D3BV70 as seed ortholog is 96%.

Group of orthologs #1047. Best score 250 bits
Score difference with first non-orthologous sequence - L.chalumnae:250 P.pallidum:250

H3AC93              	100.00%		D3B130              	100.00%
M3XII5              	13.96%		
Bootstrap support for H3AC93 as seed ortholog is 100%.
Bootstrap support for D3B130 as seed ortholog is 100%.

Group of orthologs #1048. Best score 250 bits
Score difference with first non-orthologous sequence - L.chalumnae:178 P.pallidum:107

H3A5R8              	100.00%		D3BJX9              	100.00%
Bootstrap support for H3A5R8 as seed ortholog is 100%.
Bootstrap support for D3BJX9 as seed ortholog is 99%.

Group of orthologs #1049. Best score 250 bits
Score difference with first non-orthologous sequence - L.chalumnae:250 P.pallidum:250

H3B1S7              	100.00%		D3BF03              	100.00%
Bootstrap support for H3B1S7 as seed ortholog is 100%.
Bootstrap support for D3BF03 as seed ortholog is 100%.

Group of orthologs #1050. Best score 250 bits
Score difference with first non-orthologous sequence - L.chalumnae:20 P.pallidum:250

H3ANZ8              	100.00%		D3BR73              	100.00%
Bootstrap support for H3ANZ8 as seed ortholog is 71%.
Alternative seed ortholog is H3A0Q2 (20 bits away from this cluster)
Bootstrap support for D3BR73 as seed ortholog is 100%.

Group of orthologs #1051. Best score 249 bits
Score difference with first non-orthologous sequence - L.chalumnae:249 P.pallidum:249

H3AB75              	100.00%		D3AWL9              	100.00%
H3AE82              	30.34%		
M3XI70              	23.03%		
Bootstrap support for H3AB75 as seed ortholog is 100%.
Bootstrap support for D3AWL9 as seed ortholog is 100%.

Group of orthologs #1052. Best score 248 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 P.pallidum:248

H3AC26              	100.00%		D3B0H8              	100.00%
H3AY00              	100.00%		D3BN01              	26.54%
H3BE97              	19.23%		
H3AKS6              	17.31%		
Bootstrap support for H3AC26 as seed ortholog is 99%.
Bootstrap support for H3AY00 as seed ortholog is 99%.
Bootstrap support for D3B0H8 as seed ortholog is 100%.

Group of orthologs #1053. Best score 248 bits
Score difference with first non-orthologous sequence - L.chalumnae:33 P.pallidum:112

H3AH33              	100.00%		D3BEL5              	100.00%
H3AN19              	29.36%		
Bootstrap support for H3AH33 as seed ortholog is 71%.
Alternative seed ortholog is M3XJQ9 (33 bits away from this cluster)
Bootstrap support for D3BEL5 as seed ortholog is 98%.

Group of orthologs #1054. Best score 248 bits
Score difference with first non-orthologous sequence - L.chalumnae:248 P.pallidum:248

H3ASB6              	100.00%		D3BBH0              	100.00%
H3ARM7              	47.76%		
Bootstrap support for H3ASB6 as seed ortholog is 100%.
Bootstrap support for D3BBH0 as seed ortholog is 100%.

Group of orthologs #1055. Best score 248 bits
Score difference with first non-orthologous sequence - L.chalumnae:190 P.pallidum:194

H3AWG7              	100.00%		D3BT42              	100.00%
                    	       		D3BT43              	85.34%
Bootstrap support for H3AWG7 as seed ortholog is 100%.
Bootstrap support for D3BT42 as seed ortholog is 100%.

Group of orthologs #1056. Best score 248 bits
Score difference with first non-orthologous sequence - L.chalumnae:248 P.pallidum:248

H2ZRL8              	100.00%		D3BE93              	100.00%
Bootstrap support for H2ZRL8 as seed ortholog is 100%.
Bootstrap support for D3BE93 as seed ortholog is 100%.

Group of orthologs #1057. Best score 248 bits
Score difference with first non-orthologous sequence - L.chalumnae:248 P.pallidum:248

H3AQQ9              	100.00%		D3B447              	100.00%
Bootstrap support for H3AQQ9 as seed ortholog is 100%.
Bootstrap support for D3B447 as seed ortholog is 100%.

Group of orthologs #1058. Best score 248 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 P.pallidum:117

H3ASF2              	100.00%		D3B3Z5              	100.00%
Bootstrap support for H3ASF2 as seed ortholog is 99%.
Bootstrap support for D3B3Z5 as seed ortholog is 99%.

Group of orthologs #1059. Best score 248 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 P.pallidum:248

H3ATA4              	100.00%		D3B429              	100.00%
Bootstrap support for H3ATA4 as seed ortholog is 98%.
Bootstrap support for D3B429 as seed ortholog is 100%.

Group of orthologs #1060. Best score 248 bits
Score difference with first non-orthologous sequence - L.chalumnae:248 P.pallidum:117

H3ACS3              	100.00%		D3BVF2              	100.00%
Bootstrap support for H3ACS3 as seed ortholog is 100%.
Bootstrap support for D3BVF2 as seed ortholog is 98%.

Group of orthologs #1061. Best score 248 bits
Score difference with first non-orthologous sequence - L.chalumnae:36 P.pallidum:38

H3ARE9              	100.00%		D3BQE6              	100.00%
Bootstrap support for H3ARE9 as seed ortholog is 92%.
Bootstrap support for D3BQE6 as seed ortholog is 94%.

Group of orthologs #1062. Best score 248 bits
Score difference with first non-orthologous sequence - L.chalumnae:248 P.pallidum:248

H3AQY9              	100.00%		D3BQU8              	100.00%
Bootstrap support for H3AQY9 as seed ortholog is 100%.
Bootstrap support for D3BQU8 as seed ortholog is 100%.

Group of orthologs #1063. Best score 248 bits
Score difference with first non-orthologous sequence - L.chalumnae:160 P.pallidum:168

H3B6K3              	100.00%		D3BUV0              	100.00%
Bootstrap support for H3B6K3 as seed ortholog is 100%.
Bootstrap support for D3BUV0 as seed ortholog is 100%.

Group of orthologs #1064. Best score 247 bits
Score difference with first non-orthologous sequence - L.chalumnae:157 P.pallidum:34

H2ZYV5              	100.00%		D3BMB7              	100.00%
H3AHC5              	33.03%		
H3AN94              	20.93%		
Bootstrap support for H2ZYV5 as seed ortholog is 100%.
Bootstrap support for D3BMB7 as seed ortholog is 60%.
Alternative seed ortholog is D3B233 (34 bits away from this cluster)

Group of orthologs #1065. Best score 247 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 P.pallidum:65

M3XHT1              	100.00%		D3B0N1              	100.00%
H3ANU5              	94.12%		
H3B917              	83.82%		
Bootstrap support for M3XHT1 as seed ortholog is 100%.
Bootstrap support for D3B0N1 as seed ortholog is 99%.

Group of orthologs #1066. Best score 247 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.pallidum:139

H3A0G9              	100.00%		D3BCA6              	100.00%
Bootstrap support for H3A0G9 as seed ortholog is 99%.
Bootstrap support for D3BCA6 as seed ortholog is 99%.

Group of orthologs #1067. Best score 247 bits
Score difference with first non-orthologous sequence - L.chalumnae:247 P.pallidum:247

H3AU35              	100.00%		D3BRZ4              	100.00%
Bootstrap support for H3AU35 as seed ortholog is 100%.
Bootstrap support for D3BRZ4 as seed ortholog is 100%.

Group of orthologs #1068. Best score 246 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 P.pallidum:52

H3AAU3              	100.00%		D3BHN6              	100.00%
H3BFG2              	47.17%		
H2ZV12              	33.18%		
H3A9Y4              	24.21%		
H3APD8              	19.42%		
H2ZS54              	16.98%		
Bootstrap support for H3AAU3 as seed ortholog is 84%.
Bootstrap support for D3BHN6 as seed ortholog is 89%.

Group of orthologs #1069. Best score 246 bits
Score difference with first non-orthologous sequence - L.chalumnae:246 P.pallidum:18

H3BBH0              	100.00%		D3B3C1              	100.00%
H3ALH7              	25.77%		
Bootstrap support for H3BBH0 as seed ortholog is 100%.
Bootstrap support for D3B3C1 as seed ortholog is 71%.
Alternative seed ortholog is D3BL07 (18 bits away from this cluster)

Group of orthologs #1070. Best score 246 bits
Score difference with first non-orthologous sequence - L.chalumnae:159 P.pallidum:246

H3A1U1              	100.00%		D3BCW0              	100.00%
Bootstrap support for H3A1U1 as seed ortholog is 100%.
Bootstrap support for D3BCW0 as seed ortholog is 100%.

Group of orthologs #1071. Best score 246 bits
Score difference with first non-orthologous sequence - L.chalumnae:246 P.pallidum:246

H3BB46              	100.00%		D3BUX7              	100.00%
Bootstrap support for H3BB46 as seed ortholog is 100%.
Bootstrap support for D3BUX7 as seed ortholog is 100%.

Group of orthologs #1072. Best score 245 bits
Score difference with first non-orthologous sequence - L.chalumnae:245 P.pallidum:139

H3B1W4              	100.00%		D3AZ65              	100.00%
H3AAP0              	64.48%		
H2ZRP5              	17.49%		
Bootstrap support for H3B1W4 as seed ortholog is 100%.
Bootstrap support for D3AZ65 as seed ortholog is 100%.

Group of orthologs #1073. Best score 245 bits
Score difference with first non-orthologous sequence - L.chalumnae:245 P.pallidum:245

H2ZWU0              	100.00%		D3B4H6              	100.00%
H3AQH1              	57.43%		
Bootstrap support for H2ZWU0 as seed ortholog is 100%.
Bootstrap support for D3B4H6 as seed ortholog is 100%.

Group of orthologs #1074. Best score 245 bits
Score difference with first non-orthologous sequence - L.chalumnae:245 P.pallidum:245

H2ZY81              	100.00%		D3AYZ5              	100.00%
Bootstrap support for H2ZY81 as seed ortholog is 100%.
Bootstrap support for D3AYZ5 as seed ortholog is 100%.

Group of orthologs #1075. Best score 245 bits
Score difference with first non-orthologous sequence - L.chalumnae:245 P.pallidum:245

H3A2U3              	100.00%		D3AXH6              	100.00%
Bootstrap support for H3A2U3 as seed ortholog is 100%.
Bootstrap support for D3AXH6 as seed ortholog is 100%.

Group of orthologs #1076. Best score 245 bits
Score difference with first non-orthologous sequence - L.chalumnae:245 P.pallidum:245

H3A461              	100.00%		D3BC68              	100.00%
Bootstrap support for H3A461 as seed ortholog is 100%.
Bootstrap support for D3BC68 as seed ortholog is 100%.

Group of orthologs #1077. Best score 245 bits
Score difference with first non-orthologous sequence - L.chalumnae:245 P.pallidum:245

H3AIF3              	100.00%		D3B734              	100.00%
Bootstrap support for H3AIF3 as seed ortholog is 100%.
Bootstrap support for D3B734 as seed ortholog is 100%.

Group of orthologs #1078. Best score 245 bits
Score difference with first non-orthologous sequence - L.chalumnae:143 P.pallidum:36

H3B402              	100.00%		D3B5M9              	100.00%
Bootstrap support for H3B402 as seed ortholog is 99%.
Bootstrap support for D3B5M9 as seed ortholog is 79%.

Group of orthologs #1079. Best score 245 bits
Score difference with first non-orthologous sequence - L.chalumnae:245 P.pallidum:245

H3B105              	100.00%		D3BN80              	100.00%
Bootstrap support for H3B105 as seed ortholog is 100%.
Bootstrap support for D3BN80 as seed ortholog is 100%.

Group of orthologs #1080. Best score 245 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 P.pallidum:69

H3BFJ0              	100.00%		D3BGH1              	100.00%
Bootstrap support for H3BFJ0 as seed ortholog is 99%.
Bootstrap support for D3BGH1 as seed ortholog is 99%.

Group of orthologs #1081. Best score 244 bits
Score difference with first non-orthologous sequence - L.chalumnae:26 P.pallidum:129

H3BB07              	100.00%		D3B128              	100.00%
H3ADC3              	42.47%		
H3AUW7              	42.43%		
H3A2Q8              	25.46%		
Bootstrap support for H3BB07 as seed ortholog is 81%.
Bootstrap support for D3B128 as seed ortholog is 99%.

Group of orthologs #1082. Best score 244 bits
Score difference with first non-orthologous sequence - L.chalumnae:244 P.pallidum:244

H3AFY8              	100.00%		D3B5F9              	100.00%
Bootstrap support for H3AFY8 as seed ortholog is 100%.
Bootstrap support for D3B5F9 as seed ortholog is 100%.

Group of orthologs #1083. Best score 244 bits
Score difference with first non-orthologous sequence - L.chalumnae:244 P.pallidum:244

H3B7W6              	100.00%		D3B465              	100.00%
Bootstrap support for H3B7W6 as seed ortholog is 100%.
Bootstrap support for D3B465 as seed ortholog is 100%.

Group of orthologs #1084. Best score 243 bits
Score difference with first non-orthologous sequence - L.chalumnae:243 P.pallidum:243

H3AAV8              	100.00%		D3B782              	100.00%
                    	       		D3AX99              	55.68%
Bootstrap support for H3AAV8 as seed ortholog is 100%.
Bootstrap support for D3B782 as seed ortholog is 100%.

Group of orthologs #1085. Best score 243 bits
Score difference with first non-orthologous sequence - L.chalumnae:243 P.pallidum:243

H3BBH1              	100.00%		D3B2Q7              	100.00%
H3A5J3              	28.40%		
Bootstrap support for H3BBH1 as seed ortholog is 100%.
Bootstrap support for D3B2Q7 as seed ortholog is 100%.

Group of orthologs #1086. Best score 243 bits
Score difference with first non-orthologous sequence - L.chalumnae:243 P.pallidum:243

H3BEZ8              	100.00%		D3BK06              	100.00%
Bootstrap support for H3BEZ8 as seed ortholog is 100%.
Bootstrap support for D3BK06 as seed ortholog is 100%.

Group of orthologs #1087. Best score 242 bits
Score difference with first non-orthologous sequence - L.chalumnae:242 P.pallidum:194

H3A1D0              	100.00%		D3AWU6              	100.00%
                    	       		D3AWU5              	27.27%
Bootstrap support for H3A1D0 as seed ortholog is 100%.
Bootstrap support for D3AWU6 as seed ortholog is 100%.

Group of orthologs #1088. Best score 242 bits
Score difference with first non-orthologous sequence - L.chalumnae:242 P.pallidum:242

H3A9M3              	100.00%		D3B4M5              	100.00%
Bootstrap support for H3A9M3 as seed ortholog is 100%.
Bootstrap support for D3B4M5 as seed ortholog is 100%.

Group of orthologs #1089. Best score 242 bits
Score difference with first non-orthologous sequence - L.chalumnae:40 P.pallidum:75

H3A4Z4              	100.00%		D3BCP7              	100.00%
Bootstrap support for H3A4Z4 as seed ortholog is 88%.
Bootstrap support for D3BCP7 as seed ortholog is 99%.

Group of orthologs #1090. Best score 242 bits
Score difference with first non-orthologous sequence - L.chalumnae:242 P.pallidum:242

H3AUV5              	100.00%		D3BHQ3              	100.00%
Bootstrap support for H3AUV5 as seed ortholog is 100%.
Bootstrap support for D3BHQ3 as seed ortholog is 100%.

Group of orthologs #1091. Best score 242 bits
Score difference with first non-orthologous sequence - L.chalumnae:242 P.pallidum:242

H3BAI1              	100.00%		D3B4U2              	100.00%
Bootstrap support for H3BAI1 as seed ortholog is 100%.
Bootstrap support for D3B4U2 as seed ortholog is 100%.

Group of orthologs #1092. Best score 242 bits
Score difference with first non-orthologous sequence - L.chalumnae:242 P.pallidum:242

M3XIA9              	100.00%		D3B9J0              	100.00%
Bootstrap support for M3XIA9 as seed ortholog is 100%.
Bootstrap support for D3B9J0 as seed ortholog is 100%.

Group of orthologs #1093. Best score 242 bits
Score difference with first non-orthologous sequence - L.chalumnae:242 P.pallidum:242

H3BG39              	100.00%		D3BHJ8              	100.00%
Bootstrap support for H3BG39 as seed ortholog is 100%.
Bootstrap support for D3BHJ8 as seed ortholog is 100%.

Group of orthologs #1094. Best score 241 bits
Score difference with first non-orthologous sequence - L.chalumnae:241 P.pallidum:50

H3A653              	100.00%		D3B3T2              	100.00%
H3AL00              	40.35%		
H3A708              	10.88%		
Bootstrap support for H3A653 as seed ortholog is 100%.
Bootstrap support for D3B3T2 as seed ortholog is 97%.

Group of orthologs #1095. Best score 241 bits
Score difference with first non-orthologous sequence - L.chalumnae:241 P.pallidum:241

H3B751              	100.00%		D3BV90              	100.00%
Bootstrap support for H3B751 as seed ortholog is 100%.
Bootstrap support for D3BV90 as seed ortholog is 100%.

Group of orthologs #1096. Best score 240 bits
Score difference with first non-orthologous sequence - L.chalumnae:240 P.pallidum:240

H3A0E8              	100.00%		D3BAX5              	100.00%
H2ZWV6              	41.90%		D3BIJ6              	22.23%
Bootstrap support for H3A0E8 as seed ortholog is 100%.
Bootstrap support for D3BAX5 as seed ortholog is 100%.

Group of orthologs #1097. Best score 240 bits
Score difference with first non-orthologous sequence - L.chalumnae:240 P.pallidum:26

H3BFI5              	100.00%		D3BRB5              	100.00%
H3BEB7              	24.65%		D3BLU7              	37.58%
Bootstrap support for H3BFI5 as seed ortholog is 100%.
Bootstrap support for D3BRB5 as seed ortholog is 59%.
Alternative seed ortholog is D3BEY0 (26 bits away from this cluster)

Group of orthologs #1098. Best score 240 bits
Score difference with first non-orthologous sequence - L.chalumnae:240 P.pallidum:166

H2ZVQ9              	100.00%		D3B6A7              	100.00%
H3AQR4              	57.54%		
Bootstrap support for H2ZVQ9 as seed ortholog is 100%.
Bootstrap support for D3B6A7 as seed ortholog is 100%.

Group of orthologs #1099. Best score 240 bits
Score difference with first non-orthologous sequence - L.chalumnae:240 P.pallidum:240

H3A2W0              	100.00%		D3B4Y2              	100.00%
Bootstrap support for H3A2W0 as seed ortholog is 100%.
Bootstrap support for D3B4Y2 as seed ortholog is 100%.

Group of orthologs #1100. Best score 240 bits
Score difference with first non-orthologous sequence - L.chalumnae:240 P.pallidum:240

H2ZYU5              	100.00%		D3BIR3              	100.00%
Bootstrap support for H2ZYU5 as seed ortholog is 100%.
Bootstrap support for D3BIR3 as seed ortholog is 100%.

Group of orthologs #1101. Best score 240 bits
Score difference with first non-orthologous sequence - L.chalumnae:240 P.pallidum:240

H3B0K1              	100.00%		D3B0K1              	100.00%
Bootstrap support for H3B0K1 as seed ortholog is 100%.
Bootstrap support for D3B0K1 as seed ortholog is 100%.

Group of orthologs #1102. Best score 240 bits
Score difference with first non-orthologous sequence - L.chalumnae:240 P.pallidum:240

H3AR89              	100.00%		D3BL35              	100.00%
Bootstrap support for H3AR89 as seed ortholog is 100%.
Bootstrap support for D3BL35 as seed ortholog is 100%.

Group of orthologs #1103. Best score 240 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.pallidum:92

M3XK55              	100.00%		D3AY59              	100.00%
Bootstrap support for M3XK55 as seed ortholog is 99%.
Bootstrap support for D3AY59 as seed ortholog is 99%.

Group of orthologs #1104. Best score 240 bits
Score difference with first non-orthologous sequence - L.chalumnae:240 P.pallidum:240

H3BFS3              	100.00%		D3BV19              	100.00%
Bootstrap support for H3BFS3 as seed ortholog is 100%.
Bootstrap support for D3BV19 as seed ortholog is 100%.

Group of orthologs #1105. Best score 239 bits
Score difference with first non-orthologous sequence - L.chalumnae:239 P.pallidum:239

H3AX22              	100.00%		D3B454              	100.00%
Bootstrap support for H3AX22 as seed ortholog is 100%.
Bootstrap support for D3B454 as seed ortholog is 100%.

Group of orthologs #1106. Best score 239 bits
Score difference with first non-orthologous sequence - L.chalumnae:239 P.pallidum:239

H3AGJ0              	100.00%		D3BSH6              	100.00%
Bootstrap support for H3AGJ0 as seed ortholog is 100%.
Bootstrap support for D3BSH6 as seed ortholog is 100%.

Group of orthologs #1107. Best score 239 bits
Score difference with first non-orthologous sequence - L.chalumnae:193 P.pallidum:239

M3XIH8              	100.00%		D3B2F2              	100.00%
Bootstrap support for M3XIH8 as seed ortholog is 99%.
Bootstrap support for D3B2F2 as seed ortholog is 100%.

Group of orthologs #1108. Best score 238 bits
Score difference with first non-orthologous sequence - L.chalumnae:238 P.pallidum:238

H3AHR4              	100.00%		D3AYZ9              	100.00%
H3ANV4              	53.40%		
Bootstrap support for H3AHR4 as seed ortholog is 100%.
Bootstrap support for D3AYZ9 as seed ortholog is 100%.

Group of orthologs #1109. Best score 238 bits
Score difference with first non-orthologous sequence - L.chalumnae:238 P.pallidum:238

H3AH88              	100.00%		D3B1R4              	100.00%
H3AYR4              	11.45%		
Bootstrap support for H3AH88 as seed ortholog is 100%.
Bootstrap support for D3B1R4 as seed ortholog is 100%.

Group of orthologs #1110. Best score 238 bits
Score difference with first non-orthologous sequence - L.chalumnae:162 P.pallidum:49

H3BE85              	100.00%		D3AVM4              	100.00%
H3AI10              	66.95%		
Bootstrap support for H3BE85 as seed ortholog is 100%.
Bootstrap support for D3AVM4 as seed ortholog is 88%.

Group of orthologs #1111. Best score 238 bits
Score difference with first non-orthologous sequence - L.chalumnae:238 P.pallidum:238

H3A607              	100.00%		D3B059              	100.00%
Bootstrap support for H3A607 as seed ortholog is 100%.
Bootstrap support for D3B059 as seed ortholog is 100%.

Group of orthologs #1112. Best score 238 bits
Score difference with first non-orthologous sequence - L.chalumnae:238 P.pallidum:238

H3AJU0              	100.00%		D3B137              	100.00%
Bootstrap support for H3AJU0 as seed ortholog is 100%.
Bootstrap support for D3B137 as seed ortholog is 100%.

Group of orthologs #1113. Best score 238 bits
Score difference with first non-orthologous sequence - L.chalumnae:238 P.pallidum:238

H3AQH8              	100.00%		D3BE64              	100.00%
Bootstrap support for H3AQH8 as seed ortholog is 100%.
Bootstrap support for D3BE64 as seed ortholog is 100%.

Group of orthologs #1114. Best score 238 bits
Score difference with first non-orthologous sequence - L.chalumnae:238 P.pallidum:238

M3XGI7              	100.00%		D3AZV9              	100.00%
Bootstrap support for M3XGI7 as seed ortholog is 100%.
Bootstrap support for D3AZV9 as seed ortholog is 100%.

Group of orthologs #1115. Best score 238 bits
Score difference with first non-orthologous sequence - L.chalumnae:238 P.pallidum:238

H3BC11              	100.00%		D3B885              	100.00%
Bootstrap support for H3BC11 as seed ortholog is 100%.
Bootstrap support for D3B885 as seed ortholog is 100%.

Group of orthologs #1116. Best score 237 bits
Score difference with first non-orthologous sequence - L.chalumnae:237 P.pallidum:237

H3B5N5              	100.00%		D3B8K5              	100.00%
H3ASG0              	53.92%		
Bootstrap support for H3B5N5 as seed ortholog is 100%.
Bootstrap support for D3B8K5 as seed ortholog is 100%.

Group of orthologs #1117. Best score 237 bits
Score difference with first non-orthologous sequence - L.chalumnae:237 P.pallidum:237

H3BAB0              	100.00%		D3BFK6              	100.00%
H3BHN8              	57.93%		
Bootstrap support for H3BAB0 as seed ortholog is 100%.
Bootstrap support for D3BFK6 as seed ortholog is 100%.

Group of orthologs #1118. Best score 237 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 P.pallidum:90

H3BG70              	100.00%		D3BQB0              	100.00%
H3BGR3              	39.28%		
Bootstrap support for H3BG70 as seed ortholog is 99%.
Bootstrap support for D3BQB0 as seed ortholog is 98%.

Group of orthologs #1119. Best score 237 bits
Score difference with first non-orthologous sequence - L.chalumnae:177 P.pallidum:237

H2ZSL4              	100.00%		D3AYL4              	100.00%
Bootstrap support for H2ZSL4 as seed ortholog is 99%.
Bootstrap support for D3AYL4 as seed ortholog is 100%.

Group of orthologs #1120. Best score 237 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.pallidum:237

H3AS92              	100.00%		D3B895              	100.00%
Bootstrap support for H3AS92 as seed ortholog is 94%.
Bootstrap support for D3B895 as seed ortholog is 100%.

Group of orthologs #1121. Best score 237 bits
Score difference with first non-orthologous sequence - L.chalumnae:237 P.pallidum:237

H3B9R6              	100.00%		D3B151              	100.00%
Bootstrap support for H3B9R6 as seed ortholog is 100%.
Bootstrap support for D3B151 as seed ortholog is 100%.

Group of orthologs #1122. Best score 237 bits
Score difference with first non-orthologous sequence - L.chalumnae:2 P.pallidum:237

H3BCH4              	100.00%		D3B0L6              	100.00%
Bootstrap support for H3BCH4 as seed ortholog is 57%.
Alternative seed ortholog is H2ZU00 (2 bits away from this cluster)
Bootstrap support for D3B0L6 as seed ortholog is 100%.

Group of orthologs #1123. Best score 236 bits
Score difference with first non-orthologous sequence - L.chalumnae:236 P.pallidum:236

H3B2K1              	100.00%		D3BP97              	100.00%
H3ACY5              	63.24%		
H3AI63              	54.66%		
Bootstrap support for H3B2K1 as seed ortholog is 100%.
Bootstrap support for D3BP97 as seed ortholog is 100%.

Group of orthologs #1124. Best score 236 bits
Score difference with first non-orthologous sequence - L.chalumnae:236 P.pallidum:236

H2ZSH0              	100.00%		D3BND0              	100.00%
Bootstrap support for H2ZSH0 as seed ortholog is 100%.
Bootstrap support for D3BND0 as seed ortholog is 100%.

Group of orthologs #1125. Best score 236 bits
Score difference with first non-orthologous sequence - L.chalumnae:236 P.pallidum:236

H3AF45              	100.00%		D3BK40              	100.00%
Bootstrap support for H3AF45 as seed ortholog is 100%.
Bootstrap support for D3BK40 as seed ortholog is 100%.

Group of orthologs #1126. Best score 236 bits
Score difference with first non-orthologous sequence - L.chalumnae:236 P.pallidum:236

H3BCJ6              	100.00%		D3AWZ9              	100.00%
Bootstrap support for H3BCJ6 as seed ortholog is 100%.
Bootstrap support for D3AWZ9 as seed ortholog is 100%.

Group of orthologs #1127. Best score 235 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 P.pallidum:118

H3B7X0              	100.00%		D3BAP8              	100.00%
H3BGU7              	58.25%		
H3ABV2              	36.00%		
Bootstrap support for H3B7X0 as seed ortholog is 99%.
Bootstrap support for D3BAP8 as seed ortholog is 99%.

Group of orthologs #1128. Best score 235 bits
Score difference with first non-orthologous sequence - L.chalumnae:100 P.pallidum:54

H3ANP2              	100.00%		D3BAM4              	100.00%
H3AK41              	37.05%		
Bootstrap support for H3ANP2 as seed ortholog is 99%.
Bootstrap support for D3BAM4 as seed ortholog is 90%.

Group of orthologs #1129. Best score 235 bits
Score difference with first non-orthologous sequence - L.chalumnae:31 P.pallidum:42

M3XLF6              	100.00%		D3BU57              	100.00%
H3ARW4              	5.88%		
Bootstrap support for M3XLF6 as seed ortholog is 92%.
Bootstrap support for D3BU57 as seed ortholog is 97%.

Group of orthologs #1130. Best score 235 bits
Score difference with first non-orthologous sequence - L.chalumnae:235 P.pallidum:235

H2ZSC3              	100.00%		D3B115              	100.00%
Bootstrap support for H2ZSC3 as seed ortholog is 100%.
Bootstrap support for D3B115 as seed ortholog is 100%.

Group of orthologs #1131. Best score 235 bits
Score difference with first non-orthologous sequence - L.chalumnae:235 P.pallidum:235

H3A3Y8              	100.00%		D3B8B3              	100.00%
Bootstrap support for H3A3Y8 as seed ortholog is 100%.
Bootstrap support for D3B8B3 as seed ortholog is 100%.

Group of orthologs #1132. Best score 235 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.pallidum:235

H3A2Z0              	100.00%		D3BVG5              	100.00%
Bootstrap support for H3A2Z0 as seed ortholog is 99%.
Bootstrap support for D3BVG5 as seed ortholog is 100%.

Group of orthologs #1133. Best score 235 bits
Score difference with first non-orthologous sequence - L.chalumnae:235 P.pallidum:235

H3B807              	100.00%		D3B7E0              	100.00%
Bootstrap support for H3B807 as seed ortholog is 100%.
Bootstrap support for D3B7E0 as seed ortholog is 100%.

Group of orthologs #1134. Best score 235 bits
Score difference with first non-orthologous sequence - L.chalumnae:235 P.pallidum:235

H3BI06              	100.00%		D3B9B9              	100.00%
Bootstrap support for H3BI06 as seed ortholog is 100%.
Bootstrap support for D3B9B9 as seed ortholog is 100%.

Group of orthologs #1135. Best score 235 bits
Score difference with first non-orthologous sequence - L.chalumnae:235 P.pallidum:235

H3B5P7              	100.00%		D3BKP9              	100.00%
Bootstrap support for H3B5P7 as seed ortholog is 100%.
Bootstrap support for D3BKP9 as seed ortholog is 100%.

Group of orthologs #1136. Best score 235 bits
Score difference with first non-orthologous sequence - L.chalumnae:235 P.pallidum:235

H3B3Y2              	100.00%		D3BRG1              	100.00%
Bootstrap support for H3B3Y2 as seed ortholog is 100%.
Bootstrap support for D3BRG1 as seed ortholog is 100%.

Group of orthologs #1137. Best score 234 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 P.pallidum:113

H3A801              	100.00%		D3AX98              	100.00%
Bootstrap support for H3A801 as seed ortholog is 99%.
Bootstrap support for D3AX98 as seed ortholog is 100%.

Group of orthologs #1138. Best score 234 bits
Score difference with first non-orthologous sequence - L.chalumnae:234 P.pallidum:234

H3ACR5              	100.00%		D3BH65              	100.00%
Bootstrap support for H3ACR5 as seed ortholog is 100%.
Bootstrap support for D3BH65 as seed ortholog is 100%.

Group of orthologs #1139. Best score 234 bits
Score difference with first non-orthologous sequence - L.chalumnae:234 P.pallidum:234

H3A915              	100.00%		D3BLP0              	100.00%
Bootstrap support for H3A915 as seed ortholog is 100%.
Bootstrap support for D3BLP0 as seed ortholog is 100%.

Group of orthologs #1140. Best score 233 bits
Score difference with first non-orthologous sequence - L.chalumnae:183 P.pallidum:233

H3AHU2              	100.00%		D3BHB9              	100.00%
H3A2K8              	12.39%		
Bootstrap support for H3AHU2 as seed ortholog is 100%.
Bootstrap support for D3BHB9 as seed ortholog is 100%.

Group of orthologs #1141. Best score 233 bits
Score difference with first non-orthologous sequence - L.chalumnae:233 P.pallidum:32

H3B9T5              	100.00%		D3BHE7              	100.00%
H3BD64              	37.03%		
Bootstrap support for H3B9T5 as seed ortholog is 100%.
Bootstrap support for D3BHE7 as seed ortholog is 72%.
Alternative seed ortholog is D3B5L0 (32 bits away from this cluster)

Group of orthologs #1142. Best score 233 bits
Score difference with first non-orthologous sequence - L.chalumnae:12 P.pallidum:23

M3XKG4              	100.00%		D3BQB6              	100.00%
                    	       		D3BQB2              	21.69%
Bootstrap support for M3XKG4 as seed ortholog is 63%.
Alternative seed ortholog is H3AK82 (12 bits away from this cluster)
Bootstrap support for D3BQB6 as seed ortholog is 69%.
Alternative seed ortholog is D3B4H8 (23 bits away from this cluster)

Group of orthologs #1143. Best score 233 bits
Score difference with first non-orthologous sequence - L.chalumnae:233 P.pallidum:233

H3A7U5              	100.00%		D3B264              	100.00%
Bootstrap support for H3A7U5 as seed ortholog is 100%.
Bootstrap support for D3B264 as seed ortholog is 100%.

Group of orthologs #1144. Best score 233 bits
Score difference with first non-orthologous sequence - L.chalumnae:233 P.pallidum:233

H3B495              	100.00%		D3AXW1              	100.00%
Bootstrap support for H3B495 as seed ortholog is 100%.
Bootstrap support for D3AXW1 as seed ortholog is 100%.

Group of orthologs #1145. Best score 233 bits
Score difference with first non-orthologous sequence - L.chalumnae:177 P.pallidum:165

H3ABL3              	100.00%		D3BV71              	100.00%
Bootstrap support for H3ABL3 as seed ortholog is 100%.
Bootstrap support for D3BV71 as seed ortholog is 99%.

Group of orthologs #1146. Best score 233 bits
Score difference with first non-orthologous sequence - L.chalumnae:233 P.pallidum:233

H3BGC1              	100.00%		D3B181              	100.00%
Bootstrap support for H3BGC1 as seed ortholog is 100%.
Bootstrap support for D3B181 as seed ortholog is 100%.

Group of orthologs #1147. Best score 232 bits
Score difference with first non-orthologous sequence - L.chalumnae:232 P.pallidum:232

H3AVR9              	100.00%		D3BQV5              	100.00%
H3AN42              	62.28%		
H3BB65              	44.39%		
H3AGR2              	40.00%		
Bootstrap support for H3AVR9 as seed ortholog is 100%.
Bootstrap support for D3BQV5 as seed ortholog is 100%.

Group of orthologs #1148. Best score 232 bits
Score difference with first non-orthologous sequence - L.chalumnae:13 P.pallidum:232

H3BB08              	100.00%		D3BK86              	100.00%
H3A5E0              	41.08%		D3BG73              	14.51%
H3BBD3              	5.49%		
Bootstrap support for H3BB08 as seed ortholog is 57%.
Alternative seed ortholog is H2ZVZ6 (13 bits away from this cluster)
Bootstrap support for D3BK86 as seed ortholog is 100%.

Group of orthologs #1149. Best score 232 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.pallidum:67

H3B5C8              	100.00%		D3AY70              	100.00%
H3B685              	35.66%		
Bootstrap support for H3B5C8 as seed ortholog is 99%.
Bootstrap support for D3AY70 as seed ortholog is 99%.

Group of orthologs #1150. Best score 232 bits
Score difference with first non-orthologous sequence - L.chalumnae:232 P.pallidum:232

H3BAP8              	100.00%		D3AZH4              	100.00%
H2ZV29              	41.73%		
Bootstrap support for H3BAP8 as seed ortholog is 100%.
Bootstrap support for D3AZH4 as seed ortholog is 100%.

Group of orthologs #1151. Best score 232 bits
Score difference with first non-orthologous sequence - L.chalumnae:232 P.pallidum:232

H2ZWN8              	100.00%		D3AYW2              	100.00%
Bootstrap support for H2ZWN8 as seed ortholog is 100%.
Bootstrap support for D3AYW2 as seed ortholog is 100%.

Group of orthologs #1152. Best score 232 bits
Score difference with first non-orthologous sequence - L.chalumnae:232 P.pallidum:232

H2ZZ59              	100.00%		D3B5I5              	100.00%
Bootstrap support for H2ZZ59 as seed ortholog is 100%.
Bootstrap support for D3B5I5 as seed ortholog is 100%.

Group of orthologs #1153. Best score 232 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 P.pallidum:114

H3AAC1              	100.00%		D3B9J8              	100.00%
Bootstrap support for H3AAC1 as seed ortholog is 99%.
Bootstrap support for D3B9J8 as seed ortholog is 99%.

Group of orthologs #1154. Best score 232 bits
Score difference with first non-orthologous sequence - L.chalumnae:232 P.pallidum:232

H3AM61              	100.00%		D3B0C3              	100.00%
Bootstrap support for H3AM61 as seed ortholog is 100%.
Bootstrap support for D3B0C3 as seed ortholog is 100%.

Group of orthologs #1155. Best score 232 bits
Score difference with first non-orthologous sequence - L.chalumnae:95 P.pallidum:78

H3A6U6              	100.00%		D3BEC0              	100.00%
Bootstrap support for H3A6U6 as seed ortholog is 98%.
Bootstrap support for D3BEC0 as seed ortholog is 98%.

Group of orthologs #1156. Best score 232 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 P.pallidum:146

H3A4T6              	100.00%		D3BJM0              	100.00%
Bootstrap support for H3A4T6 as seed ortholog is 99%.
Bootstrap support for D3BJM0 as seed ortholog is 99%.

Group of orthologs #1157. Best score 232 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 P.pallidum:181

H3AFW0              	100.00%		D3BC96              	100.00%
Bootstrap support for H3AFW0 as seed ortholog is 100%.
Bootstrap support for D3BC96 as seed ortholog is 100%.

Group of orthologs #1158. Best score 232 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.pallidum:232

H3BBA7              	100.00%		D3AXY6              	100.00%
Bootstrap support for H3BBA7 as seed ortholog is 66%.
Alternative seed ortholog is H3ACD6 (62 bits away from this cluster)
Bootstrap support for D3AXY6 as seed ortholog is 100%.

Group of orthologs #1159. Best score 232 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.pallidum:108

H3AF23              	100.00%		D3BR84              	100.00%
Bootstrap support for H3AF23 as seed ortholog is 100%.
Bootstrap support for D3BR84 as seed ortholog is 100%.

Group of orthologs #1160. Best score 232 bits
Score difference with first non-orthologous sequence - L.chalumnae:232 P.pallidum:232

H3AXZ2              	100.00%		D3BB78              	100.00%
Bootstrap support for H3AXZ2 as seed ortholog is 100%.
Bootstrap support for D3BB78 as seed ortholog is 100%.

Group of orthologs #1161. Best score 232 bits
Score difference with first non-orthologous sequence - L.chalumnae:232 P.pallidum:105

H3B5J4              	100.00%		D3B838              	100.00%
Bootstrap support for H3B5J4 as seed ortholog is 100%.
Bootstrap support for D3B838 as seed ortholog is 99%.

Group of orthologs #1162. Best score 232 bits
Score difference with first non-orthologous sequence - L.chalumnae:232 P.pallidum:232

H3AXY5              	100.00%		D3BF50              	100.00%
Bootstrap support for H3AXY5 as seed ortholog is 100%.
Bootstrap support for D3BF50 as seed ortholog is 100%.

Group of orthologs #1163. Best score 232 bits
Score difference with first non-orthologous sequence - L.chalumnae:232 P.pallidum:232

H3BGJ4              	100.00%		D3BT31              	100.00%
Bootstrap support for H3BGJ4 as seed ortholog is 100%.
Bootstrap support for D3BT31 as seed ortholog is 100%.

Group of orthologs #1164. Best score 231 bits
Score difference with first non-orthologous sequence - L.chalumnae:231 P.pallidum:231

H3AJA8              	100.00%		D3AW49              	100.00%
Bootstrap support for H3AJA8 as seed ortholog is 100%.
Bootstrap support for D3AW49 as seed ortholog is 100%.

Group of orthologs #1165. Best score 231 bits
Score difference with first non-orthologous sequence - L.chalumnae:175 P.pallidum:183

H2ZZS9              	100.00%		D3BEI2              	100.00%
Bootstrap support for H2ZZS9 as seed ortholog is 99%.
Bootstrap support for D3BEI2 as seed ortholog is 99%.

Group of orthologs #1166. Best score 231 bits
Score difference with first non-orthologous sequence - L.chalumnae:231 P.pallidum:231

H3AHF8              	100.00%		D3BEI1              	100.00%
Bootstrap support for H3AHF8 as seed ortholog is 100%.
Bootstrap support for D3BEI1 as seed ortholog is 100%.

Group of orthologs #1167. Best score 231 bits
Score difference with first non-orthologous sequence - L.chalumnae:231 P.pallidum:231

H3B4C5              	100.00%		D3BSQ8              	100.00%
Bootstrap support for H3B4C5 as seed ortholog is 100%.
Bootstrap support for D3BSQ8 as seed ortholog is 100%.

Group of orthologs #1168. Best score 230 bits
Score difference with first non-orthologous sequence - L.chalumnae:230 P.pallidum:230

H3BHD7              	100.00%		D3B9G2              	100.00%
H2ZYJ2              	19.20%		
Bootstrap support for H3BHD7 as seed ortholog is 100%.
Bootstrap support for D3B9G2 as seed ortholog is 100%.

Group of orthologs #1169. Best score 230 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.pallidum:157

H3A9Z6              	100.00%		D3BR12              	100.00%
Bootstrap support for H3A9Z6 as seed ortholog is 100%.
Bootstrap support for D3BR12 as seed ortholog is 99%.

Group of orthologs #1170. Best score 230 bits
Score difference with first non-orthologous sequence - L.chalumnae:230 P.pallidum:27

H3AWA1              	100.00%		D3BC73              	100.00%
Bootstrap support for H3AWA1 as seed ortholog is 100%.
Bootstrap support for D3BC73 as seed ortholog is 63%.
Alternative seed ortholog is D3B509 (27 bits away from this cluster)

Group of orthologs #1171. Best score 230 bits
Score difference with first non-orthologous sequence - L.chalumnae:230 P.pallidum:230

H3B6W2              	100.00%		D3BDG0              	100.00%
Bootstrap support for H3B6W2 as seed ortholog is 100%.
Bootstrap support for D3BDG0 as seed ortholog is 100%.

Group of orthologs #1172. Best score 229 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.pallidum:62

H3ALP3              	100.00%		D3BAY1              	100.00%
H3AT07              	59.89%		
Bootstrap support for H3ALP3 as seed ortholog is 99%.
Bootstrap support for D3BAY1 as seed ortholog is 99%.

Group of orthologs #1173. Best score 229 bits
Score difference with first non-orthologous sequence - L.chalumnae:229 P.pallidum:229

H2ZTB8              	100.00%		D3BE66              	100.00%
Bootstrap support for H2ZTB8 as seed ortholog is 100%.
Bootstrap support for D3BE66 as seed ortholog is 100%.

Group of orthologs #1174. Best score 229 bits
Score difference with first non-orthologous sequence - L.chalumnae:229 P.pallidum:229

H3ARB5              	100.00%		D3BP76              	100.00%
Bootstrap support for H3ARB5 as seed ortholog is 100%.
Bootstrap support for D3BP76 as seed ortholog is 100%.

Group of orthologs #1175. Best score 229 bits
Score difference with first non-orthologous sequence - L.chalumnae:229 P.pallidum:229

H3BI49              	100.00%		D3BSJ2              	100.00%
Bootstrap support for H3BI49 as seed ortholog is 100%.
Bootstrap support for D3BSJ2 as seed ortholog is 100%.

Group of orthologs #1176. Best score 228 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 P.pallidum:118

H3A1N6              	100.00%		D3BAL9              	100.00%
H3B4S3              	79.74%		
H3B8H0              	24.18%		
Bootstrap support for H3A1N6 as seed ortholog is 100%.
Bootstrap support for D3BAL9 as seed ortholog is 100%.

Group of orthologs #1177. Best score 228 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 P.pallidum:228

H3AD99              	100.00%		D3BJR7              	100.00%
H3BHG8              	21.62%		
H3B7P4              	19.42%		
Bootstrap support for H3AD99 as seed ortholog is 82%.
Bootstrap support for D3BJR7 as seed ortholog is 100%.

Group of orthologs #1178. Best score 228 bits
Score difference with first non-orthologous sequence - L.chalumnae:228 P.pallidum:228

H3BHW4              	100.00%		D3AXB8              	100.00%
H3A0A8              	78.76%		
Bootstrap support for H3BHW4 as seed ortholog is 100%.
Bootstrap support for D3AXB8 as seed ortholog is 100%.

Group of orthologs #1179. Best score 228 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 P.pallidum:131

H3BHL9              	100.00%		D3B7P1              	100.00%
                    	       		D3BSF4              	31.13%
Bootstrap support for H3BHL9 as seed ortholog is 100%.
Bootstrap support for D3B7P1 as seed ortholog is 100%.

Group of orthologs #1180. Best score 228 bits
Score difference with first non-orthologous sequence - L.chalumnae:228 P.pallidum:228

H3AK09              	100.00%		D3B7P9              	100.00%
Bootstrap support for H3AK09 as seed ortholog is 100%.
Bootstrap support for D3B7P9 as seed ortholog is 100%.

Group of orthologs #1181. Best score 228 bits
Score difference with first non-orthologous sequence - L.chalumnae:228 P.pallidum:228

H3A7C3              	100.00%		D3BIF0              	100.00%
Bootstrap support for H3A7C3 as seed ortholog is 100%.
Bootstrap support for D3BIF0 as seed ortholog is 100%.

Group of orthologs #1182. Best score 228 bits
Score difference with first non-orthologous sequence - L.chalumnae:228 P.pallidum:228

H3A5X8              	100.00%		D3BS88              	100.00%
Bootstrap support for H3A5X8 as seed ortholog is 100%.
Bootstrap support for D3BS88 as seed ortholog is 100%.

Group of orthologs #1183. Best score 228 bits
Score difference with first non-orthologous sequence - L.chalumnae:228 P.pallidum:228

H3AD61              	100.00%		D3BT29              	100.00%
Bootstrap support for H3AD61 as seed ortholog is 100%.
Bootstrap support for D3BT29 as seed ortholog is 100%.

Group of orthologs #1184. Best score 228 bits
Score difference with first non-orthologous sequence - L.chalumnae:228 P.pallidum:228

H3AXD8              	100.00%		D3BVF6              	100.00%
Bootstrap support for H3AXD8 as seed ortholog is 100%.
Bootstrap support for D3BVF6 as seed ortholog is 100%.

Group of orthologs #1185. Best score 227 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 P.pallidum:227

H3ANP6              	100.00%		D3BCD0              	100.00%
H3AQG7              	43.50%		
H3BHD9              	25.25%		
Bootstrap support for H3ANP6 as seed ortholog is 95%.
Bootstrap support for D3BCD0 as seed ortholog is 100%.

Group of orthologs #1186. Best score 227 bits
Score difference with first non-orthologous sequence - L.chalumnae:227 P.pallidum:227

H3B655              	100.00%		D3B6Y3              	100.00%
H3AS63              	33.33%		
Bootstrap support for H3B655 as seed ortholog is 100%.
Bootstrap support for D3B6Y3 as seed ortholog is 100%.

Group of orthologs #1187. Best score 227 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.pallidum:227

H3AFC9              	100.00%		D3AX75              	100.00%
Bootstrap support for H3AFC9 as seed ortholog is 99%.
Bootstrap support for D3AX75 as seed ortholog is 100%.

Group of orthologs #1188. Best score 227 bits
Score difference with first non-orthologous sequence - L.chalumnae:227 P.pallidum:227

H3BA89              	100.00%		D3B267              	100.00%
Bootstrap support for H3BA89 as seed ortholog is 100%.
Bootstrap support for D3B267 as seed ortholog is 100%.

Group of orthologs #1189. Best score 227 bits
Score difference with first non-orthologous sequence - L.chalumnae:227 P.pallidum:227

H3BHK5              	100.00%		D3B2U7              	100.00%
Bootstrap support for H3BHK5 as seed ortholog is 100%.
Bootstrap support for D3B2U7 as seed ortholog is 100%.

Group of orthologs #1190. Best score 226 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 P.pallidum:226

H3AUE0              	100.00%		D3BR16              	100.00%
H3BBE2              	50.38%		
Bootstrap support for H3AUE0 as seed ortholog is 99%.
Bootstrap support for D3BR16 as seed ortholog is 100%.

Group of orthologs #1191. Best score 226 bits
Score difference with first non-orthologous sequence - L.chalumnae:226 P.pallidum:226

H3B4M6              	100.00%		D3BT91              	100.00%
H3A064              	53.21%		
Bootstrap support for H3B4M6 as seed ortholog is 100%.
Bootstrap support for D3BT91 as seed ortholog is 100%.

Group of orthologs #1192. Best score 226 bits
Score difference with first non-orthologous sequence - L.chalumnae:226 P.pallidum:226

H3ADE0              	100.00%		D3AY99              	100.00%
Bootstrap support for H3ADE0 as seed ortholog is 100%.
Bootstrap support for D3AY99 as seed ortholog is 100%.

Group of orthologs #1193. Best score 226 bits
Score difference with first non-orthologous sequence - L.chalumnae:173 P.pallidum:226

H3AGA7              	100.00%		D3BB06              	100.00%
Bootstrap support for H3AGA7 as seed ortholog is 100%.
Bootstrap support for D3BB06 as seed ortholog is 100%.

Group of orthologs #1194. Best score 226 bits
Score difference with first non-orthologous sequence - L.chalumnae:122 P.pallidum:89

H3B8I4              	100.00%		D3AXP3              	100.00%
Bootstrap support for H3B8I4 as seed ortholog is 99%.
Bootstrap support for D3AXP3 as seed ortholog is 97%.

Group of orthologs #1195. Best score 226 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.pallidum:226

H3B8Y2              	100.00%		D3B615              	100.00%
Bootstrap support for H3B8Y2 as seed ortholog is 99%.
Bootstrap support for D3B615 as seed ortholog is 100%.

Group of orthologs #1196. Best score 226 bits
Score difference with first non-orthologous sequence - L.chalumnae:226 P.pallidum:226

H3B675              	100.00%		D3BCE5              	100.00%
Bootstrap support for H3B675 as seed ortholog is 100%.
Bootstrap support for D3BCE5 as seed ortholog is 100%.

Group of orthologs #1197. Best score 226 bits
Score difference with first non-orthologous sequence - L.chalumnae:226 P.pallidum:226

M3XK96              	100.00%		D3BEF3              	100.00%
Bootstrap support for M3XK96 as seed ortholog is 100%.
Bootstrap support for D3BEF3 as seed ortholog is 100%.

Group of orthologs #1198. Best score 225 bits
Score difference with first non-orthologous sequence - L.chalumnae:225 P.pallidum:68

H3ACP4              	100.00%		D3B0A6              	100.00%
H3ANU1              	18.57%		
Bootstrap support for H3ACP4 as seed ortholog is 100%.
Bootstrap support for D3B0A6 as seed ortholog is 93%.

Group of orthologs #1199. Best score 225 bits
Score difference with first non-orthologous sequence - L.chalumnae:225 P.pallidum:225

H3A3R4              	100.00%		D3BEY3              	100.00%
H2ZXQ7              	30.66%		
Bootstrap support for H3A3R4 as seed ortholog is 100%.
Bootstrap support for D3BEY3 as seed ortholog is 100%.

Group of orthologs #1200. Best score 225 bits
Score difference with first non-orthologous sequence - L.chalumnae:171 P.pallidum:225

H3A723              	100.00%		D3BRL5              	100.00%
H3A0R8              	42.90%		
Bootstrap support for H3A723 as seed ortholog is 100%.
Bootstrap support for D3BRL5 as seed ortholog is 100%.

Group of orthologs #1201. Best score 225 bits
Score difference with first non-orthologous sequence - L.chalumnae:225 P.pallidum:225

H3AXU6              	100.00%		D3BG97              	100.00%
H3AFM2              	42.63%		
Bootstrap support for H3AXU6 as seed ortholog is 100%.
Bootstrap support for D3BG97 as seed ortholog is 100%.

Group of orthologs #1202. Best score 225 bits
Score difference with first non-orthologous sequence - L.chalumnae:225 P.pallidum:225

H3BFP2              	100.00%		D3BM67              	100.00%
H3ANF9              	33.82%		
Bootstrap support for H3BFP2 as seed ortholog is 100%.
Bootstrap support for D3BM67 as seed ortholog is 100%.

Group of orthologs #1203. Best score 225 bits
Score difference with first non-orthologous sequence - L.chalumnae:225 P.pallidum:225

H3B3U1              	100.00%		D3BBQ8              	100.00%
Bootstrap support for H3B3U1 as seed ortholog is 100%.
Bootstrap support for D3BBQ8 as seed ortholog is 100%.

Group of orthologs #1204. Best score 225 bits
Score difference with first non-orthologous sequence - L.chalumnae:225 P.pallidum:225

H3BGA2              	100.00%		D3B5F4              	100.00%
Bootstrap support for H3BGA2 as seed ortholog is 100%.
Bootstrap support for D3B5F4 as seed ortholog is 100%.

Group of orthologs #1205. Best score 225 bits
Score difference with first non-orthologous sequence - L.chalumnae:225 P.pallidum:225

H3BBY4              	100.00%		D3BT90              	100.00%
Bootstrap support for H3BBY4 as seed ortholog is 100%.
Bootstrap support for D3BT90 as seed ortholog is 100%.

Group of orthologs #1206. Best score 224 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 P.pallidum:58

H3AV19              	100.00%		D3AVR4              	100.00%
H3AVR3              	49.00%		
H3B5X6              	28.23%		
Bootstrap support for H3AV19 as seed ortholog is 99%.
Bootstrap support for D3AVR4 as seed ortholog is 91%.

Group of orthologs #1207. Best score 224 bits
Score difference with first non-orthologous sequence - L.chalumnae:224 P.pallidum:224

H3ALC4              	100.00%		D3AZI0              	100.00%
Bootstrap support for H3ALC4 as seed ortholog is 100%.
Bootstrap support for D3AZI0 as seed ortholog is 100%.

Group of orthologs #1208. Best score 224 bits
Score difference with first non-orthologous sequence - L.chalumnae:224 P.pallidum:224

H3ADK8              	100.00%		D3BL61              	100.00%
Bootstrap support for H3ADK8 as seed ortholog is 100%.
Bootstrap support for D3BL61 as seed ortholog is 100%.

Group of orthologs #1209. Best score 224 bits
Score difference with first non-orthologous sequence - L.chalumnae:224 P.pallidum:224

H3ARC2              	100.00%		D3BPY5              	100.00%
Bootstrap support for H3ARC2 as seed ortholog is 100%.
Bootstrap support for D3BPY5 as seed ortholog is 100%.

Group of orthologs #1210. Best score 224 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 P.pallidum:224

H3BCM6              	100.00%		D3BCE7              	100.00%
Bootstrap support for H3BCM6 as seed ortholog is 99%.
Bootstrap support for D3BCE7 as seed ortholog is 100%.

Group of orthologs #1211. Best score 224 bits
Score difference with first non-orthologous sequence - L.chalumnae:39 P.pallidum:133

H3BBP3              	100.00%		D3BEA8              	100.00%
Bootstrap support for H3BBP3 as seed ortholog is 92%.
Bootstrap support for D3BEA8 as seed ortholog is 99%.

Group of orthologs #1212. Best score 223 bits
Score difference with first non-orthologous sequence - L.chalumnae:160 P.pallidum:223

H3BC80              	100.00%		D3B167              	100.00%
H3BBW0              	42.82%		
H3BCI1              	38.73%		
M3XHK1              	24.78%		
H3AWY7              	23.55%		
Bootstrap support for H3BC80 as seed ortholog is 99%.
Bootstrap support for D3B167 as seed ortholog is 100%.

Group of orthologs #1213. Best score 223 bits
Score difference with first non-orthologous sequence - L.chalumnae:223 P.pallidum:223

H3BB35              	100.00%		D3BLM9              	100.00%
H3A3H6              	54.51%		
H3B2J2              	49.30%		
H3B4A7              	13.80%		
H3B7M7              	6.76%		
Bootstrap support for H3BB35 as seed ortholog is 100%.
Bootstrap support for D3BLM9 as seed ortholog is 100%.

Group of orthologs #1214. Best score 223 bits
Score difference with first non-orthologous sequence - L.chalumnae:223 P.pallidum:223

H3A1U3              	100.00%		D3B2D5              	100.00%
                    	       		D3BMK7              	100.00%
Bootstrap support for H3A1U3 as seed ortholog is 100%.
Bootstrap support for D3B2D5 as seed ortholog is 100%.
Bootstrap support for D3BMK7 as seed ortholog is 100%.

Group of orthologs #1215. Best score 223 bits
Score difference with first non-orthologous sequence - L.chalumnae:223 P.pallidum:223

H3AXX6              	100.00%		D3AXW5              	100.00%
H3AAZ7              	17.60%		
Bootstrap support for H3AXX6 as seed ortholog is 100%.
Bootstrap support for D3AXW5 as seed ortholog is 100%.

Group of orthologs #1216. Best score 223 bits
Score difference with first non-orthologous sequence - L.chalumnae:143 P.pallidum:155

H3AE65              	100.00%		D3BVF8              	100.00%
H3B461              	56.56%		
Bootstrap support for H3AE65 as seed ortholog is 99%.
Bootstrap support for D3BVF8 as seed ortholog is 100%.

Group of orthologs #1217. Best score 223 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 P.pallidum:223

H3AKU5              	100.00%		D3B9G4              	100.00%
Bootstrap support for H3AKU5 as seed ortholog is 99%.
Bootstrap support for D3B9G4 as seed ortholog is 100%.

Group of orthologs #1218. Best score 223 bits
Score difference with first non-orthologous sequence - L.chalumnae:223 P.pallidum:139

H3AN88              	100.00%		D3BKR2              	100.00%
Bootstrap support for H3AN88 as seed ortholog is 100%.
Bootstrap support for D3BKR2 as seed ortholog is 99%.

Group of orthologs #1219. Best score 223 bits
Score difference with first non-orthologous sequence - L.chalumnae:223 P.pallidum:223

H3BGV2              	100.00%		D3B6U0              	100.00%
Bootstrap support for H3BGV2 as seed ortholog is 100%.
Bootstrap support for D3B6U0 as seed ortholog is 100%.

Group of orthologs #1220. Best score 222 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 P.pallidum:222

H2ZZD6              	100.00%		D3AX20              	100.00%
H3AE34              	33.97%		
H2ZXS9              	23.34%		
Bootstrap support for H2ZZD6 as seed ortholog is 94%.
Bootstrap support for D3AX20 as seed ortholog is 100%.

Group of orthologs #1221. Best score 222 bits
Score difference with first non-orthologous sequence - L.chalumnae:38 P.pallidum:222

H3A318              	100.00%		D3B266              	100.00%
M3XJS5              	33.28%		
Bootstrap support for H3A318 as seed ortholog is 72%.
Alternative seed ortholog is H3AFU9 (38 bits away from this cluster)
Bootstrap support for D3B266 as seed ortholog is 100%.

Group of orthologs #1222. Best score 222 bits
Score difference with first non-orthologous sequence - L.chalumnae:46 P.pallidum:7

H3A4Q6              	100.00%		D3BUT3              	100.00%
H3B1Y8              	83.72%		
Bootstrap support for H3A4Q6 as seed ortholog is 99%.
Bootstrap support for D3BUT3 as seed ortholog is 64%.
Alternative seed ortholog is D3B633 (7 bits away from this cluster)

Group of orthologs #1223. Best score 222 bits
Score difference with first non-orthologous sequence - L.chalumnae:155 P.pallidum:160

H2ZS27              	100.00%		D3AZH2              	100.00%
Bootstrap support for H2ZS27 as seed ortholog is 99%.
Bootstrap support for D3AZH2 as seed ortholog is 99%.

Group of orthologs #1224. Best score 222 bits
Score difference with first non-orthologous sequence - L.chalumnae:222 P.pallidum:222

H3A081              	100.00%		D3BVI2              	100.00%
Bootstrap support for H3A081 as seed ortholog is 100%.
Bootstrap support for D3BVI2 as seed ortholog is 100%.

Group of orthologs #1225. Best score 222 bits
Score difference with first non-orthologous sequence - L.chalumnae:222 P.pallidum:222

H3AMH8              	100.00%		D3BIL7              	100.00%
Bootstrap support for H3AMH8 as seed ortholog is 100%.
Bootstrap support for D3BIL7 as seed ortholog is 100%.

Group of orthologs #1226. Best score 221 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.pallidum:221

H3AK37              	100.00%		D3BLR6              	100.00%
H3B8X6              	54.98%		
Bootstrap support for H3AK37 as seed ortholog is 85%.
Bootstrap support for D3BLR6 as seed ortholog is 100%.

Group of orthologs #1227. Best score 221 bits
Score difference with first non-orthologous sequence - L.chalumnae:221 P.pallidum:221

H3AC07              	100.00%		D3B3Q6              	100.00%
Bootstrap support for H3AC07 as seed ortholog is 100%.
Bootstrap support for D3B3Q6 as seed ortholog is 100%.

Group of orthologs #1228. Best score 221 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 P.pallidum:221

H3A1I3              	100.00%		D3BGU1              	100.00%
Bootstrap support for H3A1I3 as seed ortholog is 99%.
Bootstrap support for D3BGU1 as seed ortholog is 100%.

Group of orthologs #1229. Best score 221 bits
Score difference with first non-orthologous sequence - L.chalumnae:221 P.pallidum:221

H2ZWR9              	100.00%		D3BU82              	100.00%
Bootstrap support for H2ZWR9 as seed ortholog is 100%.
Bootstrap support for D3BU82 as seed ortholog is 100%.

Group of orthologs #1230. Best score 221 bits
Score difference with first non-orthologous sequence - L.chalumnae:221 P.pallidum:221

H3AC17              	100.00%		D3BK61              	100.00%
Bootstrap support for H3AC17 as seed ortholog is 100%.
Bootstrap support for D3BK61 as seed ortholog is 100%.

Group of orthologs #1231. Best score 221 bits
Score difference with first non-orthologous sequence - L.chalumnae:221 P.pallidum:221

H3AGY0              	100.00%		D3BLC2              	100.00%
Bootstrap support for H3AGY0 as seed ortholog is 100%.
Bootstrap support for D3BLC2 as seed ortholog is 100%.

Group of orthologs #1232. Best score 221 bits
Score difference with first non-orthologous sequence - L.chalumnae:221 P.pallidum:221

H3ANL4              	100.00%		D3BQ00              	100.00%
Bootstrap support for H3ANL4 as seed ortholog is 100%.
Bootstrap support for D3BQ00 as seed ortholog is 100%.

Group of orthologs #1233. Best score 221 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.pallidum:221

H3B3H8              	100.00%		D3BU31              	100.00%
Bootstrap support for H3B3H8 as seed ortholog is 100%.
Bootstrap support for D3BU31 as seed ortholog is 100%.

Group of orthologs #1234. Best score 220 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 P.pallidum:100

H3A858              	100.00%		D3B850              	100.00%
H3AGI3              	90.60%		D3AXD1              	8.94%
Bootstrap support for H3A858 as seed ortholog is 100%.
Bootstrap support for D3B850 as seed ortholog is 99%.

Group of orthologs #1235. Best score 220 bits
Score difference with first non-orthologous sequence - L.chalumnae:116 P.pallidum:220

M3XHB8              	100.00%		D3BNW3              	100.00%
H3A9J3              	50.08%		
H3AJ41              	39.69%		
Bootstrap support for M3XHB8 as seed ortholog is 98%.
Bootstrap support for D3BNW3 as seed ortholog is 100%.

Group of orthologs #1236. Best score 220 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.pallidum:87

H3A6E2              	100.00%		D3BE74              	100.00%
Bootstrap support for H3A6E2 as seed ortholog is 91%.
Bootstrap support for D3BE74 as seed ortholog is 97%.

Group of orthologs #1237. Best score 220 bits
Score difference with first non-orthologous sequence - L.chalumnae:220 P.pallidum:220

H2ZV22              	100.00%		D3BQ33              	100.00%
Bootstrap support for H2ZV22 as seed ortholog is 100%.
Bootstrap support for D3BQ33 as seed ortholog is 100%.

Group of orthologs #1238. Best score 220 bits
Score difference with first non-orthologous sequence - L.chalumnae:220 P.pallidum:84

H3AND0              	100.00%		D3BIL4              	100.00%
Bootstrap support for H3AND0 as seed ortholog is 100%.
Bootstrap support for D3BIL4 as seed ortholog is 99%.

Group of orthologs #1239. Best score 220 bits
Score difference with first non-orthologous sequence - L.chalumnae:220 P.pallidum:220

H3ALY0              	100.00%		D3BLZ9              	100.00%
Bootstrap support for H3ALY0 as seed ortholog is 100%.
Bootstrap support for D3BLZ9 as seed ortholog is 100%.

Group of orthologs #1240. Best score 220 bits
Score difference with first non-orthologous sequence - L.chalumnae:220 P.pallidum:220

H3AP90              	100.00%		D3BSR4              	100.00%
Bootstrap support for H3AP90 as seed ortholog is 100%.
Bootstrap support for D3BSR4 as seed ortholog is 100%.

Group of orthologs #1241. Best score 219 bits
Score difference with first non-orthologous sequence - L.chalumnae:219 P.pallidum:219

H2ZZQ1              	100.00%		D3BMN9              	100.00%
Bootstrap support for H2ZZQ1 as seed ortholog is 100%.
Bootstrap support for D3BMN9 as seed ortholog is 100%.

Group of orthologs #1242. Best score 218 bits
Score difference with first non-orthologous sequence - L.chalumnae:73 P.pallidum:114

H2ZYB2              	100.00%		D3B6N1              	100.00%
H3A2B9              	15.21%		
H3ACU3              	6.48%		
Bootstrap support for H2ZYB2 as seed ortholog is 98%.
Bootstrap support for D3B6N1 as seed ortholog is 99%.

Group of orthologs #1243. Best score 218 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 P.pallidum:76

H3AQP0              	100.00%		D3BFF7              	100.00%
H2ZY29              	31.46%		
H2ZW04              	18.74%		
Bootstrap support for H3AQP0 as seed ortholog is 99%.
Bootstrap support for D3BFF7 as seed ortholog is 96%.

Group of orthologs #1244. Best score 218 bits
Score difference with first non-orthologous sequence - L.chalumnae:218 P.pallidum:111

H3B3J5              	100.00%		D3BC04              	100.00%
H3AG02              	47.79%		
H3B3M4              	34.26%		
Bootstrap support for H3B3J5 as seed ortholog is 100%.
Bootstrap support for D3BC04 as seed ortholog is 98%.

Group of orthologs #1245. Best score 218 bits
Score difference with first non-orthologous sequence - L.chalumnae:218 P.pallidum:218

H3AJ29              	100.00%		D3BCK9              	100.00%
H3BC78              	66.14%		
Bootstrap support for H3AJ29 as seed ortholog is 100%.
Bootstrap support for D3BCK9 as seed ortholog is 100%.

Group of orthologs #1246. Best score 218 bits
Score difference with first non-orthologous sequence - L.chalumnae:218 P.pallidum:218

H3A7Z4              	100.00%		D3BM88              	100.00%
H3BIE1              	46.52%		
Bootstrap support for H3A7Z4 as seed ortholog is 100%.
Bootstrap support for D3BM88 as seed ortholog is 100%.

Group of orthologs #1247. Best score 218 bits
Score difference with first non-orthologous sequence - L.chalumnae:218 P.pallidum:82

H3BGZ8              	100.00%		D3BRD6              	100.00%
H3B8J2              	29.09%		
Bootstrap support for H3BGZ8 as seed ortholog is 100%.
Bootstrap support for D3BRD6 as seed ortholog is 99%.

Group of orthologs #1248. Best score 218 bits
Score difference with first non-orthologous sequence - L.chalumnae:218 P.pallidum:218

H3AEV9              	100.00%		D3BG94              	100.00%
Bootstrap support for H3AEV9 as seed ortholog is 100%.
Bootstrap support for D3BG94 as seed ortholog is 100%.

Group of orthologs #1249. Best score 218 bits
Score difference with first non-orthologous sequence - L.chalumnae:147 P.pallidum:79

H3B890              	100.00%		D3BFU9              	100.00%
Bootstrap support for H3B890 as seed ortholog is 100%.
Bootstrap support for D3BFU9 as seed ortholog is 99%.

Group of orthologs #1250. Best score 218 bits
Score difference with first non-orthologous sequence - L.chalumnae:218 P.pallidum:218

H3BFI6              	100.00%		D3BAX9              	100.00%
Bootstrap support for H3BFI6 as seed ortholog is 100%.
Bootstrap support for D3BAX9 as seed ortholog is 100%.

Group of orthologs #1251. Best score 218 bits
Score difference with first non-orthologous sequence - L.chalumnae:218 P.pallidum:218

H3BEQ5              	100.00%		D3BG35              	100.00%
Bootstrap support for H3BEQ5 as seed ortholog is 100%.
Bootstrap support for D3BG35 as seed ortholog is 100%.

Group of orthologs #1252. Best score 218 bits
Score difference with first non-orthologous sequence - L.chalumnae:218 P.pallidum:218

H3BH11              	100.00%		D3BJ01              	100.00%
Bootstrap support for H3BH11 as seed ortholog is 100%.
Bootstrap support for D3BJ01 as seed ortholog is 100%.

Group of orthologs #1253. Best score 217 bits
Score difference with first non-orthologous sequence - L.chalumnae:217 P.pallidum:217

H3B9E6              	100.00%		D3B5S7              	100.00%
H3B0Y1              	48.18%		
H3B2Q7              	42.34%		
H3B529              	11.44%		
M3XH99              	9.73%		
H3A3N1              	7.22%		
H3AUT3              	5.60%		
Bootstrap support for H3B9E6 as seed ortholog is 100%.
Bootstrap support for D3B5S7 as seed ortholog is 100%.

Group of orthologs #1254. Best score 217 bits
Score difference with first non-orthologous sequence - L.chalumnae:217 P.pallidum:217

H3A9F9              	100.00%		D3B0W5              	100.00%
Bootstrap support for H3A9F9 as seed ortholog is 100%.
Bootstrap support for D3B0W5 as seed ortholog is 100%.

Group of orthologs #1255. Best score 217 bits
Score difference with first non-orthologous sequence - L.chalumnae:217 P.pallidum:217

H3ARU3              	100.00%		D3B381              	100.00%
Bootstrap support for H3ARU3 as seed ortholog is 100%.
Bootstrap support for D3B381 as seed ortholog is 100%.

Group of orthologs #1256. Best score 217 bits
Score difference with first non-orthologous sequence - L.chalumnae:217 P.pallidum:217

H3BBF6              	100.00%		D3AZG0              	100.00%
Bootstrap support for H3BBF6 as seed ortholog is 100%.
Bootstrap support for D3AZG0 as seed ortholog is 100%.

Group of orthologs #1257. Best score 217 bits
Score difference with first non-orthologous sequence - L.chalumnae:217 P.pallidum:25

H3AWZ9              	100.00%		D3BBM2              	100.00%
Bootstrap support for H3AWZ9 as seed ortholog is 100%.
Bootstrap support for D3BBM2 as seed ortholog is 73%.
Alternative seed ortholog is D3B8Y2 (25 bits away from this cluster)

Group of orthologs #1258. Best score 217 bits
Score difference with first non-orthologous sequence - L.chalumnae:15 P.pallidum:79

H3AQ80              	100.00%		D3BQ64              	100.00%
Bootstrap support for H3AQ80 as seed ortholog is 54%.
Alternative seed ortholog is H2ZVV7 (15 bits away from this cluster)
Bootstrap support for D3BQ64 as seed ortholog is 93%.

Group of orthologs #1259. Best score 217 bits
Score difference with first non-orthologous sequence - L.chalumnae:217 P.pallidum:217

H3ARJ8              	100.00%		D3BPL5              	100.00%
Bootstrap support for H3ARJ8 as seed ortholog is 100%.
Bootstrap support for D3BPL5 as seed ortholog is 100%.

Group of orthologs #1260. Best score 217 bits
Score difference with first non-orthologous sequence - L.chalumnae:217 P.pallidum:217

H3BGJ0              	100.00%		D3BKG2              	100.00%
Bootstrap support for H3BGJ0 as seed ortholog is 100%.
Bootstrap support for D3BKG2 as seed ortholog is 100%.

Group of orthologs #1261. Best score 216 bits
Score difference with first non-orthologous sequence - L.chalumnae:216 P.pallidum:80

H2ZZY5              	100.00%		D3AZJ0              	100.00%
M3XHE1              	66.09%		
Bootstrap support for H2ZZY5 as seed ortholog is 100%.
Bootstrap support for D3AZJ0 as seed ortholog is 93%.

Group of orthologs #1262. Best score 216 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.pallidum:216

H3ALF6              	100.00%		D3B1Z1              	100.00%
Bootstrap support for H3ALF6 as seed ortholog is 98%.
Bootstrap support for D3B1Z1 as seed ortholog is 100%.

Group of orthologs #1263. Best score 216 bits
Score difference with first non-orthologous sequence - L.chalumnae:216 P.pallidum:110

H3B6D4              	100.00%		D3B5B4              	100.00%
Bootstrap support for H3B6D4 as seed ortholog is 100%.
Bootstrap support for D3B5B4 as seed ortholog is 99%.

Group of orthologs #1264. Best score 215 bits
Score difference with first non-orthologous sequence - L.chalumnae:31 P.pallidum:215

H3APY8              	100.00%		D3B6T5              	100.00%
Bootstrap support for H3APY8 as seed ortholog is 64%.
Alternative seed ortholog is H3ASY3 (31 bits away from this cluster)
Bootstrap support for D3B6T5 as seed ortholog is 100%.

Group of orthologs #1265. Best score 215 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 P.pallidum:128

H3AUV4              	100.00%		D3BAG5              	100.00%
Bootstrap support for H3AUV4 as seed ortholog is 99%.
Bootstrap support for D3BAG5 as seed ortholog is 100%.

Group of orthologs #1266. Best score 215 bits
Score difference with first non-orthologous sequence - L.chalumnae:215 P.pallidum:215

H3BCG2              	100.00%		D3AWH5              	100.00%
Bootstrap support for H3BCG2 as seed ortholog is 100%.
Bootstrap support for D3AWH5 as seed ortholog is 100%.

Group of orthologs #1267. Best score 215 bits
Score difference with first non-orthologous sequence - L.chalumnae:215 P.pallidum:215

H3AQC5              	100.00%		D3BFQ0              	100.00%
Bootstrap support for H3AQC5 as seed ortholog is 100%.
Bootstrap support for D3BFQ0 as seed ortholog is 100%.

Group of orthologs #1268. Best score 215 bits
Score difference with first non-orthologous sequence - L.chalumnae:215 P.pallidum:48

H3BAE2              	100.00%		D3B7B4              	100.00%
Bootstrap support for H3BAE2 as seed ortholog is 100%.
Bootstrap support for D3B7B4 as seed ortholog is 96%.

Group of orthologs #1269. Best score 215 bits
Score difference with first non-orthologous sequence - L.chalumnae:215 P.pallidum:215

H3AZH6              	100.00%		D3BJY8              	100.00%
Bootstrap support for H3AZH6 as seed ortholog is 100%.
Bootstrap support for D3BJY8 as seed ortholog is 100%.

Group of orthologs #1270. Best score 215 bits
Score difference with first non-orthologous sequence - L.chalumnae:215 P.pallidum:215

H3B0X8              	100.00%		D3BQV7              	100.00%
Bootstrap support for H3B0X8 as seed ortholog is 100%.
Bootstrap support for D3BQV7 as seed ortholog is 100%.

Group of orthologs #1271. Best score 215 bits
Score difference with first non-orthologous sequence - L.chalumnae:215 P.pallidum:215

H3B6D3              	100.00%		D3BPW6              	100.00%
Bootstrap support for H3B6D3 as seed ortholog is 100%.
Bootstrap support for D3BPW6 as seed ortholog is 100%.

Group of orthologs #1272. Best score 215 bits
Score difference with first non-orthologous sequence - L.chalumnae:30 P.pallidum:16

M3XHJ3              	100.00%		D3BQK6              	100.00%
Bootstrap support for M3XHJ3 as seed ortholog is 81%.
Bootstrap support for D3BQK6 as seed ortholog is 71%.
Alternative seed ortholog is D3AYG6 (16 bits away from this cluster)

Group of orthologs #1273. Best score 214 bits
Score difference with first non-orthologous sequence - L.chalumnae:214 P.pallidum:214

H3B9Y3              	100.00%		D3B567              	100.00%
H3A7N4              	76.22%		
H3AEC0              	73.41%		
Bootstrap support for H3B9Y3 as seed ortholog is 100%.
Bootstrap support for D3B567 as seed ortholog is 100%.

Group of orthologs #1274. Best score 214 bits
Score difference with first non-orthologous sequence - L.chalumnae:214 P.pallidum:214

H3BDA7              	100.00%		D3BJV1              	100.00%
H3ABU5              	12.28%		
Bootstrap support for H3BDA7 as seed ortholog is 100%.
Bootstrap support for D3BJV1 as seed ortholog is 100%.

Group of orthologs #1275. Best score 214 bits
Score difference with first non-orthologous sequence - L.chalumnae:214 P.pallidum:214

H3B2N8              	100.00%		D3AWB0              	100.00%
Bootstrap support for H3B2N8 as seed ortholog is 100%.
Bootstrap support for D3AWB0 as seed ortholog is 100%.

Group of orthologs #1276. Best score 214 bits
Score difference with first non-orthologous sequence - L.chalumnae:214 P.pallidum:214

H3AEZ0              	100.00%		D3BN12              	100.00%
Bootstrap support for H3AEZ0 as seed ortholog is 100%.
Bootstrap support for D3BN12 as seed ortholog is 100%.

Group of orthologs #1277. Best score 214 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 P.pallidum:214

H3AV21              	100.00%		D3BGD2              	100.00%
Bootstrap support for H3AV21 as seed ortholog is 79%.
Bootstrap support for D3BGD2 as seed ortholog is 100%.

Group of orthologs #1278. Best score 214 bits
Score difference with first non-orthologous sequence - L.chalumnae:214 P.pallidum:127

H3ASI1              	100.00%		D3BSS7              	100.00%
Bootstrap support for H3ASI1 as seed ortholog is 100%.
Bootstrap support for D3BSS7 as seed ortholog is 99%.

Group of orthologs #1279. Best score 214 bits
Score difference with first non-orthologous sequence - L.chalumnae:214 P.pallidum:214

H3B9E2              	100.00%		D3BGD8              	100.00%
Bootstrap support for H3B9E2 as seed ortholog is 100%.
Bootstrap support for D3BGD8 as seed ortholog is 100%.

Group of orthologs #1280. Best score 213 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 P.pallidum:84

H3AJ74              	100.00%		D3B3P3              	100.00%
H2ZXJ7              	24.34%		
H3B270              	23.11%		
H3BEA6              	22.09%		
H3A5P5              	16.77%		
H3AXM0              	7.77%		
Bootstrap support for H3AJ74 as seed ortholog is 90%.
Bootstrap support for D3B3P3 as seed ortholog is 99%.

Group of orthologs #1281. Best score 213 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 P.pallidum:87

H3ASI0              	100.00%		D3B436              	100.00%
H2ZUW2              	52.50%		
H3AY19              	47.00%		
Bootstrap support for H3ASI0 as seed ortholog is 99%.
Bootstrap support for D3B436 as seed ortholog is 99%.

Group of orthologs #1282. Best score 213 bits
Score difference with first non-orthologous sequence - L.chalumnae:213 P.pallidum:139

H3AFC4              	100.00%		D3BQD0              	100.00%
H3BE43              	34.30%		
Bootstrap support for H3AFC4 as seed ortholog is 100%.
Bootstrap support for D3BQD0 as seed ortholog is 100%.

Group of orthologs #1283. Best score 213 bits
Score difference with first non-orthologous sequence - L.chalumnae:213 P.pallidum:213

H3A535              	100.00%		D3AZG4              	100.00%
Bootstrap support for H3A535 as seed ortholog is 100%.
Bootstrap support for D3AZG4 as seed ortholog is 100%.

Group of orthologs #1284. Best score 213 bits
Score difference with first non-orthologous sequence - L.chalumnae:213 P.pallidum:213

H3AND2              	100.00%		D3BNY6              	100.00%
Bootstrap support for H3AND2 as seed ortholog is 100%.
Bootstrap support for D3BNY6 as seed ortholog is 100%.

Group of orthologs #1285. Best score 212 bits
Score difference with first non-orthologous sequence - L.chalumnae:25 P.pallidum:49

H3A9I2              	100.00%		D3BQG0              	100.00%
H3AQY1              	71.15%		D3BAN4              	18.08%
H3AMU1              	63.02%		D3B5Y7              	12.55%
H3A409              	48.92%		
Bootstrap support for H3A9I2 as seed ortholog is 67%.
Alternative seed ortholog is H3BI88 (25 bits away from this cluster)
Bootstrap support for D3BQG0 as seed ortholog is 81%.

Group of orthologs #1286. Best score 212 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 P.pallidum:71

M3XIN1              	100.00%		D3BJA5              	100.00%
H3AIF7              	78.19%		
H3BDQ8              	50.35%		
H3B9P5              	39.54%		
Bootstrap support for M3XIN1 as seed ortholog is 99%.
Bootstrap support for D3BJA5 as seed ortholog is 98%.

Group of orthologs #1287. Best score 212 bits
Score difference with first non-orthologous sequence - L.chalumnae:212 P.pallidum:212

H3AZB6              	100.00%		D3AX96              	100.00%
H3AS47              	8.72%		
Bootstrap support for H3AZB6 as seed ortholog is 100%.
Bootstrap support for D3AX96 as seed ortholog is 100%.

Group of orthologs #1288. Best score 212 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.pallidum:149

H3AAF0              	100.00%		D3BKH8              	100.00%
Bootstrap support for H3AAF0 as seed ortholog is 99%.
Bootstrap support for D3BKH8 as seed ortholog is 99%.

Group of orthologs #1289. Best score 212 bits
Score difference with first non-orthologous sequence - L.chalumnae:22 P.pallidum:212

H3BCK6              	100.00%		D3B9K1              	100.00%
Bootstrap support for H3BCK6 as seed ortholog is 88%.
Bootstrap support for D3B9K1 as seed ortholog is 100%.

Group of orthologs #1290. Best score 212 bits
Score difference with first non-orthologous sequence - L.chalumnae:212 P.pallidum:212

H3B819              	100.00%		D3BUX6              	100.00%
Bootstrap support for H3B819 as seed ortholog is 100%.
Bootstrap support for D3BUX6 as seed ortholog is 100%.

Group of orthologs #1291. Best score 211 bits
Score difference with first non-orthologous sequence - L.chalumnae:211 P.pallidum:211

H3AI49              	100.00%		D3B2U9              	100.00%
Bootstrap support for H3AI49 as seed ortholog is 100%.
Bootstrap support for D3B2U9 as seed ortholog is 100%.

Group of orthologs #1292. Best score 211 bits
Score difference with first non-orthologous sequence - L.chalumnae:211 P.pallidum:211

H3AM62              	100.00%		D3B1L2              	100.00%
Bootstrap support for H3AM62 as seed ortholog is 100%.
Bootstrap support for D3B1L2 as seed ortholog is 100%.

Group of orthologs #1293. Best score 211 bits
Score difference with first non-orthologous sequence - L.chalumnae:211 P.pallidum:211

H3ACZ5              	100.00%		D3BCN8              	100.00%
Bootstrap support for H3ACZ5 as seed ortholog is 100%.
Bootstrap support for D3BCN8 as seed ortholog is 100%.

Group of orthologs #1294. Best score 211 bits
Score difference with first non-orthologous sequence - L.chalumnae:142 P.pallidum:211

H3AL25              	100.00%		D3B763              	100.00%
Bootstrap support for H3AL25 as seed ortholog is 99%.
Bootstrap support for D3B763 as seed ortholog is 100%.

Group of orthologs #1295. Best score 210 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.pallidum:210

H3B6N0              	100.00%		D3BEY6              	100.00%
H3A9E2              	18.84%		
H3AS57              	6.71%		
Bootstrap support for H3B6N0 as seed ortholog is 96%.
Bootstrap support for D3BEY6 as seed ortholog is 100%.

Group of orthologs #1296. Best score 210 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 P.pallidum:210

H3APW7              	100.00%		D3BB44              	100.00%
H2ZRM6              	19.83%		
Bootstrap support for H3APW7 as seed ortholog is 99%.
Bootstrap support for D3BB44 as seed ortholog is 100%.

Group of orthologs #1297. Best score 210 bits
Score difference with first non-orthologous sequence - L.chalumnae:210 P.pallidum:210

H3BGM9              	100.00%		D3B5I1              	100.00%
Bootstrap support for H3BGM9 as seed ortholog is 100%.
Bootstrap support for D3B5I1 as seed ortholog is 100%.

Group of orthologs #1298. Best score 209 bits
Score difference with first non-orthologous sequence - L.chalumnae:209 P.pallidum:209

H3B5Z9              	100.00%		D3B253              	100.00%
Bootstrap support for H3B5Z9 as seed ortholog is 100%.
Bootstrap support for D3B253 as seed ortholog is 100%.

Group of orthologs #1299. Best score 209 bits
Score difference with first non-orthologous sequence - L.chalumnae:209 P.pallidum:209

H3AXW3              	100.00%		D3BMJ9              	100.00%
Bootstrap support for H3AXW3 as seed ortholog is 100%.
Bootstrap support for D3BMJ9 as seed ortholog is 100%.

Group of orthologs #1300. Best score 209 bits
Score difference with first non-orthologous sequence - L.chalumnae:209 P.pallidum:209

H3B857              	100.00%		D3BHK8              	100.00%
Bootstrap support for H3B857 as seed ortholog is 100%.
Bootstrap support for D3BHK8 as seed ortholog is 100%.

Group of orthologs #1301. Best score 208 bits
Score difference with first non-orthologous sequence - L.chalumnae:208 P.pallidum:208

H2ZY95              	100.00%		D3B312              	100.00%
H2ZZ77              	61.76%		
Bootstrap support for H2ZY95 as seed ortholog is 100%.
Bootstrap support for D3B312 as seed ortholog is 100%.

Group of orthologs #1302. Best score 208 bits
Score difference with first non-orthologous sequence - L.chalumnae:208 P.pallidum:208

H3ATW0              	100.00%		D3AYJ4              	100.00%
H3AVZ8              	20.97%		
Bootstrap support for H3ATW0 as seed ortholog is 100%.
Bootstrap support for D3AYJ4 as seed ortholog is 100%.

Group of orthologs #1303. Best score 208 bits
Score difference with first non-orthologous sequence - L.chalumnae:208 P.pallidum:208

H3AAX8              	100.00%		D3BMQ1              	100.00%
Bootstrap support for H3AAX8 as seed ortholog is 100%.
Bootstrap support for D3BMQ1 as seed ortholog is 100%.

Group of orthologs #1304. Best score 208 bits
Score difference with first non-orthologous sequence - L.chalumnae:150 P.pallidum:151

H3AJV0              	100.00%		D3BMT3              	100.00%
Bootstrap support for H3AJV0 as seed ortholog is 99%.
Bootstrap support for D3BMT3 as seed ortholog is 99%.

Group of orthologs #1305. Best score 208 bits
Score difference with first non-orthologous sequence - L.chalumnae:35 P.pallidum:208

H3B8D6              	100.00%		D3BAC7              	100.00%
Bootstrap support for H3B8D6 as seed ortholog is 94%.
Bootstrap support for D3BAC7 as seed ortholog is 100%.

Group of orthologs #1306. Best score 208 bits
Score difference with first non-orthologous sequence - L.chalumnae:208 P.pallidum:208

H3BAG8              	100.00%		D3BTU3              	100.00%
Bootstrap support for H3BAG8 as seed ortholog is 100%.
Bootstrap support for D3BTU3 as seed ortholog is 100%.

Group of orthologs #1307. Best score 207 bits
Score difference with first non-orthologous sequence - L.chalumnae:207 P.pallidum:207

H3AC43              	100.00%		D3B5E3              	100.00%
                    	       		D3BSB5              	32.61%
Bootstrap support for H3AC43 as seed ortholog is 100%.
Bootstrap support for D3B5E3 as seed ortholog is 100%.

Group of orthologs #1308. Best score 207 bits
Score difference with first non-orthologous sequence - L.chalumnae:15 P.pallidum:207

H2ZW84              	100.00%		D3B3I5              	100.00%
Bootstrap support for H2ZW84 as seed ortholog is 65%.
Alternative seed ortholog is H3APW1 (15 bits away from this cluster)
Bootstrap support for D3B3I5 as seed ortholog is 100%.

Group of orthologs #1309. Best score 207 bits
Score difference with first non-orthologous sequence - L.chalumnae:207 P.pallidum:22

H3ANE2              	100.00%		D3B2L3              	100.00%
Bootstrap support for H3ANE2 as seed ortholog is 100%.
Bootstrap support for D3B2L3 as seed ortholog is 59%.
Alternative seed ortholog is D3AXT2 (22 bits away from this cluster)

Group of orthologs #1310. Best score 207 bits
Score difference with first non-orthologous sequence - L.chalumnae:207 P.pallidum:207

H3ATN5              	100.00%		D3BVL7              	100.00%
Bootstrap support for H3ATN5 as seed ortholog is 100%.
Bootstrap support for D3BVL7 as seed ortholog is 100%.

Group of orthologs #1311. Best score 207 bits
Score difference with first non-orthologous sequence - L.chalumnae:207 P.pallidum:207

H3BE52              	100.00%		D3BNC0              	100.00%
Bootstrap support for H3BE52 as seed ortholog is 100%.
Bootstrap support for D3BNC0 as seed ortholog is 100%.

Group of orthologs #1312. Best score 206 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 P.pallidum:89

H3AS14              	100.00%		D3BG78              	100.00%
H3AR13              	36.65%		
H3B6P0              	32.67%		
Bootstrap support for H3AS14 as seed ortholog is 99%.
Bootstrap support for D3BG78 as seed ortholog is 99%.

Group of orthologs #1313. Best score 206 bits
Score difference with first non-orthologous sequence - L.chalumnae:206 P.pallidum:206

H3AP78              	100.00%		D3BK11              	100.00%
H3B9W9              	22.59%		
Bootstrap support for H3AP78 as seed ortholog is 100%.
Bootstrap support for D3BK11 as seed ortholog is 100%.

Group of orthologs #1314. Best score 206 bits
Score difference with first non-orthologous sequence - L.chalumnae:14 P.pallidum:97

H3B7V4              	100.00%		D3B5I3              	100.00%
H3BBV9              	100.00%		
Bootstrap support for H3B7V4 as seed ortholog is 68%.
Alternative seed ortholog is H3AJP2 (14 bits away from this cluster)
Bootstrap support for H3BBV9 as seed ortholog is 62%.
Alternative seed ortholog is H3AJP2 (14 bits away from this cluster)
Bootstrap support for D3B5I3 as seed ortholog is 99%.

Group of orthologs #1315. Best score 206 bits
Score difference with first non-orthologous sequence - L.chalumnae:206 P.pallidum:206

H3AWP5              	100.00%		D3BU33              	100.00%
H3APQ0              	15.48%		
Bootstrap support for H3AWP5 as seed ortholog is 100%.
Bootstrap support for D3BU33 as seed ortholog is 100%.

Group of orthologs #1316. Best score 205 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.pallidum:86

H3AT25              	100.00%		D3BGN7              	100.00%
H3B1Z3              	35.63%		D3BDA4              	15.82%
H3BBB2              	25.35%		
H3B9S0              	25.23%		
Bootstrap support for H3AT25 as seed ortholog is 98%.
Bootstrap support for D3BGN7 as seed ortholog is 97%.

Group of orthologs #1317. Best score 205 bits
Score difference with first non-orthologous sequence - L.chalumnae:205 P.pallidum:205

H3AMX3              	100.00%		D3BPI1              	100.00%
H3BIM3              	40.24%		
Bootstrap support for H3AMX3 as seed ortholog is 100%.
Bootstrap support for D3BPI1 as seed ortholog is 100%.

Group of orthologs #1318. Best score 205 bits
Score difference with first non-orthologous sequence - L.chalumnae:205 P.pallidum:205

H3BEM5              	100.00%		D3BT13              	100.00%
H3AC38              	42.26%		
Bootstrap support for H3BEM5 as seed ortholog is 100%.
Bootstrap support for D3BT13 as seed ortholog is 100%.

Group of orthologs #1319. Best score 205 bits
Score difference with first non-orthologous sequence - L.chalumnae:205 P.pallidum:205

H2ZZG3              	100.00%		D3BCB9              	100.00%
Bootstrap support for H2ZZG3 as seed ortholog is 100%.
Bootstrap support for D3BCB9 as seed ortholog is 100%.

Group of orthologs #1320. Best score 205 bits
Score difference with first non-orthologous sequence - L.chalumnae:205 P.pallidum:205

H3B1J9              	100.00%		D3AWH9              	100.00%
Bootstrap support for H3B1J9 as seed ortholog is 100%.
Bootstrap support for D3AWH9 as seed ortholog is 100%.

Group of orthologs #1321. Best score 205 bits
Score difference with first non-orthologous sequence - L.chalumnae:205 P.pallidum:205

H3ATE3              	100.00%		D3BN47              	100.00%
Bootstrap support for H3ATE3 as seed ortholog is 100%.
Bootstrap support for D3BN47 as seed ortholog is 100%.

Group of orthologs #1322. Best score 205 bits
Score difference with first non-orthologous sequence - L.chalumnae:41 P.pallidum:78

H3B317              	100.00%		D3BQ39              	100.00%
Bootstrap support for H3B317 as seed ortholog is 86%.
Bootstrap support for D3BQ39 as seed ortholog is 99%.

Group of orthologs #1323. Best score 204 bits
Score difference with first non-orthologous sequence - L.chalumnae:204 P.pallidum:204

H3AV39              	100.00%		D3B8W2              	100.00%
H3A0C5              	49.34%		
H3AC46              	38.02%		
Bootstrap support for H3AV39 as seed ortholog is 100%.
Bootstrap support for D3B8W2 as seed ortholog is 100%.

Group of orthologs #1324. Best score 204 bits
Score difference with first non-orthologous sequence - L.chalumnae:204 P.pallidum:204

H3AN65              	100.00%		D3BBQ0              	100.00%
H3BBR9              	30.21%		
Bootstrap support for H3AN65 as seed ortholog is 100%.
Bootstrap support for D3BBQ0 as seed ortholog is 100%.

Group of orthologs #1325. Best score 204 bits
Score difference with first non-orthologous sequence - L.chalumnae:204 P.pallidum:204

H3AP59              	100.00%		D3AVU9              	100.00%
Bootstrap support for H3AP59 as seed ortholog is 100%.
Bootstrap support for D3AVU9 as seed ortholog is 100%.

Group of orthologs #1326. Best score 204 bits
Score difference with first non-orthologous sequence - L.chalumnae:204 P.pallidum:204

H3B001              	100.00%		D3B6N9              	100.00%
Bootstrap support for H3B001 as seed ortholog is 100%.
Bootstrap support for D3B6N9 as seed ortholog is 100%.

Group of orthologs #1327. Best score 204 bits
Score difference with first non-orthologous sequence - L.chalumnae:204 P.pallidum:204

H3B798              	100.00%		D3B3C2              	100.00%
Bootstrap support for H3B798 as seed ortholog is 100%.
Bootstrap support for D3B3C2 as seed ortholog is 100%.

Group of orthologs #1328. Best score 204 bits
Score difference with first non-orthologous sequence - L.chalumnae:204 P.pallidum:204

H3AUG1              	100.00%		D3BEM8              	100.00%
Bootstrap support for H3AUG1 as seed ortholog is 100%.
Bootstrap support for D3BEM8 as seed ortholog is 100%.

Group of orthologs #1329. Best score 204 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.pallidum:73

H3BF67              	100.00%		D3BH42              	100.00%
Bootstrap support for H3BF67 as seed ortholog is 99%.
Bootstrap support for D3BH42 as seed ortholog is 99%.

Group of orthologs #1330. Best score 203 bits
Score difference with first non-orthologous sequence - L.chalumnae:132 P.pallidum:203

H3B5M9              	100.00%		D3BPU5              	100.00%
H3ADF7              	38.18%		
Bootstrap support for H3B5M9 as seed ortholog is 100%.
Bootstrap support for D3BPU5 as seed ortholog is 100%.

Group of orthologs #1331. Best score 203 bits
Score difference with first non-orthologous sequence - L.chalumnae:14 P.pallidum:55

H3A9V3              	100.00%		D3B716              	100.00%
Bootstrap support for H3A9V3 as seed ortholog is 61%.
Alternative seed ortholog is H3AHA4 (14 bits away from this cluster)
Bootstrap support for D3B716 as seed ortholog is 95%.

Group of orthologs #1332. Best score 203 bits
Score difference with first non-orthologous sequence - L.chalumnae:203 P.pallidum:203

H3ANB9              	100.00%		D3B2Y5              	100.00%
Bootstrap support for H3ANB9 as seed ortholog is 100%.
Bootstrap support for D3B2Y5 as seed ortholog is 100%.

Group of orthologs #1333. Best score 203 bits
Score difference with first non-orthologous sequence - L.chalumnae:203 P.pallidum:203

H3AZE6              	100.00%		D3B586              	100.00%
Bootstrap support for H3AZE6 as seed ortholog is 100%.
Bootstrap support for D3B586 as seed ortholog is 100%.

Group of orthologs #1334. Best score 202 bits
Score difference with first non-orthologous sequence - L.chalumnae:202 P.pallidum:202

H2ZXN9              	100.00%		D3BD59              	100.00%
Bootstrap support for H2ZXN9 as seed ortholog is 100%.
Bootstrap support for D3BD59 as seed ortholog is 100%.

Group of orthologs #1335. Best score 202 bits
Score difference with first non-orthologous sequence - L.chalumnae:202 P.pallidum:202

H3APJ4              	100.00%		D3BIW4              	100.00%
Bootstrap support for H3APJ4 as seed ortholog is 100%.
Bootstrap support for D3BIW4 as seed ortholog is 100%.

Group of orthologs #1336. Best score 202 bits
Score difference with first non-orthologous sequence - L.chalumnae:202 P.pallidum:202

H3AD86              	100.00%		D3BTV0              	100.00%
Bootstrap support for H3AD86 as seed ortholog is 100%.
Bootstrap support for D3BTV0 as seed ortholog is 100%.

Group of orthologs #1337. Best score 202 bits
Score difference with first non-orthologous sequence - L.chalumnae:202 P.pallidum:120

H3ALE6              	100.00%		D3BM05              	100.00%
Bootstrap support for H3ALE6 as seed ortholog is 100%.
Bootstrap support for D3BM05 as seed ortholog is 99%.

Group of orthologs #1338. Best score 202 bits
Score difference with first non-orthologous sequence - L.chalumnae:202 P.pallidum:202

H3AXQ5              	100.00%		D3BCR2              	100.00%
Bootstrap support for H3AXQ5 as seed ortholog is 100%.
Bootstrap support for D3BCR2 as seed ortholog is 100%.

Group of orthologs #1339. Best score 202 bits
Score difference with first non-orthologous sequence - L.chalumnae:202 P.pallidum:202

H3B520              	100.00%		D3BD97              	100.00%
Bootstrap support for H3B520 as seed ortholog is 100%.
Bootstrap support for D3BD97 as seed ortholog is 100%.

Group of orthologs #1340. Best score 201 bits
Score difference with first non-orthologous sequence - L.chalumnae:201 P.pallidum:83

H2ZXG2              	100.00%		D3AXA3              	100.00%
H3BH09              	33.32%		
Bootstrap support for H2ZXG2 as seed ortholog is 100%.
Bootstrap support for D3AXA3 as seed ortholog is 99%.

Group of orthologs #1341. Best score 201 bits
Score difference with first non-orthologous sequence - L.chalumnae:201 P.pallidum:201

H3A5R1              	100.00%		D3BMX5              	100.00%
H3ADD1              	93.75%		
Bootstrap support for H3A5R1 as seed ortholog is 100%.
Bootstrap support for D3BMX5 as seed ortholog is 100%.

Group of orthologs #1342. Best score 201 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.pallidum:79

H3AU78              	100.00%		D3BAH5              	100.00%
H3B227              	39.81%		
Bootstrap support for H3AU78 as seed ortholog is 97%.
Bootstrap support for D3BAH5 as seed ortholog is 98%.

Group of orthologs #1343. Best score 201 bits
Score difference with first non-orthologous sequence - L.chalumnae:201 P.pallidum:201

H3AHT8              	100.00%		D3AX29              	100.00%
Bootstrap support for H3AHT8 as seed ortholog is 100%.
Bootstrap support for D3AX29 as seed ortholog is 100%.

Group of orthologs #1344. Best score 201 bits
Score difference with first non-orthologous sequence - L.chalumnae:201 P.pallidum:201

H3ARF9              	100.00%		D3B2G1              	100.00%
Bootstrap support for H3ARF9 as seed ortholog is 100%.
Bootstrap support for D3B2G1 as seed ortholog is 100%.

Group of orthologs #1345. Best score 201 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 P.pallidum:99

H3B6P3              	100.00%		D3AWH3              	100.00%
Bootstrap support for H3B6P3 as seed ortholog is 99%.
Bootstrap support for D3AWH3 as seed ortholog is 99%.

Group of orthologs #1346. Best score 201 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.pallidum:201

H3B2B2              	100.00%		D3B5U7              	100.00%
Bootstrap support for H3B2B2 as seed ortholog is 99%.
Bootstrap support for D3B5U7 as seed ortholog is 100%.

Group of orthologs #1347. Best score 201 bits
Score difference with first non-orthologous sequence - L.chalumnae:201 P.pallidum:201

H3AK52              	100.00%		D3BQU5              	100.00%
Bootstrap support for H3AK52 as seed ortholog is 100%.
Bootstrap support for D3BQU5 as seed ortholog is 100%.

Group of orthologs #1348. Best score 201 bits
Score difference with first non-orthologous sequence - L.chalumnae:201 P.pallidum:201

H3BIG3              	100.00%		D3BCA0              	100.00%
Bootstrap support for H3BIG3 as seed ortholog is 100%.
Bootstrap support for D3BCA0 as seed ortholog is 100%.

Group of orthologs #1349. Best score 200 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 P.pallidum:200

H3B5V4              	100.00%		D3BGZ6              	100.00%
M3XHC3              	41.45%		
H3AW83              	15.68%		
H3BDJ0              	10.10%		
H2ZRU4              	7.48%		
Bootstrap support for H3B5V4 as seed ortholog is 99%.
Bootstrap support for D3BGZ6 as seed ortholog is 100%.

Group of orthologs #1350. Best score 200 bits
Score difference with first non-orthologous sequence - L.chalumnae:200 P.pallidum:200

H3AZW6              	100.00%		D3BF37              	100.00%
H3A7J4              	36.57%		
H3AYV9              	29.91%		
Bootstrap support for H3AZW6 as seed ortholog is 100%.
Bootstrap support for D3BF37 as seed ortholog is 100%.

Group of orthologs #1351. Best score 200 bits
Score difference with first non-orthologous sequence - L.chalumnae:200 P.pallidum:200

H3AC34              	100.00%		D3BSY9              	100.00%
H3BF37              	56.74%		
Bootstrap support for H3AC34 as seed ortholog is 100%.
Bootstrap support for D3BSY9 as seed ortholog is 100%.

Group of orthologs #1352. Best score 200 bits
Score difference with first non-orthologous sequence - L.chalumnae:200 P.pallidum:200

H3A401              	100.00%		D3BHJ9              	100.00%
Bootstrap support for H3A401 as seed ortholog is 100%.
Bootstrap support for D3BHJ9 as seed ortholog is 100%.

Group of orthologs #1353. Best score 200 bits
Score difference with first non-orthologous sequence - L.chalumnae:200 P.pallidum:200

H3ARX8              	100.00%		D3B1K3              	100.00%
Bootstrap support for H3ARX8 as seed ortholog is 100%.
Bootstrap support for D3B1K3 as seed ortholog is 100%.

Group of orthologs #1354. Best score 200 bits
Score difference with first non-orthologous sequence - L.chalumnae:200 P.pallidum:200

H2ZVH4              	100.00%		D3BTM7              	100.00%
Bootstrap support for H2ZVH4 as seed ortholog is 100%.
Bootstrap support for D3BTM7 as seed ortholog is 100%.

Group of orthologs #1355. Best score 200 bits
Score difference with first non-orthologous sequence - L.chalumnae:200 P.pallidum:200

H3AQK0              	100.00%		D3BCH7              	100.00%
Bootstrap support for H3AQK0 as seed ortholog is 100%.
Bootstrap support for D3BCH7 as seed ortholog is 100%.

Group of orthologs #1356. Best score 200 bits
Score difference with first non-orthologous sequence - L.chalumnae:200 P.pallidum:200

H3AZS2              	100.00%		D3BPP6              	100.00%
Bootstrap support for H3AZS2 as seed ortholog is 100%.
Bootstrap support for D3BPP6 as seed ortholog is 100%.

Group of orthologs #1357. Best score 199 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.pallidum:35

H3ALY9              	100.00%		D3B0Q7              	100.00%
H3A940              	28.09%		
H3AAF2              	21.77%		
H3BEM2              	12.77%		
Bootstrap support for H3ALY9 as seed ortholog is 85%.
Bootstrap support for D3B0Q7 as seed ortholog is 84%.

Group of orthologs #1358. Best score 199 bits
Score difference with first non-orthologous sequence - L.chalumnae:199 P.pallidum:199

H3B7J4              	100.00%		D3AW95              	100.00%
H2ZYC7              	41.51%		
H3BGD0              	35.94%		
Bootstrap support for H3B7J4 as seed ortholog is 100%.
Bootstrap support for D3AW95 as seed ortholog is 100%.

Group of orthologs #1359. Best score 199 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 P.pallidum:34

H3B637              	100.00%		D3BRF5              	100.00%
H3A410              	11.44%		D3BMM2              	25.37%
Bootstrap support for H3B637 as seed ortholog is 78%.
Bootstrap support for D3BRF5 as seed ortholog is 72%.
Alternative seed ortholog is D3AYT3 (34 bits away from this cluster)

Group of orthologs #1360. Best score 199 bits
Score difference with first non-orthologous sequence - L.chalumnae:98 P.pallidum:199

H3A6C2              	100.00%		D3AYY2              	100.00%
Bootstrap support for H3A6C2 as seed ortholog is 98%.
Bootstrap support for D3AYY2 as seed ortholog is 100%.

Group of orthologs #1361. Best score 199 bits
Score difference with first non-orthologous sequence - L.chalumnae:199 P.pallidum:199

H3AL27              	100.00%		D3AWF3              	100.00%
Bootstrap support for H3AL27 as seed ortholog is 100%.
Bootstrap support for D3AWF3 as seed ortholog is 100%.

Group of orthologs #1362. Best score 199 bits
Score difference with first non-orthologous sequence - L.chalumnae:199 P.pallidum:199

H3B914              	100.00%		D3BG91              	100.00%
Bootstrap support for H3B914 as seed ortholog is 100%.
Bootstrap support for D3BG91 as seed ortholog is 100%.

Group of orthologs #1363. Best score 199 bits
Score difference with first non-orthologous sequence - L.chalumnae:199 P.pallidum:199

H3BCQ0              	100.00%		D3BI84              	100.00%
Bootstrap support for H3BCQ0 as seed ortholog is 100%.
Bootstrap support for D3BI84 as seed ortholog is 100%.

Group of orthologs #1364. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 P.pallidum:198

H3B0N4              	100.00%		D3B1C2              	100.00%
H3AR95              	37.94%		
Bootstrap support for H3B0N4 as seed ortholog is 100%.
Bootstrap support for D3B1C2 as seed ortholog is 100%.

Group of orthologs #1365. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 P.pallidum:198

H3A1A8              	100.00%		D3BF12              	100.00%
Bootstrap support for H3A1A8 as seed ortholog is 100%.
Bootstrap support for D3BF12 as seed ortholog is 100%.

Group of orthologs #1366. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:3 P.pallidum:198

H3AQU2              	100.00%		D3B8J0              	100.00%
Bootstrap support for H3AQU2 as seed ortholog is 52%.
Alternative seed ortholog is H3A878 (3 bits away from this cluster)
Bootstrap support for D3B8J0 as seed ortholog is 100%.

Group of orthologs #1367. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.pallidum:198

H3B5T9              	100.00%		D3BAF1              	100.00%
Bootstrap support for H3B5T9 as seed ortholog is 99%.
Bootstrap support for D3BAF1 as seed ortholog is 100%.

Group of orthologs #1368. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 P.pallidum:198

H3BB50              	100.00%		D3B7V8              	100.00%
Bootstrap support for H3BB50 as seed ortholog is 100%.
Bootstrap support for D3B7V8 as seed ortholog is 100%.

Group of orthologs #1369. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 P.pallidum:198

H3BGL5              	100.00%		D3B4P2              	100.00%
Bootstrap support for H3BGL5 as seed ortholog is 100%.
Bootstrap support for D3B4P2 as seed ortholog is 100%.

Group of orthologs #1370. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 P.pallidum:151

H3BFQ5              	100.00%		D3BMX0              	100.00%
Bootstrap support for H3BFQ5 as seed ortholog is 100%.
Bootstrap support for D3BMX0 as seed ortholog is 100%.

Group of orthologs #1371. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.pallidum:151

H3BH65              	100.00%		D3BRK5              	100.00%
Bootstrap support for H3BH65 as seed ortholog is 99%.
Bootstrap support for D3BRK5 as seed ortholog is 100%.

Group of orthologs #1372. Best score 197 bits
Score difference with first non-orthologous sequence - L.chalumnae:197 P.pallidum:197

H3AK79              	100.00%		D3BIM6              	100.00%
Bootstrap support for H3AK79 as seed ortholog is 100%.
Bootstrap support for D3BIM6 as seed ortholog is 100%.

Group of orthologs #1373. Best score 197 bits
Score difference with first non-orthologous sequence - L.chalumnae:197 P.pallidum:197

H3AUN7              	100.00%		D3BGB0              	100.00%
Bootstrap support for H3AUN7 as seed ortholog is 100%.
Bootstrap support for D3BGB0 as seed ortholog is 100%.

Group of orthologs #1374. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:196 P.pallidum:196

H3BEG5              	100.00%		D3BKU3              	100.00%
M3XI53              	24.70%		
Bootstrap support for H3BEG5 as seed ortholog is 100%.
Bootstrap support for D3BKU3 as seed ortholog is 100%.

Group of orthologs #1375. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:196 P.pallidum:196

H3AGH6              	100.00%		D3B790              	100.00%
Bootstrap support for H3AGH6 as seed ortholog is 100%.
Bootstrap support for D3B790 as seed ortholog is 100%.

Group of orthologs #1376. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:196 P.pallidum:196

H3A7E0              	100.00%		D3BMF6              	100.00%
Bootstrap support for H3A7E0 as seed ortholog is 100%.
Bootstrap support for D3BMF6 as seed ortholog is 100%.

Group of orthologs #1377. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:196 P.pallidum:196

H3AFQ2              	100.00%		D3BU38              	100.00%
Bootstrap support for H3AFQ2 as seed ortholog is 100%.
Bootstrap support for D3BU38 as seed ortholog is 100%.

Group of orthologs #1378. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:196 P.pallidum:196

H3APH1              	100.00%		D3BNV1              	100.00%
Bootstrap support for H3APH1 as seed ortholog is 100%.
Bootstrap support for D3BNV1 as seed ortholog is 100%.

Group of orthologs #1379. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:196 P.pallidum:196

H3BIC0              	100.00%		D3B117              	100.00%
Bootstrap support for H3BIC0 as seed ortholog is 100%.
Bootstrap support for D3B117 as seed ortholog is 100%.

Group of orthologs #1380. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.pallidum:42

H3B3Q1              	100.00%		D3BJ95              	100.00%
Bootstrap support for H3B3Q1 as seed ortholog is 99%.
Bootstrap support for D3BJ95 as seed ortholog is 99%.

Group of orthologs #1381. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:196 P.pallidum:196

H3ASJ3              	100.00%		D3BUS7              	100.00%
Bootstrap support for H3ASJ3 as seed ortholog is 100%.
Bootstrap support for D3BUS7 as seed ortholog is 100%.

Group of orthologs #1382. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.pallidum:196

H3BFE0              	100.00%		D3BB26              	100.00%
Bootstrap support for H3BFE0 as seed ortholog is 91%.
Bootstrap support for D3BB26 as seed ortholog is 100%.

Group of orthologs #1383. Best score 195 bits
Score difference with first non-orthologous sequence - L.chalumnae:100 P.pallidum:195

M3XIA4              	100.00%		D3AX33              	100.00%
H2ZZX0              	100.00%		D3BRR3              	100.00%
                    	       		D3B1V4              	95.11%
                    	       		D3B4V4              	95.03%
                    	       		D3BS08              	95.03%
                    	       		D3BN20              	21.99%
                    	       		D3B9Z8              	21.83%
Bootstrap support for M3XIA4 as seed ortholog is 97%.
Bootstrap support for H2ZZX0 as seed ortholog is 92%.
Bootstrap support for D3AX33 as seed ortholog is 100%.
Bootstrap support for D3BRR3 as seed ortholog is 100%.

Group of orthologs #1384. Best score 195 bits
Score difference with first non-orthologous sequence - L.chalumnae:195 P.pallidum:195

H3B6R1              	100.00%		D3B9R9              	100.00%
H2ZT11              	100.00%		D3BFW1              	100.00%
H3BBU5              	40.72%		D3BSC6              	16.86%
Bootstrap support for H3B6R1 as seed ortholog is 100%.
Bootstrap support for H2ZT11 as seed ortholog is 100%.
Bootstrap support for D3B9R9 as seed ortholog is 100%.
Bootstrap support for D3BFW1 as seed ortholog is 100%.

Group of orthologs #1385. Best score 195 bits
Score difference with first non-orthologous sequence - L.chalumnae:195 P.pallidum:195

H2ZXK8              	100.00%		D3AW89              	100.00%
Bootstrap support for H2ZXK8 as seed ortholog is 100%.
Bootstrap support for D3AW89 as seed ortholog is 100%.

Group of orthologs #1386. Best score 195 bits
Score difference with first non-orthologous sequence - L.chalumnae:195 P.pallidum:195

H3A3E4              	100.00%		D3AXW3              	100.00%
Bootstrap support for H3A3E4 as seed ortholog is 100%.
Bootstrap support for D3AXW3 as seed ortholog is 100%.

Group of orthologs #1387. Best score 195 bits
Score difference with first non-orthologous sequence - L.chalumnae:195 P.pallidum:195

H3AMQ6              	100.00%		D3B6M1              	100.00%
Bootstrap support for H3AMQ6 as seed ortholog is 100%.
Bootstrap support for D3B6M1 as seed ortholog is 100%.

Group of orthologs #1388. Best score 195 bits
Score difference with first non-orthologous sequence - L.chalumnae:195 P.pallidum:195

H3AAQ8              	100.00%		D3BML2              	100.00%
Bootstrap support for H3AAQ8 as seed ortholog is 100%.
Bootstrap support for D3BML2 as seed ortholog is 100%.

Group of orthologs #1389. Best score 195 bits
Score difference with first non-orthologous sequence - L.chalumnae:41 P.pallidum:115

H3API9              	100.00%		D3BJW0              	100.00%
Bootstrap support for H3API9 as seed ortholog is 94%.
Bootstrap support for D3BJW0 as seed ortholog is 99%.

Group of orthologs #1390. Best score 195 bits
Score difference with first non-orthologous sequence - L.chalumnae:195 P.pallidum:195

H3BIK6              	100.00%		D3B4A0              	100.00%
Bootstrap support for H3BIK6 as seed ortholog is 100%.
Bootstrap support for D3B4A0 as seed ortholog is 100%.

Group of orthologs #1391. Best score 194 bits
Score difference with first non-orthologous sequence - L.chalumnae:98 P.pallidum:194

H3B169              	100.00%		D3AW01              	100.00%
H2ZYV3              	19.37%		
H2ZTW7              	15.32%		
H3A6F5              	13.06%		
H3B4N0              	10.81%		
Bootstrap support for H3B169 as seed ortholog is 99%.
Bootstrap support for D3AW01 as seed ortholog is 100%.

Group of orthologs #1392. Best score 194 bits
Score difference with first non-orthologous sequence - L.chalumnae:194 P.pallidum:194

H3A5R7              	100.00%		D3B5H1              	100.00%
H3A6H4              	53.65%		
Bootstrap support for H3A5R7 as seed ortholog is 100%.
Bootstrap support for D3B5H1 as seed ortholog is 100%.

Group of orthologs #1393. Best score 194 bits
Score difference with first non-orthologous sequence - L.chalumnae:194 P.pallidum:194

H3A9D8              	100.00%		D3BB60              	100.00%
H3ATU1              	5.32%		
Bootstrap support for H3A9D8 as seed ortholog is 100%.
Bootstrap support for D3BB60 as seed ortholog is 100%.

Group of orthologs #1394. Best score 194 bits
Score difference with first non-orthologous sequence - L.chalumnae:194 P.pallidum:194

H3A0P8              	100.00%		D3BUT2              	100.00%
                    	       		D3B7P2              	16.34%
Bootstrap support for H3A0P8 as seed ortholog is 100%.
Bootstrap support for D3BUT2 as seed ortholog is 100%.

Group of orthologs #1395. Best score 194 bits
Score difference with first non-orthologous sequence - L.chalumnae:194 P.pallidum:194

H3AGJ9              	100.00%		D3BI43              	100.00%
H3B996              	42.81%		
Bootstrap support for H3AGJ9 as seed ortholog is 100%.
Bootstrap support for D3BI43 as seed ortholog is 100%.

Group of orthologs #1396. Best score 194 bits
Score difference with first non-orthologous sequence - L.chalumnae:143 P.pallidum:194

H3B824              	100.00%		D3BFU7              	100.00%
H3BAL5              	65.57%		
Bootstrap support for H3B824 as seed ortholog is 100%.
Bootstrap support for D3BFU7 as seed ortholog is 100%.

Group of orthologs #1397. Best score 194 bits
Score difference with first non-orthologous sequence - L.chalumnae:194 P.pallidum:194

H3AIB6              	100.00%		D3AY50              	100.00%
Bootstrap support for H3AIB6 as seed ortholog is 100%.
Bootstrap support for D3AY50 as seed ortholog is 100%.

Group of orthologs #1398. Best score 194 bits
Score difference with first non-orthologous sequence - L.chalumnae:194 P.pallidum:194

H3A1K9              	100.00%		D3BRM0              	100.00%
Bootstrap support for H3A1K9 as seed ortholog is 100%.
Bootstrap support for D3BRM0 as seed ortholog is 100%.

Group of orthologs #1399. Best score 194 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 P.pallidum:194

H3AH73              	100.00%		D3BDL0              	100.00%
Bootstrap support for H3AH73 as seed ortholog is 95%.
Bootstrap support for D3BDL0 as seed ortholog is 100%.

Group of orthologs #1400. Best score 194 bits
Score difference with first non-orthologous sequence - L.chalumnae:194 P.pallidum:194

H3AL29              	100.00%		D3BGF4              	100.00%
Bootstrap support for H3AL29 as seed ortholog is 100%.
Bootstrap support for D3BGF4 as seed ortholog is 100%.

Group of orthologs #1401. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:20 P.pallidum:193

H3AQF2              	100.00%		D3BUI9              	100.00%
H3ADH0              	43.51%		D3BCF4              	10.61%
Bootstrap support for H3AQF2 as seed ortholog is 68%.
Alternative seed ortholog is H3BGS1 (20 bits away from this cluster)
Bootstrap support for D3BUI9 as seed ortholog is 100%.

Group of orthologs #1402. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 P.pallidum:193

H3BDU9              	100.00%		D3BBX5              	100.00%
                    	       		D3BT53              	38.53%
Bootstrap support for H3BDU9 as seed ortholog is 93%.
Bootstrap support for D3BBX5 as seed ortholog is 100%.

Group of orthologs #1403. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:193 P.pallidum:193

M3XK17              	100.00%		D3B7M3              	100.00%
H3A264              	9.98%		
Bootstrap support for M3XK17 as seed ortholog is 100%.
Bootstrap support for D3B7M3 as seed ortholog is 100%.

Group of orthologs #1404. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 P.pallidum:193

H2ZS23              	100.00%		D3B8K2              	100.00%
Bootstrap support for H2ZS23 as seed ortholog is 97%.
Bootstrap support for D3B8K2 as seed ortholog is 100%.

Group of orthologs #1405. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:193 P.pallidum:193

H3A4L5              	100.00%		D3AXW4              	100.00%
Bootstrap support for H3A4L5 as seed ortholog is 100%.
Bootstrap support for D3AXW4 as seed ortholog is 100%.

Group of orthologs #1406. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:118 P.pallidum:193

H3AB91              	100.00%		D3B7Z4              	100.00%
Bootstrap support for H3AB91 as seed ortholog is 99%.
Bootstrap support for D3B7Z4 as seed ortholog is 100%.

Group of orthologs #1407. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:193 P.pallidum:193

H3B6U1              	100.00%		D3B1N8              	100.00%
Bootstrap support for H3B6U1 as seed ortholog is 100%.
Bootstrap support for D3B1N8 as seed ortholog is 100%.

Group of orthologs #1408. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:193 P.pallidum:193

H3BID0              	100.00%		D3BEF2              	100.00%
Bootstrap support for H3BID0 as seed ortholog is 100%.
Bootstrap support for D3BEF2 as seed ortholog is 100%.

Group of orthologs #1409. Best score 192 bits
Score difference with first non-orthologous sequence - L.chalumnae:20 P.pallidum:83

H3AB76              	100.00%		D3BJU4              	100.00%
H3AI22              	76.68%		D3BAU0              	24.92%
Bootstrap support for H3AB76 as seed ortholog is 63%.
Alternative seed ortholog is M3XGK5 (20 bits away from this cluster)
Bootstrap support for D3BJU4 as seed ortholog is 99%.

Group of orthologs #1410. Best score 192 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 P.pallidum:112

H3ALI6              	100.00%		D3B5N8              	100.00%
Bootstrap support for H3ALI6 as seed ortholog is 98%.
Bootstrap support for D3B5N8 as seed ortholog is 99%.

Group of orthologs #1411. Best score 192 bits
Score difference with first non-orthologous sequence - L.chalumnae:13 P.pallidum:42

H3AHL6              	100.00%		D3BV74              	100.00%
Bootstrap support for H3AHL6 as seed ortholog is 61%.
Alternative seed ortholog is H3AXV8 (13 bits away from this cluster)
Bootstrap support for D3BV74 as seed ortholog is 82%.

Group of orthologs #1412. Best score 191 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 P.pallidum:191

H3BDU2              	100.00%		D3BJ85              	100.00%
H3A0X5              	36.46%		
H3A105              	26.42%		
Bootstrap support for H3BDU2 as seed ortholog is 93%.
Bootstrap support for D3BJ85 as seed ortholog is 100%.

Group of orthologs #1413. Best score 191 bits
Score difference with first non-orthologous sequence - L.chalumnae:191 P.pallidum:191

H3A7F4              	100.00%		D3B056              	100.00%
Bootstrap support for H3A7F4 as seed ortholog is 100%.
Bootstrap support for D3B056 as seed ortholog is 100%.

Group of orthologs #1414. Best score 191 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 P.pallidum:105

H3AQ76              	100.00%		D3B352              	100.00%
Bootstrap support for H3AQ76 as seed ortholog is 98%.
Bootstrap support for D3B352 as seed ortholog is 94%.

Group of orthologs #1415. Best score 191 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.pallidum:191

H3ADS7              	100.00%		D3BP64              	100.00%
Bootstrap support for H3ADS7 as seed ortholog is 99%.
Bootstrap support for D3BP64 as seed ortholog is 100%.

Group of orthologs #1416. Best score 191 bits
Score difference with first non-orthologous sequence - L.chalumnae:191 P.pallidum:77

H3B1G7              	100.00%		D3B614              	100.00%
Bootstrap support for H3B1G7 as seed ortholog is 100%.
Bootstrap support for D3B614 as seed ortholog is 98%.

Group of orthologs #1417. Best score 191 bits
Score difference with first non-orthologous sequence - L.chalumnae:191 P.pallidum:191

H3B160              	100.00%		D3BEP7              	100.00%
Bootstrap support for H3B160 as seed ortholog is 100%.
Bootstrap support for D3BEP7 as seed ortholog is 100%.

Group of orthologs #1418. Best score 191 bits
Score difference with first non-orthologous sequence - L.chalumnae:117 P.pallidum:12

H3BHE6              	100.00%		D3B8B5              	100.00%
Bootstrap support for H3BHE6 as seed ortholog is 100%.
Bootstrap support for D3B8B5 as seed ortholog is 26%.
Alternative seed ortholog is D3B747 (12 bits away from this cluster)

Group of orthologs #1419. Best score 191 bits
Score difference with first non-orthologous sequence - L.chalumnae:191 P.pallidum:191

H3BHA1              	100.00%		D3BAC6              	100.00%
Bootstrap support for H3BHA1 as seed ortholog is 100%.
Bootstrap support for D3BAC6 as seed ortholog is 100%.

Group of orthologs #1420. Best score 190 bits
Score difference with first non-orthologous sequence - L.chalumnae:190 P.pallidum:190

H2ZSW5              	100.00%		D3AWR4              	100.00%
Bootstrap support for H2ZSW5 as seed ortholog is 100%.
Bootstrap support for D3AWR4 as seed ortholog is 100%.

Group of orthologs #1421. Best score 190 bits
Score difference with first non-orthologous sequence - L.chalumnae:190 P.pallidum:190

H2ZUW6              	100.00%		D3B279              	100.00%
Bootstrap support for H2ZUW6 as seed ortholog is 100%.
Bootstrap support for D3B279 as seed ortholog is 100%.

Group of orthologs #1422. Best score 190 bits
Score difference with first non-orthologous sequence - L.chalumnae:190 P.pallidum:190

H3A4Q5              	100.00%		D3AXG8              	100.00%
Bootstrap support for H3A4Q5 as seed ortholog is 100%.
Bootstrap support for D3AXG8 as seed ortholog is 100%.

Group of orthologs #1423. Best score 190 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 P.pallidum:190

H3A2B6              	100.00%		D3BKT0              	100.00%
Bootstrap support for H3A2B6 as seed ortholog is 99%.
Bootstrap support for D3BKT0 as seed ortholog is 100%.

Group of orthologs #1424. Best score 190 bits
Score difference with first non-orthologous sequence - L.chalumnae:190 P.pallidum:190

H3ASH8              	100.00%		D3BMH8              	100.00%
Bootstrap support for H3ASH8 as seed ortholog is 100%.
Bootstrap support for D3BMH8 as seed ortholog is 100%.

Group of orthologs #1425. Best score 190 bits
Score difference with first non-orthologous sequence - L.chalumnae:190 P.pallidum:190

H3BFT6              	100.00%		D3B5J6              	100.00%
Bootstrap support for H3BFT6 as seed ortholog is 100%.
Bootstrap support for D3B5J6 as seed ortholog is 100%.

Group of orthologs #1426. Best score 190 bits
Score difference with first non-orthologous sequence - L.chalumnae:190 P.pallidum:190

H3BIS6              	100.00%		D3B7B3              	100.00%
Bootstrap support for H3BIS6 as seed ortholog is 100%.
Bootstrap support for D3B7B3 as seed ortholog is 100%.

Group of orthologs #1427. Best score 190 bits
Score difference with first non-orthologous sequence - L.chalumnae:190 P.pallidum:190

H3BHU1              	100.00%		D3BC43              	100.00%
Bootstrap support for H3BHU1 as seed ortholog is 100%.
Bootstrap support for D3BC43 as seed ortholog is 100%.

Group of orthologs #1428. Best score 190 bits
Score difference with first non-orthologous sequence - L.chalumnae:190 P.pallidum:190

H3B8C1              	100.00%		D3BLM4              	100.00%
Bootstrap support for H3B8C1 as seed ortholog is 100%.
Bootstrap support for D3BLM4 as seed ortholog is 100%.

Group of orthologs #1429. Best score 190 bits
Score difference with first non-orthologous sequence - L.chalumnae:190 P.pallidum:190

H3BFK4              	100.00%		D3BRM7              	100.00%
Bootstrap support for H3BFK4 as seed ortholog is 100%.
Bootstrap support for D3BRM7 as seed ortholog is 100%.

Group of orthologs #1430. Best score 190 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.pallidum:190

H3BDA3              	100.00%		D3BUN5              	100.00%
Bootstrap support for H3BDA3 as seed ortholog is 99%.
Bootstrap support for D3BUN5 as seed ortholog is 100%.

Group of orthologs #1431. Best score 189 bits
Score difference with first non-orthologous sequence - L.chalumnae:18 P.pallidum:74

H2ZZ92              	100.00%		D3BRT8              	100.00%
H2ZYQ2              	19.48%		
Bootstrap support for H2ZZ92 as seed ortholog is 84%.
Bootstrap support for D3BRT8 as seed ortholog is 98%.

Group of orthologs #1432. Best score 189 bits
Score difference with first non-orthologous sequence - L.chalumnae:6 P.pallidum:107

H2ZX92              	100.00%		D3BUR4              	100.00%
H3AEB1              	33.26%		
Bootstrap support for H2ZX92 as seed ortholog is 55%.
Alternative seed ortholog is H3A8J3 (6 bits away from this cluster)
Bootstrap support for D3BUR4 as seed ortholog is 99%.

Group of orthologs #1433. Best score 189 bits
Score difference with first non-orthologous sequence - L.chalumnae:189 P.pallidum:189

H3BEK4              	100.00%		D3BT39              	100.00%
H3BI26              	48.84%		
Bootstrap support for H3BEK4 as seed ortholog is 100%.
Bootstrap support for D3BT39 as seed ortholog is 100%.

Group of orthologs #1434. Best score 189 bits
Score difference with first non-orthologous sequence - L.chalumnae:189 P.pallidum:189

H3AGN4              	100.00%		D3B963              	100.00%
Bootstrap support for H3AGN4 as seed ortholog is 100%.
Bootstrap support for D3B963 as seed ortholog is 100%.

Group of orthologs #1435. Best score 189 bits
Score difference with first non-orthologous sequence - L.chalumnae:189 P.pallidum:189

H3AN27              	100.00%		D3BAF0              	100.00%
Bootstrap support for H3AN27 as seed ortholog is 100%.
Bootstrap support for D3BAF0 as seed ortholog is 100%.

Group of orthologs #1436. Best score 189 bits
Score difference with first non-orthologous sequence - L.chalumnae:31 P.pallidum:189

H3B999              	100.00%		D3B6K0              	100.00%
Bootstrap support for H3B999 as seed ortholog is 80%.
Bootstrap support for D3B6K0 as seed ortholog is 100%.

Group of orthologs #1437. Best score 189 bits
Score difference with first non-orthologous sequence - L.chalumnae:189 P.pallidum:189

H3B5B2              	100.00%		D3BRN9              	100.00%
Bootstrap support for H3B5B2 as seed ortholog is 100%.
Bootstrap support for D3BRN9 as seed ortholog is 100%.

Group of orthologs #1438. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.pallidum:58

H3AS13              	100.00%		D3B1H8              	100.00%
H3AM34              	100.00%		D3BC34              	100.00%
H3AF76              	100.00%		D3BVQ0              	100.00%
H3APN0              	69.68%		D3B1Z2              	47.14%
H3AT94              	44.87%		D3BC35              	42.07%
H3ANT2              	20.96%		D3B4T3              	31.79%
H3B0T1              	10.07%		D3B333              	28.72%
H2ZSH7              	5.15%		D3BBW1              	26.54%
                    	       		D3BR59              	21.03%
                    	       		D3BR82              	20.38%
                    	       		D3BR81              	18.72%
                    	       		D3B5Y3              	16.41%
                    	       		D3BHN0              	13.97%
                    	       		D3BBW2              	12.68%
                    	       		D3B1N0              	9.49%
                    	       		D3B5Y4              	9.23%
                    	       		D3BRS5              	5.51%
Bootstrap support for H3AS13 as seed ortholog is 95%.
Bootstrap support for H3AM34 as seed ortholog is 80%.
Bootstrap support for H3AF76 as seed ortholog is 70%.
Alternative seed ortholog is H3BF84 (75 bits away from this cluster)
Bootstrap support for D3B1H8 as seed ortholog is 89%.
Bootstrap support for D3BC34 as seed ortholog is 82%.
Bootstrap support for D3BVQ0 as seed ortholog is 57%.
Alternative seed ortholog is D3AZI7 (58 bits away from this cluster)

Group of orthologs #1439. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.pallidum:188

H3A8Y7              	100.00%		D3B062              	100.00%
H3BDI8              	36.67%		
H3AMT3              	33.11%		
Bootstrap support for H3A8Y7 as seed ortholog is 99%.
Bootstrap support for D3B062 as seed ortholog is 100%.

Group of orthologs #1440. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:188 P.pallidum:188

H3B1P4              	100.00%		D3BLS8              	100.00%
H3AA71              	33.87%		
Bootstrap support for H3B1P4 as seed ortholog is 100%.
Bootstrap support for D3BLS8 as seed ortholog is 100%.

Group of orthologs #1441. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:188 P.pallidum:188

H3AKL5              	100.00%		D3BM23              	100.00%
Bootstrap support for H3AKL5 as seed ortholog is 100%.
Bootstrap support for D3BM23 as seed ortholog is 100%.

Group of orthologs #1442. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:188 P.pallidum:188

H3BES2              	100.00%		D3AY25              	100.00%
Bootstrap support for H3BES2 as seed ortholog is 100%.
Bootstrap support for D3AY25 as seed ortholog is 100%.

Group of orthologs #1443. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.pallidum:82

H3BH69              	100.00%		D3AYS3              	100.00%
Bootstrap support for H3BH69 as seed ortholog is 99%.
Bootstrap support for D3AYS3 as seed ortholog is 99%.

Group of orthologs #1444. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:188 P.pallidum:188

H3B9K8              	100.00%		D3BFD8              	100.00%
Bootstrap support for H3B9K8 as seed ortholog is 100%.
Bootstrap support for D3BFD8 as seed ortholog is 100%.

Group of orthologs #1445. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:17 P.pallidum:188

H3B8P8              	100.00%		D3BQN4              	100.00%
Bootstrap support for H3B8P8 as seed ortholog is 68%.
Alternative seed ortholog is H3A457 (17 bits away from this cluster)
Bootstrap support for D3BQN4 as seed ortholog is 100%.

Group of orthologs #1446. Best score 187 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 P.pallidum:187

H2ZYS6              	100.00%		D3BSZ1              	100.00%
H3B897              	35.23%		D3BGI1              	13.48%
Bootstrap support for H2ZYS6 as seed ortholog is 90%.
Bootstrap support for D3BSZ1 as seed ortholog is 100%.

Group of orthologs #1447. Best score 187 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 P.pallidum:187

H3A4V6              	100.00%		D3AZF9              	100.00%
Bootstrap support for H3A4V6 as seed ortholog is 100%.
Bootstrap support for D3AZF9 as seed ortholog is 100%.

Group of orthologs #1448. Best score 187 bits
Score difference with first non-orthologous sequence - L.chalumnae:187 P.pallidum:187

H3A3X2              	100.00%		D3B3V7              	100.00%
Bootstrap support for H3A3X2 as seed ortholog is 100%.
Bootstrap support for D3B3V7 as seed ortholog is 100%.

Group of orthologs #1449. Best score 187 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 P.pallidum:60

H3ATN2              	100.00%		D3BEJ9              	100.00%
Bootstrap support for H3ATN2 as seed ortholog is 99%.
Bootstrap support for D3BEJ9 as seed ortholog is 97%.

Group of orthologs #1450. Best score 187 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 P.pallidum:187

H3B4Q3              	100.00%		D3BNY3              	100.00%
Bootstrap support for H3B4Q3 as seed ortholog is 99%.
Bootstrap support for D3BNY3 as seed ortholog is 100%.

Group of orthologs #1451. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 P.pallidum:116

H3A7T6              	100.00%		D3B554              	100.00%
H3AS02              	68.59%		
Bootstrap support for H3A7T6 as seed ortholog is 98%.
Bootstrap support for D3B554 as seed ortholog is 99%.

Group of orthologs #1452. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:186 P.pallidum:186

H3A648              	100.00%		D3B873              	100.00%
Bootstrap support for H3A648 as seed ortholog is 100%.
Bootstrap support for D3B873 as seed ortholog is 100%.

Group of orthologs #1453. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:186 P.pallidum:186

H3A6K1              	100.00%		D3B842              	100.00%
Bootstrap support for H3A6K1 as seed ortholog is 100%.
Bootstrap support for D3B842 as seed ortholog is 100%.

Group of orthologs #1454. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:186 P.pallidum:1

H3AL98              	100.00%		D3B3Q3              	100.00%
Bootstrap support for H3AL98 as seed ortholog is 100%.
Bootstrap support for D3B3Q3 as seed ortholog is 49%.
Alternative seed ortholog is D3AW80 (1 bits away from this cluster)

Group of orthologs #1455. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:186 P.pallidum:186

H3ARI4              	100.00%		D3B3B6              	100.00%
Bootstrap support for H3ARI4 as seed ortholog is 100%.
Bootstrap support for D3B3B6 as seed ortholog is 100%.

Group of orthologs #1456. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.pallidum:186

H3B131              	100.00%		D3AVW2              	100.00%
Bootstrap support for H3B131 as seed ortholog is 97%.
Bootstrap support for D3AVW2 as seed ortholog is 100%.

Group of orthologs #1457. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.pallidum:125

H3B6P2              	100.00%		D3AW79              	100.00%
Bootstrap support for H3B6P2 as seed ortholog is 99%.
Bootstrap support for D3AW79 as seed ortholog is 99%.

Group of orthologs #1458. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.pallidum:186

H3ABC3              	100.00%		D3BVK2              	100.00%
Bootstrap support for H3ABC3 as seed ortholog is 98%.
Bootstrap support for D3BVK2 as seed ortholog is 100%.

Group of orthologs #1459. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:186 P.pallidum:186

H3BEL0              	100.00%		D3BBP0              	100.00%
Bootstrap support for H3BEL0 as seed ortholog is 100%.
Bootstrap support for D3BBP0 as seed ortholog is 100%.

Group of orthologs #1460. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.pallidum:185

H3API5              	100.00%		D3BNA9              	100.00%
H3B2C2              	37.09%		D3BTR9              	28.48%
                    	       		D3BF54              	19.60%
                    	       		D3BEV2              	11.56%
                    	       		D3BEV3              	6.87%
Bootstrap support for H3API5 as seed ortholog is 98%.
Bootstrap support for D3BNA9 as seed ortholog is 100%.

Group of orthologs #1461. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:185 P.pallidum:185

H2ZW30              	100.00%		D3BSK1              	100.00%
H3BH60              	100.00%		
H3AN91              	37.69%		
Bootstrap support for H2ZW30 as seed ortholog is 100%.
Bootstrap support for H3BH60 as seed ortholog is 100%.
Bootstrap support for D3BSK1 as seed ortholog is 100%.

Group of orthologs #1462. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:185 P.pallidum:185

H3A733              	100.00%		D3B0W4              	100.00%
H3BDU3              	35.86%		
Bootstrap support for H3A733 as seed ortholog is 100%.
Bootstrap support for D3B0W4 as seed ortholog is 100%.

Group of orthologs #1463. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:41 P.pallidum:110

H3AZ16              	100.00%		D3BF44              	100.00%
H2ZXP0              	46.99%		
Bootstrap support for H3AZ16 as seed ortholog is 83%.
Bootstrap support for D3BF44 as seed ortholog is 99%.

Group of orthologs #1464. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:185 P.pallidum:185

M3XI75              	100.00%		D3B2E8              	100.00%
H3AIQ0              	10.16%		
Bootstrap support for M3XI75 as seed ortholog is 100%.
Bootstrap support for D3B2E8 as seed ortholog is 100%.

Group of orthologs #1465. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:185 P.pallidum:185

H3BFV2              	100.00%		D3B864              	100.00%
H3B584              	25.70%		
Bootstrap support for H3BFV2 as seed ortholog is 100%.
Bootstrap support for D3B864 as seed ortholog is 100%.

Group of orthologs #1466. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.pallidum:185

H2ZRM7              	100.00%		D3AXI5              	100.00%
Bootstrap support for H2ZRM7 as seed ortholog is 99%.
Bootstrap support for D3AXI5 as seed ortholog is 100%.

Group of orthologs #1467. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.pallidum:119

H3AQJ2              	100.00%		D3AYR4              	100.00%
Bootstrap support for H3AQJ2 as seed ortholog is 99%.
Bootstrap support for D3AYR4 as seed ortholog is 97%.

Group of orthologs #1468. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:185 P.pallidum:185

H3AXA9              	100.00%		D3B3A4              	100.00%
Bootstrap support for H3AXA9 as seed ortholog is 100%.
Bootstrap support for D3B3A4 as seed ortholog is 100%.

Group of orthologs #1469. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:185 P.pallidum:185

H3B205              	100.00%		D3BSM2              	100.00%
Bootstrap support for H3B205 as seed ortholog is 100%.
Bootstrap support for D3BSM2 as seed ortholog is 100%.

Group of orthologs #1470. Best score 184 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.pallidum:9

H3AA08              	100.00%		D3BL27              	100.00%
H3BEM9              	11.31%		
Bootstrap support for H3AA08 as seed ortholog is 99%.
Bootstrap support for D3BL27 as seed ortholog is 66%.
Alternative seed ortholog is D3BJU6 (9 bits away from this cluster)

Group of orthologs #1471. Best score 184 bits
Score difference with first non-orthologous sequence - L.chalumnae:184 P.pallidum:107

H3APN9              	100.00%		D3BI06              	100.00%
H3B6I1              	30.40%		
Bootstrap support for H3APN9 as seed ortholog is 100%.
Bootstrap support for D3BI06 as seed ortholog is 99%.

Group of orthologs #1472. Best score 184 bits
Score difference with first non-orthologous sequence - L.chalumnae:184 P.pallidum:184

H3AYS1              	100.00%		D3BS60              	100.00%
H2ZU08              	56.60%		
Bootstrap support for H3AYS1 as seed ortholog is 100%.
Bootstrap support for D3BS60 as seed ortholog is 100%.

Group of orthologs #1473. Best score 184 bits
Score difference with first non-orthologous sequence - L.chalumnae:184 P.pallidum:184

H3AXG8              	100.00%		D3BC02              	100.00%
Bootstrap support for H3AXG8 as seed ortholog is 100%.
Bootstrap support for D3BC02 as seed ortholog is 100%.

Group of orthologs #1474. Best score 184 bits
Score difference with first non-orthologous sequence - L.chalumnae:184 P.pallidum:184

H3B5K8              	100.00%		D3BU02              	100.00%
Bootstrap support for H3B5K8 as seed ortholog is 100%.
Bootstrap support for D3BU02 as seed ortholog is 100%.

Group of orthologs #1475. Best score 183 bits
Score difference with first non-orthologous sequence - L.chalumnae:183 P.pallidum:6

H3ASQ5              	100.00%		D3BB43              	100.00%
                    	       		D3BB55              	70.46%
                    	       		D3BJD4              	39.06%
                    	       		D3BJH4              	15.10%
                    	       		D3BCX6              	5.36%
Bootstrap support for H3ASQ5 as seed ortholog is 100%.
Bootstrap support for D3BB43 as seed ortholog is 52%.
Alternative seed ortholog is D3BJZ1 (6 bits away from this cluster)

Group of orthologs #1476. Best score 183 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 P.pallidum:183

H3AC41              	100.00%		D3BB09              	100.00%
H3BCW9              	36.97%		
Bootstrap support for H3AC41 as seed ortholog is 100%.
Bootstrap support for D3BB09 as seed ortholog is 100%.

Group of orthologs #1477. Best score 183 bits
Score difference with first non-orthologous sequence - L.chalumnae:183 P.pallidum:183

H3AUP4              	100.00%		D3BCE9              	100.00%
H3ANG1              	52.19%		
Bootstrap support for H3AUP4 as seed ortholog is 100%.
Bootstrap support for D3BCE9 as seed ortholog is 100%.

Group of orthologs #1478. Best score 183 bits
Score difference with first non-orthologous sequence - L.chalumnae:46 P.pallidum:50

H3AVR2              	100.00%		D3BEU9              	100.00%
H3BI91              	48.60%		
Bootstrap support for H3AVR2 as seed ortholog is 99%.
Bootstrap support for D3BEU9 as seed ortholog is 98%.

Group of orthologs #1479. Best score 183 bits
Score difference with first non-orthologous sequence - L.chalumnae:183 P.pallidum:183

H3BD74              	100.00%		D3BE09              	100.00%
H3AJT1              	31.07%		
Bootstrap support for H3BD74 as seed ortholog is 100%.
Bootstrap support for D3BE09 as seed ortholog is 100%.

Group of orthologs #1480. Best score 183 bits
Score difference with first non-orthologous sequence - L.chalumnae:183 P.pallidum:183

H2ZW41              	100.00%		D3AVQ0              	100.00%
Bootstrap support for H2ZW41 as seed ortholog is 100%.
Bootstrap support for D3AVQ0 as seed ortholog is 100%.

Group of orthologs #1481. Best score 183 bits
Score difference with first non-orthologous sequence - L.chalumnae:183 P.pallidum:183

H3A3X0              	100.00%		D3B6L1              	100.00%
Bootstrap support for H3A3X0 as seed ortholog is 100%.
Bootstrap support for D3B6L1 as seed ortholog is 100%.

Group of orthologs #1482. Best score 183 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 P.pallidum:183

H3ARR6              	100.00%		D3BJ34              	100.00%
Bootstrap support for H3ARR6 as seed ortholog is 99%.
Bootstrap support for D3BJ34 as seed ortholog is 100%.

Group of orthologs #1483. Best score 183 bits
Score difference with first non-orthologous sequence - L.chalumnae:183 P.pallidum:183

H3BIR1              	100.00%		D3B2Q4              	100.00%
Bootstrap support for H3BIR1 as seed ortholog is 100%.
Bootstrap support for D3B2Q4 as seed ortholog is 100%.

Group of orthologs #1484. Best score 183 bits
Score difference with first non-orthologous sequence - L.chalumnae:183 P.pallidum:183

H3BEB6              	100.00%		D3B6N6              	100.00%
Bootstrap support for H3BEB6 as seed ortholog is 100%.
Bootstrap support for D3B6N6 as seed ortholog is 100%.

Group of orthologs #1485. Best score 182 bits
Score difference with first non-orthologous sequence - L.chalumnae:40 P.pallidum:34

H3A7S0              	100.00%		D3B9Q5              	100.00%
                    	       		D3B9Q6              	36.69%
                    	       		D3BE24              	15.77%
Bootstrap support for H3A7S0 as seed ortholog is 91%.
Bootstrap support for D3B9Q5 as seed ortholog is 81%.

Group of orthologs #1486. Best score 182 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.pallidum:66

H3ARJ2              	100.00%		D3B2M5              	100.00%
H3BBT9              	44.75%		
Bootstrap support for H3ARJ2 as seed ortholog is 99%.
Bootstrap support for D3B2M5 as seed ortholog is 99%.

Group of orthologs #1487. Best score 182 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.pallidum:182

H3A7T4              	100.00%		D3BGC7              	100.00%
Bootstrap support for H3A7T4 as seed ortholog is 99%.
Bootstrap support for D3BGC7 as seed ortholog is 100%.

Group of orthologs #1488. Best score 182 bits
Score difference with first non-orthologous sequence - L.chalumnae:182 P.pallidum:182

H3AXG4              	100.00%		D3AWI1              	100.00%
Bootstrap support for H3AXG4 as seed ortholog is 100%.
Bootstrap support for D3AWI1 as seed ortholog is 100%.

Group of orthologs #1489. Best score 182 bits
Score difference with first non-orthologous sequence - L.chalumnae:182 P.pallidum:182

H3AMA5              	100.00%		D3B7C4              	100.00%
Bootstrap support for H3AMA5 as seed ortholog is 100%.
Bootstrap support for D3B7C4 as seed ortholog is 100%.

Group of orthologs #1490. Best score 182 bits
Score difference with first non-orthologous sequence - L.chalumnae:182 P.pallidum:182

H3ASE1              	100.00%		D3BHL7              	100.00%
Bootstrap support for H3ASE1 as seed ortholog is 100%.
Bootstrap support for D3BHL7 as seed ortholog is 100%.

Group of orthologs #1491. Best score 182 bits
Score difference with first non-orthologous sequence - L.chalumnae:182 P.pallidum:182

H3B1N7              	100.00%		D3BGG2              	100.00%
Bootstrap support for H3B1N7 as seed ortholog is 100%.
Bootstrap support for D3BGG2 as seed ortholog is 100%.

Group of orthologs #1492. Best score 182 bits
Score difference with first non-orthologous sequence - L.chalumnae:182 P.pallidum:182

H3BI47              	100.00%		D3BNT2              	100.00%
Bootstrap support for H3BI47 as seed ortholog is 100%.
Bootstrap support for D3BNT2 as seed ortholog is 100%.

Group of orthologs #1493. Best score 181 bits
Score difference with first non-orthologous sequence - L.chalumnae:181 P.pallidum:181

H3BDJ7              	100.00%		D3AY46              	100.00%
                    	       		D3B2R8              	8.62%
Bootstrap support for H3BDJ7 as seed ortholog is 100%.
Bootstrap support for D3AY46 as seed ortholog is 100%.

Group of orthologs #1494. Best score 181 bits
Score difference with first non-orthologous sequence - L.chalumnae:181 P.pallidum:181

H3AFZ7              	100.00%		D3BAT0              	100.00%
Bootstrap support for H3AFZ7 as seed ortholog is 100%.
Bootstrap support for D3BAT0 as seed ortholog is 100%.

Group of orthologs #1495. Best score 181 bits
Score difference with first non-orthologous sequence - L.chalumnae:181 P.pallidum:181

H3AHU6              	100.00%		D3BNU1              	100.00%
Bootstrap support for H3AHU6 as seed ortholog is 100%.
Bootstrap support for D3BNU1 as seed ortholog is 100%.

Group of orthologs #1496. Best score 180 bits
Score difference with first non-orthologous sequence - L.chalumnae:180 P.pallidum:180

H3ALF1              	100.00%		D3AZZ0              	100.00%
H3BCQ9              	32.83%		
H3BCK5              	31.79%		
H3ATI9              	20.12%		
Bootstrap support for H3ALF1 as seed ortholog is 100%.
Bootstrap support for D3AZZ0 as seed ortholog is 100%.

Group of orthologs #1497. Best score 180 bits
Score difference with first non-orthologous sequence - L.chalumnae:180 P.pallidum:180

H3AUB8              	100.00%		D3B4P8              	100.00%
H3AIT2              	32.07%		
Bootstrap support for H3AUB8 as seed ortholog is 100%.
Bootstrap support for D3B4P8 as seed ortholog is 100%.

Group of orthologs #1498. Best score 180 bits
Score difference with first non-orthologous sequence - L.chalumnae:180 P.pallidum:180

H3A469              	100.00%		D3AZ47              	100.00%
Bootstrap support for H3A469 as seed ortholog is 100%.
Bootstrap support for D3AZ47 as seed ortholog is 100%.

Group of orthologs #1499. Best score 180 bits
Score difference with first non-orthologous sequence - L.chalumnae:180 P.pallidum:118

H3A7W2              	100.00%		D3B7S7              	100.00%
Bootstrap support for H3A7W2 as seed ortholog is 100%.
Bootstrap support for D3B7S7 as seed ortholog is 99%.

Group of orthologs #1500. Best score 180 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 P.pallidum:180

H2ZWD9              	100.00%		D3BK97              	100.00%
Bootstrap support for H2ZWD9 as seed ortholog is 96%.
Bootstrap support for D3BK97 as seed ortholog is 100%.

Group of orthologs #1501. Best score 180 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 P.pallidum:76

H3B665              	100.00%		D3BBA4              	100.00%
Bootstrap support for H3B665 as seed ortholog is 96%.
Bootstrap support for D3BBA4 as seed ortholog is 98%.

Group of orthologs #1502. Best score 180 bits
Score difference with first non-orthologous sequence - L.chalumnae:180 P.pallidum:180

H3BAJ8              	100.00%		D3BAW8              	100.00%
Bootstrap support for H3BAJ8 as seed ortholog is 100%.
Bootstrap support for D3BAW8 as seed ortholog is 100%.

Group of orthologs #1503. Best score 180 bits
Score difference with first non-orthologous sequence - L.chalumnae:6 P.pallidum:57

H3BCW4              	100.00%		D3BB93              	100.00%
Bootstrap support for H3BCW4 as seed ortholog is 57%.
Alternative seed ortholog is H3B1A6 (6 bits away from this cluster)
Bootstrap support for D3BB93 as seed ortholog is 98%.

Group of orthologs #1504. Best score 180 bits
Score difference with first non-orthologous sequence - L.chalumnae:180 P.pallidum:180

H3BDW3              	100.00%		D3BM56              	100.00%
Bootstrap support for H3BDW3 as seed ortholog is 100%.
Bootstrap support for D3BM56 as seed ortholog is 100%.

Group of orthologs #1505. Best score 179 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 P.pallidum:111

H3ACA0              	100.00%		D3B7V5              	100.00%
H3BH84              	49.73%		
Bootstrap support for H3ACA0 as seed ortholog is 99%.
Bootstrap support for D3B7V5 as seed ortholog is 99%.

Group of orthologs #1506. Best score 179 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.pallidum:179

H2ZUA3              	100.00%		D3B6T4              	100.00%
Bootstrap support for H2ZUA3 as seed ortholog is 99%.
Bootstrap support for D3B6T4 as seed ortholog is 100%.

Group of orthologs #1507. Best score 179 bits
Score difference with first non-orthologous sequence - L.chalumnae:179 P.pallidum:179

H2ZWP0              	100.00%		D3B595              	100.00%
Bootstrap support for H2ZWP0 as seed ortholog is 100%.
Bootstrap support for D3B595 as seed ortholog is 100%.

Group of orthologs #1508. Best score 179 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.pallidum:179

H3AJ99              	100.00%		D3BHC6              	100.00%
Bootstrap support for H3AJ99 as seed ortholog is 99%.
Bootstrap support for D3BHC6 as seed ortholog is 100%.

Group of orthologs #1509. Best score 179 bits
Score difference with first non-orthologous sequence - L.chalumnae:179 P.pallidum:179

H3AEZ7              	100.00%		D3BKX3              	100.00%
Bootstrap support for H3AEZ7 as seed ortholog is 100%.
Bootstrap support for D3BKX3 as seed ortholog is 100%.

Group of orthologs #1510. Best score 179 bits
Score difference with first non-orthologous sequence - L.chalumnae:179 P.pallidum:179

H3B9L8              	100.00%		D3B2C1              	100.00%
Bootstrap support for H3B9L8 as seed ortholog is 100%.
Bootstrap support for D3B2C1 as seed ortholog is 100%.

Group of orthologs #1511. Best score 179 bits
Score difference with first non-orthologous sequence - L.chalumnae:179 P.pallidum:179

H3BAR7              	100.00%		D3BAR1              	100.00%
Bootstrap support for H3BAR7 as seed ortholog is 100%.
Bootstrap support for D3BAR1 as seed ortholog is 100%.

Group of orthologs #1512. Best score 179 bits
Score difference with first non-orthologous sequence - L.chalumnae:179 P.pallidum:179

H3B9D1              	100.00%		D3BRH9              	100.00%
Bootstrap support for H3B9D1 as seed ortholog is 100%.
Bootstrap support for D3BRH9 as seed ortholog is 100%.

Group of orthologs #1513. Best score 178 bits
Score difference with first non-orthologous sequence - L.chalumnae:178 P.pallidum:178

M3XJM6              	100.00%		D3AWE4              	100.00%
H3ASY6              	68.44%		
H3AWM4              	33.86%		
Bootstrap support for M3XJM6 as seed ortholog is 100%.
Bootstrap support for D3AWE4 as seed ortholog is 100%.

Group of orthologs #1514. Best score 178 bits
Score difference with first non-orthologous sequence - L.chalumnae:178 P.pallidum:178

H3B8U2              	100.00%		D3BTZ9              	100.00%
H2ZWI7              	25.49%		
H3AL88              	19.89%		
Bootstrap support for H3B8U2 as seed ortholog is 100%.
Bootstrap support for D3BTZ9 as seed ortholog is 100%.

Group of orthologs #1515. Best score 178 bits
Score difference with first non-orthologous sequence - L.chalumnae:117 P.pallidum:178

H2ZSF2              	100.00%		D3B0F6              	100.00%
Bootstrap support for H2ZSF2 as seed ortholog is 99%.
Bootstrap support for D3B0F6 as seed ortholog is 100%.

Group of orthologs #1516. Best score 178 bits
Score difference with first non-orthologous sequence - L.chalumnae:178 P.pallidum:2

H2ZUL1              	100.00%		D3BCZ3              	100.00%
Bootstrap support for H2ZUL1 as seed ortholog is 100%.
Bootstrap support for D3BCZ3 as seed ortholog is 53%.
Alternative seed ortholog is D3B6C3 (2 bits away from this cluster)

Group of orthologs #1517. Best score 178 bits
Score difference with first non-orthologous sequence - L.chalumnae:178 P.pallidum:178

H3AHG9              	100.00%		D3B4H4              	100.00%
Bootstrap support for H3AHG9 as seed ortholog is 100%.
Bootstrap support for D3B4H4 as seed ortholog is 100%.

Group of orthologs #1518. Best score 178 bits
Score difference with first non-orthologous sequence - L.chalumnae:178 P.pallidum:178

H3ATS7              	100.00%		D3BAL0              	100.00%
Bootstrap support for H3ATS7 as seed ortholog is 100%.
Bootstrap support for D3BAL0 as seed ortholog is 100%.

Group of orthologs #1519. Best score 178 bits
Score difference with first non-orthologous sequence - L.chalumnae:178 P.pallidum:178

H3B7G8              	100.00%		D3BEW0              	100.00%
Bootstrap support for H3B7G8 as seed ortholog is 100%.
Bootstrap support for D3BEW0 as seed ortholog is 100%.

Group of orthologs #1520. Best score 178 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.pallidum:94

H3AWP7              	100.00%		D3BPE3              	100.00%
Bootstrap support for H3AWP7 as seed ortholog is 100%.
Bootstrap support for D3BPE3 as seed ortholog is 99%.

Group of orthologs #1521. Best score 177 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.pallidum:177

H3A3L2              	100.00%		D3BDS6              	100.00%
H3AHE8              	31.90%		D3AZB3              	10.58%
Bootstrap support for H3A3L2 as seed ortholog is 88%.
Bootstrap support for D3BDS6 as seed ortholog is 100%.

Group of orthologs #1522. Best score 177 bits
Score difference with first non-orthologous sequence - L.chalumnae:36 P.pallidum:177

H3AB13              	100.00%		D3B0P9              	100.00%
Bootstrap support for H3AB13 as seed ortholog is 82%.
Bootstrap support for D3B0P9 as seed ortholog is 100%.

Group of orthologs #1523. Best score 177 bits
Score difference with first non-orthologous sequence - L.chalumnae:177 P.pallidum:177

H3AU64              	100.00%		D3AYA4              	100.00%
Bootstrap support for H3AU64 as seed ortholog is 100%.
Bootstrap support for D3AYA4 as seed ortholog is 100%.

Group of orthologs #1524. Best score 177 bits
Score difference with first non-orthologous sequence - L.chalumnae:177 P.pallidum:74

H3ABM9              	100.00%		D3BDR5              	100.00%
Bootstrap support for H3ABM9 as seed ortholog is 100%.
Bootstrap support for D3BDR5 as seed ortholog is 99%.

Group of orthologs #1525. Best score 177 bits
Score difference with first non-orthologous sequence - L.chalumnae:177 P.pallidum:177

H3A3Z4              	100.00%		D3BKE4              	100.00%
Bootstrap support for H3A3Z4 as seed ortholog is 100%.
Bootstrap support for D3BKE4 as seed ortholog is 100%.

Group of orthologs #1526. Best score 177 bits
Score difference with first non-orthologous sequence - L.chalumnae:177 P.pallidum:177

H3AB58              	100.00%		D3BF47              	100.00%
Bootstrap support for H3AB58 as seed ortholog is 100%.
Bootstrap support for D3BF47 as seed ortholog is 100%.

Group of orthologs #1527. Best score 177 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.pallidum:177

H2ZZ46              	100.00%		D3BS34              	100.00%
Bootstrap support for H2ZZ46 as seed ortholog is 99%.
Bootstrap support for D3BS34 as seed ortholog is 100%.

Group of orthologs #1528. Best score 177 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.pallidum:177

H3AMG3              	100.00%		D3BCL8              	100.00%
Bootstrap support for H3AMG3 as seed ortholog is 99%.
Bootstrap support for D3BCL8 as seed ortholog is 100%.

Group of orthologs #1529. Best score 177 bits
Score difference with first non-orthologous sequence - L.chalumnae:177 P.pallidum:177

H3AL26              	100.00%		D3BQV3              	100.00%
Bootstrap support for H3AL26 as seed ortholog is 100%.
Bootstrap support for D3BQV3 as seed ortholog is 100%.

Group of orthologs #1530. Best score 177 bits
Score difference with first non-orthologous sequence - L.chalumnae:177 P.pallidum:177

M3XI18              	100.00%		D3B9C0              	100.00%
Bootstrap support for M3XI18 as seed ortholog is 100%.
Bootstrap support for D3B9C0 as seed ortholog is 100%.

Group of orthologs #1531. Best score 176 bits
Score difference with first non-orthologous sequence - L.chalumnae:176 P.pallidum:176

H3AHV6              	100.00%		D3B4X6              	100.00%
H3AN43              	20.00%		
Bootstrap support for H3AHV6 as seed ortholog is 100%.
Bootstrap support for D3B4X6 as seed ortholog is 100%.

Group of orthologs #1532. Best score 176 bits
Score difference with first non-orthologous sequence - L.chalumnae:176 P.pallidum:176

H3AF51              	100.00%		D3BLY0              	100.00%
H3BAV6              	33.82%		
Bootstrap support for H3AF51 as seed ortholog is 100%.
Bootstrap support for D3BLY0 as seed ortholog is 100%.

Group of orthologs #1533. Best score 176 bits
Score difference with first non-orthologous sequence - L.chalumnae:176 P.pallidum:176

H3BGD2              	100.00%		D3BQZ1              	100.00%
H3A825              	63.58%		
Bootstrap support for H3BGD2 as seed ortholog is 100%.
Bootstrap support for D3BQZ1 as seed ortholog is 100%.

Group of orthologs #1534. Best score 176 bits
Score difference with first non-orthologous sequence - L.chalumnae:176 P.pallidum:176

H3AAG8              	100.00%		D3B7I6              	100.00%
Bootstrap support for H3AAG8 as seed ortholog is 100%.
Bootstrap support for D3B7I6 as seed ortholog is 100%.

Group of orthologs #1535. Best score 176 bits
Score difference with first non-orthologous sequence - L.chalumnae:176 P.pallidum:176

H2ZSJ7              	100.00%		D3BPW1              	100.00%
Bootstrap support for H2ZSJ7 as seed ortholog is 100%.
Bootstrap support for D3BPW1 as seed ortholog is 100%.

Group of orthologs #1536. Best score 176 bits
Score difference with first non-orthologous sequence - L.chalumnae:176 P.pallidum:176

H3A885              	100.00%		D3BCA2              	100.00%
Bootstrap support for H3A885 as seed ortholog is 100%.
Bootstrap support for D3BCA2 as seed ortholog is 100%.

Group of orthologs #1537. Best score 176 bits
Score difference with first non-orthologous sequence - L.chalumnae:20 P.pallidum:42

H3A9G7              	100.00%		D3BPQ9              	100.00%
Bootstrap support for H3A9G7 as seed ortholog is 75%.
Bootstrap support for D3BPQ9 as seed ortholog is 78%.

Group of orthologs #1538. Best score 176 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.pallidum:176

H3AQI2              	100.00%		D3BEC4              	100.00%
Bootstrap support for H3AQI2 as seed ortholog is 100%.
Bootstrap support for D3BEC4 as seed ortholog is 100%.

Group of orthologs #1539. Best score 176 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 P.pallidum:176

H3ARW6              	100.00%		D3BEZ0              	100.00%
Bootstrap support for H3ARW6 as seed ortholog is 99%.
Bootstrap support for D3BEZ0 as seed ortholog is 100%.

Group of orthologs #1540. Best score 176 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 P.pallidum:176

H3B7C2              	100.00%		D3BAB7              	100.00%
Bootstrap support for H3B7C2 as seed ortholog is 100%.
Bootstrap support for D3BAB7 as seed ortholog is 100%.

Group of orthologs #1541. Best score 176 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.pallidum:176

H3B7W0              	100.00%		D3BRK2              	100.00%
Bootstrap support for H3B7W0 as seed ortholog is 99%.
Bootstrap support for D3BRK2 as seed ortholog is 100%.

Group of orthologs #1542. Best score 175 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.pallidum:27

H3ANF6              	100.00%		D3B2B5              	100.00%
                    	       		D3B860              	14.38%
Bootstrap support for H3ANF6 as seed ortholog is 95%.
Bootstrap support for D3B2B5 as seed ortholog is 70%.
Alternative seed ortholog is D3AXI9 (27 bits away from this cluster)

Group of orthologs #1543. Best score 175 bits
Score difference with first non-orthologous sequence - L.chalumnae:175 P.pallidum:175

H3ABR3              	100.00%		D3B4U1              	100.00%
Bootstrap support for H3ABR3 as seed ortholog is 100%.
Bootstrap support for D3B4U1 as seed ortholog is 100%.

Group of orthologs #1544. Best score 175 bits
Score difference with first non-orthologous sequence - L.chalumnae:175 P.pallidum:175

H3A946              	100.00%		D3BPS7              	100.00%
Bootstrap support for H3A946 as seed ortholog is 100%.
Bootstrap support for D3BPS7 as seed ortholog is 100%.

Group of orthologs #1545. Best score 175 bits
Score difference with first non-orthologous sequence - L.chalumnae:175 P.pallidum:175

H3B7N5              	100.00%		D3AYT9              	100.00%
Bootstrap support for H3B7N5 as seed ortholog is 100%.
Bootstrap support for D3AYT9 as seed ortholog is 100%.

Group of orthologs #1546. Best score 175 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 P.pallidum:175

H3B8Y0              	100.00%		D3BAH6              	100.00%
Bootstrap support for H3B8Y0 as seed ortholog is 100%.
Bootstrap support for D3BAH6 as seed ortholog is 100%.

Group of orthologs #1547. Best score 175 bits
Score difference with first non-orthologous sequence - L.chalumnae:175 P.pallidum:175

H3APK5              	100.00%		D3BUF1              	100.00%
Bootstrap support for H3APK5 as seed ortholog is 100%.
Bootstrap support for D3BUF1 as seed ortholog is 100%.

Group of orthologs #1548. Best score 174 bits
Score difference with first non-orthologous sequence - L.chalumnae:174 P.pallidum:174

H3B840              	100.00%		D3BDZ0              	100.00%
H3AGS7              	34.68%		
H2ZWX7              	33.11%		
Bootstrap support for H3B840 as seed ortholog is 100%.
Bootstrap support for D3BDZ0 as seed ortholog is 100%.

Group of orthologs #1549. Best score 174 bits
Score difference with first non-orthologous sequence - L.chalumnae:174 P.pallidum:174

M3XJM0              	100.00%		D3BBH9              	100.00%
                    	       		D3AZZ2              	14.78%
Bootstrap support for M3XJM0 as seed ortholog is 100%.
Bootstrap support for D3BBH9 as seed ortholog is 100%.

Group of orthologs #1550. Best score 174 bits
Score difference with first non-orthologous sequence - L.chalumnae:174 P.pallidum:174

H3ATB1              	100.00%		D3BHC4              	100.00%
Bootstrap support for H3ATB1 as seed ortholog is 100%.
Bootstrap support for D3BHC4 as seed ortholog is 100%.

Group of orthologs #1551. Best score 174 bits
Score difference with first non-orthologous sequence - L.chalumnae:174 P.pallidum:174

H3BAT4              	100.00%		D3BB69              	100.00%
Bootstrap support for H3BAT4 as seed ortholog is 100%.
Bootstrap support for D3BB69 as seed ortholog is 100%.

Group of orthologs #1552. Best score 174 bits
Score difference with first non-orthologous sequence - L.chalumnae:174 P.pallidum:174

H3B6Y8              	100.00%		D3BHJ3              	100.00%
Bootstrap support for H3B6Y8 as seed ortholog is 100%.
Bootstrap support for D3BHJ3 as seed ortholog is 100%.

Group of orthologs #1553. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:173 P.pallidum:173

H3A9G5              	100.00%		D3B784              	100.00%
H3B423              	8.10%		D3B798              	82.44%
                    	       		D3BJX6              	31.06%
                    	       		D3BP34              	26.62%
                    	       		D3BH60              	24.34%
                    	       		D3BP30              	22.42%
                    	       		D3BP27              	11.53%
                    	       		D3B1Z7              	7.00%
                    	       		D3BRV3              	6.72%
                    	       		D3BRE2              	6.66%
                    	       		D3BRU5              	6.50%
Bootstrap support for H3A9G5 as seed ortholog is 100%.
Bootstrap support for D3B784 as seed ortholog is 100%.

Group of orthologs #1554. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.pallidum:173

M3XGN9              	100.00%		D3BUM7              	100.00%
H3AHL1              	33.46%		
H3ACL1              	16.92%		
H3A1X3              	16.82%		
Bootstrap support for M3XGN9 as seed ortholog is 99%.
Bootstrap support for D3BUM7 as seed ortholog is 100%.

Group of orthologs #1555. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:173 P.pallidum:173

H3A8Q7              	100.00%		D3BUH1              	100.00%
H3AQX2              	31.26%		
Bootstrap support for H3A8Q7 as seed ortholog is 100%.
Bootstrap support for D3BUH1 as seed ortholog is 100%.

Group of orthologs #1556. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:173 P.pallidum:173

H3A3H1              	100.00%		D3AXK1              	100.00%
Bootstrap support for H3A3H1 as seed ortholog is 100%.
Bootstrap support for D3AXK1 as seed ortholog is 100%.

Group of orthologs #1557. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:173 P.pallidum:173

H3AAY2              	100.00%		D3AZD5              	100.00%
Bootstrap support for H3AAY2 as seed ortholog is 100%.
Bootstrap support for D3AZD5 as seed ortholog is 100%.

Group of orthologs #1558. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:173 P.pallidum:173

H3AB38              	100.00%		D3BLJ3              	100.00%
Bootstrap support for H3AB38 as seed ortholog is 100%.
Bootstrap support for D3BLJ3 as seed ortholog is 100%.

Group of orthologs #1559. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:173 P.pallidum:173

H3A8T2              	100.00%		D3BPP9              	100.00%
Bootstrap support for H3A8T2 as seed ortholog is 100%.
Bootstrap support for D3BPP9 as seed ortholog is 100%.

Group of orthologs #1560. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:173 P.pallidum:173

H3ALW7              	100.00%		D3BNC7              	100.00%
Bootstrap support for H3ALW7 as seed ortholog is 100%.
Bootstrap support for D3BNC7 as seed ortholog is 100%.

Group of orthologs #1561. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:173 P.pallidum:173

H3AGG8              	100.00%		D3BU91              	100.00%
Bootstrap support for H3AGG8 as seed ortholog is 100%.
Bootstrap support for D3BU91 as seed ortholog is 100%.

Group of orthologs #1562. Best score 172 bits
Score difference with first non-orthologous sequence - L.chalumnae:11 P.pallidum:32

H3ASN1              	100.00%		D3BAI5              	100.00%
H3B5D6              	7.14%		
Bootstrap support for H3ASN1 as seed ortholog is 64%.
Alternative seed ortholog is H3AMW2 (11 bits away from this cluster)
Bootstrap support for D3BAI5 as seed ortholog is 87%.

Group of orthologs #1563. Best score 172 bits
Score difference with first non-orthologous sequence - L.chalumnae:172 P.pallidum:172

H3AAJ6              	100.00%		D3B1C8              	100.00%
Bootstrap support for H3AAJ6 as seed ortholog is 100%.
Bootstrap support for D3B1C8 as seed ortholog is 100%.

Group of orthologs #1564. Best score 172 bits
Score difference with first non-orthologous sequence - L.chalumnae:172 P.pallidum:172

H3AV23              	100.00%		D3AVZ9              	100.00%
Bootstrap support for H3AV23 as seed ortholog is 100%.
Bootstrap support for D3AVZ9 as seed ortholog is 100%.

Group of orthologs #1565. Best score 172 bits
Score difference with first non-orthologous sequence - L.chalumnae:172 P.pallidum:172

H3AKR8              	100.00%		D3BCJ3              	100.00%
Bootstrap support for H3AKR8 as seed ortholog is 100%.
Bootstrap support for D3BCJ3 as seed ortholog is 100%.

Group of orthologs #1566. Best score 172 bits
Score difference with first non-orthologous sequence - L.chalumnae:172 P.pallidum:172

H3B096              	100.00%		D3BJ52              	100.00%
Bootstrap support for H3B096 as seed ortholog is 100%.
Bootstrap support for D3BJ52 as seed ortholog is 100%.

Group of orthologs #1567. Best score 172 bits
Score difference with first non-orthologous sequence - L.chalumnae:172 P.pallidum:172

H3B6U6              	100.00%		D3BHP3              	100.00%
Bootstrap support for H3B6U6 as seed ortholog is 100%.
Bootstrap support for D3BHP3 as seed ortholog is 100%.

Group of orthologs #1568. Best score 172 bits
Score difference with first non-orthologous sequence - L.chalumnae:172 P.pallidum:172

H3BIL1              	100.00%		D3BBS0              	100.00%
Bootstrap support for H3BIL1 as seed ortholog is 100%.
Bootstrap support for D3BBS0 as seed ortholog is 100%.

Group of orthologs #1569. Best score 172 bits
Score difference with first non-orthologous sequence - L.chalumnae:172 P.pallidum:172

H3BBG8              	100.00%		D3BLG3              	100.00%
Bootstrap support for H3BBG8 as seed ortholog is 100%.
Bootstrap support for D3BLG3 as seed ortholog is 100%.

Group of orthologs #1570. Best score 171 bits
Score difference with first non-orthologous sequence - L.chalumnae:171 P.pallidum:171

H3ACW3              	100.00%		D3BD72              	100.00%
H2ZY92              	65.24%		
H3APQ7              	63.88%		
Bootstrap support for H3ACW3 as seed ortholog is 100%.
Bootstrap support for D3BD72 as seed ortholog is 100%.

Group of orthologs #1571. Best score 171 bits
Score difference with first non-orthologous sequence - L.chalumnae:171 P.pallidum:171

H3AUR6              	100.00%		D3AZQ9              	100.00%
H3B0D9              	8.23%		
Bootstrap support for H3AUR6 as seed ortholog is 100%.
Bootstrap support for D3AZQ9 as seed ortholog is 100%.

Group of orthologs #1572. Best score 171 bits
Score difference with first non-orthologous sequence - L.chalumnae:171 P.pallidum:112

H3AS23              	100.00%		D3BEP6              	100.00%
H3BA85              	48.16%		
Bootstrap support for H3AS23 as seed ortholog is 100%.
Bootstrap support for D3BEP6 as seed ortholog is 99%.

Group of orthologs #1573. Best score 171 bits
Score difference with first non-orthologous sequence - L.chalumnae:171 P.pallidum:171

H3AFF2              	100.00%		D3B052              	100.00%
Bootstrap support for H3AFF2 as seed ortholog is 100%.
Bootstrap support for D3B052 as seed ortholog is 100%.

Group of orthologs #1574. Best score 171 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.pallidum:171

H3B2X4              	100.00%		D3BN10              	100.00%
Bootstrap support for H3B2X4 as seed ortholog is 99%.
Bootstrap support for D3BN10 as seed ortholog is 100%.

Group of orthologs #1575. Best score 171 bits
Score difference with first non-orthologous sequence - L.chalumnae:171 P.pallidum:80

H3B3L5              	100.00%		D3BTE5              	100.00%
Bootstrap support for H3B3L5 as seed ortholog is 100%.
Bootstrap support for D3BTE5 as seed ortholog is 97%.

Group of orthologs #1576. Best score 170 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 P.pallidum:86

H3A2X5              	100.00%		D3BT30              	100.00%
H2ZV00              	24.39%		D3BPU7              	11.30%
H2ZWU7              	5.25%		
Bootstrap support for H3A2X5 as seed ortholog is 96%.
Bootstrap support for D3BT30 as seed ortholog is 99%.

Group of orthologs #1577. Best score 170 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 P.pallidum:170

H3AV13              	100.00%		D3BL22              	100.00%
H2ZW63              	66.45%		
H3BE56              	60.13%		
Bootstrap support for H3AV13 as seed ortholog is 88%.
Bootstrap support for D3BL22 as seed ortholog is 100%.

Group of orthologs #1578. Best score 170 bits
Score difference with first non-orthologous sequence - L.chalumnae:170 P.pallidum:170

H3AXZ5              	100.00%		D3BG82              	100.00%
H3B1Q9              	38.05%		
Bootstrap support for H3AXZ5 as seed ortholog is 100%.
Bootstrap support for D3BG82 as seed ortholog is 100%.

Group of orthologs #1579. Best score 170 bits
Score difference with first non-orthologous sequence - L.chalumnae:170 P.pallidum:170

H3B5I3              	100.00%		D3BS32              	100.00%
H3AA66              	32.93%		
Bootstrap support for H3B5I3 as seed ortholog is 100%.
Bootstrap support for D3BS32 as seed ortholog is 100%.

Group of orthologs #1580. Best score 170 bits
Score difference with first non-orthologous sequence - L.chalumnae:170 P.pallidum:170

H3AL78              	100.00%		D3BHA1              	100.00%
Bootstrap support for H3AL78 as seed ortholog is 100%.
Bootstrap support for D3BHA1 as seed ortholog is 100%.

Group of orthologs #1581. Best score 170 bits
Score difference with first non-orthologous sequence - L.chalumnae:170 P.pallidum:170

H3AAY7              	100.00%		D3BR47              	100.00%
Bootstrap support for H3AAY7 as seed ortholog is 100%.
Bootstrap support for D3BR47 as seed ortholog is 100%.

Group of orthologs #1582. Best score 170 bits
Score difference with first non-orthologous sequence - L.chalumnae:170 P.pallidum:170

H3AI56              	100.00%		D3BMM7              	100.00%
Bootstrap support for H3AI56 as seed ortholog is 100%.
Bootstrap support for D3BMM7 as seed ortholog is 100%.

Group of orthologs #1583. Best score 170 bits
Score difference with first non-orthologous sequence - L.chalumnae:170 P.pallidum:170

H3AQY0              	100.00%		D3BHF9              	100.00%
Bootstrap support for H3AQY0 as seed ortholog is 100%.
Bootstrap support for D3BHF9 as seed ortholog is 100%.

Group of orthologs #1584. Best score 170 bits
Score difference with first non-orthologous sequence - L.chalumnae:170 P.pallidum:170

H3ARF8              	100.00%		D3BK19              	100.00%
Bootstrap support for H3ARF8 as seed ortholog is 100%.
Bootstrap support for D3BK19 as seed ortholog is 100%.

Group of orthologs #1585. Best score 170 bits
Score difference with first non-orthologous sequence - L.chalumnae:170 P.pallidum:59

H3B128              	100.00%		D3BPQ3              	100.00%
Bootstrap support for H3B128 as seed ortholog is 100%.
Bootstrap support for D3BPQ3 as seed ortholog is 95%.

Group of orthologs #1586. Best score 170 bits
Score difference with first non-orthologous sequence - L.chalumnae:170 P.pallidum:170

H3B0T9              	100.00%		D3BU92              	100.00%
Bootstrap support for H3B0T9 as seed ortholog is 100%.
Bootstrap support for D3BU92 as seed ortholog is 100%.

Group of orthologs #1587. Best score 169 bits
Score difference with first non-orthologous sequence - L.chalumnae:169 P.pallidum:58

H3BDL2              	100.00%		D3BRK3              	100.00%
                    	       		D3B6U1              	24.14%
                    	       		D3BNI1              	22.55%
                    	       		D3BJ35              	21.22%
                    	       		D3B5R7              	20.16%
                    	       		D3BNV5              	19.10%
                    	       		D3BNQ0              	18.97%
Bootstrap support for H3BDL2 as seed ortholog is 100%.
Bootstrap support for D3BRK3 as seed ortholog is 84%.

Group of orthologs #1588. Best score 169 bits
Score difference with first non-orthologous sequence - L.chalumnae:169 P.pallidum:169

H3AMM3              	100.00%		D3AVR2              	100.00%
H2ZWT0              	16.48%		
Bootstrap support for H3AMM3 as seed ortholog is 100%.
Bootstrap support for D3AVR2 as seed ortholog is 100%.

Group of orthologs #1589. Best score 169 bits
Score difference with first non-orthologous sequence - L.chalumnae:169 P.pallidum:169

M3XHU7              	100.00%		D3BUD8              	100.00%
H3AYY5              	47.72%		
Bootstrap support for M3XHU7 as seed ortholog is 100%.
Bootstrap support for D3BUD8 as seed ortholog is 100%.

Group of orthologs #1590. Best score 169 bits
Score difference with first non-orthologous sequence - L.chalumnae:169 P.pallidum:169

H3ADZ8              	100.00%		D3AVT0              	100.00%
Bootstrap support for H3ADZ8 as seed ortholog is 100%.
Bootstrap support for D3AVT0 as seed ortholog is 100%.

Group of orthologs #1591. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 P.pallidum:168

H2ZWW0              	100.00%		D3BGU0              	100.00%
H3A0Y5              	75.42%		
Bootstrap support for H2ZWW0 as seed ortholog is 100%.
Bootstrap support for D3BGU0 as seed ortholog is 100%.

Group of orthologs #1592. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.pallidum:168

H3BHK9              	100.00%		D3BNE2              	100.00%
M3XL68              	40.29%		
Bootstrap support for H3BHK9 as seed ortholog is 99%.
Bootstrap support for D3BNE2 as seed ortholog is 100%.

Group of orthologs #1593. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 P.pallidum:168

H3AMK4              	100.00%		D3B437              	100.00%
Bootstrap support for H3AMK4 as seed ortholog is 100%.
Bootstrap support for D3B437 as seed ortholog is 100%.

Group of orthologs #1594. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 P.pallidum:168

H3ABP8              	100.00%		D3BIE2              	100.00%
Bootstrap support for H3ABP8 as seed ortholog is 100%.
Bootstrap support for D3BIE2 as seed ortholog is 100%.

Group of orthologs #1595. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 P.pallidum:168

H3B3W3              	100.00%		D3AW88              	100.00%
Bootstrap support for H3B3W3 as seed ortholog is 100%.
Bootstrap support for D3AW88 as seed ortholog is 100%.

Group of orthologs #1596. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 P.pallidum:168

H3B1C3              	100.00%		D3B0P6              	100.00%
Bootstrap support for H3B1C3 as seed ortholog is 100%.
Bootstrap support for D3B0P6 as seed ortholog is 100%.

Group of orthologs #1597. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 P.pallidum:168

H3B3C7              	100.00%		D3B1F7              	100.00%
Bootstrap support for H3B3C7 as seed ortholog is 100%.
Bootstrap support for D3B1F7 as seed ortholog is 100%.

Group of orthologs #1598. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 P.pallidum:168

H3AA97              	100.00%		D3BQC9              	100.00%
Bootstrap support for H3AA97 as seed ortholog is 100%.
Bootstrap support for D3BQC9 as seed ortholog is 100%.

Group of orthologs #1599. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 P.pallidum:168

H3AJB8              	100.00%		D3BJB1              	100.00%
Bootstrap support for H3AJB8 as seed ortholog is 100%.
Bootstrap support for D3BJB1 as seed ortholog is 100%.

Group of orthologs #1600. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 P.pallidum:168

H3AYX0              	100.00%		D3BLU5              	100.00%
Bootstrap support for H3AYX0 as seed ortholog is 100%.
Bootstrap support for D3BLU5 as seed ortholog is 100%.

Group of orthologs #1601. Best score 167 bits
Score difference with first non-orthologous sequence - L.chalumnae:167 P.pallidum:112

H2ZW20              	100.00%		D3B9F2              	100.00%
Bootstrap support for H2ZW20 as seed ortholog is 100%.
Bootstrap support for D3B9F2 as seed ortholog is 99%.

Group of orthologs #1602. Best score 167 bits
Score difference with first non-orthologous sequence - L.chalumnae:167 P.pallidum:167

H3A1N9              	100.00%		D3B5B5              	100.00%
Bootstrap support for H3A1N9 as seed ortholog is 100%.
Bootstrap support for D3B5B5 as seed ortholog is 100%.

Group of orthologs #1603. Best score 167 bits
Score difference with first non-orthologous sequence - L.chalumnae:167 P.pallidum:167

H3AZ27              	100.00%		D3BAI0              	100.00%
Bootstrap support for H3AZ27 as seed ortholog is 100%.
Bootstrap support for D3BAI0 as seed ortholog is 100%.

Group of orthologs #1604. Best score 167 bits
Score difference with first non-orthologous sequence - L.chalumnae:167 P.pallidum:167

H3BFH2              	100.00%		D3B6T6              	100.00%
Bootstrap support for H3BFH2 as seed ortholog is 100%.
Bootstrap support for D3B6T6 as seed ortholog is 100%.

Group of orthologs #1605. Best score 167 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.pallidum:167

H3AWW3              	100.00%		D3BR38              	100.00%
Bootstrap support for H3AWW3 as seed ortholog is 92%.
Bootstrap support for D3BR38 as seed ortholog is 100%.

Group of orthologs #1606. Best score 167 bits
Score difference with first non-orthologous sequence - L.chalumnae:167 P.pallidum:167

H3B6I8              	100.00%		D3BQF5              	100.00%
Bootstrap support for H3B6I8 as seed ortholog is 100%.
Bootstrap support for D3BQF5 as seed ortholog is 100%.

Group of orthologs #1607. Best score 167 bits
Score difference with first non-orthologous sequence - L.chalumnae:167 P.pallidum:167

H3BI71              	100.00%		D3BKY4              	100.00%
Bootstrap support for H3BI71 as seed ortholog is 100%.
Bootstrap support for D3BKY4 as seed ortholog is 100%.

Group of orthologs #1608. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 P.pallidum:35

H3A2S2              	100.00%		D3AXF3              	100.00%
                    	       		D3AZB2              	11.09%
Bootstrap support for H3A2S2 as seed ortholog is 95%.
Bootstrap support for D3AXF3 as seed ortholog is 86%.

Group of orthologs #1609. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:166 P.pallidum:166

H3A0N6              	100.00%		D3BQ40              	100.00%
H3B3I2              	43.27%		
Bootstrap support for H3A0N6 as seed ortholog is 100%.
Bootstrap support for D3BQ40 as seed ortholog is 100%.

Group of orthologs #1610. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:166 P.pallidum:166

H3AKK7              	100.00%		D3BM60              	100.00%
H2ZXZ2              	12.41%		
Bootstrap support for H3AKK7 as seed ortholog is 100%.
Bootstrap support for D3BM60 as seed ortholog is 100%.

Group of orthologs #1611. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:166 P.pallidum:166

H3ADQ1              	100.00%		D3AYN0              	100.00%
Bootstrap support for H3ADQ1 as seed ortholog is 100%.
Bootstrap support for D3AYN0 as seed ortholog is 100%.

Group of orthologs #1612. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 P.pallidum:166

H3A604              	100.00%		D3BCC3              	100.00%
Bootstrap support for H3A604 as seed ortholog is 99%.
Bootstrap support for D3BCC3 as seed ortholog is 100%.

Group of orthologs #1613. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:166 P.pallidum:166

H3ASZ1              	100.00%		D3AXS4              	100.00%
Bootstrap support for H3ASZ1 as seed ortholog is 100%.
Bootstrap support for D3AXS4 as seed ortholog is 100%.

Group of orthologs #1614. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:166 P.pallidum:166

H3AB68              	100.00%		D3BFU4              	100.00%
Bootstrap support for H3AB68 as seed ortholog is 100%.
Bootstrap support for D3BFU4 as seed ortholog is 100%.

Group of orthologs #1615. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:166 P.pallidum:166

H3AVV5              	100.00%		D3AZU6              	100.00%
Bootstrap support for H3AVV5 as seed ortholog is 100%.
Bootstrap support for D3AZU6 as seed ortholog is 100%.

Group of orthologs #1616. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.pallidum:166

H3AGQ1              	100.00%		D3BCK2              	100.00%
Bootstrap support for H3AGQ1 as seed ortholog is 97%.
Bootstrap support for D3BCK2 as seed ortholog is 100%.

Group of orthologs #1617. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:166 P.pallidum:166

H3ASQ2              	100.00%		D3B6Y2              	100.00%
Bootstrap support for H3ASQ2 as seed ortholog is 100%.
Bootstrap support for D3B6Y2 as seed ortholog is 100%.

Group of orthologs #1618. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:166 P.pallidum:166

M3XKR4              	100.00%		D3BFX3              	100.00%
Bootstrap support for M3XKR4 as seed ortholog is 100%.
Bootstrap support for D3BFX3 as seed ortholog is 100%.

Group of orthologs #1619. Best score 165 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 P.pallidum:165

M3XHJ4              	100.00%		D3BI16              	100.00%
H3B6Y2              	42.17%		D3BS67              	27.85%
Bootstrap support for M3XHJ4 as seed ortholog is 80%.
Bootstrap support for D3BI16 as seed ortholog is 100%.

Group of orthologs #1620. Best score 165 bits
Score difference with first non-orthologous sequence - L.chalumnae:165 P.pallidum:165

H3A275              	100.00%		D3BC97              	100.00%
H3B8W6              	70.42%		
Bootstrap support for H3A275 as seed ortholog is 100%.
Bootstrap support for D3BC97 as seed ortholog is 100%.

Group of orthologs #1621. Best score 165 bits
Score difference with first non-orthologous sequence - L.chalumnae:165 P.pallidum:165

H3B274              	100.00%		D3BAX8              	100.00%
H3A8D8              	64.86%		
Bootstrap support for H3B274 as seed ortholog is 100%.
Bootstrap support for D3BAX8 as seed ortholog is 100%.

Group of orthologs #1622. Best score 165 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 P.pallidum:165

H3B2H7              	100.00%		D3BS21              	100.00%
H3AJ17              	5.57%		
Bootstrap support for H3B2H7 as seed ortholog is 93%.
Bootstrap support for D3BS21 as seed ortholog is 100%.

Group of orthologs #1623. Best score 165 bits
Score difference with first non-orthologous sequence - L.chalumnae:165 P.pallidum:165

H2ZTZ7              	100.00%		D3BH33              	100.00%
Bootstrap support for H2ZTZ7 as seed ortholog is 100%.
Bootstrap support for D3BH33 as seed ortholog is 100%.

Group of orthologs #1624. Best score 165 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 P.pallidum:72

H3AJ63              	100.00%		D3B6S0              	100.00%
Bootstrap support for H3AJ63 as seed ortholog is 98%.
Bootstrap support for D3B6S0 as seed ortholog is 96%.

Group of orthologs #1625. Best score 165 bits
Score difference with first non-orthologous sequence - L.chalumnae:165 P.pallidum:165

H3ATH4              	100.00%		D3B1P5              	100.00%
Bootstrap support for H3ATH4 as seed ortholog is 100%.
Bootstrap support for D3B1P5 as seed ortholog is 100%.

Group of orthologs #1626. Best score 165 bits
Score difference with first non-orthologous sequence - L.chalumnae:165 P.pallidum:165

H3B715              	100.00%		D3BAK8              	100.00%
Bootstrap support for H3B715 as seed ortholog is 100%.
Bootstrap support for D3BAK8 as seed ortholog is 100%.

Group of orthologs #1627. Best score 164 bits
Score difference with first non-orthologous sequence - L.chalumnae:164 P.pallidum:28

H3B4K7              	100.00%		D3B9K4              	100.00%
H3B382              	100.00%		D3B9J7              	100.00%
H3BID9              	10.19%		
Bootstrap support for H3B4K7 as seed ortholog is 100%.
Bootstrap support for H3B382 as seed ortholog is 100%.
Bootstrap support for D3B9K4 as seed ortholog is 72%.
Alternative seed ortholog is D3BDL9 (28 bits away from this cluster)
Bootstrap support for D3B9J7 as seed ortholog is 64%.
Alternative seed ortholog is D3BDL9 (28 bits away from this cluster)

Group of orthologs #1628. Best score 164 bits
Score difference with first non-orthologous sequence - L.chalumnae:164 P.pallidum:164

H3AKE0              	100.00%		D3B9Q3              	100.00%
H3BI81              	25.26%		
Bootstrap support for H3AKE0 as seed ortholog is 100%.
Bootstrap support for D3B9Q3 as seed ortholog is 100%.

Group of orthologs #1629. Best score 164 bits
Score difference with first non-orthologous sequence - L.chalumnae:164 P.pallidum:164

H3AEH4              	100.00%		D3BH46              	100.00%
H2ZWF4              	75.83%		
Bootstrap support for H3AEH4 as seed ortholog is 100%.
Bootstrap support for D3BH46 as seed ortholog is 100%.

Group of orthologs #1630. Best score 164 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 P.pallidum:3

H3B0X0              	100.00%		D3AVN2              	100.00%
Bootstrap support for H3B0X0 as seed ortholog is 90%.
Bootstrap support for D3AVN2 as seed ortholog is 63%.
Alternative seed ortholog is D3BRJ2 (3 bits away from this cluster)

Group of orthologs #1631. Best score 164 bits
Score difference with first non-orthologous sequence - L.chalumnae:164 P.pallidum:164

H3B2H4              	100.00%		D3AWN7              	100.00%
Bootstrap support for H3B2H4 as seed ortholog is 100%.
Bootstrap support for D3AWN7 as seed ortholog is 100%.

Group of orthologs #1632. Best score 164 bits
Score difference with first non-orthologous sequence - L.chalumnae:164 P.pallidum:164

H3B650              	100.00%		D3BGG8              	100.00%
Bootstrap support for H3B650 as seed ortholog is 100%.
Bootstrap support for D3BGG8 as seed ortholog is 100%.

Group of orthologs #1633. Best score 164 bits
Score difference with first non-orthologous sequence - L.chalumnae:164 P.pallidum:164

H3B9D0              	100.00%		D3BIR0              	100.00%
Bootstrap support for H3B9D0 as seed ortholog is 100%.
Bootstrap support for D3BIR0 as seed ortholog is 100%.

Group of orthologs #1634. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 P.pallidum:163

H3BA06              	100.00%		D3BN32              	100.00%
H3B838              	100.00%		D3BN31              	100.00%
H3ARV0              	18.40%		D3B294              	62.08%
H2ZW80              	7.40%		
Bootstrap support for H3BA06 as seed ortholog is 100%.
Bootstrap support for H3B838 as seed ortholog is 100%.
Bootstrap support for D3BN32 as seed ortholog is 100%.
Bootstrap support for D3BN31 as seed ortholog is 100%.

Group of orthologs #1635. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 P.pallidum:163

H3B8P1              	100.00%		D3BIR5              	100.00%
M3XI03              	43.57%		
Bootstrap support for H3B8P1 as seed ortholog is 100%.
Bootstrap support for D3BIR5 as seed ortholog is 100%.

Group of orthologs #1636. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 P.pallidum:163

H3A157              	100.00%		D3B155              	100.00%
Bootstrap support for H3A157 as seed ortholog is 100%.
Bootstrap support for D3B155 as seed ortholog is 100%.

Group of orthologs #1637. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 P.pallidum:163

H3A1P6              	100.00%		D3B482              	100.00%
Bootstrap support for H3A1P6 as seed ortholog is 100%.
Bootstrap support for D3B482 as seed ortholog is 100%.

Group of orthologs #1638. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 P.pallidum:163

H3AZ72              	100.00%		D3B526              	100.00%
Bootstrap support for H3AZ72 as seed ortholog is 100%.
Bootstrap support for D3B526 as seed ortholog is 100%.

Group of orthologs #1639. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 P.pallidum:163

H3B414              	100.00%		D3B3N0              	100.00%
Bootstrap support for H3B414 as seed ortholog is 100%.
Bootstrap support for D3B3N0 as seed ortholog is 100%.

Group of orthologs #1640. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 P.pallidum:163

H3AVR8              	100.00%		D3BTZ3              	100.00%
Bootstrap support for H3AVR8 as seed ortholog is 100%.
Bootstrap support for D3BTZ3 as seed ortholog is 100%.

Group of orthologs #1641. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 P.pallidum:163

M3XHH6              	100.00%		D3B9X9              	100.00%
Bootstrap support for M3XHH6 as seed ortholog is 100%.
Bootstrap support for D3B9X9 as seed ortholog is 100%.

Group of orthologs #1642. Best score 162 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 P.pallidum:50

H3B4L5              	100.00%		D3AZN7              	100.00%
M3XK02              	20.22%		D3AZN6              	37.20%
H3A3M6              	11.89%		D3BSP2              	27.09%
                    	       		D3BSP5              	26.55%
Bootstrap support for H3B4L5 as seed ortholog is 84%.
Bootstrap support for D3AZN7 as seed ortholog is 81%.

Group of orthologs #1643. Best score 162 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.pallidum:162

M3XJ95              	100.00%		D3BRU8              	100.00%
H3ACQ7              	17.25%		
H3ATC5              	5.33%		
Bootstrap support for M3XJ95 as seed ortholog is 88%.
Bootstrap support for D3BRU8 as seed ortholog is 100%.

Group of orthologs #1644. Best score 162 bits
Score difference with first non-orthologous sequence - L.chalumnae:162 P.pallidum:162

H3B5R2              	100.00%		D3BM97              	100.00%
H3BBT3              	44.56%		
Bootstrap support for H3B5R2 as seed ortholog is 100%.
Bootstrap support for D3BM97 as seed ortholog is 100%.

Group of orthologs #1645. Best score 162 bits
Score difference with first non-orthologous sequence - L.chalumnae:162 P.pallidum:162

H3AEX0              	100.00%		D3AVK3              	100.00%
Bootstrap support for H3AEX0 as seed ortholog is 100%.
Bootstrap support for D3AVK3 as seed ortholog is 100%.

Group of orthologs #1646. Best score 162 bits
Score difference with first non-orthologous sequence - L.chalumnae:162 P.pallidum:162

H3AC16              	100.00%		D3B0Z7              	100.00%
Bootstrap support for H3AC16 as seed ortholog is 100%.
Bootstrap support for D3B0Z7 as seed ortholog is 100%.

Group of orthologs #1647. Best score 162 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 P.pallidum:87

H3AQW6              	100.00%		D3BPF6              	100.00%
Bootstrap support for H3AQW6 as seed ortholog is 99%.
Bootstrap support for D3BPF6 as seed ortholog is 99%.

Group of orthologs #1648. Best score 162 bits
Score difference with first non-orthologous sequence - L.chalumnae:162 P.pallidum:162

H3B2R8              	100.00%		D3BN97              	100.00%
Bootstrap support for H3B2R8 as seed ortholog is 100%.
Bootstrap support for D3BN97 as seed ortholog is 100%.

Group of orthologs #1649. Best score 162 bits
Score difference with first non-orthologous sequence - L.chalumnae:162 P.pallidum:162

M3XGK0              	100.00%		D3BGR1              	100.00%
Bootstrap support for M3XGK0 as seed ortholog is 100%.
Bootstrap support for D3BGR1 as seed ortholog is 100%.

Group of orthologs #1650. Best score 162 bits
Score difference with first non-orthologous sequence - L.chalumnae:162 P.pallidum:106

H3B7I8              	100.00%		D3BSJ3              	100.00%
Bootstrap support for H3B7I8 as seed ortholog is 100%.
Bootstrap support for D3BSJ3 as seed ortholog is 99%.

Group of orthologs #1651. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 P.pallidum:161

H3AJT5              	100.00%		D3BF35              	100.00%
H3BHB1              	29.89%		
M3XJB5              	8.14%		
H3ATL2              	7.53%		
Bootstrap support for H3AJT5 as seed ortholog is 100%.
Bootstrap support for D3BF35 as seed ortholog is 100%.

Group of orthologs #1652. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 P.pallidum:161

H3A9D6              	100.00%		D3BIL0              	100.00%
H3ACA6              	58.02%		
Bootstrap support for H3A9D6 as seed ortholog is 100%.
Bootstrap support for D3BIL0 as seed ortholog is 100%.

Group of orthologs #1653. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 P.pallidum:161

H3AAQ5              	100.00%		D3AWG0              	100.00%
Bootstrap support for H3AAQ5 as seed ortholog is 100%.
Bootstrap support for D3AWG0 as seed ortholog is 100%.

Group of orthologs #1654. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 P.pallidum:161

H3AK71              	100.00%		D3B5X9              	100.00%
Bootstrap support for H3AK71 as seed ortholog is 100%.
Bootstrap support for D3B5X9 as seed ortholog is 100%.

Group of orthologs #1655. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 P.pallidum:161

H3AU57              	100.00%		D3AYL7              	100.00%
Bootstrap support for H3AU57 as seed ortholog is 100%.
Bootstrap support for D3AYL7 as seed ortholog is 100%.

Group of orthologs #1656. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 P.pallidum:161

H3AA15              	100.00%		D3BSN4              	100.00%
Bootstrap support for H3AA15 as seed ortholog is 100%.
Bootstrap support for D3BSN4 as seed ortholog is 100%.

Group of orthologs #1657. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 P.pallidum:161

H3AA33              	100.00%		D3BUU3              	100.00%
Bootstrap support for H3AA33 as seed ortholog is 100%.
Bootstrap support for D3BUU3 as seed ortholog is 100%.

Group of orthologs #1658. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 P.pallidum:161

H3B312              	100.00%		D3B912              	100.00%
Bootstrap support for H3B312 as seed ortholog is 100%.
Bootstrap support for D3B912 as seed ortholog is 100%.

Group of orthologs #1659. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 P.pallidum:161

H3BHR7              	100.00%		D3BAU7              	100.00%
Bootstrap support for H3BHR7 as seed ortholog is 100%.
Bootstrap support for D3BAU7 as seed ortholog is 100%.

Group of orthologs #1660. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 P.pallidum:161

H3BI83              	100.00%		D3BK33              	100.00%
Bootstrap support for H3BI83 as seed ortholog is 100%.
Bootstrap support for D3BK33 as seed ortholog is 100%.

Group of orthologs #1661. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 P.pallidum:161

H3BG24              	100.00%		D3BP95              	100.00%
Bootstrap support for H3BG24 as seed ortholog is 100%.
Bootstrap support for D3BP95 as seed ortholog is 100%.

Group of orthologs #1662. Best score 160 bits
Score difference with first non-orthologous sequence - L.chalumnae:160 P.pallidum:160

H2ZU62              	100.00%		D3BI96              	100.00%
Bootstrap support for H2ZU62 as seed ortholog is 100%.
Bootstrap support for D3BI96 as seed ortholog is 100%.

Group of orthologs #1663. Best score 160 bits
Score difference with first non-orthologous sequence - L.chalumnae:160 P.pallidum:160

H3AIQ9              	100.00%		D3BE16              	100.00%
Bootstrap support for H3AIQ9 as seed ortholog is 100%.
Bootstrap support for D3BE16 as seed ortholog is 100%.

Group of orthologs #1664. Best score 160 bits
Score difference with first non-orthologous sequence - L.chalumnae:160 P.pallidum:160

H3AYU6              	100.00%		D3BHT1              	100.00%
Bootstrap support for H3AYU6 as seed ortholog is 100%.
Bootstrap support for D3BHT1 as seed ortholog is 100%.

Group of orthologs #1665. Best score 159 bits
Score difference with first non-orthologous sequence - L.chalumnae:159 P.pallidum:159

H2ZV54              	100.00%		D3BBM6              	100.00%
H3AEE6              	100.00%		
Bootstrap support for H2ZV54 as seed ortholog is 100%.
Bootstrap support for H3AEE6 as seed ortholog is 100%.
Bootstrap support for D3BBM6 as seed ortholog is 100%.

Group of orthologs #1666. Best score 159 bits
Score difference with first non-orthologous sequence - L.chalumnae:159 P.pallidum:159

H3A8I9              	100.00%		D3B7N6              	100.00%
H3AD97              	33.81%		
Bootstrap support for H3A8I9 as seed ortholog is 100%.
Bootstrap support for D3B7N6 as seed ortholog is 100%.

Group of orthologs #1667. Best score 159 bits
Score difference with first non-orthologous sequence - L.chalumnae:159 P.pallidum:159

H3B5N4              	100.00%		D3BSQ5              	100.00%
                    	       		D3BJP6              	9.89%
Bootstrap support for H3B5N4 as seed ortholog is 100%.
Bootstrap support for D3BSQ5 as seed ortholog is 100%.

Group of orthologs #1668. Best score 159 bits
Score difference with first non-orthologous sequence - L.chalumnae:1 P.pallidum:35

H3A466              	100.00%		D3B2T9              	100.00%
Bootstrap support for H3A466 as seed ortholog is 48%.
Alternative seed ortholog is H2ZWL7 (1 bits away from this cluster)
Bootstrap support for D3B2T9 as seed ortholog is 91%.

Group of orthologs #1669. Best score 159 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 P.pallidum:159

H3AN30              	100.00%		D3AY45              	100.00%
Bootstrap support for H3AN30 as seed ortholog is 99%.
Bootstrap support for D3AY45 as seed ortholog is 100%.

Group of orthologs #1670. Best score 159 bits
Score difference with first non-orthologous sequence - L.chalumnae:159 P.pallidum:159

H3AWT4              	100.00%		D3BTP4              	100.00%
Bootstrap support for H3AWT4 as seed ortholog is 100%.
Bootstrap support for D3BTP4 as seed ortholog is 100%.

Group of orthologs #1671. Best score 159 bits
Score difference with first non-orthologous sequence - L.chalumnae:159 P.pallidum:159

H3BIF8              	100.00%		D3BHL3              	100.00%
Bootstrap support for H3BIF8 as seed ortholog is 100%.
Bootstrap support for D3BHL3 as seed ortholog is 100%.

Group of orthologs #1672. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 P.pallidum:158

H3A411              	100.00%		D3BLD6              	100.00%
H3AG56              	60.00%		
Bootstrap support for H3A411 as seed ortholog is 90%.
Bootstrap support for D3BLD6 as seed ortholog is 100%.

Group of orthologs #1673. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 P.pallidum:38

H3ACZ1              	100.00%		D3B3G4              	100.00%
Bootstrap support for H3ACZ1 as seed ortholog is 91%.
Bootstrap support for D3B3G4 as seed ortholog is 71%.
Alternative seed ortholog is D3B9T0 (38 bits away from this cluster)

Group of orthologs #1674. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:158 P.pallidum:158

H3A8F1              	100.00%		D3BHG8              	100.00%
Bootstrap support for H3A8F1 as seed ortholog is 100%.
Bootstrap support for D3BHG8 as seed ortholog is 100%.

Group of orthologs #1675. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:158 P.pallidum:158

H3AGD9              	100.00%		D3BGW8              	100.00%
Bootstrap support for H3AGD9 as seed ortholog is 100%.
Bootstrap support for D3BGW8 as seed ortholog is 100%.

Group of orthologs #1676. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:158 P.pallidum:158

H3AGE4              	100.00%		D3BPH9              	100.00%
Bootstrap support for H3AGE4 as seed ortholog is 100%.
Bootstrap support for D3BPH9 as seed ortholog is 100%.

Group of orthologs #1677. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.pallidum:158

H3APF5              	100.00%		D3BKL0              	100.00%
Bootstrap support for H3APF5 as seed ortholog is 96%.
Bootstrap support for D3BKL0 as seed ortholog is 100%.

Group of orthologs #1678. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.pallidum:158

H3B1B8              	100.00%		D3BDC7              	100.00%
Bootstrap support for H3B1B8 as seed ortholog is 99%.
Bootstrap support for D3BDC7 as seed ortholog is 100%.

Group of orthologs #1679. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:158 P.pallidum:158

H3BB34              	100.00%		D3B5L5              	100.00%
Bootstrap support for H3BB34 as seed ortholog is 100%.
Bootstrap support for D3B5L5 as seed ortholog is 100%.

Group of orthologs #1680. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:158 P.pallidum:158

H3B1E1              	100.00%		D3BQT7              	100.00%
Bootstrap support for H3B1E1 as seed ortholog is 100%.
Bootstrap support for D3BQT7 as seed ortholog is 100%.

Group of orthologs #1681. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:158 P.pallidum:158

H3BB29              	100.00%		D3BL81              	100.00%
Bootstrap support for H3BB29 as seed ortholog is 100%.
Bootstrap support for D3BL81 as seed ortholog is 100%.

Group of orthologs #1682. Best score 157 bits
Score difference with first non-orthologous sequence - L.chalumnae:157 P.pallidum:157

H3B174              	100.00%		D3AVI6              	100.00%
H2ZY71              	40.22%		
Bootstrap support for H3B174 as seed ortholog is 100%.
Bootstrap support for D3AVI6 as seed ortholog is 100%.

Group of orthologs #1683. Best score 157 bits
Score difference with first non-orthologous sequence - L.chalumnae:157 P.pallidum:24

H3B4I9              	100.00%		D3B816              	100.00%
                    	       		D3BJC9              	15.09%
Bootstrap support for H3B4I9 as seed ortholog is 100%.
Bootstrap support for D3B816 as seed ortholog is 57%.
Alternative seed ortholog is D3AYP0 (24 bits away from this cluster)

Group of orthologs #1684. Best score 157 bits
Score difference with first non-orthologous sequence - L.chalumnae:157 P.pallidum:157

H3A243              	100.00%		D3B010              	100.00%
Bootstrap support for H3A243 as seed ortholog is 100%.
Bootstrap support for D3B010 as seed ortholog is 100%.

Group of orthologs #1685. Best score 157 bits
Score difference with first non-orthologous sequence - L.chalumnae:157 P.pallidum:157

H3AJI9              	100.00%		D3BBT7              	100.00%
Bootstrap support for H3AJI9 as seed ortholog is 100%.
Bootstrap support for D3BBT7 as seed ortholog is 100%.

Group of orthologs #1686. Best score 157 bits
Score difference with first non-orthologous sequence - L.chalumnae:157 P.pallidum:157

H3BCS7              	100.00%		D3B7U1              	100.00%
Bootstrap support for H3BCS7 as seed ortholog is 100%.
Bootstrap support for D3B7U1 as seed ortholog is 100%.

Group of orthologs #1687. Best score 157 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.pallidum:157

H3BCI9              	100.00%		D3B8C9              	100.00%
Bootstrap support for H3BCI9 as seed ortholog is 86%.
Bootstrap support for D3B8C9 as seed ortholog is 100%.

Group of orthologs #1688. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.pallidum:82

H3B2B3              	100.00%		D3BSD2              	100.00%
H3B7E7              	61.16%		
H3AAF1              	11.85%		
H3BFD6              	10.50%		
H3BGN6              	9.55%		
Bootstrap support for H3B2B3 as seed ortholog is 83%.
Bootstrap support for D3BSD2 as seed ortholog is 78%.

Group of orthologs #1689. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:156 P.pallidum:156

H3AWM8              	100.00%		D3B6P4              	100.00%
H3AK51              	23.79%		
H2ZXV2              	15.19%		
Bootstrap support for H3AWM8 as seed ortholog is 100%.
Bootstrap support for D3B6P4 as seed ortholog is 100%.

Group of orthologs #1690. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 P.pallidum:156

H2ZYC1              	100.00%		D3B0G4              	100.00%
H3B821              	32.79%		
Bootstrap support for H2ZYC1 as seed ortholog is 90%.
Bootstrap support for D3B0G4 as seed ortholog is 100%.

Group of orthologs #1691. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 P.pallidum:156

H3AF61              	100.00%		D3BJR6              	100.00%
M3XJ20              	33.11%		
Bootstrap support for H3AF61 as seed ortholog is 85%.
Bootstrap support for D3BJR6 as seed ortholog is 100%.

Group of orthologs #1692. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 P.pallidum:53

H3AKF6              	100.00%		D3BUZ0              	100.00%
H3B324              	16.56%		
Bootstrap support for H3AKF6 as seed ortholog is 99%.
Bootstrap support for D3BUZ0 as seed ortholog is 99%.

Group of orthologs #1693. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 P.pallidum:156

H2ZZ94              	100.00%		D3AW96              	100.00%
Bootstrap support for H2ZZ94 as seed ortholog is 99%.
Bootstrap support for D3AW96 as seed ortholog is 100%.

Group of orthologs #1694. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:156 P.pallidum:156

H3A242              	100.00%		D3B3D8              	100.00%
Bootstrap support for H3A242 as seed ortholog is 100%.
Bootstrap support for D3B3D8 as seed ortholog is 100%.

Group of orthologs #1695. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:156 P.pallidum:156

H3AIH1              	100.00%		D3AZW6              	100.00%
Bootstrap support for H3AIH1 as seed ortholog is 100%.
Bootstrap support for D3AZW6 as seed ortholog is 100%.

Group of orthologs #1696. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:156 P.pallidum:34

H3AMD3              	100.00%		D3AWT7              	100.00%
Bootstrap support for H3AMD3 as seed ortholog is 100%.
Bootstrap support for D3AWT7 as seed ortholog is 79%.

Group of orthologs #1697. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:156 P.pallidum:156

H3A9B5              	100.00%		D3BB36              	100.00%
Bootstrap support for H3A9B5 as seed ortholog is 100%.
Bootstrap support for D3BB36 as seed ortholog is 100%.

Group of orthologs #1698. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 P.pallidum:64

H3AFW8              	100.00%		D3BHH6              	100.00%
Bootstrap support for H3AFW8 as seed ortholog is 98%.
Bootstrap support for D3BHH6 as seed ortholog is 99%.

Group of orthologs #1699. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:156 P.pallidum:43

M3XJF6              	100.00%		D3BBZ9              	100.00%
Bootstrap support for M3XJF6 as seed ortholog is 100%.
Bootstrap support for D3BBZ9 as seed ortholog is 96%.

Group of orthologs #1700. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:156 P.pallidum:156

H3BIP8              	100.00%		D3BED2              	100.00%
Bootstrap support for H3BIP8 as seed ortholog is 100%.
Bootstrap support for D3BED2 as seed ortholog is 100%.

Group of orthologs #1701. Best score 155 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 P.pallidum:155

H3B8V0              	100.00%		D3B013              	100.00%
H3A8F5              	46.48%		
H3ASZ9              	32.93%		
H3B3D3              	27.91%		
Bootstrap support for H3B8V0 as seed ortholog is 56%.
Alternative seed ortholog is H3B552 (55 bits away from this cluster)
Bootstrap support for D3B013 as seed ortholog is 100%.

Group of orthologs #1702. Best score 155 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 P.pallidum:155

H3BHM5              	100.00%		D3BB02              	100.00%
H3BGY7              	46.35%		
H3A4X3              	39.84%		
H2ZZF6              	29.69%		
Bootstrap support for H3BHM5 as seed ortholog is 99%.
Bootstrap support for D3BB02 as seed ortholog is 100%.

Group of orthologs #1703. Best score 155 bits
Score difference with first non-orthologous sequence - L.chalumnae:155 P.pallidum:155

H3A097              	100.00%		D3AVM9              	100.00%
H3AG26              	100.00%		
H3BG90              	88.06%		
Bootstrap support for H3A097 as seed ortholog is 100%.
Bootstrap support for H3AG26 as seed ortholog is 100%.
Bootstrap support for D3AVM9 as seed ortholog is 100%.

Group of orthologs #1704. Best score 155 bits
Score difference with first non-orthologous sequence - L.chalumnae:155 P.pallidum:155

H2ZS14              	100.00%		D3BC80              	100.00%
H3A3V5              	30.27%		
Bootstrap support for H2ZS14 as seed ortholog is 100%.
Bootstrap support for D3BC80 as seed ortholog is 100%.

Group of orthologs #1705. Best score 155 bits
Score difference with first non-orthologous sequence - L.chalumnae:155 P.pallidum:155

H2ZYB4              	100.00%		D3AYE5              	100.00%
Bootstrap support for H2ZYB4 as seed ortholog is 100%.
Bootstrap support for D3AYE5 as seed ortholog is 100%.

Group of orthologs #1706. Best score 155 bits
Score difference with first non-orthologous sequence - L.chalumnae:155 P.pallidum:155

H3A4I9              	100.00%		D3BEK8              	100.00%
Bootstrap support for H3A4I9 as seed ortholog is 100%.
Bootstrap support for D3BEK8 as seed ortholog is 100%.

Group of orthologs #1707. Best score 155 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.pallidum:155

H3ASG6              	100.00%		D3B8X0              	100.00%
Bootstrap support for H3ASG6 as seed ortholog is 97%.
Bootstrap support for D3B8X0 as seed ortholog is 100%.

Group of orthologs #1708. Best score 155 bits
Score difference with first non-orthologous sequence - L.chalumnae:155 P.pallidum:155

H3AF95              	100.00%		D3BNB6              	100.00%
Bootstrap support for H3AF95 as seed ortholog is 100%.
Bootstrap support for D3BNB6 as seed ortholog is 100%.

Group of orthologs #1709. Best score 155 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 P.pallidum:74

H3B721              	100.00%		D3B4R9              	100.00%
Bootstrap support for H3B721 as seed ortholog is 99%.
Bootstrap support for D3B4R9 as seed ortholog is 96%.

Group of orthologs #1710. Best score 155 bits
Score difference with first non-orthologous sequence - L.chalumnae:155 P.pallidum:155

H3BFC0              	100.00%		D3BLE5              	100.00%
Bootstrap support for H3BFC0 as seed ortholog is 100%.
Bootstrap support for D3BLE5 as seed ortholog is 100%.

Group of orthologs #1711. Best score 154 bits
Score difference with first non-orthologous sequence - L.chalumnae:154 P.pallidum:154

H3B3E2              	100.00%		D3B3H3              	100.00%
H3A4X0              	72.79%		
H3BDZ9              	59.06%		
H3B0V9              	54.84%		
M3XK36              	7.83%		
Bootstrap support for H3B3E2 as seed ortholog is 100%.
Bootstrap support for D3B3H3 as seed ortholog is 100%.

Group of orthologs #1712. Best score 154 bits
Score difference with first non-orthologous sequence - L.chalumnae:154 P.pallidum:19

H3BDR1              	100.00%		D3BKK8              	100.00%
H3BC71              	16.88%		D3BI36              	9.09%
                    	       		D3B9V6              	5.84%
                    	       		D3BVD2              	5.84%
Bootstrap support for H3BDR1 as seed ortholog is 100%.
Bootstrap support for D3BKK8 as seed ortholog is 59%.
Alternative seed ortholog is D3BG92 (19 bits away from this cluster)

Group of orthologs #1713. Best score 154 bits
Score difference with first non-orthologous sequence - L.chalumnae:154 P.pallidum:154

H3A5H1              	100.00%		D3AWN6              	100.00%
                    	       		D3BIG9              	13.56%
Bootstrap support for H3A5H1 as seed ortholog is 100%.
Bootstrap support for D3AWN6 as seed ortholog is 100%.

Group of orthologs #1714. Best score 154 bits
Score difference with first non-orthologous sequence - L.chalumnae:154 P.pallidum:154

H3BG51              	100.00%		D3B3G5              	100.00%
H3AY81              	26.79%		
Bootstrap support for H3BG51 as seed ortholog is 100%.
Bootstrap support for D3B3G5 as seed ortholog is 100%.

Group of orthologs #1715. Best score 154 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 P.pallidum:154

H3ATE2              	100.00%		D3AZL1              	100.00%
Bootstrap support for H3ATE2 as seed ortholog is 85%.
Bootstrap support for D3AZL1 as seed ortholog is 100%.

Group of orthologs #1716. Best score 154 bits
Score difference with first non-orthologous sequence - L.chalumnae:154 P.pallidum:22

H3AWR9              	100.00%		D3BFC3              	100.00%
Bootstrap support for H3AWR9 as seed ortholog is 100%.
Bootstrap support for D3BFC3 as seed ortholog is 91%.

Group of orthologs #1717. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:153 P.pallidum:153

H3A9T2              	100.00%		D3BK56              	100.00%
H3AEU8              	17.47%		
Bootstrap support for H3A9T2 as seed ortholog is 100%.
Bootstrap support for D3BK56 as seed ortholog is 100%.

Group of orthologs #1718. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:153 P.pallidum:153

H3AI15              	100.00%		D3BJ55              	100.00%
H3AQI8              	19.01%		
Bootstrap support for H3AI15 as seed ortholog is 100%.
Bootstrap support for D3BJ55 as seed ortholog is 100%.

Group of orthologs #1719. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:70 P.pallidum:61

H3A4N1              	100.00%		D3B5D6              	100.00%
Bootstrap support for H3A4N1 as seed ortholog is 97%.
Bootstrap support for D3B5D6 as seed ortholog is 96%.

Group of orthologs #1720. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:153 P.pallidum:153

H3AQC8              	100.00%		D3AVU4              	100.00%
Bootstrap support for H3AQC8 as seed ortholog is 100%.
Bootstrap support for D3AVU4 as seed ortholog is 100%.

Group of orthologs #1721. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 P.pallidum:153

H3A6W3              	100.00%		D3BCB7              	100.00%
Bootstrap support for H3A6W3 as seed ortholog is 99%.
Bootstrap support for D3BCB7 as seed ortholog is 100%.

Group of orthologs #1722. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:153 P.pallidum:76

H3A5P0              	100.00%		D3BN57              	100.00%
Bootstrap support for H3A5P0 as seed ortholog is 100%.
Bootstrap support for D3BN57 as seed ortholog is 99%.

Group of orthologs #1723. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:153 P.pallidum:153

H3A073              	100.00%		D3BUX5              	100.00%
Bootstrap support for H3A073 as seed ortholog is 100%.
Bootstrap support for D3BUX5 as seed ortholog is 100%.

Group of orthologs #1724. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:153 P.pallidum:153

H3B7R4              	100.00%		D3BPI6              	100.00%
Bootstrap support for H3B7R4 as seed ortholog is 100%.
Bootstrap support for D3BPI6 as seed ortholog is 100%.

Group of orthologs #1725. Best score 152 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 P.pallidum:44

H3BF11              	100.00%		D3BRS7              	100.00%
H3BIC8              	100.00%		D3BQ27              	100.00%
H3BF34              	59.00%		D3B667              	12.83%
H3ADX5              	21.53%		
H3BBE0              	21.29%		
H3AEK5              	19.31%		
Bootstrap support for H3BF11 as seed ortholog is 95%.
Bootstrap support for H3BIC8 as seed ortholog is 72%.
Alternative seed ortholog is H3AXY4 (53 bits away from this cluster)
Bootstrap support for D3BRS7 as seed ortholog is 90%.
Bootstrap support for D3BQ27 as seed ortholog is 75%.

Group of orthologs #1726. Best score 152 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 P.pallidum:152

H3ABD9              	100.00%		D3BKI9              	100.00%
M3XHB9              	18.47%		
Bootstrap support for H3ABD9 as seed ortholog is 92%.
Bootstrap support for D3BKI9 as seed ortholog is 100%.

Group of orthologs #1727. Best score 152 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 P.pallidum:47

H3APP7              	100.00%		D3B4B8              	100.00%
Bootstrap support for H3APP7 as seed ortholog is 89%.
Bootstrap support for D3B4B8 as seed ortholog is 92%.

Group of orthologs #1728. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 P.pallidum:151

H3AQ36              	100.00%		D3B5Q8              	100.00%
H3A0E3              	48.92%		
Bootstrap support for H3AQ36 as seed ortholog is 100%.
Bootstrap support for D3B5Q8 as seed ortholog is 100%.

Group of orthologs #1729. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 P.pallidum:151

H3B750              	100.00%		D3AZV5              	100.00%
H3ATA1              	10.04%		
Bootstrap support for H3B750 as seed ortholog is 100%.
Bootstrap support for D3AZV5 as seed ortholog is 100%.

Group of orthologs #1730. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:15 P.pallidum:35

H3BBB1              	100.00%		D3B3V6              	100.00%
H3BAB2              	7.89%		
Bootstrap support for H3BBB1 as seed ortholog is 64%.
Alternative seed ortholog is H3AYZ1 (15 bits away from this cluster)
Bootstrap support for D3B3V6 as seed ortholog is 84%.

Group of orthologs #1731. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 P.pallidum:151

H3BHE2              	100.00%		D3B6Z8              	100.00%
H3B1E4              	48.33%		
Bootstrap support for H3BHE2 as seed ortholog is 100%.
Bootstrap support for D3B6Z8 as seed ortholog is 100%.

Group of orthologs #1732. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 P.pallidum:151

H3AA51              	100.00%		D3BFT0              	100.00%
Bootstrap support for H3AA51 as seed ortholog is 100%.
Bootstrap support for D3BFT0 as seed ortholog is 100%.

Group of orthologs #1733. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 P.pallidum:151

H3A3D8              	100.00%		D3BTQ7              	100.00%
Bootstrap support for H3A3D8 as seed ortholog is 100%.
Bootstrap support for D3BTQ7 as seed ortholog is 100%.

Group of orthologs #1734. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 P.pallidum:151

H3BDF2              	100.00%		D3B1Q8              	100.00%
Bootstrap support for H3BDF2 as seed ortholog is 100%.
Bootstrap support for D3B1Q8 as seed ortholog is 100%.

Group of orthologs #1735. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 P.pallidum:151

H3B3L7              	100.00%		D3BIE0              	100.00%
Bootstrap support for H3B3L7 as seed ortholog is 100%.
Bootstrap support for D3BIE0 as seed ortholog is 100%.

Group of orthologs #1736. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 P.pallidum:151

H3B8Z0              	100.00%		D3BM84              	100.00%
Bootstrap support for H3B8Z0 as seed ortholog is 100%.
Bootstrap support for D3BM84 as seed ortholog is 100%.

Group of orthologs #1737. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 P.pallidum:151

H3B2Y9              	100.00%		D3BTS9              	100.00%
Bootstrap support for H3B2Y9 as seed ortholog is 100%.
Bootstrap support for D3BTS9 as seed ortholog is 100%.

Group of orthologs #1738. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.pallidum:151

H3B7Y2              	100.00%		D3BT12              	100.00%
Bootstrap support for H3B7Y2 as seed ortholog is 100%.
Bootstrap support for D3BT12 as seed ortholog is 100%.

Group of orthologs #1739. Best score 150 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.pallidum:150

M3XL51              	100.00%		D3B7E2              	100.00%
H3ALK7              	51.26%		
H3AD17              	25.40%		
M3XLD2              	15.10%		
Bootstrap support for M3XL51 as seed ortholog is 99%.
Bootstrap support for D3B7E2 as seed ortholog is 100%.

Group of orthologs #1740. Best score 150 bits
Score difference with first non-orthologous sequence - L.chalumnae:150 P.pallidum:150

H3BEY5              	100.00%		D3BFF1              	100.00%
H2ZUL2              	49.41%		
H3APD9              	49.07%		
H3AMJ4              	44.31%		
Bootstrap support for H3BEY5 as seed ortholog is 100%.
Bootstrap support for D3BFF1 as seed ortholog is 100%.

Group of orthologs #1741. Best score 150 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 P.pallidum:150

H3B7U5              	100.00%		D3BGE3              	100.00%
H3B5S0              	31.49%		
Bootstrap support for H3B7U5 as seed ortholog is 96%.
Bootstrap support for D3BGE3 as seed ortholog is 100%.

Group of orthologs #1742. Best score 150 bits
Score difference with first non-orthologous sequence - L.chalumnae:32 P.pallidum:40

H3AYW3              	100.00%		D3BU73              	100.00%
H2ZWG2              	42.18%		
Bootstrap support for H3AYW3 as seed ortholog is 98%.
Bootstrap support for D3BU73 as seed ortholog is 97%.

Group of orthologs #1743. Best score 150 bits
Score difference with first non-orthologous sequence - L.chalumnae:150 P.pallidum:150

H3AVD4              	100.00%		D3AYG4              	100.00%
Bootstrap support for H3AVD4 as seed ortholog is 100%.
Bootstrap support for D3AYG4 as seed ortholog is 100%.

Group of orthologs #1744. Best score 150 bits
Score difference with first non-orthologous sequence - L.chalumnae:150 P.pallidum:150

H3B8F8              	100.00%		D3AVJ2              	100.00%
Bootstrap support for H3B8F8 as seed ortholog is 100%.
Bootstrap support for D3AVJ2 as seed ortholog is 100%.

Group of orthologs #1745. Best score 150 bits
Score difference with first non-orthologous sequence - L.chalumnae:150 P.pallidum:150

H3AZG4              	100.00%		D3B8P8              	100.00%
Bootstrap support for H3AZG4 as seed ortholog is 100%.
Bootstrap support for D3B8P8 as seed ortholog is 100%.

Group of orthologs #1746. Best score 150 bits
Score difference with first non-orthologous sequence - L.chalumnae:150 P.pallidum:150

H3AHX3              	100.00%		D3BV21              	100.00%
Bootstrap support for H3AHX3 as seed ortholog is 100%.
Bootstrap support for D3BV21 as seed ortholog is 100%.

Group of orthologs #1747. Best score 150 bits
Score difference with first non-orthologous sequence - L.chalumnae:150 P.pallidum:150

M3XIL1              	100.00%		D3B759              	100.00%
Bootstrap support for M3XIL1 as seed ortholog is 100%.
Bootstrap support for D3B759 as seed ortholog is 100%.

Group of orthologs #1748. Best score 149 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 P.pallidum:149

H3B6B1              	100.00%		D3BM71              	100.00%
                    	       		D3B665              	41.51%
                    	       		D3BT74              	39.45%
                    	       		D3BT94              	38.99%
                    	       		D3AY26              	27.52%
Bootstrap support for H3B6B1 as seed ortholog is 100%.
Bootstrap support for D3BM71 as seed ortholog is 100%.

Group of orthologs #1749. Best score 149 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 P.pallidum:149

H2ZXQ5              	100.00%		D3AXF9              	100.00%
Bootstrap support for H2ZXQ5 as seed ortholog is 100%.
Bootstrap support for D3AXF9 as seed ortholog is 100%.

Group of orthologs #1750. Best score 149 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 P.pallidum:149

H3AHR3              	100.00%		D3AZT3              	100.00%
Bootstrap support for H3AHR3 as seed ortholog is 100%.
Bootstrap support for D3AZT3 as seed ortholog is 100%.

Group of orthologs #1751. Best score 149 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.pallidum:149

H3AHZ4              	100.00%		D3B455              	100.00%
Bootstrap support for H3AHZ4 as seed ortholog is 90%.
Bootstrap support for D3B455 as seed ortholog is 100%.

Group of orthologs #1752. Best score 149 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.pallidum:149

H3A667              	100.00%		D3BLD3              	100.00%
Bootstrap support for H3A667 as seed ortholog is 96%.
Bootstrap support for D3BLD3 as seed ortholog is 100%.

Group of orthologs #1753. Best score 149 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 P.pallidum:149

H3AMW0              	100.00%		D3BHE5              	100.00%
Bootstrap support for H3AMW0 as seed ortholog is 100%.
Bootstrap support for D3BHE5 as seed ortholog is 100%.

Group of orthologs #1754. Best score 149 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 P.pallidum:149

H3AZA0              	100.00%		D3BKF7              	100.00%
Bootstrap support for H3AZA0 as seed ortholog is 100%.
Bootstrap support for D3BKF7 as seed ortholog is 100%.

Group of orthologs #1755. Best score 149 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 P.pallidum:149

H3B8Q1              	100.00%		D3BIH5              	100.00%
Bootstrap support for H3B8Q1 as seed ortholog is 100%.
Bootstrap support for D3BIH5 as seed ortholog is 100%.

Group of orthologs #1756. Best score 149 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 P.pallidum:149

H3B9D5              	100.00%		D3BPF1              	100.00%
Bootstrap support for H3B9D5 as seed ortholog is 100%.
Bootstrap support for D3BPF1 as seed ortholog is 100%.

Group of orthologs #1757. Best score 149 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 P.pallidum:149

H3B577              	100.00%		D3BTL0              	100.00%
Bootstrap support for H3B577 as seed ortholog is 100%.
Bootstrap support for D3BTL0 as seed ortholog is 100%.

Group of orthologs #1758. Best score 149 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 P.pallidum:149

H3B8D0              	100.00%		D3BVL0              	100.00%
Bootstrap support for H3B8D0 as seed ortholog is 100%.
Bootstrap support for D3BVL0 as seed ortholog is 100%.

Group of orthologs #1759. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 P.pallidum:30

H3AB14              	100.00%		D3B540              	100.00%
H3A2I4              	27.01%		
H3B3D9              	21.51%		
Bootstrap support for H3AB14 as seed ortholog is 99%.
Bootstrap support for D3B540 as seed ortholog is 99%.

Group of orthologs #1760. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.pallidum:148

H3A2C6              	100.00%		D3BNP7              	100.00%
H2ZT03              	44.26%		
H2ZYR4              	42.41%		
Bootstrap support for H3A2C6 as seed ortholog is 100%.
Bootstrap support for D3BNP7 as seed ortholog is 100%.

Group of orthologs #1761. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.pallidum:20

H3AUD3              	100.00%		D3BF10              	100.00%
H3AP45              	33.50%		
Bootstrap support for H3AUD3 as seed ortholog is 100%.
Bootstrap support for D3BF10 as seed ortholog is 83%.

Group of orthologs #1762. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.pallidum:148

H3A797              	100.00%		D3B2P1              	100.00%
Bootstrap support for H3A797 as seed ortholog is 100%.
Bootstrap support for D3B2P1 as seed ortholog is 100%.

Group of orthologs #1763. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.pallidum:148

H3ACX7              	100.00%		D3B5M3              	100.00%
Bootstrap support for H3ACX7 as seed ortholog is 100%.
Bootstrap support for D3B5M3 as seed ortholog is 100%.

Group of orthologs #1764. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.pallidum:148

H3AQQ6              	100.00%		D3AVH8              	100.00%
Bootstrap support for H3AQQ6 as seed ortholog is 100%.
Bootstrap support for D3AVH8 as seed ortholog is 100%.

Group of orthologs #1765. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.pallidum:148

H2ZWM6              	100.00%		D3BVG1              	100.00%
Bootstrap support for H2ZWM6 as seed ortholog is 100%.
Bootstrap support for D3BVG1 as seed ortholog is 100%.

Group of orthologs #1766. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.pallidum:148

H3AYN0              	100.00%		D3B2P5              	100.00%
Bootstrap support for H3AYN0 as seed ortholog is 100%.
Bootstrap support for D3B2P5 as seed ortholog is 100%.

Group of orthologs #1767. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.pallidum:148

H3B9T0              	100.00%		D3B195              	100.00%
Bootstrap support for H3B9T0 as seed ortholog is 100%.
Bootstrap support for D3B195 as seed ortholog is 100%.

Group of orthologs #1768. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.pallidum:148

H3BB44              	100.00%		D3B0K7              	100.00%
Bootstrap support for H3BB44 as seed ortholog is 100%.
Bootstrap support for D3B0K7 as seed ortholog is 100%.

Group of orthologs #1769. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.pallidum:148

H3ASQ1              	100.00%		D3BQA1              	100.00%
Bootstrap support for H3ASQ1 as seed ortholog is 100%.
Bootstrap support for D3BQA1 as seed ortholog is 100%.

Group of orthologs #1770. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.pallidum:148

H3B7B8              	100.00%		D3BEM3              	100.00%
Bootstrap support for H3B7B8 as seed ortholog is 97%.
Bootstrap support for D3BEM3 as seed ortholog is 100%.

Group of orthologs #1771. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.pallidum:148

M3XI11              	100.00%		D3B655              	100.00%
Bootstrap support for M3XI11 as seed ortholog is 100%.
Bootstrap support for D3B655 as seed ortholog is 100%.

Group of orthologs #1772. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.pallidum:148

H3AXN5              	100.00%		D3BTW0              	100.00%
Bootstrap support for H3AXN5 as seed ortholog is 100%.
Bootstrap support for D3BTW0 as seed ortholog is 100%.

Group of orthologs #1773. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.pallidum:148

H3BGA5              	100.00%		D3BEX2              	100.00%
Bootstrap support for H3BGA5 as seed ortholog is 100%.
Bootstrap support for D3BEX2 as seed ortholog is 100%.

Group of orthologs #1774. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 P.pallidum:148

H3BD94              	100.00%		D3BRK8              	100.00%
Bootstrap support for H3BD94 as seed ortholog is 100%.
Bootstrap support for D3BRK8 as seed ortholog is 100%.

Group of orthologs #1775. Best score 147 bits
Score difference with first non-orthologous sequence - L.chalumnae:95 P.pallidum:147

H2ZTK0              	100.00%		D3B5S1              	100.00%
Bootstrap support for H2ZTK0 as seed ortholog is 99%.
Bootstrap support for D3B5S1 as seed ortholog is 100%.

Group of orthologs #1776. Best score 147 bits
Score difference with first non-orthologous sequence - L.chalumnae:147 P.pallidum:147

H3AWU9              	100.00%		D3BAE0              	100.00%
Bootstrap support for H3AWU9 as seed ortholog is 100%.
Bootstrap support for D3BAE0 as seed ortholog is 100%.

Group of orthologs #1777. Best score 147 bits
Score difference with first non-orthologous sequence - L.chalumnae:147 P.pallidum:147

H3AJF5              	100.00%		D3BPV7              	100.00%
Bootstrap support for H3AJF5 as seed ortholog is 100%.
Bootstrap support for D3BPV7 as seed ortholog is 100%.

Group of orthologs #1778. Best score 147 bits
Score difference with first non-orthologous sequence - L.chalumnae:147 P.pallidum:147

H3BH19              	100.00%		D3BLV0              	100.00%
Bootstrap support for H3BH19 as seed ortholog is 100%.
Bootstrap support for D3BLV0 as seed ortholog is 100%.

Group of orthologs #1779. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 P.pallidum:146

H3A7Z2              	100.00%		D3B2Q2              	100.00%
H3AGF9              	100.00%		
H3A362              	9.34%		
Bootstrap support for H3A7Z2 as seed ortholog is 100%.
Bootstrap support for H3AGF9 as seed ortholog is 100%.
Bootstrap support for D3B2Q2 as seed ortholog is 100%.

Group of orthologs #1780. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:32 P.pallidum:75

H3ATC3              	100.00%		D3B703              	100.00%
H3B980              	40.06%		
Bootstrap support for H3ATC3 as seed ortholog is 83%.
Bootstrap support for D3B703 as seed ortholog is 99%.

Group of orthologs #1781. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 P.pallidum:146

H3AEP2              	100.00%		D3BIR6              	100.00%
H3AMD8              	70.56%		
Bootstrap support for H3AEP2 as seed ortholog is 99%.
Bootstrap support for D3BIR6 as seed ortholog is 100%.

Group of orthologs #1782. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.pallidum:146

H3BCF8              	100.00%		D3B835              	100.00%
                    	       		D3BDT5              	13.46%
Bootstrap support for H3BCF8 as seed ortholog is 99%.
Bootstrap support for D3B835 as seed ortholog is 100%.

Group of orthologs #1783. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 P.pallidum:146

H3AU60              	100.00%		D3BTK0              	100.00%
H3A201              	30.40%		
Bootstrap support for H3AU60 as seed ortholog is 100%.
Bootstrap support for D3BTK0 as seed ortholog is 100%.

Group of orthologs #1784. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 P.pallidum:146

H3B755              	100.00%		D3BM06              	100.00%
H3AM83              	51.45%		
Bootstrap support for H3B755 as seed ortholog is 100%.
Bootstrap support for D3BM06 as seed ortholog is 100%.

Group of orthologs #1785. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 P.pallidum:60

H3AGT1              	100.00%		D3AW25              	100.00%
Bootstrap support for H3AGT1 as seed ortholog is 100%.
Bootstrap support for D3AW25 as seed ortholog is 89%.

Group of orthologs #1786. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 P.pallidum:146

H3AEI5              	100.00%		D3B9T4              	100.00%
Bootstrap support for H3AEI5 as seed ortholog is 100%.
Bootstrap support for D3B9T4 as seed ortholog is 100%.

Group of orthologs #1787. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 P.pallidum:146

H2ZYI2              	100.00%		D3BQ09              	100.00%
Bootstrap support for H2ZYI2 as seed ortholog is 100%.
Bootstrap support for D3BQ09 as seed ortholog is 100%.

Group of orthologs #1788. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 P.pallidum:146

H3A0K1              	100.00%		D3BQ53              	100.00%
Bootstrap support for H3A0K1 as seed ortholog is 100%.
Bootstrap support for D3BQ53 as seed ortholog is 100%.

Group of orthologs #1789. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 P.pallidum:146

H3B380              	100.00%		D3B1A4              	100.00%
Bootstrap support for H3B380 as seed ortholog is 100%.
Bootstrap support for D3B1A4 as seed ortholog is 100%.

Group of orthologs #1790. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 P.pallidum:102

H3B9Y2              	100.00%		D3AW26              	100.00%
Bootstrap support for H3B9Y2 as seed ortholog is 73%.
Alternative seed ortholog is H3AFN0 (80 bits away from this cluster)
Bootstrap support for D3AW26 as seed ortholog is 99%.

Group of orthologs #1791. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 P.pallidum:146

H3BA96              	100.00%		D3B5V8              	100.00%
Bootstrap support for H3BA96 as seed ortholog is 100%.
Bootstrap support for D3B5V8 as seed ortholog is 100%.

Group of orthologs #1792. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 P.pallidum:146

H3AV11              	100.00%		D3BST7              	100.00%
Bootstrap support for H3AV11 as seed ortholog is 100%.
Bootstrap support for D3BST7 as seed ortholog is 100%.

Group of orthologs #1793. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 P.pallidum:146

H3B054              	100.00%		D3BNS1              	100.00%
Bootstrap support for H3B054 as seed ortholog is 100%.
Bootstrap support for D3BNS1 as seed ortholog is 100%.

Group of orthologs #1794. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 P.pallidum:146

H3B4S6              	100.00%		D3BKH0              	100.00%
Bootstrap support for H3B4S6 as seed ortholog is 100%.
Bootstrap support for D3BKH0 as seed ortholog is 100%.

Group of orthologs #1795. Best score 145 bits
Score difference with first non-orthologous sequence - L.chalumnae:12 P.pallidum:53

H3AHX9              	100.00%		D3B7E4              	100.00%
Bootstrap support for H3AHX9 as seed ortholog is 60%.
Alternative seed ortholog is H3BEI3 (12 bits away from this cluster)
Bootstrap support for D3B7E4 as seed ortholog is 89%.

Group of orthologs #1796. Best score 145 bits
Score difference with first non-orthologous sequence - L.chalumnae:145 P.pallidum:145

H3A0F4              	100.00%		D3BN51              	100.00%
Bootstrap support for H3A0F4 as seed ortholog is 100%.
Bootstrap support for D3BN51 as seed ortholog is 100%.

Group of orthologs #1797. Best score 145 bits
Score difference with first non-orthologous sequence - L.chalumnae:145 P.pallidum:145

H3AWY5              	100.00%		D3BHU6              	100.00%
Bootstrap support for H3AWY5 as seed ortholog is 100%.
Bootstrap support for D3BHU6 as seed ortholog is 100%.

Group of orthologs #1798. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 P.pallidum:144

H3AK36              	100.00%		D3AWN2              	100.00%
H3B455              	30.03%		
Bootstrap support for H3AK36 as seed ortholog is 100%.
Bootstrap support for D3AWN2 as seed ortholog is 100%.

Group of orthologs #1799. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 P.pallidum:11

H2ZXP5              	100.00%		D3B8B0              	100.00%
Bootstrap support for H2ZXP5 as seed ortholog is 83%.
Bootstrap support for D3B8B0 as seed ortholog is 56%.
Alternative seed ortholog is D3B3V9 (11 bits away from this cluster)

Group of orthologs #1800. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 P.pallidum:144

H2ZZE0              	100.00%		D3BMK0              	100.00%
Bootstrap support for H2ZZE0 as seed ortholog is 100%.
Bootstrap support for D3BMK0 as seed ortholog is 100%.

Group of orthologs #1801. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 P.pallidum:77

H3B266              	100.00%		D3B3R2              	100.00%
Bootstrap support for H3B266 as seed ortholog is 100%.
Bootstrap support for D3B3R2 as seed ortholog is 89%.

Group of orthologs #1802. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 P.pallidum:144

H3ACJ4              	100.00%		D3BQQ8              	100.00%
Bootstrap support for H3ACJ4 as seed ortholog is 100%.
Bootstrap support for D3BQQ8 as seed ortholog is 100%.

Group of orthologs #1803. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 P.pallidum:34

H3BIR7              	100.00%		D3AWB1              	100.00%
Bootstrap support for H3BIR7 as seed ortholog is 84%.
Bootstrap support for D3AWB1 as seed ortholog is 84%.

Group of orthologs #1804. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 P.pallidum:144

H3AU25              	100.00%		D3BIL1              	100.00%
Bootstrap support for H3AU25 as seed ortholog is 100%.
Bootstrap support for D3BIL1 as seed ortholog is 100%.

Group of orthologs #1805. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 P.pallidum:144

H3B084              	100.00%		D3BHK0              	100.00%
Bootstrap support for H3B084 as seed ortholog is 100%.
Bootstrap support for D3BHK0 as seed ortholog is 100%.

Group of orthologs #1806. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 P.pallidum:144

H3B6K4              	100.00%		D3BI19              	100.00%
Bootstrap support for H3B6K4 as seed ortholog is 100%.
Bootstrap support for D3BI19 as seed ortholog is 100%.

Group of orthologs #1807. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 P.pallidum:144

H3B8R0              	100.00%		D3BSD3              	100.00%
Bootstrap support for H3B8R0 as seed ortholog is 100%.
Bootstrap support for D3BSD3 as seed ortholog is 100%.

Group of orthologs #1808. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:143 P.pallidum:54

H3A8N3              	100.00%		D3B9L7              	100.00%
H3A6G0              	60.54%		
H3AHT6              	56.86%		
Bootstrap support for H3A8N3 as seed ortholog is 100%.
Bootstrap support for D3B9L7 as seed ortholog is 97%.

Group of orthologs #1809. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:9 P.pallidum:143

M3XIB4              	100.00%		D3B2X0              	100.00%
H3B166              	54.00%		
H3B338              	46.36%		
Bootstrap support for M3XIB4 as seed ortholog is 67%.
Alternative seed ortholog is H3A9F2 (9 bits away from this cluster)
Bootstrap support for D3B2X0 as seed ortholog is 100%.

Group of orthologs #1810. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:143 P.pallidum:143

H3AYZ3              	100.00%		D3AVK6              	100.00%
H3A8K7              	35.04%		
Bootstrap support for H3AYZ3 as seed ortholog is 100%.
Bootstrap support for D3AVK6 as seed ortholog is 100%.

Group of orthologs #1811. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:143 P.pallidum:143

H3AP35              	100.00%		D3B0L3              	100.00%
Bootstrap support for H3AP35 as seed ortholog is 100%.
Bootstrap support for D3B0L3 as seed ortholog is 100%.

Group of orthologs #1812. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:143 P.pallidum:143

H3A8M9              	100.00%		D3BUZ6              	100.00%
Bootstrap support for H3A8M9 as seed ortholog is 100%.
Bootstrap support for D3BUZ6 as seed ortholog is 100%.

Group of orthologs #1813. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:35 P.pallidum:82

H3B1A8              	100.00%		D3B9X0              	100.00%
Bootstrap support for H3B1A8 as seed ortholog is 92%.
Bootstrap support for D3B9X0 as seed ortholog is 99%.

Group of orthologs #1814. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:143 P.pallidum:143

H3AH06              	100.00%		D3BUK6              	100.00%
Bootstrap support for H3AH06 as seed ortholog is 100%.
Bootstrap support for D3BUK6 as seed ortholog is 100%.

Group of orthologs #1815. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:143 P.pallidum:143

H3B5U5              	100.00%		D3BH56              	100.00%
Bootstrap support for H3B5U5 as seed ortholog is 100%.
Bootstrap support for D3BH56 as seed ortholog is 100%.

Group of orthologs #1816. Best score 142 bits
Score difference with first non-orthologous sequence - L.chalumnae:142 P.pallidum:142

H3A865              	100.00%		D3BAM0              	100.00%
H3B8M0              	52.55%		
H3A2N0              	50.27%		
M3XHG8              	29.00%		
Bootstrap support for H3A865 as seed ortholog is 100%.
Bootstrap support for D3BAM0 as seed ortholog is 100%.

Group of orthologs #1817. Best score 142 bits
Score difference with first non-orthologous sequence - L.chalumnae:142 P.pallidum:142

H3AYN5              	100.00%		D3B0G8              	100.00%
H2ZUY5              	22.76%		D3B0G6              	31.75%
Bootstrap support for H3AYN5 as seed ortholog is 100%.
Bootstrap support for D3B0G8 as seed ortholog is 100%.

Group of orthologs #1818. Best score 142 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 P.pallidum:142

H3AXL3              	100.00%		D3BPV0              	100.00%
H3AFV8              	45.89%		
H3AVS6              	6.28%		
Bootstrap support for H3AXL3 as seed ortholog is 97%.
Bootstrap support for D3BPV0 as seed ortholog is 100%.

Group of orthologs #1819. Best score 142 bits
Score difference with first non-orthologous sequence - L.chalumnae:142 P.pallidum:142

H3AW49              	100.00%		D3BJI9              	100.00%
H3AC99              	59.27%		
Bootstrap support for H3AW49 as seed ortholog is 100%.
Bootstrap support for D3BJI9 as seed ortholog is 100%.

Group of orthologs #1820. Best score 142 bits
Score difference with first non-orthologous sequence - L.chalumnae:142 P.pallidum:142

H3BDH5              	100.00%		D3BPG5              	100.00%
H3ADA4              	8.87%		
Bootstrap support for H3BDH5 as seed ortholog is 100%.
Bootstrap support for D3BPG5 as seed ortholog is 100%.

Group of orthologs #1821. Best score 142 bits
Score difference with first non-orthologous sequence - L.chalumnae:142 P.pallidum:142

H3ALY6              	100.00%		D3AZM6              	100.00%
Bootstrap support for H3ALY6 as seed ortholog is 100%.
Bootstrap support for D3AZM6 as seed ortholog is 100%.

Group of orthologs #1822. Best score 142 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.pallidum:78

H3ALI9              	100.00%		D3B6C9              	100.00%
Bootstrap support for H3ALI9 as seed ortholog is 99%.
Bootstrap support for D3B6C9 as seed ortholog is 99%.

Group of orthologs #1823. Best score 142 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.pallidum:100

H3A7J9              	100.00%		D3BQN3              	100.00%
Bootstrap support for H3A7J9 as seed ortholog is 99%.
Bootstrap support for D3BQN3 as seed ortholog is 99%.

Group of orthologs #1824. Best score 142 bits
Score difference with first non-orthologous sequence - L.chalumnae:142 P.pallidum:142

H3ASK4              	100.00%		D3BDH2              	100.00%
Bootstrap support for H3ASK4 as seed ortholog is 100%.
Bootstrap support for D3BDH2 as seed ortholog is 100%.

Group of orthologs #1825. Best score 142 bits
Score difference with first non-orthologous sequence - L.chalumnae:142 P.pallidum:142

H3B7A7              	100.00%		D3BQV6              	100.00%
Bootstrap support for H3B7A7 as seed ortholog is 100%.
Bootstrap support for D3BQV6 as seed ortholog is 100%.

Group of orthologs #1826. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.pallidum:141

M3XK16              	100.00%		D3BKH9              	100.00%
H3AM06              	57.45%		
H3A0Z3              	8.51%		
Bootstrap support for M3XK16 as seed ortholog is 99%.
Bootstrap support for D3BKH9 as seed ortholog is 100%.

Group of orthologs #1827. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:141 P.pallidum:141

H3B042              	100.00%		D3AY38              	100.00%
H3A9X0              	6.24%		
Bootstrap support for H3B042 as seed ortholog is 100%.
Bootstrap support for D3AY38 as seed ortholog is 100%.

Group of orthologs #1828. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:141 P.pallidum:141

H3B0N7              	100.00%		D3BTK9              	100.00%
                    	       		D3B5E6              	16.43%
Bootstrap support for H3B0N7 as seed ortholog is 100%.
Bootstrap support for D3BTK9 as seed ortholog is 100%.

Group of orthologs #1829. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:9 P.pallidum:28

H2ZRS3              	100.00%		D3AX86              	100.00%
Bootstrap support for H2ZRS3 as seed ortholog is 56%.
Alternative seed ortholog is H3AXG7 (9 bits away from this cluster)
Bootstrap support for D3AX86 as seed ortholog is 75%.

Group of orthologs #1830. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:141 P.pallidum:141

H2ZUZ4              	100.00%		D3BE05              	100.00%
Bootstrap support for H2ZUZ4 as seed ortholog is 100%.
Bootstrap support for D3BE05 as seed ortholog is 100%.

Group of orthologs #1831. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:23 P.pallidum:141

H3AYG1              	100.00%		D3B7G3              	100.00%
Bootstrap support for H3AYG1 as seed ortholog is 86%.
Bootstrap support for D3B7G3 as seed ortholog is 100%.

Group of orthologs #1832. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:141 P.pallidum:141

H3B183              	100.00%		D3BTV9              	100.00%
Bootstrap support for H3B183 as seed ortholog is 100%.
Bootstrap support for D3BTV9 as seed ortholog is 100%.

Group of orthologs #1833. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 P.pallidum:48

H3AIM9              	100.00%		D3BAQ3              	100.00%
H3AF44              	22.84%		
H3AUP5              	8.98%		
H2ZUL9              	5.06%		
Bootstrap support for H3AIM9 as seed ortholog is 100%.
Bootstrap support for D3BAQ3 as seed ortholog is 96%.

Group of orthologs #1834. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 P.pallidum:34

H3AXR1              	100.00%		D3B7C7              	100.00%
H3A3Z7              	18.55%		
Bootstrap support for H3AXR1 as seed ortholog is 100%.
Bootstrap support for D3B7C7 as seed ortholog is 76%.

Group of orthologs #1835. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 P.pallidum:140

H3B8D1              	100.00%		D3BLD0              	100.00%
H3A3C5              	10.56%		
Bootstrap support for H3B8D1 as seed ortholog is 100%.
Bootstrap support for D3BLD0 as seed ortholog is 100%.

Group of orthologs #1836. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.pallidum:140

H3A1S2              	100.00%		D3BCF6              	100.00%
Bootstrap support for H3A1S2 as seed ortholog is 99%.
Bootstrap support for D3BCF6 as seed ortholog is 100%.

Group of orthologs #1837. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:95 P.pallidum:140

H3A805              	100.00%		D3B8I5              	100.00%
Bootstrap support for H3A805 as seed ortholog is 98%.
Bootstrap support for D3B8I5 as seed ortholog is 100%.

Group of orthologs #1838. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 P.pallidum:140

H3B243              	100.00%		D3BHF0              	100.00%
Bootstrap support for H3B243 as seed ortholog is 100%.
Bootstrap support for D3BHF0 as seed ortholog is 100%.

Group of orthologs #1839. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:36 P.pallidum:39

H3B673              	100.00%		D3BSG7              	100.00%
Bootstrap support for H3B673 as seed ortholog is 88%.
Bootstrap support for D3BSG7 as seed ortholog is 88%.

Group of orthologs #1840. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 P.pallidum:140

H3BFD4              	100.00%		D3BMB4              	100.00%
Bootstrap support for H3BFD4 as seed ortholog is 100%.
Bootstrap support for D3BMB4 as seed ortholog is 100%.

Group of orthologs #1841. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 P.pallidum:56

H3B4T1              	100.00%		D3B5T3              	100.00%
M3XHD4              	90.51%		
H3AJ34              	51.78%		
H3B536              	50.59%		
H3B4T8              	50.20%		
H3ABX5              	20.16%		
H2ZVM0              	8.70%		
H2ZZF8              	6.32%		
Bootstrap support for H3B4T1 as seed ortholog is 97%.
Bootstrap support for D3B5T3 as seed ortholog is 99%.

Group of orthologs #1842. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.pallidum:139

H3AP70              	100.00%		D3BIL3              	100.00%
H3B2N7              	44.13%		
H3AS17              	41.08%		
H3AT85              	36.15%		
Bootstrap support for H3AP70 as seed ortholog is 100%.
Bootstrap support for D3BIL3 as seed ortholog is 100%.

Group of orthologs #1843. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.pallidum:23

M3XHQ3              	100.00%		D3BFQ9              	100.00%
                    	       		D3B8W8              	99.12%
                    	       		D3AYG7              	94.30%
Bootstrap support for M3XHQ3 as seed ortholog is 100%.
Bootstrap support for D3BFQ9 as seed ortholog is 86%.

Group of orthologs #1844. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.pallidum:139

H3B5F5              	100.00%		D3BTY7              	100.00%
H3A2Z1              	44.97%		
H3AS69              	37.76%		
Bootstrap support for H3B5F5 as seed ortholog is 100%.
Bootstrap support for D3BTY7 as seed ortholog is 100%.

Group of orthologs #1845. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.pallidum:139

H3AQN7              	100.00%		D3BM04              	100.00%
H3A7G1              	48.05%		
Bootstrap support for H3AQN7 as seed ortholog is 99%.
Bootstrap support for D3BM04 as seed ortholog is 100%.

Group of orthologs #1846. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.pallidum:139

M3XII1              	100.00%		D3BPE8              	100.00%
H3AX58              	29.47%		
Bootstrap support for M3XII1 as seed ortholog is 100%.
Bootstrap support for D3BPE8 as seed ortholog is 100%.

Group of orthologs #1847. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.pallidum:139

H3AGZ0              	100.00%		D3B9G3              	100.00%
Bootstrap support for H3AGZ0 as seed ortholog is 100%.
Bootstrap support for D3B9G3 as seed ortholog is 100%.

Group of orthologs #1848. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.pallidum:139

H3B5C4              	100.00%		D3B044              	100.00%
Bootstrap support for H3B5C4 as seed ortholog is 100%.
Bootstrap support for D3B044 as seed ortholog is 100%.

Group of orthologs #1849. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.pallidum:139

H3AZ60              	100.00%		D3B645              	100.00%
Bootstrap support for H3AZ60 as seed ortholog is 100%.
Bootstrap support for D3B645 as seed ortholog is 100%.

Group of orthologs #1850. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.pallidum:139

H3BCD0              	100.00%		D3B2R4              	100.00%
Bootstrap support for H3BCD0 as seed ortholog is 100%.
Bootstrap support for D3B2R4 as seed ortholog is 100%.

Group of orthologs #1851. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.pallidum:139

H3ALQ5              	100.00%		D3BSC7              	100.00%
Bootstrap support for H3ALQ5 as seed ortholog is 100%.
Bootstrap support for D3BSC7 as seed ortholog is 100%.

Group of orthologs #1852. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.pallidum:139

H3AWQ0              	100.00%		D3BM86              	100.00%
Bootstrap support for H3AWQ0 as seed ortholog is 100%.
Bootstrap support for D3BM86 as seed ortholog is 100%.

Group of orthologs #1853. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.pallidum:139

M3XJE5              	100.00%		D3B358              	100.00%
Bootstrap support for M3XJE5 as seed ortholog is 100%.
Bootstrap support for D3B358 as seed ortholog is 100%.

Group of orthologs #1854. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 P.pallidum:139

H3BHG0              	100.00%		D3BGL9              	100.00%
Bootstrap support for H3BHG0 as seed ortholog is 100%.
Bootstrap support for D3BGL9 as seed ortholog is 100%.

Group of orthologs #1855. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.pallidum:33

H3BHZ2              	100.00%		D3BGC8              	100.00%
Bootstrap support for H3BHZ2 as seed ortholog is 83%.
Bootstrap support for D3BGC8 as seed ortholog is 75%.

Group of orthologs #1856. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 P.pallidum:138

H2ZSU0              	100.00%		D3BEQ9              	100.00%
H3ATM4              	13.90%		D3BSS6              	77.96%
H3ASV4              	9.13%		
Bootstrap support for H2ZSU0 as seed ortholog is 100%.
Bootstrap support for D3BEQ9 as seed ortholog is 100%.

Group of orthologs #1857. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 P.pallidum:138

H3A4W6              	100.00%		D3B2C2              	100.00%
H3AGY4              	32.03%		
H3AIY2              	14.11%		
Bootstrap support for H3A4W6 as seed ortholog is 100%.
Bootstrap support for D3B2C2 as seed ortholog is 100%.

Group of orthologs #1858. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 P.pallidum:138

H3A455              	100.00%		D3BD80              	100.00%
H3AG94              	88.72%		
Bootstrap support for H3A455 as seed ortholog is 100%.
Bootstrap support for D3BD80 as seed ortholog is 100%.

Group of orthologs #1859. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 P.pallidum:138

H3A3V0              	100.00%		D3BT27              	100.00%
H3B5X7              	61.62%		
Bootstrap support for H3A3V0 as seed ortholog is 100%.
Bootstrap support for D3BT27 as seed ortholog is 100%.

Group of orthologs #1860. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 P.pallidum:44

H3AR29              	100.00%		D3BBT3              	100.00%
H3A4D5              	52.97%		
Bootstrap support for H3AR29 as seed ortholog is 100%.
Bootstrap support for D3BBT3 as seed ortholog is 82%.

Group of orthologs #1861. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 P.pallidum:138

H3AYJ6              	100.00%		D3BJQ2              	100.00%
H3ASY7              	21.84%		
Bootstrap support for H3AYJ6 as seed ortholog is 100%.
Bootstrap support for D3BJQ2 as seed ortholog is 100%.

Group of orthologs #1862. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 P.pallidum:138

H3AUJ1              	100.00%		D3AVV1              	100.00%
Bootstrap support for H3AUJ1 as seed ortholog is 100%.
Bootstrap support for D3AVV1 as seed ortholog is 100%.

Group of orthologs #1863. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 P.pallidum:138

H3BFP8              	100.00%		D3AWD8              	100.00%
Bootstrap support for H3BFP8 as seed ortholog is 100%.
Bootstrap support for D3AWD8 as seed ortholog is 100%.

Group of orthologs #1864. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 P.pallidum:138

H3BGG3              	100.00%		D3AYJ8              	100.00%
Bootstrap support for H3BGG3 as seed ortholog is 100%.
Bootstrap support for D3AYJ8 as seed ortholog is 100%.

Group of orthologs #1865. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 P.pallidum:138

H3BA19              	100.00%		D3B4Y0              	100.00%
Bootstrap support for H3BA19 as seed ortholog is 100%.
Bootstrap support for D3B4Y0 as seed ortholog is 100%.

Group of orthologs #1866. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:5 P.pallidum:138

H3B9M8              	100.00%		D3BKI7              	100.00%
Bootstrap support for H3B9M8 as seed ortholog is 78%.
Bootstrap support for D3BKI7 as seed ortholog is 100%.

Group of orthologs #1867. Best score 137 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.pallidum:137

H3AWL9              	100.00%		D3BFK7              	100.00%
                    	       		D3BLN7              	53.79%
Bootstrap support for H3AWL9 as seed ortholog is 98%.
Bootstrap support for D3BFK7 as seed ortholog is 100%.

Group of orthologs #1868. Best score 137 bits
Score difference with first non-orthologous sequence - L.chalumnae:137 P.pallidum:137

H3B5E5              	100.00%		D3BGS2              	100.00%
H2ZSM3              	18.37%		
Bootstrap support for H3B5E5 as seed ortholog is 100%.
Bootstrap support for D3BGS2 as seed ortholog is 100%.

Group of orthologs #1869. Best score 137 bits
Score difference with first non-orthologous sequence - L.chalumnae:137 P.pallidum:137

H3BAA6              	100.00%		D3BUA1              	100.00%
H3A8E5              	48.67%		
Bootstrap support for H3BAA6 as seed ortholog is 100%.
Bootstrap support for D3BUA1 as seed ortholog is 100%.

Group of orthologs #1870. Best score 137 bits
Score difference with first non-orthologous sequence - L.chalumnae:137 P.pallidum:137

H3A8K9              	100.00%		D3AY36              	100.00%
Bootstrap support for H3A8K9 as seed ortholog is 100%.
Bootstrap support for D3AY36 as seed ortholog is 100%.

Group of orthologs #1871. Best score 137 bits
Score difference with first non-orthologous sequence - L.chalumnae:137 P.pallidum:137

H3AFL5              	100.00%		D3BE41              	100.00%
Bootstrap support for H3AFL5 as seed ortholog is 100%.
Bootstrap support for D3BE41 as seed ortholog is 100%.

Group of orthologs #1872. Best score 137 bits
Score difference with first non-orthologous sequence - L.chalumnae:137 P.pallidum:58

H3B0Q9              	100.00%		D3BMH3              	100.00%
Bootstrap support for H3B0Q9 as seed ortholog is 100%.
Bootstrap support for D3BMH3 as seed ortholog is 99%.

Group of orthologs #1873. Best score 137 bits
Score difference with first non-orthologous sequence - L.chalumnae:137 P.pallidum:137

H3BDX7              	100.00%		D3BCB8              	100.00%
Bootstrap support for H3BDX7 as seed ortholog is 100%.
Bootstrap support for D3BCB8 as seed ortholog is 100%.

Group of orthologs #1874. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 P.pallidum:66

M3XIZ5              	100.00%		D3AW40              	100.00%
H3B7M3              	29.76%		D3B7M2              	25.91%
Bootstrap support for M3XIZ5 as seed ortholog is 100%.
Bootstrap support for D3AW40 as seed ortholog is 56%.
Alternative seed ortholog is D3BAG2 (66 bits away from this cluster)

Group of orthologs #1875. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 P.pallidum:136

H3AJU2              	100.00%		D3B1I7              	100.00%
H3ACY7              	43.55%		
Bootstrap support for H3AJU2 as seed ortholog is 100%.
Bootstrap support for D3B1I7 as seed ortholog is 100%.

Group of orthologs #1876. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 P.pallidum:136

H3A147              	100.00%		D3BQT5              	100.00%
H2ZX94              	39.92%		
Bootstrap support for H3A147 as seed ortholog is 100%.
Bootstrap support for D3BQT5 as seed ortholog is 100%.

Group of orthologs #1877. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 P.pallidum:136

H3B9P1              	100.00%		D3AYE2              	100.00%
H3BG33              	36.28%		
Bootstrap support for H3B9P1 as seed ortholog is 100%.
Bootstrap support for D3AYE2 as seed ortholog is 100%.

Group of orthologs #1878. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 P.pallidum:136

H3A654              	100.00%		D3B500              	100.00%
Bootstrap support for H3A654 as seed ortholog is 100%.
Bootstrap support for D3B500 as seed ortholog is 100%.

Group of orthologs #1879. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 P.pallidum:136

H3A122              	100.00%		D3BD25              	100.00%
Bootstrap support for H3A122 as seed ortholog is 100%.
Bootstrap support for D3BD25 as seed ortholog is 100%.

Group of orthologs #1880. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.pallidum:136

H3A6Y7              	100.00%		D3B9P1              	100.00%
Bootstrap support for H3A6Y7 as seed ortholog is 99%.
Bootstrap support for D3B9P1 as seed ortholog is 100%.

Group of orthologs #1881. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 P.pallidum:89

H3A9S2              	100.00%		D3BAK3              	100.00%
Bootstrap support for H3A9S2 as seed ortholog is 100%.
Bootstrap support for D3BAK3 as seed ortholog is 100%.

Group of orthologs #1882. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 P.pallidum:136

H3A792              	100.00%		D3BDP9              	100.00%
Bootstrap support for H3A792 as seed ortholog is 100%.
Bootstrap support for D3BDP9 as seed ortholog is 100%.

Group of orthologs #1883. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 P.pallidum:136

H3AYT9              	100.00%		D3AW12              	100.00%
Bootstrap support for H3AYT9 as seed ortholog is 100%.
Bootstrap support for D3AW12 as seed ortholog is 100%.

Group of orthologs #1884. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 P.pallidum:136

H3ASN9              	100.00%		D3B3U6              	100.00%
Bootstrap support for H3ASN9 as seed ortholog is 100%.
Bootstrap support for D3B3U6 as seed ortholog is 100%.

Group of orthologs #1885. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 P.pallidum:136

H3BCR1              	100.00%		D3B863              	100.00%
Bootstrap support for H3BCR1 as seed ortholog is 100%.
Bootstrap support for D3B863 as seed ortholog is 100%.

Group of orthologs #1886. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 P.pallidum:136

H3BGN8              	100.00%		D3BKA1              	100.00%
Bootstrap support for H3BGN8 as seed ortholog is 100%.
Bootstrap support for D3BKA1 as seed ortholog is 100%.

Group of orthologs #1887. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 P.pallidum:135

H3AJI6              	100.00%		D3BSP9              	100.00%
H3AV02              	7.70%		
Bootstrap support for H3AJI6 as seed ortholog is 100%.
Bootstrap support for D3BSP9 as seed ortholog is 100%.

Group of orthologs #1888. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.pallidum:18

H3B2D3              	100.00%		D3BJ50              	100.00%
H2ZZQ6              	67.68%		
Bootstrap support for H3B2D3 as seed ortholog is 85%.
Bootstrap support for D3BJ50 as seed ortholog is 66%.
Alternative seed ortholog is D3BAH8 (18 bits away from this cluster)

Group of orthologs #1889. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 P.pallidum:135

H2ZXR7              	100.00%		D3AWE0              	100.00%
Bootstrap support for H2ZXR7 as seed ortholog is 100%.
Bootstrap support for D3AWE0 as seed ortholog is 100%.

Group of orthologs #1890. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 P.pallidum:135

H3A8Q5              	100.00%		D3B8S6              	100.00%
Bootstrap support for H3A8Q5 as seed ortholog is 100%.
Bootstrap support for D3B8S6 as seed ortholog is 100%.

Group of orthologs #1891. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 P.pallidum:135

H3ADD5              	100.00%		D3BPJ7              	100.00%
Bootstrap support for H3ADD5 as seed ortholog is 100%.
Bootstrap support for D3BPJ7 as seed ortholog is 100%.

Group of orthologs #1892. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 P.pallidum:135

H3ANW7              	100.00%		D3BTD9              	100.00%
Bootstrap support for H3ANW7 as seed ortholog is 100%.
Bootstrap support for D3BTD9 as seed ortholog is 100%.

Group of orthologs #1893. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 P.pallidum:135

M3XJJ1              	100.00%		D3BH90              	100.00%
Bootstrap support for M3XJJ1 as seed ortholog is 100%.
Bootstrap support for D3BH90 as seed ortholog is 100%.

Group of orthologs #1894. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 P.pallidum:134

H3ACG2              	100.00%		D3BBI0              	100.00%
Bootstrap support for H3ACG2 as seed ortholog is 100%.
Bootstrap support for D3BBI0 as seed ortholog is 100%.

Group of orthologs #1895. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:32 P.pallidum:134

H3AMH7              	100.00%		D3BFY9              	100.00%
Bootstrap support for H3AMH7 as seed ortholog is 82%.
Bootstrap support for D3BFY9 as seed ortholog is 100%.

Group of orthologs #1896. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 P.pallidum:41

H3AUF1              	100.00%		D3BE02              	100.00%
Bootstrap support for H3AUF1 as seed ortholog is 100%.
Bootstrap support for D3BE02 as seed ortholog is 86%.

Group of orthologs #1897. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.pallidum:134

H3ASU4              	100.00%		D3BGW6              	100.00%
Bootstrap support for H3ASU4 as seed ortholog is 99%.
Bootstrap support for D3BGW6 as seed ortholog is 100%.

Group of orthologs #1898. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 P.pallidum:134

H3B1I6              	100.00%		D3B9I7              	100.00%
Bootstrap support for H3B1I6 as seed ortholog is 100%.
Bootstrap support for D3B9I7 as seed ortholog is 100%.

Group of orthologs #1899. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 P.pallidum:134

H3BHP9              	100.00%		D3BM24              	100.00%
Bootstrap support for H3BHP9 as seed ortholog is 100%.
Bootstrap support for D3BM24 as seed ortholog is 100%.

Group of orthologs #1900. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 P.pallidum:66

H3A1E3              	100.00%		D3BRH3              	100.00%
H3A8P7              	100.00%		
H3ARX0              	79.88%		
H3A6Y0              	78.55%		
H3B362              	78.44%		
H2ZY22              	78.44%		
H3B7L0              	78.22%		
H3AQ33              	74.70%		
H3AH25              	74.26%		
H3BEN4              	72.94%		
H2ZY19              	67.55%		
H3B6R6              	62.82%		
H3AF17              	58.53%		
H2ZT93              	52.37%		
H3ARV4              	48.65%		
H3A927              	40.04%		
H3AUA9              	35.64%		
H2ZTQ3              	26.23%		
H3A5U7              	17.49%		
H2ZWK5              	14.11%		
H3BEL7              	13.75%		
H2ZXV7              	11.99%		
H3AZN4              	11.91%		
H3B8Q5              	5.81%		
H2ZWC6              	5.21%		
H3ADV8              	5.11%		
Bootstrap support for H3A1E3 as seed ortholog is 98%.
Bootstrap support for H3A8P7 as seed ortholog is 99%.
Bootstrap support for D3BRH3 as seed ortholog is 90%.

Group of orthologs #1901. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:29 P.pallidum:133

H3A3U4              	100.00%		D3BH99              	100.00%
H3ADN4              	5.77%		D3B1C3              	7.02%
Bootstrap support for H3A3U4 as seed ortholog is 95%.
Bootstrap support for D3BH99 as seed ortholog is 100%.

Group of orthologs #1902. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 P.pallidum:133

H3A7E3              	100.00%		D3B1E7              	100.00%
                    	       		D3BUI2              	14.57%
Bootstrap support for H3A7E3 as seed ortholog is 100%.
Bootstrap support for D3B1E7 as seed ortholog is 100%.

Group of orthologs #1903. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.pallidum:133

H2ZVJ6              	100.00%		D3BB70              	100.00%
Bootstrap support for H2ZVJ6 as seed ortholog is 99%.
Bootstrap support for D3BB70 as seed ortholog is 100%.

Group of orthologs #1904. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 P.pallidum:133

H3A449              	100.00%		D3B413              	100.00%
Bootstrap support for H3A449 as seed ortholog is 100%.
Bootstrap support for D3B413 as seed ortholog is 100%.

Group of orthologs #1905. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 P.pallidum:133

H3A2P6              	100.00%		D3BIS0              	100.00%
Bootstrap support for H3A2P6 as seed ortholog is 100%.
Bootstrap support for D3BIS0 as seed ortholog is 100%.

Group of orthologs #1906. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 P.pallidum:133

H3AE57              	100.00%		D3BKJ2              	100.00%
Bootstrap support for H3AE57 as seed ortholog is 100%.
Bootstrap support for D3BKJ2 as seed ortholog is 100%.

Group of orthologs #1907. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 P.pallidum:133

H3AWI1              	100.00%		D3BD13              	100.00%
Bootstrap support for H3AWI1 as seed ortholog is 100%.
Bootstrap support for D3BD13 as seed ortholog is 100%.

Group of orthologs #1908. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 P.pallidum:133

H3AQX8              	100.00%		D3BTS2              	100.00%
Bootstrap support for H3AQX8 as seed ortholog is 100%.
Bootstrap support for D3BTS2 as seed ortholog is 100%.

Group of orthologs #1909. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 P.pallidum:133

H3BGM4              	100.00%		D3B767              	100.00%
Bootstrap support for H3BGM4 as seed ortholog is 100%.
Bootstrap support for D3B767 as seed ortholog is 100%.

Group of orthologs #1910. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 P.pallidum:133

H3AZJ2              	100.00%		D3BU88              	100.00%
Bootstrap support for H3AZJ2 as seed ortholog is 100%.
Bootstrap support for D3BU88 as seed ortholog is 100%.

Group of orthologs #1911. Best score 132 bits
Score difference with first non-orthologous sequence - L.chalumnae:8 P.pallidum:42

H3B355              	100.00%		D3BHM9              	100.00%
                    	       		D3AXC7              	28.45%
Bootstrap support for H3B355 as seed ortholog is 59%.
Alternative seed ortholog is H3AXS7 (8 bits away from this cluster)
Bootstrap support for D3BHM9 as seed ortholog is 90%.

Group of orthologs #1912. Best score 132 bits
Score difference with first non-orthologous sequence - L.chalumnae:132 P.pallidum:132

M3XHZ0              	100.00%		D3BPZ5              	100.00%
                    	       		D3B2H0              	37.27%
Bootstrap support for M3XHZ0 as seed ortholog is 100%.
Bootstrap support for D3BPZ5 as seed ortholog is 100%.

Group of orthologs #1913. Best score 132 bits
Score difference with first non-orthologous sequence - L.chalumnae:132 P.pallidum:132

H3A5B6              	100.00%		D3AXV8              	100.00%
Bootstrap support for H3A5B6 as seed ortholog is 100%.
Bootstrap support for D3AXV8 as seed ortholog is 100%.

Group of orthologs #1914. Best score 132 bits
Score difference with first non-orthologous sequence - L.chalumnae:132 P.pallidum:132

H3A2B8              	100.00%		D3BN22              	100.00%
Bootstrap support for H3A2B8 as seed ortholog is 100%.
Bootstrap support for D3BN22 as seed ortholog is 100%.

Group of orthologs #1915. Best score 132 bits
Score difference with first non-orthologous sequence - L.chalumnae:132 P.pallidum:132

H3AUA2              	100.00%		D3B6L2              	100.00%
Bootstrap support for H3AUA2 as seed ortholog is 100%.
Bootstrap support for D3B6L2 as seed ortholog is 100%.

Group of orthologs #1916. Best score 132 bits
Score difference with first non-orthologous sequence - L.chalumnae:15 P.pallidum:2

H3B873              	100.00%		D3B2T3              	100.00%
Bootstrap support for H3B873 as seed ortholog is 65%.
Alternative seed ortholog is H3B5X1 (15 bits away from this cluster)
Bootstrap support for D3B2T3 as seed ortholog is 52%.
Alternative seed ortholog is D3B478 (2 bits away from this cluster)

Group of orthologs #1917. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:9 P.pallidum:131

H2ZZM7              	100.00%		D3AXZ7              	100.00%
M3XIF3              	55.86%		D3BPS2              	5.72%
H2ZSV9              	29.99%		D3BBI3              	5.11%
Bootstrap support for H2ZZM7 as seed ortholog is 55%.
Alternative seed ortholog is H3B6Q4 (9 bits away from this cluster)
Bootstrap support for D3AXZ7 as seed ortholog is 100%.

Group of orthologs #1918. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 P.pallidum:131

H2ZWR6              	100.00%		D3BA42              	100.00%
H3A574              	54.43%		D3B6J8              	14.44%
                    	       		D3AY58              	13.04%
Bootstrap support for H2ZWR6 as seed ortholog is 100%.
Bootstrap support for D3BA42 as seed ortholog is 100%.

Group of orthologs #1919. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 P.pallidum:131

H3APE2              	100.00%		D3AVZ3              	100.00%
H3BEX4              	50.99%		
Bootstrap support for H3APE2 as seed ortholog is 99%.
Bootstrap support for D3AVZ3 as seed ortholog is 100%.

Group of orthologs #1920. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 P.pallidum:131

H3AT15              	100.00%		D3BJG7              	100.00%
H3AAF7              	14.89%		
Bootstrap support for H3AT15 as seed ortholog is 100%.
Bootstrap support for D3BJG7 as seed ortholog is 100%.

Group of orthologs #1921. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 P.pallidum:131

H3A3A7              	100.00%		D3B0P0              	100.00%
Bootstrap support for H3A3A7 as seed ortholog is 100%.
Bootstrap support for D3B0P0 as seed ortholog is 100%.

Group of orthologs #1922. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:10 P.pallidum:44

H2ZSW2              	100.00%		D3BAQ8              	100.00%
Bootstrap support for H2ZSW2 as seed ortholog is 60%.
Alternative seed ortholog is H3B6E9 (10 bits away from this cluster)
Bootstrap support for D3BAQ8 as seed ortholog is 90%.

Group of orthologs #1923. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 P.pallidum:131

H3AUK5              	100.00%		D3B6V9              	100.00%
Bootstrap support for H3AUK5 as seed ortholog is 100%.
Bootstrap support for D3B6V9 as seed ortholog is 100%.

Group of orthologs #1924. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 P.pallidum:131

H3ALE2              	100.00%		D3BKA2              	100.00%
Bootstrap support for H3ALE2 as seed ortholog is 100%.
Bootstrap support for D3BKA2 as seed ortholog is 100%.

Group of orthologs #1925. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 P.pallidum:131

H3AEM3              	100.00%		D3BVM6              	100.00%
Bootstrap support for H3AEM3 as seed ortholog is 100%.
Bootstrap support for D3BVM6 as seed ortholog is 100%.

Group of orthologs #1926. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 P.pallidum:131

H3BC02              	100.00%		D3B7N4              	100.00%
Bootstrap support for H3BC02 as seed ortholog is 99%.
Bootstrap support for D3B7N4 as seed ortholog is 100%.

Group of orthologs #1927. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 P.pallidum:50

H3B5Q5              	100.00%		D3BHK9              	100.00%
Bootstrap support for H3B5Q5 as seed ortholog is 100%.
Bootstrap support for D3BHK9 as seed ortholog is 83%.

Group of orthologs #1928. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 P.pallidum:83

H3AX79              	100.00%		D3BSQ1              	100.00%
Bootstrap support for H3AX79 as seed ortholog is 100%.
Bootstrap support for D3BSQ1 as seed ortholog is 99%.

Group of orthologs #1929. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.pallidum:131

H3BB15              	100.00%		D3BIU2              	100.00%
Bootstrap support for H3BB15 as seed ortholog is 97%.
Bootstrap support for D3BIU2 as seed ortholog is 100%.

Group of orthologs #1930. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 P.pallidum:131

H3BIN1              	100.00%		D3BCH8              	100.00%
Bootstrap support for H3BIN1 as seed ortholog is 100%.
Bootstrap support for D3BCH8 as seed ortholog is 100%.

Group of orthologs #1931. Best score 130 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 P.pallidum:130

H3B3W9              	100.00%		D3BNA0              	100.00%
                    	       		D3BN36              	48.96%
                    	       		D3AW27              	43.10%
                    	       		D3BG51              	26.22%
                    	       		D3BGG7              	11.50%
                    	       		D3BTL3              	11.01%
                    	       		D3BTL2              	10.99%
                    	       		D3BVG8              	8.02%
                    	       		D3BLT2              	5.94%
                    	       		D3B223              	5.63%
Bootstrap support for H3B3W9 as seed ortholog is 100%.
Bootstrap support for D3BNA0 as seed ortholog is 100%.

Group of orthologs #1932. Best score 130 bits
Score difference with first non-orthologous sequence - L.chalumnae:36 P.pallidum:130

H3A834              	100.00%		D3BGV1              	100.00%
H3A0G1              	16.99%		
H3BCY4              	13.97%		
H3BF75              	7.94%		
H3A9Q2              	6.18%		
Bootstrap support for H3A834 as seed ortholog is 96%.
Bootstrap support for D3BGV1 as seed ortholog is 100%.

Group of orthologs #1933. Best score 130 bits
Score difference with first non-orthologous sequence - L.chalumnae:11 P.pallidum:56

H3A2W4              	100.00%		D3BIK0              	100.00%
H3B4R1              	31.51%		D3BKN5              	12.11%
H3B4T9              	30.46%		
Bootstrap support for H3A2W4 as seed ortholog is 62%.
Alternative seed ortholog is H3BHD0 (11 bits away from this cluster)
Bootstrap support for D3BIK0 as seed ortholog is 95%.

Group of orthologs #1934. Best score 130 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 P.pallidum:130

H3A0T0              	100.00%		D3AZF8              	100.00%
Bootstrap support for H3A0T0 as seed ortholog is 100%.
Bootstrap support for D3AZF8 as seed ortholog is 100%.

Group of orthologs #1935. Best score 130 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 P.pallidum:130

H3ALW3              	100.00%		D3B0H9              	100.00%
Bootstrap support for H3ALW3 as seed ortholog is 100%.
Bootstrap support for D3B0H9 as seed ortholog is 100%.

Group of orthologs #1936. Best score 130 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 P.pallidum:130

H3A5B8              	100.00%		D3BK63              	100.00%
Bootstrap support for H3A5B8 as seed ortholog is 100%.
Bootstrap support for D3BK63 as seed ortholog is 100%.

Group of orthologs #1937. Best score 130 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 P.pallidum:130

H3B844              	100.00%		D3BJT7              	100.00%
Bootstrap support for H3B844 as seed ortholog is 100%.
Bootstrap support for D3BJT7 as seed ortholog is 100%.

Group of orthologs #1938. Best score 129 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.pallidum:76

H3AAV3              	100.00%		D3BI78              	100.00%
M3XIP7              	40.47%		D3BCG7              	8.02%
Bootstrap support for H3AAV3 as seed ortholog is 95%.
Bootstrap support for D3BI78 as seed ortholog is 99%.

Group of orthologs #1939. Best score 129 bits
Score difference with first non-orthologous sequence - L.chalumnae:129 P.pallidum:129

M3XL91              	100.00%		D3B1G8              	100.00%
H3AUZ6              	61.25%		
Bootstrap support for M3XL91 as seed ortholog is 100%.
Bootstrap support for D3B1G8 as seed ortholog is 100%.

Group of orthologs #1940. Best score 129 bits
Score difference with first non-orthologous sequence - L.chalumnae:129 P.pallidum:129

H2ZTX4              	100.00%		D3B6E4              	100.00%
Bootstrap support for H2ZTX4 as seed ortholog is 100%.
Bootstrap support for D3B6E4 as seed ortholog is 100%.

Group of orthologs #1941. Best score 129 bits
Score difference with first non-orthologous sequence - L.chalumnae:129 P.pallidum:129

H3A6T8              	100.00%		D3AVI7              	100.00%
Bootstrap support for H3A6T8 as seed ortholog is 100%.
Bootstrap support for D3AVI7 as seed ortholog is 100%.

Group of orthologs #1942. Best score 129 bits
Score difference with first non-orthologous sequence - L.chalumnae:129 P.pallidum:129

H3A519              	100.00%		D3B9Y5              	100.00%
Bootstrap support for H3A519 as seed ortholog is 100%.
Bootstrap support for D3B9Y5 as seed ortholog is 100%.

Group of orthologs #1943. Best score 129 bits
Score difference with first non-orthologous sequence - L.chalumnae:129 P.pallidum:129

H3APP2              	100.00%		D3AYD3              	100.00%
Bootstrap support for H3APP2 as seed ortholog is 100%.
Bootstrap support for D3AYD3 as seed ortholog is 100%.

Group of orthologs #1944. Best score 129 bits
Score difference with first non-orthologous sequence - L.chalumnae:129 P.pallidum:53

H3ADQ0              	100.00%		D3BGB8              	100.00%
Bootstrap support for H3ADQ0 as seed ortholog is 100%.
Bootstrap support for D3BGB8 as seed ortholog is 89%.

Group of orthologs #1945. Best score 129 bits
Score difference with first non-orthologous sequence - L.chalumnae:28 P.pallidum:34

H3AY74              	100.00%		D3B1P2              	100.00%
Bootstrap support for H3AY74 as seed ortholog is 99%.
Bootstrap support for D3B1P2 as seed ortholog is 86%.

Group of orthologs #1946. Best score 129 bits
Score difference with first non-orthologous sequence - L.chalumnae:129 P.pallidum:129

H3AHD2              	100.00%		D3BIP8              	100.00%
Bootstrap support for H3AHD2 as seed ortholog is 100%.
Bootstrap support for D3BIP8 as seed ortholog is 100%.

Group of orthologs #1947. Best score 129 bits
Score difference with first non-orthologous sequence - L.chalumnae:129 P.pallidum:129

H3AVH6              	100.00%		D3BBQ4              	100.00%
Bootstrap support for H3AVH6 as seed ortholog is 100%.
Bootstrap support for D3BBQ4 as seed ortholog is 100%.

Group of orthologs #1948. Best score 129 bits
Score difference with first non-orthologous sequence - L.chalumnae:129 P.pallidum:129

H3AJT2              	100.00%		D3BSK0              	100.00%
Bootstrap support for H3AJT2 as seed ortholog is 100%.
Bootstrap support for D3BSK0 as seed ortholog is 100%.

Group of orthologs #1949. Best score 129 bits
Score difference with first non-orthologous sequence - L.chalumnae:129 P.pallidum:129

H3B6Q5              	100.00%		D3BU06              	100.00%
Bootstrap support for H3B6Q5 as seed ortholog is 100%.
Bootstrap support for D3BU06 as seed ortholog is 100%.

Group of orthologs #1950. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:46 P.pallidum:128

H3AMZ8              	100.00%		D3BFU0              	100.00%
H3AE94              	42.14%		D3B903              	42.56%
H2ZUM7              	6.11%		
Bootstrap support for H3AMZ8 as seed ortholog is 91%.
Bootstrap support for D3BFU0 as seed ortholog is 100%.

Group of orthologs #1951. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 P.pallidum:128

H3A4K3              	100.00%		D3AX80              	100.00%
H3APJ2              	47.09%		
Bootstrap support for H3A4K3 as seed ortholog is 100%.
Bootstrap support for D3AX80 as seed ortholog is 100%.

Group of orthologs #1952. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:3 P.pallidum:128

H3AWP3              	100.00%		D3B4Y1              	100.00%
                    	       		D3B1R8              	7.91%
Bootstrap support for H3AWP3 as seed ortholog is 45%.
Alternative seed ortholog is H3B1C5 (3 bits away from this cluster)
Bootstrap support for D3B4Y1 as seed ortholog is 100%.

Group of orthologs #1953. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 P.pallidum:128

H3ANK0              	100.00%		D3AYJ3              	100.00%
Bootstrap support for H3ANK0 as seed ortholog is 100%.
Bootstrap support for D3AYJ3 as seed ortholog is 100%.

Group of orthologs #1954. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 P.pallidum:128

H3A273              	100.00%		D3BM26              	100.00%
Bootstrap support for H3A273 as seed ortholog is 100%.
Bootstrap support for D3BM26 as seed ortholog is 100%.

Group of orthologs #1955. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 P.pallidum:128

H3ATE1              	100.00%		D3B2W6              	100.00%
Bootstrap support for H3ATE1 as seed ortholog is 100%.
Bootstrap support for D3B2W6 as seed ortholog is 100%.

Group of orthologs #1956. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 P.pallidum:128

H3AVA0              	100.00%		D3B3Z8              	100.00%
Bootstrap support for H3AVA0 as seed ortholog is 100%.
Bootstrap support for D3B3Z8 as seed ortholog is 100%.

Group of orthologs #1957. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 P.pallidum:128

H3B591              	100.00%		D3B613              	100.00%
Bootstrap support for H3B591 as seed ortholog is 100%.
Bootstrap support for D3B613 as seed ortholog is 100%.

Group of orthologs #1958. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 P.pallidum:128

H3ALQ0              	100.00%		D3BNL3              	100.00%
Bootstrap support for H3ALQ0 as seed ortholog is 100%.
Bootstrap support for D3BNL3 as seed ortholog is 100%.

Group of orthologs #1959. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 P.pallidum:127

H3A6R6              	100.00%		D3AWZ4              	100.00%
H3AVP7              	13.88%		D3BVM7              	13.72%
H3AXB5              	5.04%		D3BVM8              	12.20%
Bootstrap support for H3A6R6 as seed ortholog is 100%.
Bootstrap support for D3AWZ4 as seed ortholog is 100%.

Group of orthologs #1960. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 P.pallidum:56

H3AY61              	100.00%		D3AZF2              	100.00%
H3AFA3              	38.73%		D3BNF0              	11.75%
Bootstrap support for H3AY61 as seed ortholog is 89%.
Bootstrap support for D3AZF2 as seed ortholog is 87%.

Group of orthologs #1961. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:36 P.pallidum:44

H3B1X8              	100.00%		D3BQP6              	100.00%
                    	       		D3BQQ1              	48.17%
                    	       		D3BQQ0              	46.02%
Bootstrap support for H3B1X8 as seed ortholog is 89%.
Bootstrap support for D3BQP6 as seed ortholog is 95%.

Group of orthologs #1962. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 P.pallidum:127

H3A836              	100.00%		D3B0E6              	100.00%
H2ZV61              	63.04%		
Bootstrap support for H3A836 as seed ortholog is 100%.
Bootstrap support for D3B0E6 as seed ortholog is 100%.

Group of orthologs #1963. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 P.pallidum:127

H3AKS5              	100.00%		D3BTD2              	100.00%
H3AHV2              	29.17%		
Bootstrap support for H3AKS5 as seed ortholog is 100%.
Bootstrap support for D3BTD2 as seed ortholog is 100%.

Group of orthologs #1964. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 P.pallidum:127

H3BC29              	100.00%		D3BAG7              	100.00%
H3ANA9              	29.30%		
Bootstrap support for H3BC29 as seed ortholog is 100%.
Bootstrap support for D3BAG7 as seed ortholog is 100%.

Group of orthologs #1965. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 P.pallidum:127

H3ABA0              	100.00%		D3B439              	100.00%
Bootstrap support for H3ABA0 as seed ortholog is 99%.
Bootstrap support for D3B439 as seed ortholog is 100%.

Group of orthologs #1966. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 P.pallidum:127

H3A256              	100.00%		D3BLE4              	100.00%
Bootstrap support for H3A256 as seed ortholog is 100%.
Bootstrap support for D3BLE4 as seed ortholog is 100%.

Group of orthologs #1967. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 P.pallidum:127

H3APA4              	100.00%		D3BRM1              	100.00%
Bootstrap support for H3APA4 as seed ortholog is 100%.
Bootstrap support for D3BRM1 as seed ortholog is 100%.

Group of orthologs #1968. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 P.pallidum:127

M3XGZ9              	100.00%		D3B3P7              	100.00%
Bootstrap support for M3XGZ9 as seed ortholog is 100%.
Bootstrap support for D3B3P7 as seed ortholog is 100%.

Group of orthologs #1969. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.pallidum:63

H3B7W4              	100.00%		D3BSB7              	100.00%
Bootstrap support for H3B7W4 as seed ortholog is 95%.
Bootstrap support for D3BSB7 as seed ortholog is 96%.

Group of orthologs #1970. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 P.pallidum:5

H3AL96              	100.00%		D3BTX2              	100.00%
H3AEV3              	52.85%		
H3B623              	31.40%		
Bootstrap support for H3AL96 as seed ortholog is 100%.
Bootstrap support for D3BTX2 as seed ortholog is 49%.
Alternative seed ortholog is D3B1Z5 (5 bits away from this cluster)

Group of orthologs #1971. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:12 P.pallidum:126

H3AQ09              	100.00%		D3B8Q0              	100.00%
H3ABM0              	41.53%		
Bootstrap support for H3AQ09 as seed ortholog is 62%.
Alternative seed ortholog is H3AT93 (12 bits away from this cluster)
Bootstrap support for D3B8Q0 as seed ortholog is 100%.

Group of orthologs #1972. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 P.pallidum:126

H3AY51              	100.00%		D3B214              	100.00%
H3AYT8              	25.08%		
Bootstrap support for H3AY51 as seed ortholog is 100%.
Bootstrap support for D3B214 as seed ortholog is 100%.

Group of orthologs #1973. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 P.pallidum:126

H3A3W0              	100.00%		D3BE55              	100.00%
Bootstrap support for H3A3W0 as seed ortholog is 100%.
Bootstrap support for D3BE55 as seed ortholog is 100%.

Group of orthologs #1974. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 P.pallidum:126

H2ZXJ0              	100.00%		D3BQY5              	100.00%
Bootstrap support for H2ZXJ0 as seed ortholog is 100%.
Bootstrap support for D3BQY5 as seed ortholog is 100%.

Group of orthologs #1975. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.pallidum:126

H3A0Q1              	100.00%		D3BRL9              	100.00%
Bootstrap support for H3A0Q1 as seed ortholog is 97%.
Bootstrap support for D3BRL9 as seed ortholog is 100%.

Group of orthologs #1976. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 P.pallidum:126

H3AWK8              	100.00%		D3B6F9              	100.00%
Bootstrap support for H3AWK8 as seed ortholog is 100%.
Bootstrap support for D3B6F9 as seed ortholog is 100%.

Group of orthologs #1977. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:28 P.pallidum:126

H3APT4              	100.00%		D3BV55              	100.00%
Bootstrap support for H3APT4 as seed ortholog is 92%.
Bootstrap support for D3BV55 as seed ortholog is 100%.

Group of orthologs #1978. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 P.pallidum:126

M3XLI1              	100.00%		D3B5G3              	100.00%
Bootstrap support for M3XLI1 as seed ortholog is 100%.
Bootstrap support for D3B5G3 as seed ortholog is 100%.

Group of orthologs #1979. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 P.pallidum:125

H3AMA9              	100.00%		D3BCG9              	100.00%
M3XGM8              	24.48%		
Bootstrap support for H3AMA9 as seed ortholog is 100%.
Bootstrap support for D3BCG9 as seed ortholog is 100%.

Group of orthologs #1980. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:26 P.pallidum:24

H3ALR7              	100.00%		D3BLM3              	100.00%
M3XKV3              	27.58%		
Bootstrap support for H3ALR7 as seed ortholog is 70%.
Alternative seed ortholog is H3B498 (26 bits away from this cluster)
Bootstrap support for D3BLM3 as seed ortholog is 89%.

Group of orthologs #1981. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 P.pallidum:125

H3ARE2              	100.00%		D3BP66              	100.00%
H3ABV3              	23.62%		
Bootstrap support for H3ARE2 as seed ortholog is 100%.
Bootstrap support for D3BP66 as seed ortholog is 100%.

Group of orthologs #1982. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 P.pallidum:125

H3BDT2              	100.00%		D3BIA2              	100.00%
H3ACG9              	49.60%		
Bootstrap support for H3BDT2 as seed ortholog is 100%.
Bootstrap support for D3BIA2 as seed ortholog is 100%.

Group of orthologs #1983. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 P.pallidum:125

H2ZXG7              	100.00%		D3B5T6              	100.00%
Bootstrap support for H2ZXG7 as seed ortholog is 100%.
Bootstrap support for D3B5T6 as seed ortholog is 100%.

Group of orthologs #1984. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.pallidum:125

H3AJZ9              	100.00%		D3BEB9              	100.00%
Bootstrap support for H3AJZ9 as seed ortholog is 100%.
Bootstrap support for D3BEB9 as seed ortholog is 100%.

Group of orthologs #1985. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 P.pallidum:125

H3AYA1              	100.00%		D3BL39              	100.00%
Bootstrap support for H3AYA1 as seed ortholog is 100%.
Bootstrap support for D3BL39 as seed ortholog is 100%.

Group of orthologs #1986. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.pallidum:124

H3AX93              	100.00%		D3BAZ9              	100.00%
H3B7H7              	55.83%		
H3AZZ9              	17.50%		
Bootstrap support for H3AX93 as seed ortholog is 100%.
Bootstrap support for D3BAZ9 as seed ortholog is 100%.

Group of orthologs #1987. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.pallidum:124

H3AS08              	100.00%		D3BFR6              	100.00%
                    	       		D3BRT3              	13.95%
Bootstrap support for H3AS08 as seed ortholog is 100%.
Bootstrap support for D3BFR6 as seed ortholog is 100%.

Group of orthologs #1988. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:41 P.pallidum:20

H3BHJ0              	100.00%		D3BEF7              	100.00%
H3AJB9              	68.86%		
Bootstrap support for H3BHJ0 as seed ortholog is 84%.
Bootstrap support for D3BEF7 as seed ortholog is 70%.
Alternative seed ortholog is D3BDG1 (20 bits away from this cluster)

Group of orthologs #1989. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.pallidum:124

H3BBT6              	100.00%		D3BMF1              	100.00%
H3BBF5              	57.31%		
Bootstrap support for H3BBT6 as seed ortholog is 91%.
Bootstrap support for D3BMF1 as seed ortholog is 100%.

Group of orthologs #1990. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.pallidum:124

H3ALI4              	100.00%		D3BEI5              	100.00%
Bootstrap support for H3ALI4 as seed ortholog is 100%.
Bootstrap support for D3BEI5 as seed ortholog is 100%.

Group of orthologs #1991. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.pallidum:124

H3B856              	100.00%		D3AW71              	100.00%
Bootstrap support for H3B856 as seed ortholog is 100%.
Bootstrap support for D3AW71 as seed ortholog is 100%.

Group of orthologs #1992. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.pallidum:124

H3APJ6              	100.00%		D3BF45              	100.00%
Bootstrap support for H3APJ6 as seed ortholog is 100%.
Bootstrap support for D3BF45 as seed ortholog is 100%.

Group of orthologs #1993. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.pallidum:124

H3ADU3              	100.00%		D3BUQ1              	100.00%
Bootstrap support for H3ADU3 as seed ortholog is 100%.
Bootstrap support for D3BUQ1 as seed ortholog is 100%.

Group of orthologs #1994. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.pallidum:124

H3BDG7              	100.00%		D3B449              	100.00%
Bootstrap support for H3BDG7 as seed ortholog is 100%.
Bootstrap support for D3B449 as seed ortholog is 100%.

Group of orthologs #1995. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.pallidum:124

H3B6V2              	100.00%		D3BEM0              	100.00%
Bootstrap support for H3B6V2 as seed ortholog is 100%.
Bootstrap support for D3BEM0 as seed ortholog is 100%.

Group of orthologs #1996. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.pallidum:124

H3AW82              	100.00%		D3BR67              	100.00%
Bootstrap support for H3AW82 as seed ortholog is 100%.
Bootstrap support for D3BR67 as seed ortholog is 100%.

Group of orthologs #1997. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.pallidum:124

H3B923              	100.00%		D3BGQ4              	100.00%
Bootstrap support for H3B923 as seed ortholog is 100%.
Bootstrap support for D3BGQ4 as seed ortholog is 100%.

Group of orthologs #1998. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.pallidum:124

H3BF53              	100.00%		D3BGP2              	100.00%
Bootstrap support for H3BF53 as seed ortholog is 100%.
Bootstrap support for D3BGP2 as seed ortholog is 100%.

Group of orthologs #1999. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 P.pallidum:124

H3BIC3              	100.00%		D3BL88              	100.00%
Bootstrap support for H3BIC3 as seed ortholog is 100%.
Bootstrap support for D3BL88 as seed ortholog is 100%.

Group of orthologs #2000. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 P.pallidum:43

H3B9U4              	100.00%		D3B9J2              	100.00%
H3AEI9              	42.19%		
H3ABR7              	22.82%		
H3BDG0              	16.87%		
Bootstrap support for H3B9U4 as seed ortholog is 100%.
Bootstrap support for D3B9J2 as seed ortholog is 98%.

Group of orthologs #2001. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 P.pallidum:123

H3BB58              	100.00%		D3AXP2              	100.00%
H2ZU61              	51.43%		
H3B771              	32.18%		
Bootstrap support for H3BB58 as seed ortholog is 100%.
Bootstrap support for D3AXP2 as seed ortholog is 100%.

Group of orthologs #2002. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 P.pallidum:123

H3BCY5              	100.00%		D3B194              	100.00%
H3B7H9              	67.83%		
Bootstrap support for H3BCY5 as seed ortholog is 100%.
Bootstrap support for D3B194 as seed ortholog is 100%.

Group of orthologs #2003. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 P.pallidum:123

H2ZVF3              	100.00%		D3BDF5              	100.00%
Bootstrap support for H2ZVF3 as seed ortholog is 100%.
Bootstrap support for D3BDF5 as seed ortholog is 100%.

Group of orthologs #2004. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 P.pallidum:123

H3A1G3              	100.00%		D3BKZ3              	100.00%
Bootstrap support for H3A1G3 as seed ortholog is 99%.
Bootstrap support for D3BKZ3 as seed ortholog is 100%.

Group of orthologs #2005. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 P.pallidum:123

H3BA70              	100.00%		D3B733              	100.00%
Bootstrap support for H3BA70 as seed ortholog is 100%.
Bootstrap support for D3B733 as seed ortholog is 100%.

Group of orthologs #2006. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 P.pallidum:123

H3BH21              	100.00%		D3B1E5              	100.00%
Bootstrap support for H3BH21 as seed ortholog is 100%.
Bootstrap support for D3B1E5 as seed ortholog is 100%.

Group of orthologs #2007. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 P.pallidum:123

H3BFN3              	100.00%		D3BN40              	100.00%
Bootstrap support for H3BFN3 as seed ortholog is 100%.
Bootstrap support for D3BN40 as seed ortholog is 100%.

Group of orthologs #2008. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 P.pallidum:123

H3BEY2              	100.00%		D3BT37              	100.00%
Bootstrap support for H3BEY2 as seed ortholog is 96%.
Bootstrap support for D3BT37 as seed ortholog is 100%.

Group of orthologs #2009. Best score 122 bits
Score difference with first non-orthologous sequence - L.chalumnae:122 P.pallidum:0

H3AZP8              	100.00%		D3BTP2              	100.00%
H3BA09              	50.00%		
H3BG46              	30.09%		
H3A0J1              	26.65%		
H3A5S8              	26.26%		
H3AFX2              	17.38%		
H3B3L0              	16.92%		
H3B4M1              	15.24%		
H3A7U2              	5.51%		
H3B0D5              	5.44%		
H3A9P5              	5.21%		
Bootstrap support for H3AZP8 as seed ortholog is 100%.
Bootstrap support for D3BTP2 as seed ortholog is 54%.
Alternative seed ortholog is D3B6H5 (0 bits away from this cluster)

Group of orthologs #2010. Best score 122 bits
Score difference with first non-orthologous sequence - L.chalumnae:122 P.pallidum:122

H3AR05              	100.00%		D3B5A6              	100.00%
H3ASA0              	5.57%		
Bootstrap support for H3AR05 as seed ortholog is 100%.
Bootstrap support for D3B5A6 as seed ortholog is 100%.

Group of orthologs #2011. Best score 122 bits
Score difference with first non-orthologous sequence - L.chalumnae:122 P.pallidum:66

H3BEJ8              	100.00%		D3BR70              	100.00%
H3AZS8              	22.40%		
Bootstrap support for H3BEJ8 as seed ortholog is 100%.
Bootstrap support for D3BR70 as seed ortholog is 99%.

Group of orthologs #2012. Best score 122 bits
Score difference with first non-orthologous sequence - L.chalumnae:122 P.pallidum:122

H2ZUF5              	100.00%		D3BAZ2              	100.00%
Bootstrap support for H2ZUF5 as seed ortholog is 100%.
Bootstrap support for D3BAZ2 as seed ortholog is 100%.

Group of orthologs #2013. Best score 122 bits
Score difference with first non-orthologous sequence - L.chalumnae:122 P.pallidum:122

H3B4N5              	100.00%		D3B8Y6              	100.00%
Bootstrap support for H3B4N5 as seed ortholog is 100%.
Bootstrap support for D3B8Y6 as seed ortholog is 100%.

Group of orthologs #2014. Best score 122 bits
Score difference with first non-orthologous sequence - L.chalumnae:122 P.pallidum:122

H3ASD7              	100.00%		D3BM28              	100.00%
Bootstrap support for H3ASD7 as seed ortholog is 100%.
Bootstrap support for D3BM28 as seed ortholog is 100%.

Group of orthologs #2015. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 P.pallidum:121

H3B8N0              	100.00%		D3BTM8              	100.00%
H3BE02              	78.57%		
H3A6T6              	72.14%		
H3A0A2              	66.43%		
H3A8X0              	29.29%		
Bootstrap support for H3B8N0 as seed ortholog is 100%.
Bootstrap support for D3BTM8 as seed ortholog is 100%.

Group of orthologs #2016. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 P.pallidum:29

M3XHK2              	100.00%		D3B2P8              	100.00%
H3A224              	38.95%		
H3A7F7              	20.94%		
Bootstrap support for M3XHK2 as seed ortholog is 100%.
Bootstrap support for D3B2P8 as seed ortholog is 51%.
Alternative seed ortholog is D3BEQ1 (29 bits away from this cluster)

Group of orthologs #2017. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:14 P.pallidum:121

H2ZZA5              	100.00%		D3BMB1              	100.00%
H3AB04              	35.09%		
Bootstrap support for H2ZZA5 as seed ortholog is 65%.
Alternative seed ortholog is H3B1C5 (14 bits away from this cluster)
Bootstrap support for D3BMB1 as seed ortholog is 100%.

Group of orthologs #2018. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 P.pallidum:121

H3AQW8              	100.00%		D3B8N6              	100.00%
H2ZT41              	25.08%		
Bootstrap support for H3AQW8 as seed ortholog is 100%.
Bootstrap support for D3B8N6 as seed ortholog is 100%.

Group of orthologs #2019. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 P.pallidum:121

H3BAR8              	100.00%		D3AZG3              	100.00%
H3B349              	19.54%		
Bootstrap support for H3BAR8 as seed ortholog is 100%.
Bootstrap support for D3AZG3 as seed ortholog is 100%.

Group of orthologs #2020. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 P.pallidum:121

H3AH26              	100.00%		D3BP72              	100.00%
H3AXL2              	100.00%		
Bootstrap support for H3AH26 as seed ortholog is 100%.
Bootstrap support for H3AXL2 as seed ortholog is 100%.
Bootstrap support for D3BP72 as seed ortholog is 100%.

Group of orthologs #2021. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.pallidum:121

H3AZX2              	100.00%		D3BM15              	100.00%
H3A0P5              	49.70%		
Bootstrap support for H3AZX2 as seed ortholog is 96%.
Bootstrap support for D3BM15 as seed ortholog is 100%.

Group of orthologs #2022. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 P.pallidum:78

H3AIL2              	100.00%		D3BB72              	100.00%
Bootstrap support for H3AIL2 as seed ortholog is 100%.
Bootstrap support for D3BB72 as seed ortholog is 99%.

Group of orthologs #2023. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 P.pallidum:121

H3B933              	100.00%		D3B1A3              	100.00%
Bootstrap support for H3B933 as seed ortholog is 100%.
Bootstrap support for D3B1A3 as seed ortholog is 100%.

Group of orthologs #2024. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 P.pallidum:121

H3B7F4              	100.00%		D3B9C3              	100.00%
Bootstrap support for H3B7F4 as seed ortholog is 100%.
Bootstrap support for D3B9C3 as seed ortholog is 100%.

Group of orthologs #2025. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 P.pallidum:64

H3B5L0              	100.00%		D3BLD5              	100.00%
Bootstrap support for H3B5L0 as seed ortholog is 100%.
Bootstrap support for D3BLD5 as seed ortholog is 97%.

Group of orthologs #2026. Best score 120 bits
Score difference with first non-orthologous sequence - L.chalumnae:120 P.pallidum:120

H3AM96              	100.00%		D3B7E6              	100.00%
H2ZSW4              	46.73%		
H3A4S4              	6.81%		
H3AKZ8              	6.28%		
Bootstrap support for H3AM96 as seed ortholog is 100%.
Bootstrap support for D3B7E6 as seed ortholog is 100%.

Group of orthologs #2027. Best score 120 bits
Score difference with first non-orthologous sequence - L.chalumnae:120 P.pallidum:39

H3AYM7              	100.00%		D3B7E8              	100.00%
H3AKC0              	77.85%		
H3AAT6              	38.62%		
H2ZYJ9              	13.62%		
Bootstrap support for H3AYM7 as seed ortholog is 100%.
Bootstrap support for D3B7E8 as seed ortholog is 94%.

Group of orthologs #2028. Best score 120 bits
Score difference with first non-orthologous sequence - L.chalumnae:120 P.pallidum:120

H3AYK4              	100.00%		D3AYL5              	100.00%
H3AKR5              	40.75%		
H3APM9              	37.86%		
Bootstrap support for H3AYK4 as seed ortholog is 100%.
Bootstrap support for D3AYL5 as seed ortholog is 100%.

Group of orthologs #2029. Best score 120 bits
Score difference with first non-orthologous sequence - L.chalumnae:120 P.pallidum:120

H3ASE7              	100.00%		D3B957              	100.00%
H3B8V7              	63.99%		
Bootstrap support for H3ASE7 as seed ortholog is 100%.
Bootstrap support for D3B957 as seed ortholog is 100%.

Group of orthologs #2030. Best score 120 bits
Score difference with first non-orthologous sequence - L.chalumnae:120 P.pallidum:120

H3B4I6              	100.00%		D3BAK2              	100.00%
H3BDF3              	22.11%		
Bootstrap support for H3B4I6 as seed ortholog is 100%.
Bootstrap support for D3BAK2 as seed ortholog is 100%.

Group of orthologs #2031. Best score 120 bits
Score difference with first non-orthologous sequence - L.chalumnae:120 P.pallidum:120

H3AQM9              	100.00%		D3AXU0              	100.00%
Bootstrap support for H3AQM9 as seed ortholog is 100%.
Bootstrap support for D3AXU0 as seed ortholog is 100%.

Group of orthologs #2032. Best score 120 bits
Score difference with first non-orthologous sequence - L.chalumnae:120 P.pallidum:120

H3B388              	100.00%		D3B5W0              	100.00%
Bootstrap support for H3B388 as seed ortholog is 100%.
Bootstrap support for D3B5W0 as seed ortholog is 100%.

Group of orthologs #2033. Best score 120 bits
Score difference with first non-orthologous sequence - L.chalumnae:120 P.pallidum:120

H3AGW2              	100.00%		D3BPJ5              	100.00%
Bootstrap support for H3AGW2 as seed ortholog is 100%.
Bootstrap support for D3BPJ5 as seed ortholog is 100%.

Group of orthologs #2034. Best score 120 bits
Score difference with first non-orthologous sequence - L.chalumnae:21 P.pallidum:68

H3AGV5              	100.00%		D3BRR5              	100.00%
Bootstrap support for H3AGV5 as seed ortholog is 76%.
Bootstrap support for D3BRR5 as seed ortholog is 98%.

Group of orthologs #2035. Best score 120 bits
Score difference with first non-orthologous sequence - L.chalumnae:120 P.pallidum:120

M3XJ77              	100.00%		D3AZM3              	100.00%
Bootstrap support for M3XJ77 as seed ortholog is 100%.
Bootstrap support for D3AZM3 as seed ortholog is 100%.

Group of orthologs #2036. Best score 120 bits
Score difference with first non-orthologous sequence - L.chalumnae:120 P.pallidum:48

H3BC77              	100.00%		D3BIW1              	100.00%
Bootstrap support for H3BC77 as seed ortholog is 100%.
Bootstrap support for D3BIW1 as seed ortholog is 89%.

Group of orthologs #2037. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.pallidum:119

H3AN08              	100.00%		D3AY24              	100.00%
H3AVB0              	42.08%		
Bootstrap support for H3AN08 as seed ortholog is 100%.
Bootstrap support for D3AY24 as seed ortholog is 100%.

Group of orthologs #2038. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:26 P.pallidum:34

H3AJA2              	100.00%		D3B2S2              	100.00%
                    	       		D3AZ81              	5.16%
Bootstrap support for H3AJA2 as seed ortholog is 73%.
Alternative seed ortholog is H3B1T3 (26 bits away from this cluster)
Bootstrap support for D3B2S2 as seed ortholog is 77%.

Group of orthologs #2039. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.pallidum:119

H3AJD1              	100.00%		D3BH80              	100.00%
H3B884              	37.54%		
Bootstrap support for H3AJD1 as seed ortholog is 100%.
Bootstrap support for D3BH80 as seed ortholog is 100%.

Group of orthologs #2040. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.pallidum:119

H3AZ11              	100.00%		D3B334              	100.00%
Bootstrap support for H3AZ11 as seed ortholog is 100%.
Bootstrap support for D3B334 as seed ortholog is 100%.

Group of orthologs #2041. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:15 P.pallidum:119

H3A5Z3              	100.00%		D3BU16              	100.00%
Bootstrap support for H3A5Z3 as seed ortholog is 56%.
Alternative seed ortholog is H3BGE4 (15 bits away from this cluster)
Bootstrap support for D3BU16 as seed ortholog is 100%.

Group of orthologs #2042. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.pallidum:119

H3AYN3              	100.00%		D3B7Q5              	100.00%
Bootstrap support for H3AYN3 as seed ortholog is 100%.
Bootstrap support for D3B7Q5 as seed ortholog is 100%.

Group of orthologs #2043. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.pallidum:119

H3AMM8              	100.00%		D3BKZ5              	100.00%
Bootstrap support for H3AMM8 as seed ortholog is 100%.
Bootstrap support for D3BKZ5 as seed ortholog is 100%.

Group of orthologs #2044. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.pallidum:119

H3BCF6              	100.00%		D3B3V2              	100.00%
Bootstrap support for H3BCF6 as seed ortholog is 100%.
Bootstrap support for D3B3V2 as seed ortholog is 100%.

Group of orthologs #2045. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.pallidum:119

H3B8N7              	100.00%		D3BCR3              	100.00%
Bootstrap support for H3B8N7 as seed ortholog is 100%.
Bootstrap support for D3BCR3 as seed ortholog is 100%.

Group of orthologs #2046. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.pallidum:119

M3XHD0              	100.00%		D3B862              	100.00%
Bootstrap support for M3XHD0 as seed ortholog is 100%.
Bootstrap support for D3B862 as seed ortholog is 100%.

Group of orthologs #2047. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:39 P.pallidum:48

H3B808              	100.00%		D3BL51              	100.00%
Bootstrap support for H3B808 as seed ortholog is 84%.
Bootstrap support for D3BL51 as seed ortholog is 94%.

Group of orthologs #2048. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 P.pallidum:119

H3BH98              	100.00%		D3BN29              	100.00%
Bootstrap support for H3BH98 as seed ortholog is 100%.
Bootstrap support for D3BN29 as seed ortholog is 100%.

Group of orthologs #2049. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:118 P.pallidum:118

H3A3K0              	100.00%		D3BV17              	100.00%
H3BGQ0              	46.96%		D3AWV8              	8.45%
H3BGU0              	45.00%		D3BP79              	5.90%
H3ASP1              	39.64%		
Bootstrap support for H3A3K0 as seed ortholog is 100%.
Bootstrap support for D3BV17 as seed ortholog is 100%.

Group of orthologs #2050. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:118 P.pallidum:118

H3AVQ3              	100.00%		D3BN13              	100.00%
H3AAL5              	23.00%		
Bootstrap support for H3AVQ3 as seed ortholog is 100%.
Bootstrap support for D3BN13 as seed ortholog is 100%.

Group of orthologs #2051. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:118 P.pallidum:118

H2ZUI6              	100.00%		D3BC41              	100.00%
Bootstrap support for H2ZUI6 as seed ortholog is 100%.
Bootstrap support for D3BC41 as seed ortholog is 100%.

Group of orthologs #2052. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:118 P.pallidum:58

H2ZRW8              	100.00%		D3BMW3              	100.00%
Bootstrap support for H2ZRW8 as seed ortholog is 100%.
Bootstrap support for D3BMW3 as seed ortholog is 99%.

Group of orthologs #2053. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:118 P.pallidum:118

H3AM14              	100.00%		D3B5P9              	100.00%
Bootstrap support for H3AM14 as seed ortholog is 100%.
Bootstrap support for D3B5P9 as seed ortholog is 100%.

Group of orthologs #2054. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:118 P.pallidum:118

H3AB73              	100.00%		D3BNM4              	100.00%
Bootstrap support for H3AB73 as seed ortholog is 100%.
Bootstrap support for D3BNM4 as seed ortholog is 100%.

Group of orthologs #2055. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:118 P.pallidum:118

H3AB21              	100.00%		D3BR17              	100.00%
Bootstrap support for H3AB21 as seed ortholog is 100%.
Bootstrap support for D3BR17 as seed ortholog is 100%.

Group of orthologs #2056. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:118 P.pallidum:118

M3XJB8              	100.00%		D3B4F8              	100.00%
Bootstrap support for M3XJB8 as seed ortholog is 100%.
Bootstrap support for D3B4F8 as seed ortholog is 100%.

Group of orthologs #2057. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:118 P.pallidum:118

H3B3A9              	100.00%		D3BQ25              	100.00%
Bootstrap support for H3B3A9 as seed ortholog is 100%.
Bootstrap support for D3BQ25 as seed ortholog is 100%.

Group of orthologs #2058. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:118 P.pallidum:118

M3XLH2              	100.00%		D3BKQ3              	100.00%
Bootstrap support for M3XLH2 as seed ortholog is 100%.
Bootstrap support for D3BKQ3 as seed ortholog is 100%.

Group of orthologs #2059. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 P.pallidum:118

H3BFR6              	100.00%		D3BU56              	100.00%
Bootstrap support for H3BFR6 as seed ortholog is 99%.
Bootstrap support for D3BU56 as seed ortholog is 100%.

Group of orthologs #2060. Best score 117 bits
Score difference with first non-orthologous sequence - L.chalumnae:117 P.pallidum:117

H3B3H9              	100.00%		D3B876              	100.00%
H3BA97              	100.00%		
Bootstrap support for H3B3H9 as seed ortholog is 100%.
Bootstrap support for H3BA97 as seed ortholog is 100%.
Bootstrap support for D3B876 as seed ortholog is 100%.

Group of orthologs #2061. Best score 117 bits
Score difference with first non-orthologous sequence - L.chalumnae:117 P.pallidum:117

H2ZTI6              	100.00%		D3BPE9              	100.00%
Bootstrap support for H2ZTI6 as seed ortholog is 100%.
Bootstrap support for D3BPE9 as seed ortholog is 100%.

Group of orthologs #2062. Best score 117 bits
Score difference with first non-orthologous sequence - L.chalumnae:117 P.pallidum:117

H3AS15              	100.00%		D3B2N6              	100.00%
Bootstrap support for H3AS15 as seed ortholog is 100%.
Bootstrap support for D3B2N6 as seed ortholog is 100%.

Group of orthologs #2063. Best score 117 bits
Score difference with first non-orthologous sequence - L.chalumnae:117 P.pallidum:117

H3B0N0              	100.00%		D3AZB6              	100.00%
Bootstrap support for H3B0N0 as seed ortholog is 100%.
Bootstrap support for D3AZB6 as seed ortholog is 100%.

Group of orthologs #2064. Best score 117 bits
Score difference with first non-orthologous sequence - L.chalumnae:117 P.pallidum:117

H3B4X7              	100.00%		D3AZW0              	100.00%
Bootstrap support for H3B4X7 as seed ortholog is 100%.
Bootstrap support for D3AZW0 as seed ortholog is 100%.

Group of orthologs #2065. Best score 117 bits
Score difference with first non-orthologous sequence - L.chalumnae:117 P.pallidum:117

H3AB03              	100.00%		D3BRR6              	100.00%
Bootstrap support for H3AB03 as seed ortholog is 100%.
Bootstrap support for D3BRR6 as seed ortholog is 100%.

Group of orthologs #2066. Best score 117 bits
Score difference with first non-orthologous sequence - L.chalumnae:117 P.pallidum:117

H3B9G9              	100.00%		D3B937              	100.00%
Bootstrap support for H3B9G9 as seed ortholog is 100%.
Bootstrap support for D3B937 as seed ortholog is 100%.

Group of orthologs #2067. Best score 117 bits
Score difference with first non-orthologous sequence - L.chalumnae:3 P.pallidum:31

H3BH32              	100.00%		D3B9I0              	100.00%
Bootstrap support for H3BH32 as seed ortholog is 45%.
Alternative seed ortholog is H3BH17 (3 bits away from this cluster)
Bootstrap support for D3B9I0 as seed ortholog is 86%.

Group of orthologs #2068. Best score 116 bits
Score difference with first non-orthologous sequence - L.chalumnae:116 P.pallidum:116

H3BAJ9              	100.00%		D3AXH7              	100.00%
H3AEH9              	35.24%		D3B9T5              	8.11%
H3BGA3              	31.70%		D3BCP8              	6.44%
Bootstrap support for H3BAJ9 as seed ortholog is 100%.
Bootstrap support for D3AXH7 as seed ortholog is 100%.

Group of orthologs #2069. Best score 116 bits
Score difference with first non-orthologous sequence - L.chalumnae:116 P.pallidum:116

H3B516              	100.00%		D3BAT1              	100.00%
H2ZYR2              	53.48%		
Bootstrap support for H3B516 as seed ortholog is 100%.
Bootstrap support for D3BAT1 as seed ortholog is 100%.

Group of orthologs #2070. Best score 116 bits
Score difference with first non-orthologous sequence - L.chalumnae:22 P.pallidum:24

M3XJ65              	100.00%		D3BTG8              	100.00%
H3AAG7              	29.61%		
Bootstrap support for M3XJ65 as seed ortholog is 77%.
Bootstrap support for D3BTG8 as seed ortholog is 81%.

Group of orthologs #2071. Best score 116 bits
Score difference with first non-orthologous sequence - L.chalumnae:116 P.pallidum:116

H3A3B6              	100.00%		D3B823              	100.00%
Bootstrap support for H3A3B6 as seed ortholog is 100%.
Bootstrap support for D3B823 as seed ortholog is 100%.

Group of orthologs #2072. Best score 116 bits
Score difference with first non-orthologous sequence - L.chalumnae:116 P.pallidum:116

H3AYZ5              	100.00%		D3AYP4              	100.00%
Bootstrap support for H3AYZ5 as seed ortholog is 100%.
Bootstrap support for D3AYP4 as seed ortholog is 100%.

Group of orthologs #2073. Best score 116 bits
Score difference with first non-orthologous sequence - L.chalumnae:116 P.pallidum:116

H3BEU1              	100.00%		D3BCM4              	100.00%
Bootstrap support for H3BEU1 as seed ortholog is 100%.
Bootstrap support for D3BCM4 as seed ortholog is 100%.

Group of orthologs #2074. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 P.pallidum:115

H3AJE5              	100.00%		D3B4U0              	100.00%
H2ZSG4              	8.23%		
Bootstrap support for H3AJE5 as seed ortholog is 100%.
Bootstrap support for D3B4U0 as seed ortholog is 100%.

Group of orthologs #2075. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 P.pallidum:115

H3BAP1              	100.00%		D3BKS2              	100.00%
H2ZVA3              	12.97%		
Bootstrap support for H3BAP1 as seed ortholog is 100%.
Bootstrap support for D3BKS2 as seed ortholog is 100%.

Group of orthologs #2076. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 P.pallidum:115

H2ZXI0              	100.00%		D3B5L6              	100.00%
Bootstrap support for H2ZXI0 as seed ortholog is 99%.
Bootstrap support for D3B5L6 as seed ortholog is 100%.

Group of orthologs #2077. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 P.pallidum:115

H3AWT1              	100.00%		D3B116              	100.00%
Bootstrap support for H3AWT1 as seed ortholog is 100%.
Bootstrap support for D3B116 as seed ortholog is 100%.

Group of orthologs #2078. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 P.pallidum:115

H3AVH8              	100.00%		D3BCX0              	100.00%
Bootstrap support for H3AVH8 as seed ortholog is 100%.
Bootstrap support for D3BCX0 as seed ortholog is 100%.

Group of orthologs #2079. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:37 P.pallidum:115

H3BAJ0              	100.00%		D3B5S6              	100.00%
Bootstrap support for H3BAJ0 as seed ortholog is 64%.
Alternative seed ortholog is H3BAQ3 (37 bits away from this cluster)
Bootstrap support for D3B5S6 as seed ortholog is 100%.

Group of orthologs #2080. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 P.pallidum:115

H3BAX6              	100.00%		D3BF71              	100.00%
Bootstrap support for H3BAX6 as seed ortholog is 100%.
Bootstrap support for D3BF71 as seed ortholog is 100%.

Group of orthologs #2081. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:14 P.pallidum:37

H3AQL7              	100.00%		D3B3S3              	100.00%
M3XI57              	45.06%		
H3BI67              	42.04%		
Bootstrap support for H3AQL7 as seed ortholog is 62%.
Alternative seed ortholog is H3AKM0 (14 bits away from this cluster)
Bootstrap support for D3B3S3 as seed ortholog is 78%.

Group of orthologs #2082. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.pallidum:40

H3ART8              	100.00%		D3B699              	100.00%
M3XKI1              	6.59%		D3B696              	8.65%
Bootstrap support for H3ART8 as seed ortholog is 99%.
Bootstrap support for D3B699 as seed ortholog is 97%.

Group of orthologs #2083. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.pallidum:114

H3A677              	100.00%		D3B2Q5              	100.00%
H3B4W3              	20.64%		
Bootstrap support for H3A677 as seed ortholog is 100%.
Bootstrap support for D3B2Q5 as seed ortholog is 100%.

Group of orthologs #2084. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:39 P.pallidum:114

H3AD13              	100.00%		D3B900              	100.00%
H3A2A5              	30.90%		
Bootstrap support for H3AD13 as seed ortholog is 89%.
Bootstrap support for D3B900 as seed ortholog is 100%.

Group of orthologs #2085. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:20 P.pallidum:114

H3ALQ8              	100.00%		D3BAH1              	100.00%
Bootstrap support for H3ALQ8 as seed ortholog is 69%.
Alternative seed ortholog is H3A399 (20 bits away from this cluster)
Bootstrap support for D3BAH1 as seed ortholog is 100%.

Group of orthologs #2086. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.pallidum:114

H3AW30              	100.00%		D3BCD6              	100.00%
Bootstrap support for H3AW30 as seed ortholog is 100%.
Bootstrap support for D3BCD6 as seed ortholog is 100%.

Group of orthologs #2087. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.pallidum:114

H3AT77              	100.00%		D3BFQ4              	100.00%
Bootstrap support for H3AT77 as seed ortholog is 100%.
Bootstrap support for D3BFQ4 as seed ortholog is 100%.

Group of orthologs #2088. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.pallidum:114

H3BCU1              	100.00%		D3B5L1              	100.00%
Bootstrap support for H3BCU1 as seed ortholog is 100%.
Bootstrap support for D3B5L1 as seed ortholog is 100%.

Group of orthologs #2089. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.pallidum:114

M3XJ75              	100.00%		D3BAU6              	100.00%
Bootstrap support for M3XJ75 as seed ortholog is 100%.
Bootstrap support for D3BAU6 as seed ortholog is 100%.

Group of orthologs #2090. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.pallidum:114

H3BGK8              	100.00%		D3BER1              	100.00%
Bootstrap support for H3BGK8 as seed ortholog is 100%.
Bootstrap support for D3BER1 as seed ortholog is 100%.

Group of orthologs #2091. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.pallidum:114

H3B346              	100.00%		D3BRY9              	100.00%
Bootstrap support for H3B346 as seed ortholog is 100%.
Bootstrap support for D3BRY9 as seed ortholog is 100%.

Group of orthologs #2092. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 P.pallidum:114

H3BCA1              	100.00%		D3BR79              	100.00%
Bootstrap support for H3BCA1 as seed ortholog is 100%.
Bootstrap support for D3BR79 as seed ortholog is 100%.

Group of orthologs #2093. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.pallidum:113

H3A9H6              	100.00%		D3BKU9              	100.00%
H2ZTZ4              	52.07%		
H3AAQ6              	50.54%		
Bootstrap support for H3A9H6 as seed ortholog is 100%.
Bootstrap support for D3BKU9 as seed ortholog is 100%.

Group of orthologs #2094. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 P.pallidum:113

H3BB03              	100.00%		D3B753              	100.00%
H2ZZP3              	26.11%		
Bootstrap support for H3BB03 as seed ortholog is 97%.
Bootstrap support for D3B753 as seed ortholog is 100%.

Group of orthologs #2095. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:30 P.pallidum:113

H3BB80              	100.00%		D3BR00              	100.00%
                    	       		D3BR01              	38.54%
Bootstrap support for H3BB80 as seed ortholog is 91%.
Bootstrap support for D3BR00 as seed ortholog is 100%.

Group of orthologs #2096. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.pallidum:113

H3AAG2              	100.00%		D3AXF0              	100.00%
Bootstrap support for H3AAG2 as seed ortholog is 100%.
Bootstrap support for D3AXF0 as seed ortholog is 100%.

Group of orthologs #2097. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.pallidum:113

H3A0J9              	100.00%		D3BQ07              	100.00%
Bootstrap support for H3A0J9 as seed ortholog is 100%.
Bootstrap support for D3BQ07 as seed ortholog is 100%.

Group of orthologs #2098. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.pallidum:113

H2ZZH6              	100.00%		D3BU39              	100.00%
Bootstrap support for H2ZZH6 as seed ortholog is 100%.
Bootstrap support for D3BU39 as seed ortholog is 100%.

Group of orthologs #2099. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.pallidum:113

H3AN10              	100.00%		D3BAP4              	100.00%
Bootstrap support for H3AN10 as seed ortholog is 100%.
Bootstrap support for D3BAP4 as seed ortholog is 100%.

Group of orthologs #2100. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.pallidum:113

H3APE1              	100.00%		D3BER5              	100.00%
Bootstrap support for H3APE1 as seed ortholog is 100%.
Bootstrap support for D3BER5 as seed ortholog is 100%.

Group of orthologs #2101. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.pallidum:113

M3XI62              	100.00%		D3AY20              	100.00%
Bootstrap support for M3XI62 as seed ortholog is 100%.
Bootstrap support for D3AY20 as seed ortholog is 100%.

Group of orthologs #2102. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.pallidum:113

H3B636              	100.00%		D3BM58              	100.00%
Bootstrap support for H3B636 as seed ortholog is 100%.
Bootstrap support for D3BM58 as seed ortholog is 100%.

Group of orthologs #2103. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 P.pallidum:113

H3BB22              	100.00%		D3BTD4              	100.00%
Bootstrap support for H3BB22 as seed ortholog is 100%.
Bootstrap support for D3BTD4 as seed ortholog is 100%.

Group of orthologs #2104. Best score 112 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 P.pallidum:112

H3B271              	100.00%		D3B799              	100.00%
H3ARQ0              	24.17%		D3B7A1              	81.97%
                    	       		D3BFA0              	51.66%
                    	       		D3B974              	5.57%
Bootstrap support for H3B271 as seed ortholog is 100%.
Bootstrap support for D3B799 as seed ortholog is 100%.

Group of orthologs #2105. Best score 112 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 P.pallidum:112

H3BCQ8              	100.00%		D3AZC5              	100.00%
H3A5K1              	50.36%		
H3AZW3              	39.57%		
Bootstrap support for H3BCQ8 as seed ortholog is 100%.
Bootstrap support for D3AZC5 as seed ortholog is 100%.

Group of orthologs #2106. Best score 112 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 P.pallidum:112

H3A7I8              	100.00%		D3BR33              	100.00%
H3AV41              	55.56%		
Bootstrap support for H3A7I8 as seed ortholog is 100%.
Bootstrap support for D3BR33 as seed ortholog is 100%.

Group of orthologs #2107. Best score 112 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 P.pallidum:112

H3ABF4              	100.00%		D3B2S3              	100.00%
Bootstrap support for H3ABF4 as seed ortholog is 100%.
Bootstrap support for D3B2S3 as seed ortholog is 100%.

Group of orthologs #2108. Best score 112 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 P.pallidum:112

H3A7W9              	100.00%		D3B745              	100.00%
Bootstrap support for H3A7W9 as seed ortholog is 100%.
Bootstrap support for D3B745 as seed ortholog is 100%.

Group of orthologs #2109. Best score 112 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 P.pallidum:112

H3B4S8              	100.00%		D3BA49              	100.00%
Bootstrap support for H3B4S8 as seed ortholog is 100%.
Bootstrap support for D3BA49 as seed ortholog is 100%.

Group of orthologs #2110. Best score 112 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 P.pallidum:112

H3BH15              	100.00%		D3B6R0              	100.00%
Bootstrap support for H3BH15 as seed ortholog is 100%.
Bootstrap support for D3B6R0 as seed ortholog is 100%.

Group of orthologs #2111. Best score 112 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 P.pallidum:112

H3BF99              	100.00%		D3BKF8              	100.00%
Bootstrap support for H3BF99 as seed ortholog is 100%.
Bootstrap support for D3BKF8 as seed ortholog is 100%.

Group of orthologs #2112. Best score 112 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 P.pallidum:17

M3XL77              	100.00%		D3BVN4              	100.00%
Bootstrap support for M3XL77 as seed ortholog is 100%.
Bootstrap support for D3BVN4 as seed ortholog is 59%.
Alternative seed ortholog is D3BL15 (17 bits away from this cluster)

Group of orthologs #2113. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:36 P.pallidum:36

H3B8R5              	100.00%		D3BD65              	100.00%
H3A3Y3              	53.59%		D3AZ69              	71.73%
                    	       		D3BFH8              	67.98%
                    	       		D3B713              	67.98%
                    	       		D3BFI0              	62.16%
                    	       		D3BDQ2              	60.29%
                    	       		D3B9L8              	45.74%
                    	       		D3BRE3              	45.11%
                    	       		D3B9V0              	43.45%
                    	       		D3BRE4              	42.83%
                    	       		D3B9V1              	42.83%
                    	       		D3B9L0              	42.62%
                    	       		D3BGA3              	37.01%
                    	       		D3BPQ8              	17.88%
                    	       		D3B9A4              	17.05%
                    	       		D3BMH4              	8.11%
                    	       		D3BUR9              	7.28%
Bootstrap support for H3B8R5 as seed ortholog is 90%.
Bootstrap support for D3BD65 as seed ortholog is 87%.

Group of orthologs #2114. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:4 P.pallidum:111

H2ZWK1              	100.00%		D3B8B6              	100.00%
H3BEC2              	29.18%		
H3B2G4              	21.18%		
Bootstrap support for H2ZWK1 as seed ortholog is 57%.
Alternative seed ortholog is H3A8Y9 (4 bits away from this cluster)
Bootstrap support for D3B8B6 as seed ortholog is 100%.

Group of orthologs #2115. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.pallidum:35

H2ZSY8              	100.00%		D3BFK9              	100.00%
H3AAA2              	43.67%		D3BSZ3              	41.64%
Bootstrap support for H2ZSY8 as seed ortholog is 100%.
Bootstrap support for D3BFK9 as seed ortholog is 70%.
Alternative seed ortholog is D3BCF0 (35 bits away from this cluster)

Group of orthologs #2116. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:35 P.pallidum:54

M3XJM7              	100.00%		D3B7J8              	100.00%
H3AGQ6              	37.56%		
H3BA37              	32.04%		
Bootstrap support for M3XJM7 as seed ortholog is 91%.
Bootstrap support for D3B7J8 as seed ortholog is 99%.

Group of orthologs #2117. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.pallidum:111

H3A493              	100.00%		D3B3B5              	100.00%
H3BCC3              	23.38%		
Bootstrap support for H3A493 as seed ortholog is 100%.
Bootstrap support for D3B3B5 as seed ortholog is 100%.

Group of orthologs #2118. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.pallidum:69

H2ZY18              	100.00%		D3BES9              	100.00%
Bootstrap support for H2ZY18 as seed ortholog is 100%.
Bootstrap support for D3BES9 as seed ortholog is 97%.

Group of orthologs #2119. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.pallidum:111

H3AAP3              	100.00%		D3B6J6              	100.00%
Bootstrap support for H3AAP3 as seed ortholog is 100%.
Bootstrap support for D3B6J6 as seed ortholog is 100%.

Group of orthologs #2120. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.pallidum:111

H3AEL0              	100.00%		D3BQE3              	100.00%
Bootstrap support for H3AEL0 as seed ortholog is 100%.
Bootstrap support for D3BQE3 as seed ortholog is 100%.

Group of orthologs #2121. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.pallidum:111

H3B6N8              	100.00%		D3B416              	100.00%
Bootstrap support for H3B6N8 as seed ortholog is 100%.
Bootstrap support for D3B416 as seed ortholog is 100%.

Group of orthologs #2122. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.pallidum:111

H3BC03              	100.00%		D3B7C5              	100.00%
Bootstrap support for H3BC03 as seed ortholog is 100%.
Bootstrap support for D3B7C5 as seed ortholog is 100%.

Group of orthologs #2123. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:8 P.pallidum:41

H3BDM6              	100.00%		D3BHG1              	100.00%
Bootstrap support for H3BDM6 as seed ortholog is 60%.
Alternative seed ortholog is H3B6E9 (8 bits away from this cluster)
Bootstrap support for D3BHG1 as seed ortholog is 91%.

Group of orthologs #2124. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.pallidum:111

H3B2E8              	100.00%		D3BSZ4              	100.00%
Bootstrap support for H3B2E8 as seed ortholog is 100%.
Bootstrap support for D3BSZ4 as seed ortholog is 100%.

Group of orthologs #2125. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 P.pallidum:111

H3BI39              	100.00%		D3BKP6              	100.00%
Bootstrap support for H3BI39 as seed ortholog is 100%.
Bootstrap support for D3BKP6 as seed ortholog is 100%.

Group of orthologs #2126. Best score 110 bits
Score difference with first non-orthologous sequence - L.chalumnae:21 P.pallidum:20

M3XL18              	100.00%		D3BR40              	100.00%
H3ADL4              	41.75%		
H3ABP0              	30.80%		
H3ALU7              	24.91%		
H3AQ35              	23.53%		
H3A1K7              	13.03%		
Bootstrap support for M3XL18 as seed ortholog is 90%.
Bootstrap support for D3BR40 as seed ortholog is 70%.
Alternative seed ortholog is D3BP77 (20 bits away from this cluster)

Group of orthologs #2127. Best score 110 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 P.pallidum:110

H3B188              	100.00%		D3BSP7              	100.00%
H3ACM5              	33.52%		
H3BBZ2              	23.01%		
Bootstrap support for H3B188 as seed ortholog is 100%.
Bootstrap support for D3BSP7 as seed ortholog is 100%.

Group of orthologs #2128. Best score 110 bits
Score difference with first non-orthologous sequence - L.chalumnae:40 P.pallidum:110

H3AZU0              	100.00%		D3B7Y6              	100.00%
H3B4D7              	50.72%		
Bootstrap support for H3AZU0 as seed ortholog is 99%.
Bootstrap support for D3B7Y6 as seed ortholog is 100%.

Group of orthologs #2129. Best score 110 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 P.pallidum:110

H3AUC7              	100.00%		D3BNJ5              	100.00%
H3A0P6              	19.15%		
Bootstrap support for H3AUC7 as seed ortholog is 100%.
Bootstrap support for D3BNJ5 as seed ortholog is 100%.

Group of orthologs #2130. Best score 110 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 P.pallidum:70

H3AVF5              	100.00%		D3AXK3              	100.00%
Bootstrap support for H3AVF5 as seed ortholog is 100%.
Bootstrap support for D3AXK3 as seed ortholog is 99%.

Group of orthologs #2131. Best score 110 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 P.pallidum:110

H3ACI6              	100.00%		D3BGM9              	100.00%
Bootstrap support for H3ACI6 as seed ortholog is 100%.
Bootstrap support for D3BGM9 as seed ortholog is 100%.

Group of orthologs #2132. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 P.pallidum:31

H3AX14              	100.00%		D3BR31              	100.00%
M3XLN5              	100.00%		
Bootstrap support for H3AX14 as seed ortholog is 100%.
Bootstrap support for M3XLN5 as seed ortholog is 100%.
Bootstrap support for D3BR31 as seed ortholog is 90%.

Group of orthologs #2133. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 P.pallidum:109

H2ZWC2              	100.00%		D3BFH1              	100.00%
Bootstrap support for H2ZWC2 as seed ortholog is 100%.
Bootstrap support for D3BFH1 as seed ortholog is 100%.

Group of orthologs #2134. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 P.pallidum:109

H2ZVQ1              	100.00%		D3BGE0              	100.00%
Bootstrap support for H2ZVQ1 as seed ortholog is 100%.
Bootstrap support for D3BGE0 as seed ortholog is 100%.

Group of orthologs #2135. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:13 P.pallidum:109

H3A3Y2              	100.00%		D3BIJ4              	100.00%
Bootstrap support for H3A3Y2 as seed ortholog is 70%.
Alternative seed ortholog is H2ZUL7 (13 bits away from this cluster)
Bootstrap support for D3BIJ4 as seed ortholog is 100%.

Group of orthologs #2136. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:46 P.pallidum:109

H3AZ04              	100.00%		D3AXH2              	100.00%
Bootstrap support for H3AZ04 as seed ortholog is 85%.
Bootstrap support for D3AXH2 as seed ortholog is 100%.

Group of orthologs #2137. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 P.pallidum:109

H3AYN9              	100.00%		D3B3C4              	100.00%
Bootstrap support for H3AYN9 as seed ortholog is 100%.
Bootstrap support for D3B3C4 as seed ortholog is 100%.

Group of orthologs #2138. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 P.pallidum:15

H3BCA4              	100.00%		D3AWW9              	100.00%
Bootstrap support for H3BCA4 as seed ortholog is 100%.
Bootstrap support for D3AWW9 as seed ortholog is 63%.
Alternative seed ortholog is D3AXM8 (15 bits away from this cluster)

Group of orthologs #2139. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:6 P.pallidum:108

H3B4N4              	100.00%		D3B6Z4              	100.00%
H3ABK2              	65.94%		
Bootstrap support for H3B4N4 as seed ortholog is 56%.
Alternative seed ortholog is H3AHX6 (6 bits away from this cluster)
Bootstrap support for D3B6Z4 as seed ortholog is 100%.

Group of orthologs #2140. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 P.pallidum:108

H2ZZC6              	100.00%		D3AY14              	100.00%
Bootstrap support for H2ZZC6 as seed ortholog is 99%.
Bootstrap support for D3AY14 as seed ortholog is 100%.

Group of orthologs #2141. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.pallidum:108

H2ZT96              	100.00%		D3BFN4              	100.00%
Bootstrap support for H2ZT96 as seed ortholog is 100%.
Bootstrap support for D3BFN4 as seed ortholog is 100%.

Group of orthologs #2142. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.pallidum:108

H3AMC5              	100.00%		D3AXJ8              	100.00%
Bootstrap support for H3AMC5 as seed ortholog is 100%.
Bootstrap support for D3AXJ8 as seed ortholog is 100%.

Group of orthologs #2143. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.pallidum:108

H3A2C0              	100.00%		D3BM59              	100.00%
Bootstrap support for H3A2C0 as seed ortholog is 100%.
Bootstrap support for D3BM59 as seed ortholog is 100%.

Group of orthologs #2144. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.pallidum:108

H3ARY1              	100.00%		D3B651              	100.00%
Bootstrap support for H3ARY1 as seed ortholog is 100%.
Bootstrap support for D3B651 as seed ortholog is 100%.

Group of orthologs #2145. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.pallidum:108

H3B0B4              	100.00%		D3B291              	100.00%
Bootstrap support for H3B0B4 as seed ortholog is 100%.
Bootstrap support for D3B291 as seed ortholog is 100%.

Group of orthologs #2146. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.pallidum:108

H3B1S6              	100.00%		D3BQZ9              	100.00%
Bootstrap support for H3B1S6 as seed ortholog is 100%.
Bootstrap support for D3BQZ9 as seed ortholog is 100%.

Group of orthologs #2147. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.pallidum:108

M3XJB2              	100.00%		D3BJ97              	100.00%
Bootstrap support for M3XJB2 as seed ortholog is 100%.
Bootstrap support for D3BJ97 as seed ortholog is 100%.

Group of orthologs #2148. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 P.pallidum:59

H3BEQ3              	100.00%		D3BUP0              	100.00%
Bootstrap support for H3BEQ3 as seed ortholog is 100%.
Bootstrap support for D3BUP0 as seed ortholog is 99%.

Group of orthologs #2149. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.pallidum:107

H3AQ30              	100.00%		D3BLT5              	100.00%
H3AX03              	45.41%		
H3B1M1              	37.31%		
H3AU71              	37.06%		
Bootstrap support for H3AQ30 as seed ortholog is 100%.
Bootstrap support for D3BLT5 as seed ortholog is 100%.

Group of orthologs #2150. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:31 P.pallidum:107

H3A1S1              	100.00%		D3BSI7              	100.00%
H3AGQ7              	16.50%		
Bootstrap support for H3A1S1 as seed ortholog is 61%.
Alternative seed ortholog is H3A768 (31 bits away from this cluster)
Bootstrap support for D3BSI7 as seed ortholog is 100%.

Group of orthologs #2151. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.pallidum:27

H3AXH9              	100.00%		D3BDB6              	100.00%
H3B2A6              	97.39%		
Bootstrap support for H3AXH9 as seed ortholog is 100%.
Bootstrap support for D3BDB6 as seed ortholog is 93%.

Group of orthologs #2152. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.pallidum:25

H3A3Z3              	100.00%		D3B8B1              	100.00%
Bootstrap support for H3A3Z3 as seed ortholog is 100%.
Bootstrap support for D3B8B1 as seed ortholog is 80%.

Group of orthologs #2153. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:11 P.pallidum:107

H3B7Z7              	100.00%		D3BAT8              	100.00%
Bootstrap support for H3B7Z7 as seed ortholog is 70%.
Alternative seed ortholog is H3B6R5 (11 bits away from this cluster)
Bootstrap support for D3BAT8 as seed ortholog is 100%.

Group of orthologs #2154. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.pallidum:107

M3XH40              	100.00%		D3B4N4              	100.00%
Bootstrap support for M3XH40 as seed ortholog is 100%.
Bootstrap support for D3B4N4 as seed ortholog is 100%.

Group of orthologs #2155. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 P.pallidum:107

H3BAL3              	100.00%		D3BV29              	100.00%
Bootstrap support for H3BAL3 as seed ortholog is 100%.
Bootstrap support for D3BV29 as seed ortholog is 100%.

Group of orthologs #2156. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:19 P.pallidum:106

H3A9B3              	100.00%		D3BJX5              	100.00%
H3AQP7              	100.00%		D3AYP9              	100.00%
H3B067              	48.75%		
H3B8G5              	47.82%		
Bootstrap support for H3A9B3 as seed ortholog is 70%.
Alternative seed ortholog is H3ANR3 (19 bits away from this cluster)
Bootstrap support for H3AQP7 as seed ortholog is 64%.
Alternative seed ortholog is H3ANR3 (19 bits away from this cluster)
Bootstrap support for D3BJX5 as seed ortholog is 100%.
Bootstrap support for D3AYP9 as seed ortholog is 100%.

Group of orthologs #2157. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 P.pallidum:106

H3A8W7              	100.00%		D3B1X5              	100.00%
H3AG20              	18.99%		
Bootstrap support for H3A8W7 as seed ortholog is 100%.
Bootstrap support for D3B1X5 as seed ortholog is 100%.

Group of orthologs #2158. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 P.pallidum:106

H3ABR9              	100.00%		D3BUG2              	100.00%
H3A3N3              	96.90%		
Bootstrap support for H3ABR9 as seed ortholog is 100%.
Bootstrap support for D3BUG2 as seed ortholog is 100%.

Group of orthologs #2159. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 P.pallidum:106

H3AN73              	100.00%		D3AYU8              	100.00%
Bootstrap support for H3AN73 as seed ortholog is 100%.
Bootstrap support for D3AYU8 as seed ortholog is 100%.

Group of orthologs #2160. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 P.pallidum:106

H3AGU0              	100.00%		D3B7V6              	100.00%
Bootstrap support for H3AGU0 as seed ortholog is 100%.
Bootstrap support for D3B7V6 as seed ortholog is 100%.

Group of orthologs #2161. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 P.pallidum:106

H3AS06              	100.00%		D3B0J7              	100.00%
Bootstrap support for H3AS06 as seed ortholog is 100%.
Bootstrap support for D3B0J7 as seed ortholog is 100%.

Group of orthologs #2162. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:19 P.pallidum:48

H3AT51              	100.00%		D3BC72              	100.00%
Bootstrap support for H3AT51 as seed ortholog is 80%.
Bootstrap support for D3BC72 as seed ortholog is 98%.

Group of orthologs #2163. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 P.pallidum:106

H3B0F1              	100.00%		D3BBA3              	100.00%
Bootstrap support for H3B0F1 as seed ortholog is 100%.
Bootstrap support for D3BBA3 as seed ortholog is 100%.

Group of orthologs #2164. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 P.pallidum:106

H3B334              	100.00%		D3BQP7              	100.00%
Bootstrap support for H3B334 as seed ortholog is 99%.
Bootstrap support for D3BQP7 as seed ortholog is 100%.

Group of orthologs #2165. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 P.pallidum:106

H3BFT4              	100.00%		D3BU58              	100.00%
Bootstrap support for H3BFT4 as seed ortholog is 100%.
Bootstrap support for D3BU58 as seed ortholog is 100%.

Group of orthologs #2166. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 P.pallidum:105

H3A926              	100.00%		D3AYL6              	100.00%
H3BCU4              	51.21%		
H3ANI3              	49.70%		
Bootstrap support for H3A926 as seed ortholog is 100%.
Bootstrap support for D3AYL6 as seed ortholog is 100%.

Group of orthologs #2167. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 P.pallidum:23

H2ZVS1              	100.00%		D3BDR6              	100.00%
H3AW52              	14.90%		
Bootstrap support for H2ZVS1 as seed ortholog is 100%.
Bootstrap support for D3BDR6 as seed ortholog is 77%.

Group of orthologs #2168. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 P.pallidum:105

H3AA52              	100.00%		D3B2U1              	100.00%
H3AIM6              	57.88%		
Bootstrap support for H3AA52 as seed ortholog is 100%.
Bootstrap support for D3B2U1 as seed ortholog is 100%.

Group of orthologs #2169. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 P.pallidum:105

H3A6D8              	100.00%		D3BIE9              	100.00%
H3BFG0              	22.38%		
Bootstrap support for H3A6D8 as seed ortholog is 100%.
Bootstrap support for D3BIE9 as seed ortholog is 100%.

Group of orthologs #2170. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:19 P.pallidum:46

H3APW8              	100.00%		D3BV16              	100.00%
H3A4F7              	16.96%		
Bootstrap support for H3APW8 as seed ortholog is 73%.
Alternative seed ortholog is H3B6E9 (19 bits away from this cluster)
Bootstrap support for D3BV16 as seed ortholog is 93%.

Group of orthologs #2171. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 P.pallidum:105

H2ZZC3              	100.00%		D3BKP1              	100.00%
Bootstrap support for H2ZZC3 as seed ortholog is 100%.
Bootstrap support for D3BKP1 as seed ortholog is 100%.

Group of orthologs #2172. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 P.pallidum:105

H3AY37              	100.00%		D3AZX2              	100.00%
Bootstrap support for H3AY37 as seed ortholog is 100%.
Bootstrap support for D3AZX2 as seed ortholog is 100%.

Group of orthologs #2173. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 P.pallidum:105

H3AHB8              	100.00%		D3BL38              	100.00%
Bootstrap support for H3AHB8 as seed ortholog is 100%.
Bootstrap support for D3BL38 as seed ortholog is 100%.

Group of orthologs #2174. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 P.pallidum:33

H3APW3              	100.00%		D3BEX3              	100.00%
Bootstrap support for H3APW3 as seed ortholog is 99%.
Bootstrap support for D3BEX3 as seed ortholog is 94%.

Group of orthologs #2175. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 P.pallidum:105

H3AY38              	100.00%		D3BFE0              	100.00%
Bootstrap support for H3AY38 as seed ortholog is 100%.
Bootstrap support for D3BFE0 as seed ortholog is 100%.

Group of orthologs #2176. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.pallidum:104

H3B3W6              	100.00%		D3BPI0              	100.00%
H3B3B1              	86.26%		
H3BHC6              	79.62%		
Bootstrap support for H3B3W6 as seed ortholog is 100%.
Bootstrap support for D3BPI0 as seed ortholog is 100%.

Group of orthologs #2177. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.pallidum:104

H3A4E1              	100.00%		D3BUI8              	100.00%
M3XGN6              	61.11%		
Bootstrap support for H3A4E1 as seed ortholog is 100%.
Bootstrap support for D3BUI8 as seed ortholog is 100%.

Group of orthologs #2178. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:40 P.pallidum:104

H3AVZ3              	100.00%		D3BAK4              	100.00%
H3ABB4              	53.22%		
Bootstrap support for H3AVZ3 as seed ortholog is 87%.
Bootstrap support for D3BAK4 as seed ortholog is 100%.

Group of orthologs #2179. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.pallidum:104

H3ABD0              	100.00%		D3B401              	100.00%
Bootstrap support for H3ABD0 as seed ortholog is 100%.
Bootstrap support for D3B401 as seed ortholog is 100%.

Group of orthologs #2180. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.pallidum:104

H3AA05              	100.00%		D3BLA0              	100.00%
Bootstrap support for H3AA05 as seed ortholog is 100%.
Bootstrap support for D3BLA0 as seed ortholog is 100%.

Group of orthologs #2181. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.pallidum:104

H3BBW9              	100.00%		D3B3D4              	100.00%
Bootstrap support for H3BBW9 as seed ortholog is 100%.
Bootstrap support for D3B3D4 as seed ortholog is 100%.

Group of orthologs #2182. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 P.pallidum:104

H3BCW6              	100.00%		D3BTD0              	100.00%
Bootstrap support for H3BCW6 as seed ortholog is 100%.
Bootstrap support for D3BTD0 as seed ortholog is 100%.

Group of orthologs #2183. Best score 103 bits
Score difference with first non-orthologous sequence - L.chalumnae:13 P.pallidum:103

H3B0L6              	100.00%		D3BL69              	100.00%
H3ABD2              	55.68%		D3B103              	9.42%
H3ADK6              	21.79%		D3BJS3              	5.19%
Bootstrap support for H3B0L6 as seed ortholog is 79%.
Bootstrap support for D3BL69 as seed ortholog is 100%.

Group of orthologs #2184. Best score 103 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 P.pallidum:103

H3AWY8              	100.00%		D3BP56              	100.00%
H3BGU6              	42.77%		
Bootstrap support for H3AWY8 as seed ortholog is 100%.
Bootstrap support for D3BP56 as seed ortholog is 100%.

Group of orthologs #2185. Best score 103 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 P.pallidum:103

H3AB96              	100.00%		D3B277              	100.00%
Bootstrap support for H3AB96 as seed ortholog is 100%.
Bootstrap support for D3B277 as seed ortholog is 100%.

Group of orthologs #2186. Best score 103 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.pallidum:24

H3A9K2              	100.00%		D3BE07              	100.00%
Bootstrap support for H3A9K2 as seed ortholog is 97%.
Bootstrap support for D3BE07 as seed ortholog is 83%.

Group of orthologs #2187. Best score 103 bits
Score difference with first non-orthologous sequence - L.chalumnae:7 P.pallidum:103

H2ZWS9              	100.00%		D3BRH7              	100.00%
Bootstrap support for H2ZWS9 as seed ortholog is 52%.
Alternative seed ortholog is H3A399 (7 bits away from this cluster)
Bootstrap support for D3BRH7 as seed ortholog is 100%.

Group of orthologs #2188. Best score 103 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 P.pallidum:103

H3AJB1              	100.00%		D3B9I4              	100.00%
Bootstrap support for H3AJB1 as seed ortholog is 100%.
Bootstrap support for D3B9I4 as seed ortholog is 100%.

Group of orthologs #2189. Best score 103 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 P.pallidum:103

H3AN51              	100.00%		D3BCD5              	100.00%
Bootstrap support for H3AN51 as seed ortholog is 100%.
Bootstrap support for D3BCD5 as seed ortholog is 100%.

Group of orthologs #2190. Best score 103 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 P.pallidum:103

H3BBL8              	100.00%		D3AVN0              	100.00%
Bootstrap support for H3BBL8 as seed ortholog is 100%.
Bootstrap support for D3AVN0 as seed ortholog is 100%.

Group of orthologs #2191. Best score 103 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 P.pallidum:103

H3BE34              	100.00%		D3BAZ8              	100.00%
Bootstrap support for H3BE34 as seed ortholog is 100%.
Bootstrap support for D3BAZ8 as seed ortholog is 100%.

Group of orthologs #2192. Best score 103 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 P.pallidum:103

H3AZ08              	100.00%		D3BQB1              	100.00%
Bootstrap support for H3AZ08 as seed ortholog is 100%.
Bootstrap support for D3BQB1 as seed ortholog is 100%.

Group of orthologs #2193. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 P.pallidum:102

H2ZT12              	100.00%		D3B497              	100.00%
H2ZS00              	45.96%		
H3AUK0              	44.17%		
Bootstrap support for H2ZT12 as seed ortholog is 100%.
Bootstrap support for D3B497 as seed ortholog is 100%.

Group of orthologs #2194. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 P.pallidum:102

H3B527              	100.00%		D3BAV6              	100.00%
H3BFX5              	100.00%		
H3A328              	45.22%		
Bootstrap support for H3B527 as seed ortholog is 100%.
Bootstrap support for H3BFX5 as seed ortholog is 100%.
Bootstrap support for D3BAV6 as seed ortholog is 100%.

Group of orthologs #2195. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 P.pallidum:102

H3ASE8              	100.00%		D3BQQ7              	100.00%
H3B9I6              	56.72%		
H3B935              	43.95%		
Bootstrap support for H3ASE8 as seed ortholog is 100%.
Bootstrap support for D3BQQ7 as seed ortholog is 100%.

Group of orthologs #2196. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 P.pallidum:102

H2ZSP1              	100.00%		D3BN90              	100.00%
H3BD58              	35.67%		
Bootstrap support for H2ZSP1 as seed ortholog is 100%.
Bootstrap support for D3BN90 as seed ortholog is 100%.

Group of orthologs #2197. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 P.pallidum:102

H3AGQ4              	100.00%		D3BK76              	100.00%
H3ABM3              	95.38%		
Bootstrap support for H3AGQ4 as seed ortholog is 100%.
Bootstrap support for D3BK76 as seed ortholog is 100%.

Group of orthologs #2198. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 P.pallidum:8

M3XKM1              	100.00%		D3B773              	100.00%
H3B3P2              	41.79%		
Bootstrap support for M3XKM1 as seed ortholog is 100%.
Bootstrap support for D3B773 as seed ortholog is 56%.
Alternative seed ortholog is D3B3E1 (8 bits away from this cluster)

Group of orthologs #2199. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 P.pallidum:102

H3B9C9              	100.00%		D3BV18              	100.00%
H3BFJ3              	100.00%		
Bootstrap support for H3B9C9 as seed ortholog is 100%.
Bootstrap support for H3BFJ3 as seed ortholog is 100%.
Bootstrap support for D3BV18 as seed ortholog is 100%.

Group of orthologs #2200. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:33 P.pallidum:102

H3A8E0              	100.00%		D3AZN4              	100.00%
Bootstrap support for H3A8E0 as seed ortholog is 86%.
Bootstrap support for D3AZN4 as seed ortholog is 100%.

Group of orthologs #2201. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 P.pallidum:102

H3A9L9              	100.00%		D3B1V3              	100.00%
Bootstrap support for H3A9L9 as seed ortholog is 100%.
Bootstrap support for D3B1V3 as seed ortholog is 100%.

Group of orthologs #2202. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 P.pallidum:102

H3BFS7              	100.00%		D3B2C3              	100.00%
Bootstrap support for H3BFS7 as seed ortholog is 100%.
Bootstrap support for D3B2C3 as seed ortholog is 100%.

Group of orthologs #2203. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 P.pallidum:37

H3B7D3              	100.00%		D3BP84              	100.00%
Bootstrap support for H3B7D3 as seed ortholog is 100%.
Bootstrap support for D3BP84 as seed ortholog is 93%.

Group of orthologs #2204. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:5 P.pallidum:101

H3B306              	100.00%		D3B8L2              	100.00%
                    	       		D3BQI9              	100.00%
                    	       		D3BQI2              	81.79%
                    	       		D3BB33              	40.09%
                    	       		D3B7M7              	23.34%
                    	       		D3AW53              	22.85%
                    	       		D3BTF2              	21.69%
                    	       		D3B082              	19.37%
                    	       		D3BBB9              	18.54%
                    	       		D3BBB7              	18.21%
                    	       		D3B3Z1              	17.72%
                    	       		D3B9L2              	15.07%
                    	       		D3AZY9              	11.42%
Bootstrap support for H3B306 as seed ortholog is 56%.
Alternative seed ortholog is H3AIK0 (5 bits away from this cluster)
Bootstrap support for D3B8L2 as seed ortholog is 100%.
Bootstrap support for D3BQI9 as seed ortholog is 100%.

Group of orthologs #2205. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.pallidum:101

H3AS60              	100.00%		D3B7Y8              	100.00%
H3AD87              	25.73%		
H3BGI9              	20.32%		
Bootstrap support for H3AS60 as seed ortholog is 100%.
Bootstrap support for D3B7Y8 as seed ortholog is 100%.

Group of orthologs #2206. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.pallidum:101

H3AN84              	100.00%		D3B370              	100.00%
H3B1E6              	31.57%		
Bootstrap support for H3AN84 as seed ortholog is 100%.
Bootstrap support for D3B370 as seed ortholog is 100%.

Group of orthologs #2207. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:29 P.pallidum:101

H3A1G4              	100.00%		D3BHD2              	100.00%
Bootstrap support for H3A1G4 as seed ortholog is 59%.
Alternative seed ortholog is H3BEH4 (29 bits away from this cluster)
Bootstrap support for D3BHD2 as seed ortholog is 100%.

Group of orthologs #2208. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.pallidum:101

H3BC90              	100.00%		D3B0I7              	100.00%
Bootstrap support for H3BC90 as seed ortholog is 100%.
Bootstrap support for D3B0I7 as seed ortholog is 100%.

Group of orthologs #2209. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.pallidum:101

H3B542              	100.00%		D3B9S7              	100.00%
Bootstrap support for H3B542 as seed ortholog is 100%.
Bootstrap support for D3B9S7 as seed ortholog is 100%.

Group of orthologs #2210. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 P.pallidum:101

H3B418              	100.00%		D3BBD7              	100.00%
Bootstrap support for H3B418 as seed ortholog is 100%.
Bootstrap support for D3BBD7 as seed ortholog is 100%.

Group of orthologs #2211. Best score 100 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 P.pallidum:100

H2ZVU5              	100.00%		D3BFH4              	100.00%
H3AGH7              	54.87%		
H3AVV1              	48.10%		
H3B5E6              	14.73%		
Bootstrap support for H2ZVU5 as seed ortholog is 99%.
Bootstrap support for D3BFH4 as seed ortholog is 100%.

Group of orthologs #2212. Best score 100 bits
Score difference with first non-orthologous sequence - L.chalumnae:100 P.pallidum:100

H3A1H4              	100.00%		D3BN23              	100.00%
H3ADE9              	22.13%		
Bootstrap support for H3A1H4 as seed ortholog is 100%.
Bootstrap support for D3BN23 as seed ortholog is 100%.

Group of orthologs #2213. Best score 100 bits
Score difference with first non-orthologous sequence - L.chalumnae:100 P.pallidum:100

H3A390              	100.00%		D3B7V9              	100.00%
Bootstrap support for H3A390 as seed ortholog is 100%.
Bootstrap support for D3B7V9 as seed ortholog is 100%.

Group of orthologs #2214. Best score 100 bits
Score difference with first non-orthologous sequence - L.chalumnae:100 P.pallidum:24

H2ZSF0              	100.00%		D3BUI1              	100.00%
Bootstrap support for H2ZSF0 as seed ortholog is 100%.
Bootstrap support for D3BUI1 as seed ortholog is 72%.
Alternative seed ortholog is D3BGL8 (24 bits away from this cluster)

Group of orthologs #2215. Best score 100 bits
Score difference with first non-orthologous sequence - L.chalumnae:100 P.pallidum:100

H3AMB5              	100.00%		D3BKS5              	100.00%
Bootstrap support for H3AMB5 as seed ortholog is 100%.
Bootstrap support for D3BKS5 as seed ortholog is 100%.

Group of orthologs #2216. Best score 100 bits
Score difference with first non-orthologous sequence - L.chalumnae:100 P.pallidum:100

H3ASL8              	100.00%		D3BJ79              	100.00%
Bootstrap support for H3ASL8 as seed ortholog is 100%.
Bootstrap support for D3BJ79 as seed ortholog is 100%.

Group of orthologs #2217. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:30 P.pallidum:32

H3AI14              	100.00%		D3BFX1              	100.00%
H3B152              	100.00%		
H3B0L4              	52.58%		
H3ASZ3              	32.95%		
H3B3G3              	27.51%		
H3A8K6              	15.19%		
H3B5W8              	14.23%		
H3AMZ3              	5.44%		
Bootstrap support for H3AI14 as seed ortholog is 34%.
Alternative seed ortholog is H3B605 (30 bits away from this cluster)
Bootstrap support for H3B152 as seed ortholog is 38%.
Alternative seed ortholog is H3B605 (30 bits away from this cluster)
Bootstrap support for D3BFX1 as seed ortholog is 78%.

Group of orthologs #2218. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 P.pallidum:99

H3AV92              	100.00%		D3B524              	100.00%
H3AQB4              	27.93%		
H3AHG7              	22.76%		
H3AC84              	14.43%		
H2ZW36              	10.84%		
H3A8I6              	8.90%		
Bootstrap support for H3AV92 as seed ortholog is 100%.
Bootstrap support for D3B524 as seed ortholog is 100%.

Group of orthologs #2219. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:17 P.pallidum:99

H3BBX3              	100.00%		D3B1Q9              	100.00%
H3BCU3              	44.47%		
H3BI70              	43.92%		
H3B012              	36.80%		
Bootstrap support for H3BBX3 as seed ortholog is 42%.
Alternative seed ortholog is H3B2G5 (17 bits away from this cluster)
Bootstrap support for D3B1Q9 as seed ortholog is 100%.

Group of orthologs #2220. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:4 P.pallidum:99

H3A1X9              	100.00%		D3BTZ7              	100.00%
H3APQ9              	26.07%		
H3BH29              	26.07%		
Bootstrap support for H3A1X9 as seed ortholog is 84%.
Bootstrap support for D3BTZ7 as seed ortholog is 100%.

Group of orthologs #2221. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 P.pallidum:99

H3A9H8              	100.00%		D3BU12              	100.00%
H3A752              	7.36%		
H2ZTV7              	7.13%		
Bootstrap support for H3A9H8 as seed ortholog is 100%.
Bootstrap support for D3BU12 as seed ortholog is 100%.

Group of orthologs #2222. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 P.pallidum:99

H3ATA3              	100.00%		D3BH66              	100.00%
H3AGE2              	48.05%		
Bootstrap support for H3ATA3 as seed ortholog is 100%.
Bootstrap support for D3BH66 as seed ortholog is 100%.

Group of orthologs #2223. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 P.pallidum:99

H3BC56              	100.00%		D3BNA4              	100.00%
H3A2V0              	51.29%		
Bootstrap support for H3BC56 as seed ortholog is 100%.
Bootstrap support for D3BNA4 as seed ortholog is 100%.

Group of orthologs #2224. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 P.pallidum:99

H3AAL7              	100.00%		D3BMM5              	100.00%
Bootstrap support for H3AAL7 as seed ortholog is 100%.
Bootstrap support for D3BMM5 as seed ortholog is 100%.

Group of orthologs #2225. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 P.pallidum:99

H3A4M9              	100.00%		D3BUT5              	100.00%
Bootstrap support for H3A4M9 as seed ortholog is 100%.
Bootstrap support for D3BUT5 as seed ortholog is 100%.

Group of orthologs #2226. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 P.pallidum:99

H3BA54              	100.00%		D3B4Z3              	100.00%
Bootstrap support for H3BA54 as seed ortholog is 100%.
Bootstrap support for D3B4Z3 as seed ortholog is 100%.

Group of orthologs #2227. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 P.pallidum:99

H3AW97              	100.00%		D3BM32              	100.00%
Bootstrap support for H3AW97 as seed ortholog is 100%.
Bootstrap support for D3BM32 as seed ortholog is 100%.

Group of orthologs #2228. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 P.pallidum:99

H3B281              	100.00%		D3BL70              	100.00%
Bootstrap support for H3B281 as seed ortholog is 100%.
Bootstrap support for D3BL70 as seed ortholog is 100%.

Group of orthologs #2229. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 P.pallidum:99

H3AYR8              	100.00%		D3BSZ7              	100.00%
Bootstrap support for H3AYR8 as seed ortholog is 100%.
Bootstrap support for D3BSZ7 as seed ortholog is 100%.

Group of orthologs #2230. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 P.pallidum:99

M3XJ30              	100.00%		D3BED0              	100.00%
Bootstrap support for M3XJ30 as seed ortholog is 100%.
Bootstrap support for D3BED0 as seed ortholog is 100%.

Group of orthologs #2231. Best score 98 bits
Score difference with first non-orthologous sequence - L.chalumnae:39 P.pallidum:98

H3B957              	100.00%		D3BM01              	100.00%
H3AFI5              	42.00%		D3BD22              	8.65%
H3AES2              	20.95%		
H3A2A6              	18.24%		
H3A8U7              	13.40%		
H3B2J0              	9.91%		
H3B0F4              	9.01%		
H3B4V4              	6.98%		
H3A397              	6.53%		
H3A5T6              	6.53%		
H3AWS2              	5.86%		
Bootstrap support for H3B957 as seed ortholog is 79%.
Bootstrap support for D3BM01 as seed ortholog is 100%.

Group of orthologs #2232. Best score 98 bits
Score difference with first non-orthologous sequence - L.chalumnae:98 P.pallidum:98

H3A1C0              	100.00%		D3BC06              	100.00%
Bootstrap support for H3A1C0 as seed ortholog is 100%.
Bootstrap support for D3BC06 as seed ortholog is 100%.

Group of orthologs #2233. Best score 98 bits
Score difference with first non-orthologous sequence - L.chalumnae:98 P.pallidum:98

H3A9J4              	100.00%		D3BGQ6              	100.00%
Bootstrap support for H3A9J4 as seed ortholog is 100%.
Bootstrap support for D3BGQ6 as seed ortholog is 100%.

Group of orthologs #2234. Best score 98 bits
Score difference with first non-orthologous sequence - L.chalumnae:98 P.pallidum:98

H3ATQ2              	100.00%		D3B5Z9              	100.00%
Bootstrap support for H3ATQ2 as seed ortholog is 100%.
Bootstrap support for D3B5Z9 as seed ortholog is 100%.

Group of orthologs #2235. Best score 98 bits
Score difference with first non-orthologous sequence - L.chalumnae:98 P.pallidum:98

H3AY09              	100.00%		D3B9C8              	100.00%
Bootstrap support for H3AY09 as seed ortholog is 100%.
Bootstrap support for D3B9C8 as seed ortholog is 100%.

Group of orthologs #2236. Best score 98 bits
Score difference with first non-orthologous sequence - L.chalumnae:98 P.pallidum:98

H3ATL7              	100.00%		D3BEF4              	100.00%
Bootstrap support for H3ATL7 as seed ortholog is 100%.
Bootstrap support for D3BEF4 as seed ortholog is 100%.

Group of orthologs #2237. Best score 98 bits
Score difference with first non-orthologous sequence - L.chalumnae:98 P.pallidum:98

H3BDX1              	100.00%		D3B854              	100.00%
Bootstrap support for H3BDX1 as seed ortholog is 100%.
Bootstrap support for D3B854 as seed ortholog is 100%.

Group of orthologs #2238. Best score 98 bits
Score difference with first non-orthologous sequence - L.chalumnae:98 P.pallidum:98

H3B2B4              	100.00%		D3BMA2              	100.00%
Bootstrap support for H3B2B4 as seed ortholog is 100%.
Bootstrap support for D3BMA2 as seed ortholog is 100%.

Group of orthologs #2239. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.pallidum:97

H3AKS4              	100.00%		D3BRH4              	100.00%
H3AGN2              	20.50%		D3BRH0              	12.02%
                    	       		D3BIY7              	9.78%
                    	       		D3B6S8              	9.48%
                    	       		D3BNU5              	9.48%
                    	       		D3B944              	9.29%
                    	       		D3BFF2              	9.19%
                    	       		D3B8V8              	9.09%
                    	       		D3B939              	8.90%
                    	       		D3B935              	8.60%
                    	       		D3BJ19              	8.60%
                    	       		D3BTB2              	8.60%
                    	       		D3BHT3              	8.50%
                    	       		D3B8Z5              	8.41%
                    	       		D3B4Q8              	8.41%
                    	       		D3B948              	8.31%
                    	       		D3BHW8              	8.31%
                    	       		D3B5H4              	8.31%
                    	       		D3B947              	8.31%
                    	       		D3BFF3              	8.11%
                    	       		D3B964              	8.11%
                    	       		D3B8Y9              	7.92%
                    	       		D3B8Z1              	7.72%
                    	       		D3B674              	7.62%
                    	       		D3B8Y3              	7.62%
                    	       		D3BIV6              	7.62%
                    	       		D3BRL7              	7.43%
                    	       		D3B8Q2              	7.43%
                    	       		D3BG37              	7.33%
                    	       		D3B8Y1              	7.14%
                    	       		D3B932              	7.14%
                    	       		D3B927              	7.14%
                    	       		D3B8U3              	6.94%
                    	       		D3BI02              	6.74%
                    	       		D3BHZ9              	6.26%
                    	       		D3B8V1              	6.26%
                    	       		D3BHP2              	6.26%
                    	       		D3AYR2              	6.06%
                    	       		D3B8X6              	5.96%
                    	       		D3B924              	5.87%
                    	       		D3BFG9              	5.67%
                    	       		D3BHY3              	5.67%
                    	       		D3B603              	5.67%
                    	       		D3BEQ5              	5.18%
Bootstrap support for H3AKS4 as seed ortholog is 100%.
Bootstrap support for D3BRH4 as seed ortholog is 100%.

Group of orthologs #2240. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.pallidum:97

H3BBZ4              	100.00%		D3AYF8              	100.00%
H3BBI6              	22.73%		
Bootstrap support for H3BBZ4 as seed ortholog is 100%.
Bootstrap support for D3AYF8 as seed ortholog is 100%.

Group of orthologs #2241. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.pallidum:50

H3ALJ0              	100.00%		D3BVD6              	100.00%
                    	       		D3BVD5              	87.09%
Bootstrap support for H3ALJ0 as seed ortholog is 100%.
Bootstrap support for D3BVD6 as seed ortholog is 94%.

Group of orthologs #2242. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:34 P.pallidum:97

H3AJ21              	100.00%		D3AYC0              	100.00%
Bootstrap support for H3AJ21 as seed ortholog is 91%.
Bootstrap support for D3AYC0 as seed ortholog is 100%.

Group of orthologs #2243. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.pallidum:97

H3ARL1              	100.00%		D3B7B2              	100.00%
Bootstrap support for H3ARL1 as seed ortholog is 100%.
Bootstrap support for D3B7B2 as seed ortholog is 100%.

Group of orthologs #2244. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.pallidum:97

H3AID6              	100.00%		D3BG98              	100.00%
Bootstrap support for H3AID6 as seed ortholog is 100%.
Bootstrap support for D3BG98 as seed ortholog is 100%.

Group of orthologs #2245. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.pallidum:97

H3AWR6              	100.00%		D3BED9              	100.00%
Bootstrap support for H3AWR6 as seed ortholog is 100%.
Bootstrap support for D3BED9 as seed ortholog is 100%.

Group of orthologs #2246. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.pallidum:97

H3ADG6              	100.00%		D3BVK7              	100.00%
Bootstrap support for H3ADG6 as seed ortholog is 100%.
Bootstrap support for D3BVK7 as seed ortholog is 100%.

Group of orthologs #2247. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.pallidum:97

H3AZ21              	100.00%		D3BN74              	100.00%
Bootstrap support for H3AZ21 as seed ortholog is 100%.
Bootstrap support for D3BN74 as seed ortholog is 100%.

Group of orthologs #2248. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 P.pallidum:97

H3BBK5              	100.00%		D3BF90              	100.00%
Bootstrap support for H3BBK5 as seed ortholog is 100%.
Bootstrap support for D3BF90 as seed ortholog is 100%.

Group of orthologs #2249. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 P.pallidum:96

H3AKZ3              	100.00%		D3BF23              	100.00%
H3AZ94              	43.98%		
H3B5Y8              	27.82%		
H3ANY5              	19.79%		
H3B051              	18.86%		
H3APL3              	14.57%		
H3A1N5              	9.90%		
H3B7S8              	8.22%		
Bootstrap support for H3AKZ3 as seed ortholog is 100%.
Bootstrap support for D3BF23 as seed ortholog is 100%.

Group of orthologs #2250. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 P.pallidum:96

H2ZVU8              	100.00%		D3BR15              	100.00%
H3ADM0              	20.57%		
Bootstrap support for H2ZVU8 as seed ortholog is 77%.
Bootstrap support for D3BR15 as seed ortholog is 100%.

Group of orthologs #2251. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 P.pallidum:96

H3BG52              	100.00%		D3BRU0              	100.00%
H3BAU6              	40.76%		
Bootstrap support for H3BG52 as seed ortholog is 100%.
Bootstrap support for D3BRU0 as seed ortholog is 100%.

Group of orthologs #2252. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 P.pallidum:96

H3AES1              	100.00%		D3AZR0              	100.00%
Bootstrap support for H3AES1 as seed ortholog is 100%.
Bootstrap support for D3AZR0 as seed ortholog is 100%.

Group of orthologs #2253. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 P.pallidum:96

H3AD12              	100.00%		D3BET0              	100.00%
Bootstrap support for H3AD12 as seed ortholog is 100%.
Bootstrap support for D3BET0 as seed ortholog is 100%.

Group of orthologs #2254. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 P.pallidum:96

H3ASA1              	100.00%		D3B636              	100.00%
Bootstrap support for H3ASA1 as seed ortholog is 100%.
Bootstrap support for D3B636 as seed ortholog is 100%.

Group of orthologs #2255. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 P.pallidum:9

H3AR96              	100.00%		D3BBZ0              	100.00%
Bootstrap support for H3AR96 as seed ortholog is 100%.
Bootstrap support for D3BBZ0 as seed ortholog is 57%.
Alternative seed ortholog is D3B1G5 (9 bits away from this cluster)

Group of orthologs #2256. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 P.pallidum:96

H3B9U2              	100.00%		D3AX53              	100.00%
Bootstrap support for H3B9U2 as seed ortholog is 100%.
Bootstrap support for D3AX53 as seed ortholog is 100%.

Group of orthologs #2257. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 P.pallidum:96

H3BG30              	100.00%		D3AWM9              	100.00%
Bootstrap support for H3BG30 as seed ortholog is 100%.
Bootstrap support for D3AWM9 as seed ortholog is 100%.

Group of orthologs #2258. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 P.pallidum:39

H3BDL0              	100.00%		D3B5R3              	100.00%
Bootstrap support for H3BDL0 as seed ortholog is 87%.
Bootstrap support for D3B5R3 as seed ortholog is 87%.

Group of orthologs #2259. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:18 P.pallidum:96

H3B2A1              	100.00%		D3BI32              	100.00%
Bootstrap support for H3B2A1 as seed ortholog is 85%.
Bootstrap support for D3BI32 as seed ortholog is 100%.

Group of orthologs #2260. Best score 95 bits
Score difference with first non-orthologous sequence - L.chalumnae:95 P.pallidum:9

H3AF68              	100.00%		D3B0U5              	100.00%
H3B2T4              	100.00%		
H3A460              	34.78%		
Bootstrap support for H3AF68 as seed ortholog is 100%.
Bootstrap support for H3B2T4 as seed ortholog is 100%.
Bootstrap support for D3B0U5 as seed ortholog is 70%.
Alternative seed ortholog is D3BE00 (9 bits away from this cluster)

Group of orthologs #2261. Best score 95 bits
Score difference with first non-orthologous sequence - L.chalumnae:95 P.pallidum:95

H3A5Y2              	100.00%		D3BHW9              	100.00%
H3AU97              	21.10%		
H3ACL9              	19.36%		
Bootstrap support for H3A5Y2 as seed ortholog is 100%.
Bootstrap support for D3BHW9 as seed ortholog is 100%.

Group of orthologs #2262. Best score 95 bits
Score difference with first non-orthologous sequence - L.chalumnae:95 P.pallidum:95

H3BCX0              	100.00%		D3AZC1              	100.00%
H3B1K4              	13.67%		
Bootstrap support for H3BCX0 as seed ortholog is 100%.
Bootstrap support for D3AZC1 as seed ortholog is 100%.

Group of orthologs #2263. Best score 95 bits
Score difference with first non-orthologous sequence - L.chalumnae:95 P.pallidum:95

H3B8W7              	100.00%		D3AXK4              	100.00%
Bootstrap support for H3B8W7 as seed ortholog is 100%.
Bootstrap support for D3AXK4 as seed ortholog is 100%.

Group of orthologs #2264. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 P.pallidum:12

H3B1D9              	100.00%		D3B5E1              	100.00%
H3A2G0              	12.74%		
H3B7U1              	9.89%		
H3AF82              	8.75%		
H2ZTA3              	5.80%		
H3B4T4              	5.80%		
Bootstrap support for H3B1D9 as seed ortholog is 100%.
Bootstrap support for D3B5E1 as seed ortholog is 51%.
Alternative seed ortholog is D3AWK8 (12 bits away from this cluster)

Group of orthologs #2265. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 P.pallidum:94

H3A2M0              	100.00%		D3B575              	100.00%
H3A6U0              	17.07%		
H3A563              	11.65%		
Bootstrap support for H3A2M0 as seed ortholog is 100%.
Bootstrap support for D3B575 as seed ortholog is 100%.

Group of orthologs #2266. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:34 P.pallidum:94

H3A641              	100.00%		D3AY63              	100.00%
Bootstrap support for H3A641 as seed ortholog is 86%.
Bootstrap support for D3AY63 as seed ortholog is 100%.

Group of orthologs #2267. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 P.pallidum:94

H3AA39              	100.00%		D3AVP8              	100.00%
Bootstrap support for H3AA39 as seed ortholog is 100%.
Bootstrap support for D3AVP8 as seed ortholog is 100%.

Group of orthologs #2268. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 P.pallidum:94

H3AJD8              	100.00%		D3BCM0              	100.00%
Bootstrap support for H3AJD8 as seed ortholog is 100%.
Bootstrap support for D3BCM0 as seed ortholog is 100%.

Group of orthologs #2269. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 P.pallidum:94

H3BC16              	100.00%		D3AZX3              	100.00%
Bootstrap support for H3BC16 as seed ortholog is 100%.
Bootstrap support for D3AZX3 as seed ortholog is 100%.

Group of orthologs #2270. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 P.pallidum:94

H3B3E6              	100.00%		D3B803              	100.00%
Bootstrap support for H3B3E6 as seed ortholog is 100%.
Bootstrap support for D3B803 as seed ortholog is 100%.

Group of orthologs #2271. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.pallidum:94

H3B2Q6              	100.00%		D3B8P5              	100.00%
Bootstrap support for H3B2Q6 as seed ortholog is 90%.
Bootstrap support for D3B8P5 as seed ortholog is 100%.

Group of orthologs #2272. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 P.pallidum:94

H3AWK3              	100.00%		D3BE12              	100.00%
Bootstrap support for H3AWK3 as seed ortholog is 100%.
Bootstrap support for D3BE12 as seed ortholog is 100%.

Group of orthologs #2273. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 P.pallidum:94

H3AYZ6              	100.00%		D3BKH7              	100.00%
Bootstrap support for H3AYZ6 as seed ortholog is 100%.
Bootstrap support for D3BKH7 as seed ortholog is 100%.

Group of orthologs #2274. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:13 P.pallidum:26

H3BIM1              	100.00%		D3BKD3              	100.00%
Bootstrap support for H3BIM1 as seed ortholog is 71%.
Alternative seed ortholog is H3A1V9 (13 bits away from this cluster)
Bootstrap support for D3BKD3 as seed ortholog is 82%.

Group of orthologs #2275. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 P.pallidum:93

H3BF13              	100.00%		D3B9Z0              	100.00%
H3BEZ5              	80.24%		D3BHH8              	29.54%
                    	       		D3BPK3              	29.54%
Bootstrap support for H3BF13 as seed ortholog is 100%.
Bootstrap support for D3B9Z0 as seed ortholog is 100%.

Group of orthologs #2276. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 P.pallidum:93

H3A0G3              	100.00%		D3BA99              	100.00%
H3A6N4              	32.22%		
Bootstrap support for H3A0G3 as seed ortholog is 100%.
Bootstrap support for D3BA99 as seed ortholog is 100%.

Group of orthologs #2277. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:46 P.pallidum:93

M3XGG2              	100.00%		D3B0P5              	100.00%
M3XIR5              	56.00%		
Bootstrap support for M3XGG2 as seed ortholog is 97%.
Bootstrap support for D3B0P5 as seed ortholog is 100%.

Group of orthologs #2278. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 P.pallidum:29

M3XJA3              	100.00%		D3B7X6              	100.00%
H3BAW3              	27.31%		
Bootstrap support for M3XJA3 as seed ortholog is 100%.
Bootstrap support for D3B7X6 as seed ortholog is 90%.

Group of orthologs #2279. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 P.pallidum:93

H2ZRR9              	100.00%		D3BDK7              	100.00%
Bootstrap support for H2ZRR9 as seed ortholog is 100%.
Bootstrap support for D3BDK7 as seed ortholog is 100%.

Group of orthologs #2280. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 P.pallidum:93

H2ZRU7              	100.00%		D3BF01              	100.00%
Bootstrap support for H2ZRU7 as seed ortholog is 100%.
Bootstrap support for D3BF01 as seed ortholog is 100%.

Group of orthologs #2281. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 P.pallidum:93

H2ZWU6              	100.00%		D3BAV7              	100.00%
Bootstrap support for H2ZWU6 as seed ortholog is 100%.
Bootstrap support for D3BAV7 as seed ortholog is 100%.

Group of orthologs #2282. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 P.pallidum:93

H3A573              	100.00%		D3B6T9              	100.00%
Bootstrap support for H3A573 as seed ortholog is 100%.
Bootstrap support for D3B6T9 as seed ortholog is 100%.

Group of orthologs #2283. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 P.pallidum:93

H3ARK9              	100.00%		D3B6B4              	100.00%
Bootstrap support for H3ARK9 as seed ortholog is 100%.
Bootstrap support for D3B6B4 as seed ortholog is 100%.

Group of orthologs #2284. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 P.pallidum:32

H3AKD6              	100.00%		D3BBS6              	100.00%
Bootstrap support for H3AKD6 as seed ortholog is 100%.
Bootstrap support for D3BBS6 as seed ortholog is 72%.
Alternative seed ortholog is D3B7U0 (32 bits away from this cluster)

Group of orthologs #2285. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:36 P.pallidum:93

H3AZH3              	100.00%		D3B3B3              	100.00%
Bootstrap support for H3AZH3 as seed ortholog is 94%.
Bootstrap support for D3B3B3 as seed ortholog is 100%.

Group of orthologs #2286. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 P.pallidum:93

H3AVN8              	100.00%		D3BT01              	100.00%
Bootstrap support for H3AVN8 as seed ortholog is 100%.
Bootstrap support for D3BT01 as seed ortholog is 100%.

Group of orthologs #2287. Best score 92 bits
Score difference with first non-orthologous sequence - L.chalumnae:29 P.pallidum:92

H3AGJ4              	100.00%		D3BCJ0              	100.00%
H3AC88              	48.51%		
Bootstrap support for H3AGJ4 as seed ortholog is 81%.
Bootstrap support for D3BCJ0 as seed ortholog is 100%.

Group of orthologs #2288. Best score 92 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 P.pallidum:92

H3AD45              	100.00%		D3B3C9              	100.00%
Bootstrap support for H3AD45 as seed ortholog is 100%.
Bootstrap support for D3B3C9 as seed ortholog is 100%.

Group of orthologs #2289. Best score 92 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 P.pallidum:92

H2ZZW1              	100.00%		D3BHC2              	100.00%
Bootstrap support for H2ZZW1 as seed ortholog is 100%.
Bootstrap support for D3BHC2 as seed ortholog is 100%.

Group of orthologs #2290. Best score 92 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 P.pallidum:92

H3A1B2              	100.00%		D3BND9              	100.00%
Bootstrap support for H3A1B2 as seed ortholog is 100%.
Bootstrap support for D3BND9 as seed ortholog is 100%.

Group of orthologs #2291. Best score 92 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 P.pallidum:92

H3ASF6              	100.00%		D3B8T0              	100.00%
Bootstrap support for H3ASF6 as seed ortholog is 100%.
Bootstrap support for D3B8T0 as seed ortholog is 100%.

Group of orthologs #2292. Best score 92 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 P.pallidum:92

H3ALK1              	100.00%		D3BI09              	100.00%
Bootstrap support for H3ALK1 as seed ortholog is 100%.
Bootstrap support for D3BI09 as seed ortholog is 100%.

Group of orthologs #2293. Best score 92 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 P.pallidum:92

H3ARR9              	100.00%		D3BJK7              	100.00%
Bootstrap support for H3ARR9 as seed ortholog is 100%.
Bootstrap support for D3BJK7 as seed ortholog is 100%.

Group of orthologs #2294. Best score 92 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 P.pallidum:92

H3B068              	100.00%		D3BNN1              	100.00%
Bootstrap support for H3B068 as seed ortholog is 100%.
Bootstrap support for D3BNN1 as seed ortholog is 100%.

Group of orthologs #2295. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.pallidum:91

H3A0L2              	100.00%		D3B477              	100.00%
H2ZUH8              	39.95%		
H2ZYT4              	23.97%		
Bootstrap support for H3A0L2 as seed ortholog is 100%.
Bootstrap support for D3B477 as seed ortholog is 100%.

Group of orthologs #2296. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.pallidum:91

H3A620              	100.00%		D3B4B0              	100.00%
H3AFC7              	38.57%		D3B458              	44.51%
Bootstrap support for H3A620 as seed ortholog is 100%.
Bootstrap support for D3B4B0 as seed ortholog is 100%.

Group of orthologs #2297. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.pallidum:23

H3AEG6              	100.00%		D3BNK2              	100.00%
                    	       		D3BQ32              	100.00%
Bootstrap support for H3AEG6 as seed ortholog is 100%.
Bootstrap support for D3BNK2 as seed ortholog is 94%.
Bootstrap support for D3BQ32 as seed ortholog is 70%.
Alternative seed ortholog is D3BT83 (23 bits away from this cluster)

Group of orthologs #2298. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.pallidum:91

H3BBF8              	100.00%		D3B4V8              	100.00%
H3BEF3              	69.23%		
Bootstrap support for H3BBF8 as seed ortholog is 100%.
Bootstrap support for D3B4V8 as seed ortholog is 100%.

Group of orthologs #2299. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.pallidum:5

H3BDI2              	100.00%		D3BAK7              	100.00%
H3A3L7              	56.56%		
Bootstrap support for H3BDI2 as seed ortholog is 100%.
Bootstrap support for D3BAK7 as seed ortholog is 48%.
Alternative seed ortholog is D3AWM8 (5 bits away from this cluster)

Group of orthologs #2300. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.pallidum:91

H3BGA6              	100.00%		D3BAU2              	100.00%
H3A5W4              	57.43%		
Bootstrap support for H3BGA6 as seed ortholog is 100%.
Bootstrap support for D3BAU2 as seed ortholog is 100%.

Group of orthologs #2301. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:23 P.pallidum:91

H2ZXL8              	100.00%		D3AWK0              	100.00%
Bootstrap support for H2ZXL8 as seed ortholog is 75%.
Bootstrap support for D3AWK0 as seed ortholog is 100%.

Group of orthologs #2302. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:29 P.pallidum:91

H3ACG1              	100.00%		D3B5H2              	100.00%
Bootstrap support for H3ACG1 as seed ortholog is 86%.
Bootstrap support for D3B5H2 as seed ortholog is 100%.

Group of orthologs #2303. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.pallidum:91

H3AEC3              	100.00%		D3BEH7              	100.00%
Bootstrap support for H3AEC3 as seed ortholog is 100%.
Bootstrap support for D3BEH7 as seed ortholog is 100%.

Group of orthologs #2304. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.pallidum:91

H3ATB0              	100.00%		D3B8I6              	100.00%
Bootstrap support for H3ATB0 as seed ortholog is 100%.
Bootstrap support for D3B8I6 as seed ortholog is 100%.

Group of orthologs #2305. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.pallidum:91

H3B311              	100.00%		D3B147              	100.00%
Bootstrap support for H3B311 as seed ortholog is 100%.
Bootstrap support for D3B147 as seed ortholog is 100%.

Group of orthologs #2306. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.pallidum:91

H3AYD6              	100.00%		D3BBK5              	100.00%
Bootstrap support for H3AYD6 as seed ortholog is 100%.
Bootstrap support for D3BBK5 as seed ortholog is 100%.

Group of orthologs #2307. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.pallidum:91

H3BEP6              	100.00%		D3BGK9              	100.00%
Bootstrap support for H3BEP6 as seed ortholog is 100%.
Bootstrap support for D3BGK9 as seed ortholog is 100%.

Group of orthologs #2308. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.pallidum:91

M3XJ13              	100.00%		D3BFL2              	100.00%
Bootstrap support for M3XJ13 as seed ortholog is 100%.
Bootstrap support for D3BFL2 as seed ortholog is 100%.

Group of orthologs #2309. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 P.pallidum:91

H3B5U9              	100.00%		D3BU32              	100.00%
Bootstrap support for H3B5U9 as seed ortholog is 100%.
Bootstrap support for D3BU32 as seed ortholog is 100%.

Group of orthologs #2310. Best score 90 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 P.pallidum:90

H3AWQ3              	100.00%		D3BBK6              	100.00%
H3ANV8              	10.28%		
H3BEK9              	8.27%		
M3XLI2              	8.27%		
H3B648              	5.14%		
Bootstrap support for H3AWQ3 as seed ortholog is 100%.
Bootstrap support for D3BBK6 as seed ortholog is 100%.

Group of orthologs #2311. Best score 90 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 P.pallidum:90

M3XJ79              	100.00%		D3BS89              	100.00%
M3XK67              	100.00%		
Bootstrap support for M3XJ79 as seed ortholog is 100%.
Bootstrap support for M3XK67 as seed ortholog is 100%.
Bootstrap support for D3BS89 as seed ortholog is 100%.

Group of orthologs #2312. Best score 90 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 P.pallidum:90

H3AZ01              	100.00%		D3AXG1              	100.00%
Bootstrap support for H3AZ01 as seed ortholog is 100%.
Bootstrap support for D3AXG1 as seed ortholog is 100%.

Group of orthologs #2313. Best score 90 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 P.pallidum:90

H3AE73              	100.00%		D3BKU0              	100.00%
Bootstrap support for H3AE73 as seed ortholog is 100%.
Bootstrap support for D3BKU0 as seed ortholog is 100%.

Group of orthologs #2314. Best score 90 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 P.pallidum:90

H3B200              	100.00%		D3B9I6              	100.00%
Bootstrap support for H3B200 as seed ortholog is 100%.
Bootstrap support for D3B9I6 as seed ortholog is 100%.

Group of orthologs #2315. Best score 90 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 P.pallidum:90

H3B1C9              	100.00%		D3BFQ3              	100.00%
Bootstrap support for H3B1C9 as seed ortholog is 100%.
Bootstrap support for D3BFQ3 as seed ortholog is 100%.

Group of orthologs #2316. Best score 90 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 P.pallidum:90

H3B7A1              	100.00%		D3BLY6              	100.00%
Bootstrap support for H3B7A1 as seed ortholog is 100%.
Bootstrap support for D3BLY6 as seed ortholog is 100%.

Group of orthologs #2317. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 P.pallidum:89

H3B8K9              	100.00%		D3AY18              	100.00%
H2ZUD9              	67.77%		
H3AYL8              	63.25%		
H2ZYK2              	14.76%		
H3AQS2              	7.23%		
Bootstrap support for H3B8K9 as seed ortholog is 100%.
Bootstrap support for D3AY18 as seed ortholog is 100%.

Group of orthologs #2318. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:30 P.pallidum:89

H3BI98              	100.00%		D3AXM2              	100.00%
H3ASH6              	35.61%		
H3A0H0              	35.35%		
Bootstrap support for H3BI98 as seed ortholog is 81%.
Bootstrap support for D3AXM2 as seed ortholog is 100%.

Group of orthologs #2319. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 P.pallidum:89

H3ATI4              	100.00%		D3AXH5              	100.00%
Bootstrap support for H3ATI4 as seed ortholog is 100%.
Bootstrap support for D3AXH5 as seed ortholog is 100%.

Group of orthologs #2320. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 P.pallidum:89

H3AEW2              	100.00%		D3BFK4              	100.00%
Bootstrap support for H3AEW2 as seed ortholog is 100%.
Bootstrap support for D3BFK4 as seed ortholog is 100%.

Group of orthologs #2321. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 P.pallidum:89

H3A3M1              	100.00%		D3BUC3              	100.00%
Bootstrap support for H3A3M1 as seed ortholog is 100%.
Bootstrap support for D3BUC3 as seed ortholog is 100%.

Group of orthologs #2322. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 P.pallidum:89

H3BFF6              	100.00%		D3BAV8              	100.00%
Bootstrap support for H3BFF6 as seed ortholog is 100%.
Bootstrap support for D3BAV8 as seed ortholog is 100%.

Group of orthologs #2323. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 P.pallidum:89

H3B9V9              	100.00%		D3BQ01              	100.00%
Bootstrap support for H3B9V9 as seed ortholog is 100%.
Bootstrap support for D3BQ01 as seed ortholog is 100%.

Group of orthologs #2324. Best score 88 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 P.pallidum:88

H3BIA1              	100.00%		D3BNG4              	100.00%
H3B7T3              	100.00%		D3B654              	100.00%
H3B0A6              	51.07%		D3BKP4              	9.93%
                    	       		D3B834              	5.55%
                    	       		D3B6L0              	5.18%
Bootstrap support for H3BIA1 as seed ortholog is 100%.
Bootstrap support for H3B7T3 as seed ortholog is 100%.
Bootstrap support for D3BNG4 as seed ortholog is 100%.
Bootstrap support for D3B654 as seed ortholog is 100%.

Group of orthologs #2325. Best score 88 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 P.pallidum:88

H3ATN9              	100.00%		D3AVS8              	100.00%
H3ASF1              	34.88%		
H3B176              	13.15%		
Bootstrap support for H3ATN9 as seed ortholog is 100%.
Bootstrap support for D3AVS8 as seed ortholog is 100%.

Group of orthologs #2326. Best score 88 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 P.pallidum:88

M3XK04              	100.00%		D3B610              	100.00%
H3ADB0              	20.14%		
H3A2V4              	15.08%		
Bootstrap support for M3XK04 as seed ortholog is 100%.
Bootstrap support for D3B610 as seed ortholog is 100%.

Group of orthologs #2327. Best score 88 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 P.pallidum:88

H3AZR4              	100.00%		D3B031              	100.00%
Bootstrap support for H3AZR4 as seed ortholog is 100%.
Bootstrap support for D3B031 as seed ortholog is 100%.

Group of orthologs #2328. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 P.pallidum:87

H3ALB9              	100.00%		D3BNZ0              	100.00%
H3B6D6              	36.13%		
Bootstrap support for H3ALB9 as seed ortholog is 100%.
Bootstrap support for D3BNZ0 as seed ortholog is 100%.

Group of orthologs #2329. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 P.pallidum:87

H3AS61              	100.00%		D3BKE3              	100.00%
H3BCF9              	100.00%		
Bootstrap support for H3AS61 as seed ortholog is 100%.
Bootstrap support for H3BCF9 as seed ortholog is 100%.
Bootstrap support for D3BKE3 as seed ortholog is 100%.

Group of orthologs #2330. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 P.pallidum:87

H3A2U1              	100.00%		D3BDS4              	100.00%
Bootstrap support for H3A2U1 as seed ortholog is 100%.
Bootstrap support for D3BDS4 as seed ortholog is 100%.

Group of orthologs #2331. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 P.pallidum:87

H3AIA8              	100.00%		D3BEE9              	100.00%
Bootstrap support for H3AIA8 as seed ortholog is 100%.
Bootstrap support for D3BEE9 as seed ortholog is 100%.

Group of orthologs #2332. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 P.pallidum:87

H3B149              	100.00%		D3B3B7              	100.00%
Bootstrap support for H3B149 as seed ortholog is 100%.
Bootstrap support for D3B3B7 as seed ortholog is 100%.

Group of orthologs #2333. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:18 P.pallidum:35

H3AWA0              	100.00%		D3BC71              	100.00%
Bootstrap support for H3AWA0 as seed ortholog is 77%.
Bootstrap support for D3BC71 as seed ortholog is 92%.

Group of orthologs #2334. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 P.pallidum:87

H3AMY4              	100.00%		D3BJE0              	100.00%
Bootstrap support for H3AMY4 as seed ortholog is 100%.
Bootstrap support for D3BJE0 as seed ortholog is 100%.

Group of orthologs #2335. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 P.pallidum:87

H3BEQ0              	100.00%		D3AWW2              	100.00%
Bootstrap support for H3BEQ0 as seed ortholog is 100%.
Bootstrap support for D3AWW2 as seed ortholog is 100%.

Group of orthologs #2336. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:11 P.pallidum:87

H3BB61              	100.00%		D3BCV8              	100.00%
Bootstrap support for H3BB61 as seed ortholog is 56%.
Alternative seed ortholog is H3AAV2 (11 bits away from this cluster)
Bootstrap support for D3BCV8 as seed ortholog is 100%.

Group of orthologs #2337. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.pallidum:86

M3XHU6              	100.00%		D3BNF6              	100.00%
H3AWV9              	37.79%		
H3BF21              	23.28%		
H3B0R7              	19.85%		
Bootstrap support for M3XHU6 as seed ortholog is 100%.
Bootstrap support for D3BNF6 as seed ortholog is 100%.

Group of orthologs #2338. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.pallidum:86

H3A8E4              	100.00%		D3B7V3              	100.00%
H3AHQ2              	24.72%		
Bootstrap support for H3A8E4 as seed ortholog is 100%.
Bootstrap support for D3B7V3 as seed ortholog is 100%.

Group of orthologs #2339. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.pallidum:10

H3ABU3              	100.00%		D3B9H9              	100.00%
H3AXL9              	57.73%		
Bootstrap support for H3ABU3 as seed ortholog is 100%.
Bootstrap support for D3B9H9 as seed ortholog is 85%.

Group of orthologs #2340. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.pallidum:86

H3A3G0              	100.00%		D3BHV2              	100.00%
H3B7Y4              	72.05%		
Bootstrap support for H3A3G0 as seed ortholog is 100%.
Bootstrap support for D3BHV2 as seed ortholog is 100%.

Group of orthologs #2341. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.pallidum:86

H3AM10              	100.00%		D3AY79              	100.00%
Bootstrap support for H3AM10 as seed ortholog is 100%.
Bootstrap support for D3AY79 as seed ortholog is 100%.

Group of orthologs #2342. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.pallidum:38

H2ZRU6              	100.00%		D3BVM5              	100.00%
Bootstrap support for H2ZRU6 as seed ortholog is 100%.
Bootstrap support for D3BVM5 as seed ortholog is 98%.

Group of orthologs #2343. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.pallidum:86

H3AJE1              	100.00%		D3BAP9              	100.00%
Bootstrap support for H3AJE1 as seed ortholog is 100%.
Bootstrap support for D3BAP9 as seed ortholog is 100%.

Group of orthologs #2344. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.pallidum:86

H3B7Q3              	100.00%		D3AZ78              	100.00%
Bootstrap support for H3B7Q3 as seed ortholog is 100%.
Bootstrap support for D3AZ78 as seed ortholog is 100%.

Group of orthologs #2345. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.pallidum:86

H3AR98              	100.00%		D3BEW1              	100.00%
Bootstrap support for H3AR98 as seed ortholog is 100%.
Bootstrap support for D3BEW1 as seed ortholog is 100%.

Group of orthologs #2346. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.pallidum:37

H3AT62              	100.00%		D3BE95              	100.00%
Bootstrap support for H3AT62 as seed ortholog is 100%.
Bootstrap support for D3BE95 as seed ortholog is 90%.

Group of orthologs #2347. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.pallidum:86

H3B2M9              	100.00%		D3BE21              	100.00%
Bootstrap support for H3B2M9 as seed ortholog is 100%.
Bootstrap support for D3BE21 as seed ortholog is 100%.

Group of orthologs #2348. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.pallidum:86

H3AWB1              	100.00%		D3BQH9              	100.00%
Bootstrap support for H3AWB1 as seed ortholog is 100%.
Bootstrap support for D3BQH9 as seed ortholog is 100%.

Group of orthologs #2349. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 P.pallidum:86

H3BCV8              	100.00%		D3BDR2              	100.00%
Bootstrap support for H3BCV8 as seed ortholog is 100%.
Bootstrap support for D3BDR2 as seed ortholog is 100%.

Group of orthologs #2350. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.pallidum:85

H3A4Q8              	100.00%		D3BNG6              	100.00%
H2ZUF4              	67.54%		
H3AFR0              	61.75%		
H2ZZ38              	55.39%		
H2ZYG7              	50.51%		
H3B6B6              	47.90%		
H3B2T0              	46.99%		
H3A8C1              	43.25%		
H2ZUG7              	41.88%		
H2ZZC7              	41.77%		
H2ZTF0              	41.77%		
H3A2X4              	33.37%		
H2ZSA8              	33.26%		
H2ZVM7              	30.08%		
H2ZY82              	28.15%		
H3AEL8              	23.61%		
H3B2S6              	23.50%		
H3ARK8              	21.57%		
H2ZZ23              	21.23%		
H3AYG0              	21.00%		
H3AE71              	20.54%		
H3B0N1              	20.43%		
H3ABE3              	20.32%		
H3B1P0              	20.32%		
H3AZG7              	19.75%		
H3B217              	19.75%		
H3B148              	19.30%		
H3AC95              	17.82%		
H3AB24              	17.37%		
H2ZZ61              	17.25%		
H3B345              	17.03%		
H3B398              	16.46%		
H3BI13              	16.12%		
H3B4F6              	16.00%		
H3AFC0              	15.78%		
H3B1F9              	15.55%		
H2ZUJ2              	15.10%		
H3A0N4              	13.17%		
H3B0L9              	12.49%		
H3A7V3              	9.99%		
H3A925              	7.72%		
H3AS96              	7.15%		
H3A9T5              	6.47%		
H3A8A7              	6.13%		
H3BGF9              	6.02%		
H3ALY7              	6.02%		
Bootstrap support for H3A4Q8 as seed ortholog is 100%.
Bootstrap support for D3BNG6 as seed ortholog is 100%.

Group of orthologs #2351. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.pallidum:85

H3BI65              	100.00%		D3BFE1              	100.00%
H3B5Q9              	57.38%		
H3AG90              	38.01%		
Bootstrap support for H3BI65 as seed ortholog is 100%.
Bootstrap support for D3BFE1 as seed ortholog is 100%.

Group of orthologs #2352. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.pallidum:85

H3AD63              	100.00%		D3BSM0              	100.00%
H3A5H5              	35.99%		
Bootstrap support for H3AD63 as seed ortholog is 100%.
Bootstrap support for D3BSM0 as seed ortholog is 100%.

Group of orthologs #2353. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.pallidum:85

H3A6Z9              	100.00%		D3AYK1              	100.00%
Bootstrap support for H3A6Z9 as seed ortholog is 100%.
Bootstrap support for D3AYK1 as seed ortholog is 100%.

Group of orthologs #2354. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.pallidum:85

H3A555              	100.00%		D3B5I0              	100.00%
Bootstrap support for H3A555 as seed ortholog is 100%.
Bootstrap support for D3B5I0 as seed ortholog is 100%.

Group of orthologs #2355. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.pallidum:85

H2ZSU7              	100.00%		D3BL09              	100.00%
Bootstrap support for H2ZSU7 as seed ortholog is 100%.
Bootstrap support for D3BL09 as seed ortholog is 100%.

Group of orthologs #2356. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:35 P.pallidum:85

H3AI50              	100.00%		D3BCL9              	100.00%
Bootstrap support for H3AI50 as seed ortholog is 91%.
Bootstrap support for D3BCL9 as seed ortholog is 100%.

Group of orthologs #2357. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.pallidum:85

H3AV09              	100.00%		D3BMX6              	100.00%
Bootstrap support for H3AV09 as seed ortholog is 100%.
Bootstrap support for D3BMX6 as seed ortholog is 100%.

Group of orthologs #2358. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.pallidum:85

M3XHW8              	100.00%		D3B2J3              	100.00%
Bootstrap support for M3XHW8 as seed ortholog is 100%.
Bootstrap support for D3B2J3 as seed ortholog is 100%.

Group of orthologs #2359. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 P.pallidum:31

H3B5S5              	100.00%		D3BIM3              	100.00%
Bootstrap support for H3B5S5 as seed ortholog is 100%.
Bootstrap support for D3BIM3 as seed ortholog is 57%.
Alternative seed ortholog is D3BB80 (31 bits away from this cluster)

Group of orthologs #2360. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.pallidum:84

H3BGE0              	100.00%		D3BER7              	100.00%
H3BD16              	100.00%		D3BDI2              	100.00%
M3XJ04              	46.48%		D3BBU9              	51.20%
H3A577              	33.01%		
H2ZVW8              	31.21%		
H2ZX96              	28.15%		
Bootstrap support for H3BGE0 as seed ortholog is 100%.
Bootstrap support for H3BD16 as seed ortholog is 100%.
Bootstrap support for D3BER7 as seed ortholog is 100%.
Bootstrap support for D3BDI2 as seed ortholog is 100%.

Group of orthologs #2361. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.pallidum:84

H2ZSS4              	100.00%		D3B1G7              	100.00%
H3AA10              	56.62%		
H3ANF1              	7.59%		
H3A8I4              	6.46%		
Bootstrap support for H2ZSS4 as seed ortholog is 100%.
Bootstrap support for D3B1G7 as seed ortholog is 100%.

Group of orthologs #2362. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.pallidum:84

H3A1R6              	100.00%		D3AW30              	100.00%
Bootstrap support for H3A1R6 as seed ortholog is 100%.
Bootstrap support for D3AW30 as seed ortholog is 100%.

Group of orthologs #2363. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.pallidum:84

H2ZVM5              	100.00%		D3BFU3              	100.00%
Bootstrap support for H2ZVM5 as seed ortholog is 100%.
Bootstrap support for D3BFU3 as seed ortholog is 100%.

Group of orthologs #2364. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.pallidum:4

H3AAP4              	100.00%		D3B7L9              	100.00%
Bootstrap support for H3AAP4 as seed ortholog is 100%.
Bootstrap support for D3B7L9 as seed ortholog is 45%.
Alternative seed ortholog is D3B7X8 (4 bits away from this cluster)

Group of orthologs #2365. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:7 P.pallidum:84

H3AT76              	100.00%		D3B646              	100.00%
Bootstrap support for H3AT76 as seed ortholog is 82%.
Bootstrap support for D3B646 as seed ortholog is 100%.

Group of orthologs #2366. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.pallidum:84

H3AN07              	100.00%		D3BU60              	100.00%
Bootstrap support for H3AN07 as seed ortholog is 100%.
Bootstrap support for D3BU60 as seed ortholog is 100%.

Group of orthologs #2367. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 P.pallidum:84

H3BHW7              	100.00%		D3BC46              	100.00%
Bootstrap support for H3BHW7 as seed ortholog is 100%.
Bootstrap support for D3BC46 as seed ortholog is 100%.

Group of orthologs #2368. Best score 83 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 P.pallidum:83

H3ADH1              	11.54%		D3B679              	100.00%
H2ZZY6              	100.00%		D3B897              	100.00%
H3BID4              	10.81%		D3BJ33              	9.95%
H3AVI5              	10.54%		
Bootstrap support for H2ZZY6 as seed ortholog is 100%.
Bootstrap support for D3B679 as seed ortholog is 100%.
Bootstrap support for D3B897 as seed ortholog is 100%.

Group of orthologs #2369. Best score 83 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 P.pallidum:1

H2ZYY0              	100.00%		D3BG57              	100.00%
                    	       		D3B8N8              	39.37%
                    	       		D3BV73              	28.44%
Bootstrap support for H2ZYY0 as seed ortholog is 100%.
Bootstrap support for D3BG57 as seed ortholog is 52%.
Alternative seed ortholog is D3B4F3 (1 bits away from this cluster)

Group of orthologs #2370. Best score 83 bits
Score difference with first non-orthologous sequence - L.chalumnae:20 P.pallidum:83

H3BDZ0              	100.00%		D3BN85              	100.00%
M3XHT0              	48.02%		
H3AJR0              	11.31%		
Bootstrap support for H3BDZ0 as seed ortholog is 63%.
Alternative seed ortholog is H2ZYS2 (20 bits away from this cluster)
Bootstrap support for D3BN85 as seed ortholog is 100%.

Group of orthologs #2371. Best score 83 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 P.pallidum:83

H3A0K9              	100.00%		D3BFS6              	100.00%
H3AYA7              	15.95%		
Bootstrap support for H3A0K9 as seed ortholog is 100%.
Bootstrap support for D3BFS6 as seed ortholog is 100%.

Group of orthologs #2372. Best score 83 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 P.pallidum:83

H2ZX31              	100.00%		D3BDM3              	100.00%
Bootstrap support for H2ZX31 as seed ortholog is 100%.
Bootstrap support for D3BDM3 as seed ortholog is 100%.

Group of orthologs #2373. Best score 83 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 P.pallidum:83

H3AVE4              	100.00%		D3AWC8              	100.00%
Bootstrap support for H3AVE4 as seed ortholog is 100%.
Bootstrap support for D3AWC8 as seed ortholog is 100%.

Group of orthologs #2374. Best score 83 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 P.pallidum:83

H3AUY9              	100.00%		D3BBP1              	100.00%
Bootstrap support for H3AUY9 as seed ortholog is 100%.
Bootstrap support for D3BBP1 as seed ortholog is 100%.

Group of orthologs #2375. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.pallidum:82

H3AD42              	100.00%		D3B811              	100.00%
H3A226              	60.88%		
H3B5J1              	55.37%		
Bootstrap support for H3AD42 as seed ortholog is 100%.
Bootstrap support for D3B811 as seed ortholog is 100%.

Group of orthologs #2376. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.pallidum:82

H3AP15              	100.00%		D3BT65              	100.00%
H3B0C9              	48.34%		
Bootstrap support for H3AP15 as seed ortholog is 100%.
Bootstrap support for D3BT65 as seed ortholog is 100%.

Group of orthologs #2377. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.pallidum:82

M3XKC6              	100.00%		D3BKG9              	100.00%
M3XHR8              	51.57%		
Bootstrap support for M3XKC6 as seed ortholog is 100%.
Bootstrap support for D3BKG9 as seed ortholog is 100%.

Group of orthologs #2378. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.pallidum:82

H3AGY8              	100.00%		D3B4P6              	100.00%
Bootstrap support for H3AGY8 as seed ortholog is 100%.
Bootstrap support for D3B4P6 as seed ortholog is 100%.

Group of orthologs #2379. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.pallidum:82

H3AKZ4              	100.00%		D3B5U8              	100.00%
Bootstrap support for H3AKZ4 as seed ortholog is 100%.
Bootstrap support for D3B5U8 as seed ortholog is 100%.

Group of orthologs #2380. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.pallidum:82

H3A3F3              	100.00%		D3BP63              	100.00%
Bootstrap support for H3A3F3 as seed ortholog is 100%.
Bootstrap support for D3BP63 as seed ortholog is 100%.

Group of orthologs #2381. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.pallidum:82

H3A2S6              	100.00%		D3BS64              	100.00%
Bootstrap support for H3A2S6 as seed ortholog is 100%.
Bootstrap support for D3BS64 as seed ortholog is 100%.

Group of orthologs #2382. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.pallidum:82

H3AC77              	100.00%		D3BTI0              	100.00%
Bootstrap support for H3AC77 as seed ortholog is 100%.
Bootstrap support for D3BTI0 as seed ortholog is 100%.

Group of orthologs #2383. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.pallidum:82

H3AFW2              	100.00%		D3BTD8              	100.00%
Bootstrap support for H3AFW2 as seed ortholog is 100%.
Bootstrap support for D3BTD8 as seed ortholog is 100%.

Group of orthologs #2384. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.pallidum:82

H3AQL8              	100.00%		D3BLH5              	100.00%
Bootstrap support for H3AQL8 as seed ortholog is 100%.
Bootstrap support for D3BLH5 as seed ortholog is 100%.

Group of orthologs #2385. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.pallidum:82

H3BEF9              	100.00%		D3BCS0              	100.00%
Bootstrap support for H3BEF9 as seed ortholog is 100%.
Bootstrap support for D3BCS0 as seed ortholog is 100%.

Group of orthologs #2386. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.pallidum:82

M3XI51              	100.00%		D3BFT1              	100.00%
Bootstrap support for M3XI51 as seed ortholog is 100%.
Bootstrap support for D3BFT1 as seed ortholog is 100%.

Group of orthologs #2387. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 P.pallidum:82

H3BG56              	100.00%		D3BMQ4              	100.00%
Bootstrap support for H3BG56 as seed ortholog is 100%.
Bootstrap support for D3BMQ4 as seed ortholog is 100%.

Group of orthologs #2388. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.pallidum:81

H3AT45              	100.00%		D3B7G4              	100.00%
H3BAC9              	100.00%		D3B7G7              	100.00%
H3BBN2              	100.00%		D3B7G5              	100.00%
H3ABY4              	61.52%		D3B7G6              	37.92%
H3ATQ8              	54.95%		
H3AE86              	39.00%		
H3B110              	37.96%		
H3AE46              	26.38%		
H3ABV4              	25.34%		
M3XH33              	22.27%		
H2ZXI5              	20.76%		
H3ASF4              	20.38%		
H3ACA2              	19.81%		
M3XGT4              	14.16%		
H3AZL0              	13.09%		
M3XGH9              	12.90%		
H2ZU91              	11.63%		
H3ACZ0              	11.54%		
H3AFQ8              	7.72%		
Bootstrap support for H3AT45 as seed ortholog is 100%.
Bootstrap support for H3BAC9 as seed ortholog is 100%.
Bootstrap support for H3BBN2 as seed ortholog is 100%.
Bootstrap support for D3B7G4 as seed ortholog is 100%.
Bootstrap support for D3B7G7 as seed ortholog is 100%.
Bootstrap support for D3B7G5 as seed ortholog is 100%.

Group of orthologs #2389. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:7 P.pallidum:81

H3B6A9              	100.00%		D3BRK0              	100.00%
H3ACT6              	36.48%		D3BKW4              	7.62%
                    	       		D3BLW3              	7.23%
                    	       		D3BGU6              	6.50%
Bootstrap support for H3B6A9 as seed ortholog is 73%.
Alternative seed ortholog is H3ADG0 (7 bits away from this cluster)
Bootstrap support for D3BRK0 as seed ortholog is 100%.

Group of orthologs #2390. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:28 P.pallidum:19

H3A0M0              	100.00%		D3B6Q8              	100.00%
H2ZWT1              	49.85%		
H3AUR0              	46.50%		
H3A4U3              	6.38%		
Bootstrap support for H3A0M0 as seed ortholog is 94%.
Bootstrap support for D3B6Q8 as seed ortholog is 81%.

Group of orthologs #2391. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.pallidum:81

H2ZWX8              	100.00%		D3BL91              	100.00%
H3AWS9              	57.63%		
H3A1C4              	16.27%		
Bootstrap support for H2ZWX8 as seed ortholog is 100%.
Bootstrap support for D3BL91 as seed ortholog is 100%.

Group of orthologs #2392. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.pallidum:81

H3A1M7              	100.00%		D3B549              	100.00%
                    	       		D3BGM2              	34.95%
Bootstrap support for H3A1M7 as seed ortholog is 100%.
Bootstrap support for D3B549 as seed ortholog is 100%.

Group of orthologs #2393. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.pallidum:81

H3ADC8              	100.00%		D3BG33              	100.00%
H3BE62              	34.00%		
Bootstrap support for H3ADC8 as seed ortholog is 100%.
Bootstrap support for D3BG33 as seed ortholog is 100%.

Group of orthologs #2394. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.pallidum:81

H3AT90              	100.00%		D3B402              	100.00%
H3AY80              	34.91%		
Bootstrap support for H3AT90 as seed ortholog is 100%.
Bootstrap support for D3B402 as seed ortholog is 100%.

Group of orthologs #2395. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.pallidum:81

H3AF77              	100.00%		D3B9S9              	100.00%
Bootstrap support for H3AF77 as seed ortholog is 100%.
Bootstrap support for D3B9S9 as seed ortholog is 100%.

Group of orthologs #2396. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.pallidum:81

H3AD70              	100.00%		D3BC47              	100.00%
Bootstrap support for H3AD70 as seed ortholog is 100%.
Bootstrap support for D3BC47 as seed ortholog is 100%.

Group of orthologs #2397. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:14 P.pallidum:81

H2ZX33              	100.00%		D3BSQ2              	100.00%
Bootstrap support for H2ZX33 as seed ortholog is 64%.
Alternative seed ortholog is H3B579 (14 bits away from this cluster)
Bootstrap support for D3BSQ2 as seed ortholog is 100%.

Group of orthologs #2398. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.pallidum:81

H3B8T5              	100.00%		D3AVT1              	100.00%
Bootstrap support for H3B8T5 as seed ortholog is 100%.
Bootstrap support for D3AVT1 as seed ortholog is 100%.

Group of orthologs #2399. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.pallidum:81

H3B714              	100.00%		D3AY01              	100.00%
Bootstrap support for H3B714 as seed ortholog is 100%.
Bootstrap support for D3AY01 as seed ortholog is 100%.

Group of orthologs #2400. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.pallidum:81

H3B5Z5              	100.00%		D3B3S6              	100.00%
Bootstrap support for H3B5Z5 as seed ortholog is 100%.
Bootstrap support for D3B3S6 as seed ortholog is 100%.

Group of orthologs #2401. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.pallidum:81

H3AY33              	100.00%		D3BF34              	100.00%
Bootstrap support for H3AY33 as seed ortholog is 100%.
Bootstrap support for D3BF34 as seed ortholog is 100%.

Group of orthologs #2402. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 P.pallidum:81

H3AYR1              	100.00%		D3BTK4              	100.00%
Bootstrap support for H3AYR1 as seed ortholog is 100%.
Bootstrap support for D3BTK4 as seed ortholog is 100%.

Group of orthologs #2403. Best score 80 bits
Score difference with first non-orthologous sequence - L.chalumnae:6 P.pallidum:80

H3AC81              	100.00%		D3BSH1              	40.84%
H3AXH4              	100.00%		D3BRA4              	100.00%
H3AHZ2              	76.55%		D3BQ37              	27.13%
                    	       		D3AWE8              	14.31%
Bootstrap support for H3AC81 as seed ortholog is 61%.
Alternative seed ortholog is M3XLK5 (6 bits away from this cluster)
Bootstrap support for H3AXH4 as seed ortholog is 60%.
Alternative seed ortholog is M3XLK5 (6 bits away from this cluster)
Bootstrap support for D3BRA4 as seed ortholog is 100%.

Group of orthologs #2404. Best score 80 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 P.pallidum:80

H3AJR8              	100.00%		D3AVS6              	100.00%
                    	       		D3AVS5              	50.69%
                    	       		D3AVS7              	17.51%
Bootstrap support for H3AJR8 as seed ortholog is 100%.
Bootstrap support for D3AVS6 as seed ortholog is 100%.

Group of orthologs #2405. Best score 80 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 P.pallidum:38

H3A225              	100.00%		D3B4K7              	100.00%
Bootstrap support for H3A225 as seed ortholog is 100%.
Bootstrap support for D3B4K7 as seed ortholog is 84%.

Group of orthologs #2406. Best score 80 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 P.pallidum:80

H3A6L4              	100.00%		D3B9U9              	100.00%
Bootstrap support for H3A6L4 as seed ortholog is 100%.
Bootstrap support for D3B9U9 as seed ortholog is 100%.

Group of orthologs #2407. Best score 80 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 P.pallidum:80

H3AWU6              	100.00%		D3BGG5              	100.00%
Bootstrap support for H3AWU6 as seed ortholog is 100%.
Bootstrap support for D3BGG5 as seed ortholog is 100%.

Group of orthologs #2408. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.pallidum:79

H3B4G6              	100.00%		D3AYV2              	100.00%
                    	       		D3AYV3              	41.08%
                    	       		D3BMJ1              	25.48%
                    	       		D3BMF7              	24.20%
                    	       		D3B9X4              	23.89%
                    	       		D3BFL6              	22.61%
                    	       		D3BKW9              	22.61%
                    	       		D3BKS3              	22.29%
Bootstrap support for H3B4G6 as seed ortholog is 100%.
Bootstrap support for D3AYV2 as seed ortholog is 100%.

Group of orthologs #2409. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.pallidum:79

H3A888              	100.00%		D3BAG0              	100.00%
H3AUK3              	31.04%		D3B9K3              	7.98%
Bootstrap support for H3A888 as seed ortholog is 100%.
Bootstrap support for D3BAG0 as seed ortholog is 100%.

Group of orthologs #2410. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.pallidum:79

H3A0E0              	100.00%		D3BD34              	100.00%
H3B4H4              	67.46%		
Bootstrap support for H3A0E0 as seed ortholog is 100%.
Bootstrap support for D3BD34 as seed ortholog is 100%.

Group of orthologs #2411. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.pallidum:79

H3B330              	100.00%		D3B4A4              	100.00%
H3B7L8              	75.49%		
Bootstrap support for H3B330 as seed ortholog is 100%.
Bootstrap support for D3B4A4 as seed ortholog is 100%.

Group of orthologs #2412. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.pallidum:79

H3BII4              	100.00%		D3B8S7              	100.00%
H3AVA3              	58.33%		
Bootstrap support for H3BII4 as seed ortholog is 100%.
Bootstrap support for D3B8S7 as seed ortholog is 100%.

Group of orthologs #2413. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.pallidum:79

H3BIN0              	100.00%		D3BKS1              	100.00%
H3ACI1              	48.15%		
Bootstrap support for H3BIN0 as seed ortholog is 100%.
Bootstrap support for D3BKS1 as seed ortholog is 100%.

Group of orthologs #2414. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.pallidum:79

H3A3S9              	100.00%		D3BD55              	100.00%
Bootstrap support for H3A3S9 as seed ortholog is 100%.
Bootstrap support for D3BD55 as seed ortholog is 100%.

Group of orthologs #2415. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.pallidum:79

H3ALB2              	100.00%		D3BBG4              	100.00%
Bootstrap support for H3ALB2 as seed ortholog is 100%.
Bootstrap support for D3BBG4 as seed ortholog is 100%.

Group of orthologs #2416. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.pallidum:79

H3ATT9              	100.00%		D3B7K6              	100.00%
Bootstrap support for H3ATT9 as seed ortholog is 100%.
Bootstrap support for D3B7K6 as seed ortholog is 100%.

Group of orthologs #2417. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.pallidum:79

H3AMV9              	100.00%		D3BMR8              	100.00%
Bootstrap support for H3AMV9 as seed ortholog is 100%.
Bootstrap support for D3BMR8 as seed ortholog is 100%.

Group of orthologs #2418. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.pallidum:79

H3ASP6              	100.00%		D3BJE2              	100.00%
Bootstrap support for H3ASP6 as seed ortholog is 100%.
Bootstrap support for D3BJE2 as seed ortholog is 100%.

Group of orthologs #2419. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.pallidum:79

H3AXF9              	100.00%		D3BJY7              	100.00%
Bootstrap support for H3AXF9 as seed ortholog is 100%.
Bootstrap support for D3BJY7 as seed ortholog is 100%.

Group of orthologs #2420. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.pallidum:79

H3ANS9              	100.00%		D3BVD4              	100.00%
Bootstrap support for H3ANS9 as seed ortholog is 100%.
Bootstrap support for D3BVD4 as seed ortholog is 100%.

Group of orthologs #2421. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 P.pallidum:79

H3BBD8              	100.00%		D3BU55              	100.00%
Bootstrap support for H3BBD8 as seed ortholog is 100%.
Bootstrap support for D3BU55 as seed ortholog is 100%.

Group of orthologs #2422. Best score 78 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.pallidum:26

H2ZT76              	100.00%		D3AWJ4              	100.00%
H3ADH9              	23.22%		
H3BAR2              	5.21%		
Bootstrap support for H2ZT76 as seed ortholog is 100%.
Bootstrap support for D3AWJ4 as seed ortholog is 83%.

Group of orthologs #2423. Best score 78 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.pallidum:78

H3AXJ4              	100.00%		D3B3I7              	100.00%
H3AU51              	8.56%		
H2ZSB8              	5.63%		
Bootstrap support for H3AXJ4 as seed ortholog is 100%.
Bootstrap support for D3B3I7 as seed ortholog is 100%.

Group of orthologs #2424. Best score 78 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.pallidum:78

H3BCI3              	100.00%		D3BPM9              	100.00%
                    	       		D3BJM3              	20.36%
                    	       		D3BF30              	10.51%
Bootstrap support for H3BCI3 as seed ortholog is 100%.
Bootstrap support for D3BPM9 as seed ortholog is 100%.

Group of orthologs #2425. Best score 78 bits
Score difference with first non-orthologous sequence - L.chalumnae:16 P.pallidum:19

H2ZY23              	100.00%		D3BAT7              	100.00%
M3XI97              	22.96%		
Bootstrap support for H2ZY23 as seed ortholog is 75%.
Bootstrap support for D3BAT7 as seed ortholog is 82%.

Group of orthologs #2426. Best score 78 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.pallidum:78

H2ZYK6              	100.00%		D3B644              	100.00%
Bootstrap support for H2ZYK6 as seed ortholog is 100%.
Bootstrap support for D3B644 as seed ortholog is 100%.

Group of orthologs #2427. Best score 78 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.pallidum:78

H3AAH0              	100.00%		D3AXS1              	100.00%
Bootstrap support for H3AAH0 as seed ortholog is 100%.
Bootstrap support for D3AXS1 as seed ortholog is 100%.

Group of orthologs #2428. Best score 78 bits
Score difference with first non-orthologous sequence - L.chalumnae:10 P.pallidum:78

H3AAB2              	100.00%		D3BGY8              	100.00%
Bootstrap support for H3AAB2 as seed ortholog is 64%.
Alternative seed ortholog is H3BFM6 (10 bits away from this cluster)
Bootstrap support for D3BGY8 as seed ortholog is 100%.

Group of orthologs #2429. Best score 78 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.pallidum:78

H3B1J4              	100.00%		D3B1P7              	100.00%
Bootstrap support for H3B1J4 as seed ortholog is 100%.
Bootstrap support for D3B1P7 as seed ortholog is 100%.

Group of orthologs #2430. Best score 78 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.pallidum:78

M3XJ92              	100.00%		D3AXR3              	100.00%
Bootstrap support for M3XJ92 as seed ortholog is 100%.
Bootstrap support for D3AXR3 as seed ortholog is 100%.

Group of orthologs #2431. Best score 78 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.pallidum:78

H3B0G2              	100.00%		D3BGD1              	100.00%
Bootstrap support for H3B0G2 as seed ortholog is 100%.
Bootstrap support for D3BGD1 as seed ortholog is 100%.

Group of orthologs #2432. Best score 78 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.pallidum:78

H3B6U4              	100.00%		D3BUH3              	100.00%
Bootstrap support for H3B6U4 as seed ortholog is 100%.
Bootstrap support for D3BUH3 as seed ortholog is 100%.

Group of orthologs #2433. Best score 78 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 P.pallidum:78

H3BIR9              	100.00%		D3BUE5              	100.00%
Bootstrap support for H3BIR9 as seed ortholog is 100%.
Bootstrap support for D3BUE5 as seed ortholog is 100%.

Group of orthologs #2434. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:14 P.pallidum:77

H3AG31              	100.00%		D3BAA3              	100.00%
M3XK98              	100.00%		D3AVG4              	100.00%
H3B008              	55.39%		D3BBA6              	58.53%
Bootstrap support for H3AG31 as seed ortholog is 65%.
Alternative seed ortholog is H3A818 (14 bits away from this cluster)
Bootstrap support for M3XK98 as seed ortholog is 63%.
Alternative seed ortholog is H3A818 (14 bits away from this cluster)
Bootstrap support for D3BAA3 as seed ortholog is 100%.
Bootstrap support for D3AVG4 as seed ortholog is 100%.

Group of orthologs #2435. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:23 P.pallidum:77

H3AF75              	100.00%		D3BAS9              	100.00%
H3BI05              	8.31%		
H3AIP9              	6.06%		
Bootstrap support for H3AF75 as seed ortholog is 75%.
Bootstrap support for D3BAS9 as seed ortholog is 100%.

Group of orthologs #2436. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 P.pallidum:77

H3A7P4              	100.00%		D3AVN1              	100.00%
H3ASS2              	20.00%		
Bootstrap support for H3A7P4 as seed ortholog is 100%.
Bootstrap support for D3AVN1 as seed ortholog is 100%.

Group of orthologs #2437. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 P.pallidum:77

H3BFB4              	100.00%		D3BA35              	100.00%
                    	       		D3BA73              	25.63%
Bootstrap support for H3BFB4 as seed ortholog is 100%.
Bootstrap support for D3BA35 as seed ortholog is 100%.

Group of orthologs #2438. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 P.pallidum:77

H3AK40              	100.00%		D3B591              	100.00%
Bootstrap support for H3AK40 as seed ortholog is 100%.
Bootstrap support for D3B591 as seed ortholog is 100%.

Group of orthologs #2439. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 P.pallidum:77

H3AYG3              	100.00%		D3AXG0              	100.00%
Bootstrap support for H3AYG3 as seed ortholog is 100%.
Bootstrap support for D3AXG0 as seed ortholog is 100%.

Group of orthologs #2440. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 P.pallidum:77

H3AAA8              	100.00%		D3BMW6              	100.00%
Bootstrap support for H3AAA8 as seed ortholog is 100%.
Bootstrap support for D3BMW6 as seed ortholog is 100%.

Group of orthologs #2441. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:34 P.pallidum:77

H3ASV7              	100.00%		D3BP93              	100.00%
Bootstrap support for H3ASV7 as seed ortholog is 91%.
Bootstrap support for D3BP93 as seed ortholog is 100%.

Group of orthologs #2442. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:27 P.pallidum:4

H3AVS3              	100.00%		Q9NDL2              	100.00%
Bootstrap support for H3AVS3 as seed ortholog is 88%.
Bootstrap support for Q9NDL2 as seed ortholog is 45%.
Alternative seed ortholog is D3BHD8 (4 bits away from this cluster)

Group of orthologs #2443. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.pallidum:76

H3AFG6              	100.00%		D3AXI2              	100.00%
H3ADZ3              	30.21%		
H3BBI5              	29.51%		
H3ACV4              	28.47%		
H3BB24              	24.31%		
H3AB17              	23.61%		
H3AC10              	14.93%		
H3AW72              	6.94%		
Bootstrap support for H3AFG6 as seed ortholog is 100%.
Bootstrap support for D3AXI2 as seed ortholog is 100%.

Group of orthologs #2444. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.pallidum:76

H2ZWJ0              	100.00%		D3AWK1              	100.00%
H2ZUS0              	30.75%		
H3AIZ0              	27.46%		
H3A088              	23.88%		
H3AKS3              	21.79%		
H3BAA0              	14.63%		
Bootstrap support for H2ZWJ0 as seed ortholog is 100%.
Bootstrap support for D3AWK1 as seed ortholog is 100%.

Group of orthologs #2445. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.pallidum:76

H3ABE6              	100.00%		D3BF42              	100.00%
H3AFI9              	23.06%		D3BDR7              	6.70%
Bootstrap support for H3ABE6 as seed ortholog is 100%.
Bootstrap support for D3BF42 as seed ortholog is 100%.

Group of orthologs #2446. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.pallidum:76

H3AAC6              	100.00%		D3B637              	100.00%
H3A0I6              	66.32%		
Bootstrap support for H3AAC6 as seed ortholog is 100%.
Bootstrap support for D3B637 as seed ortholog is 100%.

Group of orthologs #2447. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.pallidum:76

H3BI54              	100.00%		D3B2W1              	100.00%
H3B0N2              	21.40%		
Bootstrap support for H3BI54 as seed ortholog is 100%.
Bootstrap support for D3B2W1 as seed ortholog is 100%.

Group of orthologs #2448. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.pallidum:76

H3A5U6              	100.00%		D3B7W9              	100.00%
Bootstrap support for H3A5U6 as seed ortholog is 100%.
Bootstrap support for D3B7W9 as seed ortholog is 100%.

Group of orthologs #2449. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:15 P.pallidum:76

H3ALT5              	100.00%		D3B2U2              	100.00%
Bootstrap support for H3ALT5 as seed ortholog is 82%.
Bootstrap support for D3B2U2 as seed ortholog is 100%.

Group of orthologs #2450. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.pallidum:76

H3BA55              	100.00%		D3B024              	100.00%
Bootstrap support for H3BA55 as seed ortholog is 100%.
Bootstrap support for D3B024 as seed ortholog is 100%.

Group of orthologs #2451. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.pallidum:76

H3ASJ5              	100.00%		D3BIS8              	100.00%
Bootstrap support for H3ASJ5 as seed ortholog is 100%.
Bootstrap support for D3BIS8 as seed ortholog is 100%.

Group of orthologs #2452. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.pallidum:76

H3AWJ8              	100.00%		D3BGZ0              	100.00%
Bootstrap support for H3AWJ8 as seed ortholog is 100%.
Bootstrap support for D3BGZ0 as seed ortholog is 100%.

Group of orthologs #2453. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.pallidum:25

H3AZG3              	100.00%		D3BMI6              	100.00%
Bootstrap support for H3AZG3 as seed ortholog is 100%.
Bootstrap support for D3BMI6 as seed ortholog is 76%.

Group of orthologs #2454. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 P.pallidum:76

H3BIM0              	100.00%		D3BE40              	100.00%
Bootstrap support for H3BIM0 as seed ortholog is 100%.
Bootstrap support for D3BE40 as seed ortholog is 100%.

Group of orthologs #2455. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.pallidum:75

H3A116              	100.00%		D3AXJ9              	100.00%
H3BEW6              	43.26%		
Bootstrap support for H3A116 as seed ortholog is 100%.
Bootstrap support for D3AXJ9 as seed ortholog is 100%.

Group of orthologs #2456. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.pallidum:75

H3AIG3              	100.00%		D3BK43              	100.00%
H3AXX2              	100.00%		
Bootstrap support for H3AIG3 as seed ortholog is 100%.
Bootstrap support for H3AXX2 as seed ortholog is 100%.
Bootstrap support for D3BK43 as seed ortholog is 100%.

Group of orthologs #2457. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:7 P.pallidum:10

H3ASU5              	100.00%		D3BMT2              	100.00%
                    	       		D3B5D3              	5.73%
Bootstrap support for H3ASU5 as seed ortholog is 62%.
Alternative seed ortholog is H3A1T2 (7 bits away from this cluster)
Bootstrap support for D3BMT2 as seed ortholog is 71%.
Alternative seed ortholog is D3BKC0 (10 bits away from this cluster)

Group of orthologs #2458. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.pallidum:75

H3ART5              	100.00%		D3BQJ5              	100.00%
H3AVT3              	31.81%		
Bootstrap support for H3ART5 as seed ortholog is 100%.
Bootstrap support for D3BQJ5 as seed ortholog is 100%.

Group of orthologs #2459. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:13 P.pallidum:75

H2ZU10              	100.00%		D3B538              	100.00%
Bootstrap support for H2ZU10 as seed ortholog is 67%.
Alternative seed ortholog is H2ZY87 (13 bits away from this cluster)
Bootstrap support for D3B538 as seed ortholog is 100%.

Group of orthologs #2460. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.pallidum:75

H3A567              	100.00%		D3AW73              	100.00%
Bootstrap support for H3A567 as seed ortholog is 100%.
Bootstrap support for D3AW73 as seed ortholog is 100%.

Group of orthologs #2461. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.pallidum:75

H2ZU34              	100.00%		D3BE87              	100.00%
Bootstrap support for H2ZU34 as seed ortholog is 100%.
Bootstrap support for D3BE87 as seed ortholog is 100%.

Group of orthologs #2462. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.pallidum:75

H3AHD6              	100.00%		D3B640              	100.00%
Bootstrap support for H3AHD6 as seed ortholog is 100%.
Bootstrap support for D3B640 as seed ortholog is 100%.

Group of orthologs #2463. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.pallidum:75

M3XH21              	100.00%		D3B3E8              	100.00%
Bootstrap support for M3XH21 as seed ortholog is 100%.
Bootstrap support for D3B3E8 as seed ortholog is 100%.

Group of orthologs #2464. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.pallidum:75

H3B8C0              	100.00%		D3BG34              	100.00%
Bootstrap support for H3B8C0 as seed ortholog is 100%.
Bootstrap support for D3BG34 as seed ortholog is 100%.

Group of orthologs #2465. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 P.pallidum:75

H3BEU8              	100.00%		D3BCX7              	100.00%
Bootstrap support for H3BEU8 as seed ortholog is 100%.
Bootstrap support for D3BCX7 as seed ortholog is 100%.

Group of orthologs #2466. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.pallidum:74

H3AXL5              	100.00%		D3BB48              	100.00%
                    	       		D3BRI5              	28.27%
                    	       		D3BFT4              	26.49%
                    	       		D3BKN3              	25.60%
                    	       		D3BBY4              	19.05%
Bootstrap support for H3AXL5 as seed ortholog is 100%.
Bootstrap support for D3BB48 as seed ortholog is 100%.

Group of orthologs #2467. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:23 P.pallidum:74

H3AP64              	100.00%		D3BE38              	100.00%
H3B7K1              	37.72%		
Bootstrap support for H3AP64 as seed ortholog is 80%.
Bootstrap support for D3BE38 as seed ortholog is 100%.

Group of orthologs #2468. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.pallidum:74

H3B848              	100.00%		D3B2C0              	100.00%
H3AJ62              	26.77%		
Bootstrap support for H3B848 as seed ortholog is 100%.
Bootstrap support for D3B2C0 as seed ortholog is 100%.

Group of orthologs #2469. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.pallidum:74

H2ZVL5              	100.00%		D3AWA8              	100.00%
Bootstrap support for H2ZVL5 as seed ortholog is 100%.
Bootstrap support for D3AWA8 as seed ortholog is 100%.

Group of orthologs #2470. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.pallidum:74

H2ZZT7              	100.00%		D3B081              	100.00%
Bootstrap support for H2ZZT7 as seed ortholog is 100%.
Bootstrap support for D3B081 as seed ortholog is 100%.

Group of orthologs #2471. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.pallidum:74

H3A0F6              	100.00%		D3BAU4              	100.00%
Bootstrap support for H3A0F6 as seed ortholog is 100%.
Bootstrap support for D3BAU4 as seed ortholog is 100%.

Group of orthologs #2472. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.pallidum:74

H3ASD2              	100.00%		D3AZW4              	100.00%
Bootstrap support for H3ASD2 as seed ortholog is 100%.
Bootstrap support for D3AZW4 as seed ortholog is 100%.

Group of orthologs #2473. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.pallidum:74

H3B1P6              	100.00%		D3AYJ9              	100.00%
Bootstrap support for H3B1P6 as seed ortholog is 100%.
Bootstrap support for D3AYJ9 as seed ortholog is 100%.

Group of orthologs #2474. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.pallidum:74

H3AXU3              	100.00%		D3BEE0              	100.00%
Bootstrap support for H3AXU3 as seed ortholog is 100%.
Bootstrap support for D3BEE0 as seed ortholog is 100%.

Group of orthologs #2475. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.pallidum:74

H3AWR8              	100.00%		D3BM22              	100.00%
Bootstrap support for H3AWR8 as seed ortholog is 100%.
Bootstrap support for D3BM22 as seed ortholog is 100%.

Group of orthologs #2476. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 P.pallidum:74

H3B7L1              	100.00%		D3BDM9              	100.00%
Bootstrap support for H3B7L1 as seed ortholog is 100%.
Bootstrap support for D3BDM9 as seed ortholog is 100%.

Group of orthologs #2477. Best score 73 bits
Score difference with first non-orthologous sequence - L.chalumnae:73 P.pallidum:9

H2ZSQ6              	100.00%		D3BF69              	100.00%
H3AN68              	35.01%		
H3B237              	23.24%		
Bootstrap support for H2ZSQ6 as seed ortholog is 100%.
Bootstrap support for D3BF69 as seed ortholog is 61%.
Alternative seed ortholog is D3BF33 (9 bits away from this cluster)

Group of orthologs #2478. Best score 73 bits
Score difference with first non-orthologous sequence - L.chalumnae:73 P.pallidum:73

H3A1H7              	100.00%		D3BSK2              	100.00%
H2ZYC6              	34.47%		
Bootstrap support for H3A1H7 as seed ortholog is 100%.
Bootstrap support for D3BSK2 as seed ortholog is 100%.

Group of orthologs #2479. Best score 73 bits
Score difference with first non-orthologous sequence - L.chalumnae:73 P.pallidum:73

H3AFS0              	100.00%		D3AWT5              	100.00%
Bootstrap support for H3AFS0 as seed ortholog is 100%.
Bootstrap support for D3AWT5 as seed ortholog is 100%.

Group of orthologs #2480. Best score 73 bits
Score difference with first non-orthologous sequence - L.chalumnae:73 P.pallidum:73

H2ZRM0              	100.00%		D3BK78              	100.00%
Bootstrap support for H2ZRM0 as seed ortholog is 100%.
Bootstrap support for D3BK78 as seed ortholog is 100%.

Group of orthologs #2481. Best score 73 bits
Score difference with first non-orthologous sequence - L.chalumnae:73 P.pallidum:73

H2ZUT8              	100.00%		D3BPT2              	100.00%
Bootstrap support for H2ZUT8 as seed ortholog is 100%.
Bootstrap support for D3BPT2 as seed ortholog is 100%.

Group of orthologs #2482. Best score 73 bits
Score difference with first non-orthologous sequence - L.chalumnae:73 P.pallidum:73

H3AXF2              	100.00%		D3BBB0              	100.00%
Bootstrap support for H3AXF2 as seed ortholog is 100%.
Bootstrap support for D3BBB0 as seed ortholog is 100%.

Group of orthologs #2483. Best score 73 bits
Score difference with first non-orthologous sequence - L.chalumnae:73 P.pallidum:73

H3ARN4              	100.00%		D3BP65              	100.00%
Bootstrap support for H3ARN4 as seed ortholog is 100%.
Bootstrap support for D3BP65 as seed ortholog is 100%.

Group of orthologs #2484. Best score 73 bits
Score difference with first non-orthologous sequence - L.chalumnae:73 P.pallidum:73

H3BF65              	100.00%		D3BBS5              	100.00%
Bootstrap support for H3BF65 as seed ortholog is 100%.
Bootstrap support for D3BBS5 as seed ortholog is 100%.

Group of orthologs #2485. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:11 P.pallidum:72

M3XL26              	100.00%		D3BAB1              	100.00%
H3BD79              	23.55%		
M3XHI1              	23.55%		
H3A657              	11.53%		
Bootstrap support for M3XL26 as seed ortholog is 97%.
Bootstrap support for D3BAB1 as seed ortholog is 100%.

Group of orthologs #2486. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.pallidum:72

H3AJM7              	100.00%		D3BBP2              	100.00%
H3AG30              	29.99%		
H3AFN9              	22.52%		
Bootstrap support for H3AJM7 as seed ortholog is 100%.
Bootstrap support for D3BBP2 as seed ortholog is 100%.

Group of orthologs #2487. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.pallidum:72

H2ZWN6              	100.00%		D3AWZ2              	100.00%
Bootstrap support for H2ZWN6 as seed ortholog is 100%.
Bootstrap support for D3AWZ2 as seed ortholog is 100%.

Group of orthologs #2488. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.pallidum:72

H3A610              	100.00%		D3AWB5              	100.00%
Bootstrap support for H3A610 as seed ortholog is 100%.
Bootstrap support for D3AWB5 as seed ortholog is 100%.

Group of orthologs #2489. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.pallidum:72

H3AFL9              	100.00%		D3B0E9              	100.00%
Bootstrap support for H3AFL9 as seed ortholog is 100%.
Bootstrap support for D3B0E9 as seed ortholog is 100%.

Group of orthologs #2490. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.pallidum:72

H3APM4              	100.00%		D3BE48              	100.00%
Bootstrap support for H3APM4 as seed ortholog is 100%.
Bootstrap support for D3BE48 as seed ortholog is 100%.

Group of orthologs #2491. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 P.pallidum:72

M3XI40              	100.00%		D3B2L5              	100.00%
Bootstrap support for M3XI40 as seed ortholog is 100%.
Bootstrap support for D3B2L5 as seed ortholog is 100%.

Group of orthologs #2492. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 P.pallidum:71

H3AT28              	100.00%		D3BEQ7              	100.00%
H3AML0              	25.10%		D3B149              	13.51%
Bootstrap support for H3AT28 as seed ortholog is 100%.
Bootstrap support for D3BEQ7 as seed ortholog is 100%.

Group of orthologs #2493. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 P.pallidum:71

H3BFH3              	100.00%		D3BP92              	100.00%
H3BER5              	42.49%		
Bootstrap support for H3BFH3 as seed ortholog is 100%.
Bootstrap support for D3BP92 as seed ortholog is 100%.

Group of orthologs #2494. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 P.pallidum:71

H3AF10              	100.00%		D3B144              	100.00%
Bootstrap support for H3AF10 as seed ortholog is 100%.
Bootstrap support for D3B144 as seed ortholog is 100%.

Group of orthologs #2495. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 P.pallidum:71

H2ZYX5              	100.00%		D3BPL8              	100.00%
Bootstrap support for H2ZYX5 as seed ortholog is 100%.
Bootstrap support for D3BPL8 as seed ortholog is 100%.

Group of orthologs #2496. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 P.pallidum:71

H3BDX0              	100.00%		D3B1N4              	100.00%
Bootstrap support for H3BDX0 as seed ortholog is 100%.
Bootstrap support for D3B1N4 as seed ortholog is 100%.

Group of orthologs #2497. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 P.pallidum:71

H3BAG0              	100.00%		D3BHV3              	100.00%
Bootstrap support for H3BAG0 as seed ortholog is 100%.
Bootstrap support for D3BHV3 as seed ortholog is 100%.

Group of orthologs #2498. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 P.pallidum:71

H3B6D7              	100.00%		D3BPK0              	100.00%
Bootstrap support for H3B6D7 as seed ortholog is 100%.
Bootstrap support for D3BPK0 as seed ortholog is 100%.

Group of orthologs #2499. Best score 70 bits
Score difference with first non-orthologous sequence - L.chalumnae:70 P.pallidum:70

H3A9V9              	100.00%		D3BPF4              	100.00%
                    	       		D3BUQ5              	100.00%
                    	       		D3AZ39              	91.54%
                    	       		D3BAJ2              	73.11%
                    	       		D3B3T6              	33.23%
                    	       		D3B3T7              	31.72%
                    	       		D3BNP5              	31.12%
                    	       		D3BAR5              	29.61%
                    	       		D3BSL8              	14.20%
Bootstrap support for H3A9V9 as seed ortholog is 100%.
Bootstrap support for D3BPF4 as seed ortholog is 100%.
Bootstrap support for D3BUQ5 as seed ortholog is 100%.

Group of orthologs #2500. Best score 70 bits
Score difference with first non-orthologous sequence - L.chalumnae:70 P.pallidum:70

H3APQ1              	100.00%		D3BCY1              	100.00%
H3B972              	42.17%		D3BCY9              	41.24%
Bootstrap support for H3APQ1 as seed ortholog is 100%.
Bootstrap support for D3BCY1 as seed ortholog is 100%.

Group of orthologs #2501. Best score 70 bits
Score difference with first non-orthologous sequence - L.chalumnae:70 P.pallidum:70

H3A8S8              	100.00%		D3AVI4              	100.00%
Bootstrap support for H3A8S8 as seed ortholog is 100%.
Bootstrap support for D3AVI4 as seed ortholog is 100%.

Group of orthologs #2502. Best score 70 bits
Score difference with first non-orthologous sequence - L.chalumnae:70 P.pallidum:70

H3A6T7              	100.00%		D3B4J9              	100.00%
Bootstrap support for H3A6T7 as seed ortholog is 100%.
Bootstrap support for D3B4J9 as seed ortholog is 100%.

Group of orthologs #2503. Best score 70 bits
Score difference with first non-orthologous sequence - L.chalumnae:70 P.pallidum:70

H3AND1              	100.00%		D3AWI0              	100.00%
Bootstrap support for H3AND1 as seed ortholog is 100%.
Bootstrap support for D3AWI0 as seed ortholog is 100%.

Group of orthologs #2504. Best score 70 bits
Score difference with first non-orthologous sequence - L.chalumnae:70 P.pallidum:70

H3AVT9              	100.00%		D3B3I8              	100.00%
Bootstrap support for H3AVT9 as seed ortholog is 100%.
Bootstrap support for D3B3I8 as seed ortholog is 100%.

Group of orthologs #2505. Best score 70 bits
Score difference with first non-orthologous sequence - L.chalumnae:70 P.pallidum:70

H3BAI4              	100.00%		D3B438              	100.00%
Bootstrap support for H3BAI4 as seed ortholog is 100%.
Bootstrap support for D3B438 as seed ortholog is 100%.

Group of orthologs #2506. Best score 70 bits
Score difference with first non-orthologous sequence - L.chalumnae:70 P.pallidum:70

H3B9L3              	100.00%		D3BNN0              	100.00%
Bootstrap support for H3B9L3 as seed ortholog is 100%.
Bootstrap support for D3BNN0 as seed ortholog is 100%.

Group of orthologs #2507. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 P.pallidum:69

H3ATV1              	100.00%		D3BCT7              	100.00%
H3A0Q3              	22.22%		
Bootstrap support for H3ATV1 as seed ortholog is 100%.
Bootstrap support for D3BCT7 as seed ortholog is 100%.

Group of orthologs #2508. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 P.pallidum:5

H3AS18              	100.00%		D3BJW9              	100.00%
H3B2D0              	18.78%		
Bootstrap support for H3AS18 as seed ortholog is 100%.
Bootstrap support for D3BJW9 as seed ortholog is 43%.
Alternative seed ortholog is D3BQ72 (5 bits away from this cluster)

Group of orthologs #2509. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 P.pallidum:69

H3AAY1              	100.00%		D3BT15              	100.00%
Bootstrap support for H3AAY1 as seed ortholog is 100%.
Bootstrap support for D3BT15 as seed ortholog is 100%.

Group of orthologs #2510. Best score 68 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 P.pallidum:68

H3B4D6              	100.00%		D3B5X1              	100.00%
H3B2Z3              	14.42%		
H3B366              	9.30%		
Bootstrap support for H3B4D6 as seed ortholog is 100%.
Bootstrap support for D3B5X1 as seed ortholog is 100%.

Group of orthologs #2511. Best score 68 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 P.pallidum:68

M3XKW9              	100.00%		D3BJL5              	100.00%
H3AZW8              	12.06%		
Bootstrap support for M3XKW9 as seed ortholog is 100%.
Bootstrap support for D3BJL5 as seed ortholog is 100%.

Group of orthologs #2512. Best score 68 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 P.pallidum:68

H3AKG3              	100.00%		D3B8C1              	100.00%
Bootstrap support for H3AKG3 as seed ortholog is 100%.
Bootstrap support for D3B8C1 as seed ortholog is 100%.

Group of orthologs #2513. Best score 68 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 P.pallidum:68

H3AQ13              	100.00%		D3B7W8              	100.00%
Bootstrap support for H3AQ13 as seed ortholog is 100%.
Bootstrap support for D3B7W8 as seed ortholog is 100%.

Group of orthologs #2514. Best score 68 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 P.pallidum:68

H3A662              	100.00%		D3BPT1              	100.00%
Bootstrap support for H3A662 as seed ortholog is 100%.
Bootstrap support for D3BPT1 as seed ortholog is 100%.

Group of orthologs #2515. Best score 68 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 P.pallidum:68

H3AXC5              	100.00%		D3B7T1              	100.00%
Bootstrap support for H3AXC5 as seed ortholog is 100%.
Bootstrap support for D3B7T1 as seed ortholog is 100%.

Group of orthologs #2516. Best score 68 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 P.pallidum:68

H3B3V8              	100.00%		D3B7J5              	100.00%
Bootstrap support for H3B3V8 as seed ortholog is 100%.
Bootstrap support for D3B7J5 as seed ortholog is 100%.

Group of orthologs #2517. Best score 68 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 P.pallidum:68

H3BBQ8              	100.00%		D3BQJ2              	100.00%
Bootstrap support for H3BBQ8 as seed ortholog is 100%.
Bootstrap support for D3BQJ2 as seed ortholog is 100%.

Group of orthologs #2518. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.pallidum:67

H3APZ7              	100.00%		D3BK23              	100.00%
H3B642              	71.55%		
H3ATI1              	69.58%		
H3AS73              	65.35%		
H3BFH8              	63.66%		
H3AKE8              	29.30%		
H3AHZ1              	11.83%		
H3A1Y9              	8.17%		
H3ARW9              	5.35%		
Bootstrap support for H3APZ7 as seed ortholog is 100%.
Bootstrap support for D3BK23 as seed ortholog is 100%.

Group of orthologs #2519. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.pallidum:67

H3ACP1              	100.00%		D3B6G0              	100.00%
H2ZU99              	23.10%		
Bootstrap support for H3ACP1 as seed ortholog is 100%.
Bootstrap support for D3B6G0 as seed ortholog is 100%.

Group of orthologs #2520. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.pallidum:67

H3B1J8              	100.00%		D3AWT0              	100.00%
H3ASR7              	28.88%		
Bootstrap support for H3B1J8 as seed ortholog is 100%.
Bootstrap support for D3AWT0 as seed ortholog is 100%.

Group of orthologs #2521. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.pallidum:67

H3AY89              	100.00%		D3BB91              	100.00%
                    	       		D3BQF1              	7.78%
Bootstrap support for H3AY89 as seed ortholog is 100%.
Bootstrap support for D3BB91 as seed ortholog is 100%.

Group of orthologs #2522. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.pallidum:67

H3AW59              	100.00%		D3BK07              	100.00%
M3XHN0              	92.97%		
Bootstrap support for H3AW59 as seed ortholog is 100%.
Bootstrap support for D3BK07 as seed ortholog is 100%.

Group of orthologs #2523. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.pallidum:67

H3BDM3              	100.00%		D3B9K8              	100.00%
H3B9Y9              	43.34%		
Bootstrap support for H3BDM3 as seed ortholog is 100%.
Bootstrap support for D3B9K8 as seed ortholog is 100%.

Group of orthologs #2524. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.pallidum:67

H2ZWW6              	100.00%		D3BDA7              	100.00%
Bootstrap support for H2ZWW6 as seed ortholog is 100%.
Bootstrap support for D3BDA7 as seed ortholog is 100%.

Group of orthologs #2525. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.pallidum:67

H2ZZ56              	100.00%		D3BHC8              	100.00%
Bootstrap support for H2ZZ56 as seed ortholog is 100%.
Bootstrap support for D3BHC8 as seed ortholog is 100%.

Group of orthologs #2526. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.pallidum:67

H3B6J4              	100.00%		D3B6K8              	100.00%
Bootstrap support for H3B6J4 as seed ortholog is 100%.
Bootstrap support for D3B6K8 as seed ortholog is 100%.

Group of orthologs #2527. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 P.pallidum:67

H3BDW8              	100.00%		D3B656              	100.00%
Bootstrap support for H3BDW8 as seed ortholog is 100%.
Bootstrap support for D3B656 as seed ortholog is 100%.

Group of orthologs #2528. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.pallidum:66

H3A9T8              	100.00%		D3BLK3              	100.00%
H3AWP0              	87.07%		D3B6Y9              	49.88%
H3AQQ4              	82.41%		D3B1W5              	44.96%
H3B0G5              	75.41%		D3BK24              	20.15%
H3ATI7              	56.66%		
H3B0S5              	9.72%		
Bootstrap support for H3A9T8 as seed ortholog is 100%.
Bootstrap support for D3BLK3 as seed ortholog is 100%.

Group of orthologs #2529. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.pallidum:66

M3XHQ4              	100.00%		D3B3P0              	100.00%
                    	       		D3BLB6              	65.98%
                    	       		D3B642              	45.88%
                    	       		D3BLB5              	37.11%
                    	       		D3BHX0              	10.31%
Bootstrap support for M3XHQ4 as seed ortholog is 100%.
Bootstrap support for D3B3P0 as seed ortholog is 100%.

Group of orthologs #2530. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.pallidum:66

H3AF80              	100.00%		D3BG96              	100.00%
H3BDW4              	5.84%		
H3A9R9              	5.65%		
H3ARQ4              	5.27%		
Bootstrap support for H3AF80 as seed ortholog is 100%.
Bootstrap support for D3BG96 as seed ortholog is 100%.

Group of orthologs #2531. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.pallidum:66

H3BCN0              	100.00%		D3BPY4              	100.00%
H3AJJ9              	73.49%		
H3B2E3              	35.10%		
Bootstrap support for H3BCN0 as seed ortholog is 100%.
Bootstrap support for D3BPY4 as seed ortholog is 100%.

Group of orthologs #2532. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:18 P.pallidum:66

H3AMK7              	100.00%		D3BFW0              	100.00%
H3ALV5              	11.54%		
Bootstrap support for H3AMK7 as seed ortholog is 69%.
Alternative seed ortholog is H3ATC2 (18 bits away from this cluster)
Bootstrap support for D3BFW0 as seed ortholog is 100%.

Group of orthologs #2533. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.pallidum:66

H3ALI2              	100.00%		D3BPZ9              	100.00%
H3AMB4              	83.98%		
Bootstrap support for H3ALI2 as seed ortholog is 100%.
Bootstrap support for D3BPZ9 as seed ortholog is 100%.

Group of orthologs #2534. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.pallidum:66

H3A8K4              	100.00%		D3B7A4              	100.00%
Bootstrap support for H3A8K4 as seed ortholog is 100%.
Bootstrap support for D3B7A4 as seed ortholog is 100%.

Group of orthologs #2535. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.pallidum:66

H3A820              	100.00%		D3BB82              	100.00%
Bootstrap support for H3A820 as seed ortholog is 100%.
Bootstrap support for D3BB82 as seed ortholog is 100%.

Group of orthologs #2536. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.pallidum:66

H3AM71              	100.00%		D3BFR7              	100.00%
Bootstrap support for H3AM71 as seed ortholog is 100%.
Bootstrap support for D3BFR7 as seed ortholog is 100%.

Group of orthologs #2537. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.pallidum:66

H3B7B0              	100.00%		D3AZ35              	100.00%
Bootstrap support for H3B7B0 as seed ortholog is 100%.
Bootstrap support for D3AZ35 as seed ortholog is 100%.

Group of orthologs #2538. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.pallidum:66

H3AK22              	100.00%		D3BI93              	100.00%
Bootstrap support for H3AK22 as seed ortholog is 100%.
Bootstrap support for D3BI93 as seed ortholog is 100%.

Group of orthologs #2539. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.pallidum:66

H3APD2              	100.00%		D3BIN7              	100.00%
Bootstrap support for H3APD2 as seed ortholog is 100%.
Bootstrap support for D3BIN7 as seed ortholog is 100%.

Group of orthologs #2540. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 P.pallidum:66

H3APT5              	100.00%		D3BU69              	100.00%
Bootstrap support for H3APT5 as seed ortholog is 100%.
Bootstrap support for D3BU69 as seed ortholog is 100%.

Group of orthologs #2541. Best score 65 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 P.pallidum:65

H3AD35              	100.00%		D3BE69              	100.00%
H3AKT0              	100.00%		D3BRN3              	100.00%
H3AAN5              	32.99%		D3BR26              	21.55%
H2ZZ26              	27.83%		D3BQH6              	18.34%
H3A1P2              	26.47%		D3B3Y6              	17.81%
H3AR09              	26.24%		D3BRH1              	16.99%
H3AEZ8              	25.53%		D3AXQ2              	16.75%
H3BC68              	22.07%		D3BE86              	16.59%
H2ZW75              	21.76%		D3BRN0              	15.79%
H3A258              	20.64%		D3BRN6              	13.94%
H3A3G3              	19.72%		D3B3W6              	12.26%
H3A0D5              	18.15%		D3B5J5              	10.58%
H3APG9              	17.52%		D3BPI7              	10.10%
H3A0W3              	17.28%		D3BQ93              	9.13%
H3AVG6              	16.81%		D3BL26              	9.05%
H3ADM7              	16.50%		D3B2Q3              	8.97%
H3AZY7              	16.42%		D3BP19              	8.89%
H3AIP0              	16.26%		D3BUU9              	8.73%
H3BDM1              	16.18%		D3B3G2              	8.65%
H3AGZ5              	15.40%		D3BIV5              	8.33%
H3BAZ1              	14.77%		D3BP18              	8.17%
H2ZWD1              	14.30%		D3AWD5              	7.61%
H3B9Y4              	14.30%		D3BLG9              	7.29%
H3BBG0              	13.84%		D3BLZ5              	7.29%
H2ZXI2              	13.75%		D3B2M0              	7.29%
H2ZUD1              	13.59%		D3BG66              	7.29%
H3B1V6              	12.51%		D3B975              	7.21%
H3AT40              	12.49%		D3BBV9              	7.13%
H3AG78              	12.02%		D3BLZ7              	7.05%
H3AZ24              	11.78%		D3BJ20              	6.97%
H3B7U6              	11.78%		D3BLA6              	6.97%
H3ATV3              	11.08%		D3BUY9              	6.41%
H3ALM0              	10.53%		D3BC62              	6.33%
H3B5B1              	10.45%		D3BD92              	6.33%
H3ACG4              	10.21%		D3BFB8              	6.01%
H3ATJ6              	10.13%		D3BG65              	6.01%
H3AAM7              	9.35%		D3BUL9              	5.93%
H2ZZI5              	9.11%		D3B911              	5.93%
H3ASL9              	8.33%		D3BIU8              	5.85%
H3ABQ0              	8.33%		D3BLD2              	5.77%
H3A090              	8.01%		D3BMZ7              	5.77%
H3AX43              	7.93%		D3BN69              	5.77%
H3ARJ0              	7.70%		D3BG68              	5.53%
H3AW47              	7.31%		D3B8Z7              	5.53%
H3AV36              	7.31%		D3BLB1              	5.53%
H3ASU1              	7.15%		D3BHT2              	5.53%
H3AGD5              	6.80%		D3AW41              	5.37%
H3AQ92              	6.76%		D3BG55              	5.37%
H3AG73              	6.68%		D3BIM5              	5.37%
H3B7J5              	6.21%		D3BA98              	5.29%
H3A1A7              	5.81%		D3BLC4              	5.29%
H3AYZ2              	5.03%		D3BLG4              	5.21%
                    	       		D3BKZ0              	5.21%
                    	       		D3BR53              	5.13%
Bootstrap support for H3AD35 as seed ortholog is 100%.
Bootstrap support for H3AKT0 as seed ortholog is 100%.
Bootstrap support for D3BE69 as seed ortholog is 100%.
Bootstrap support for D3BRN3 as seed ortholog is 100%.

Group of orthologs #2542. Best score 65 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 P.pallidum:65

H2ZTL0              	100.00%		D3AXE1              	100.00%
H3APU4              	40.32%		D3AZQ7              	46.08%
H2ZT72              	24.47%		
H3AA81              	21.13%		
H3AJ26              	16.55%		
H2ZRT1              	14.26%		
H3B3F5              	13.73%		
H3B6N1              	7.57%		
Bootstrap support for H2ZTL0 as seed ortholog is 100%.
Bootstrap support for D3AXE1 as seed ortholog is 100%.

Group of orthologs #2543. Best score 65 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 P.pallidum:65

H2ZRV7              	100.00%		D3BQ73              	100.00%
H3B9N0              	5.57%		D3BFW9              	25.26%
H3A0N0              	5.30%		D3AXQ1              	9.10%
Bootstrap support for H2ZRV7 as seed ortholog is 100%.
Bootstrap support for D3BQ73 as seed ortholog is 100%.

Group of orthologs #2544. Best score 65 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 P.pallidum:65

H3BAN0              	100.00%		D3AZ00              	100.00%
H3A565              	30.92%		D3AX42              	9.07%
H3AGE5              	30.11%		
H2ZT21              	16.44%		
Bootstrap support for H3BAN0 as seed ortholog is 100%.
Bootstrap support for D3AZ00 as seed ortholog is 100%.

Group of orthologs #2545. Best score 65 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 P.pallidum:65

H3ADL5              	100.00%		D3B2M2              	100.00%
H3AFF7              	21.97%		D3B6I5              	24.84%
Bootstrap support for H3ADL5 as seed ortholog is 100%.
Bootstrap support for D3B2M2 as seed ortholog is 100%.

Group of orthologs #2546. Best score 65 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 P.pallidum:65

H3AEJ8              	100.00%		D3BDT9              	100.00%
H3APZ5              	100.00%		D3BB99              	100.00%
Bootstrap support for H3AEJ8 as seed ortholog is 100%.
Bootstrap support for H3APZ5 as seed ortholog is 100%.
Bootstrap support for D3BDT9 as seed ortholog is 100%.
Bootstrap support for D3BB99 as seed ortholog is 100%.

Group of orthologs #2547. Best score 65 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 P.pallidum:65

H3BFW2              	100.00%		D3BUX3              	100.00%
Bootstrap support for H3BFW2 as seed ortholog is 100%.
Bootstrap support for D3BUX3 as seed ortholog is 100%.

Group of orthologs #2548. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.pallidum:64

H3A4D2              	100.00%		D3BTU4              	100.00%
                    	       		D3BTZ8              	26.71%
                    	       		D3BTU5              	24.28%
                    	       		D3BTU6              	22.74%
                    	       		D3BMV8              	7.95%
Bootstrap support for H3A4D2 as seed ortholog is 100%.
Bootstrap support for D3BTU4 as seed ortholog is 100%.

Group of orthologs #2549. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.pallidum:64

H3AUV8              	100.00%		D3BNG7              	100.00%
H3ATF2              	29.08%		
H3BFF2              	6.48%		
Bootstrap support for H3AUV8 as seed ortholog is 100%.
Bootstrap support for D3BNG7 as seed ortholog is 100%.

Group of orthologs #2550. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.pallidum:64

H3A9I8              	100.00%		D3BEJ0              	100.00%
Bootstrap support for H3A9I8 as seed ortholog is 100%.
Bootstrap support for D3BEJ0 as seed ortholog is 100%.

Group of orthologs #2551. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.pallidum:2

H3AN02              	100.00%		D3B4P7              	100.00%
Bootstrap support for H3AN02 as seed ortholog is 100%.
Bootstrap support for D3B4P7 as seed ortholog is 55%.
Alternative seed ortholog is D3BFW2 (2 bits away from this cluster)

Group of orthologs #2552. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:16 P.pallidum:64

H3B4B0              	100.00%		D3B5K9              	100.00%
Bootstrap support for H3B4B0 as seed ortholog is 79%.
Bootstrap support for D3B5K9 as seed ortholog is 100%.

Group of orthologs #2553. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.pallidum:64

H3B9R5              	100.00%		D3B163              	100.00%
Bootstrap support for H3B9R5 as seed ortholog is 100%.
Bootstrap support for D3B163 as seed ortholog is 100%.

Group of orthologs #2554. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 P.pallidum:64

M3XHM0              	100.00%		D3B126              	100.00%
Bootstrap support for M3XHM0 as seed ortholog is 100%.
Bootstrap support for D3B126 as seed ortholog is 100%.

Group of orthologs #2555. Best score 63 bits
Score difference with first non-orthologous sequence - L.chalumnae:12 P.pallidum:63

H2ZTR1              	100.00%		D3BIG3              	100.00%
H3B998              	19.71%		
Bootstrap support for H2ZTR1 as seed ortholog is 65%.
Alternative seed ortholog is H3B8P3 (12 bits away from this cluster)
Bootstrap support for D3BIG3 as seed ortholog is 100%.

Group of orthologs #2556. Best score 63 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 P.pallidum:63

H3AWH6              	100.00%		D3BVN1              	100.00%
                    	       		D3BVN0              	45.09%
Bootstrap support for H3AWH6 as seed ortholog is 100%.
Bootstrap support for D3BVN1 as seed ortholog is 100%.

Group of orthologs #2557. Best score 63 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 P.pallidum:63

H3A814              	100.00%		D3BHA9              	100.00%
Bootstrap support for H3A814 as seed ortholog is 100%.
Bootstrap support for D3BHA9 as seed ortholog is 100%.

Group of orthologs #2558. Best score 63 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 P.pallidum:63

H3APQ3              	100.00%		D3BUN0              	100.00%
Bootstrap support for H3APQ3 as seed ortholog is 100%.
Bootstrap support for D3BUN0 as seed ortholog is 100%.

Group of orthologs #2559. Best score 63 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 P.pallidum:14

H3B045              	100.00%		D3BLB7              	100.00%
Bootstrap support for H3B045 as seed ortholog is 100%.
Bootstrap support for D3BLB7 as seed ortholog is 68%.
Alternative seed ortholog is D3B407 (14 bits away from this cluster)

Group of orthologs #2560. Best score 63 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 P.pallidum:63

H3B5P1              	100.00%		D3BH64              	100.00%
Bootstrap support for H3B5P1 as seed ortholog is 100%.
Bootstrap support for D3BH64 as seed ortholog is 100%.

Group of orthologs #2561. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.pallidum:62

H3AP02              	100.00%		D3BSU0              	100.00%
H3AVX0              	13.59%		D3BST9              	67.40%
                    	       		D3BEL6              	50.33%
                    	       		D3AY83              	39.39%
                    	       		D3B424              	36.98%
                    	       		D3AY82              	33.92%
                    	       		D3BQ76              	8.32%
Bootstrap support for H3AP02 as seed ortholog is 100%.
Bootstrap support for D3BSU0 as seed ortholog is 100%.

Group of orthologs #2562. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.pallidum:62

H3BAC4              	100.00%		D3AYF7              	100.00%
H2ZU19              	28.69%		D3BCK1              	19.11%
H3ADN6              	27.05%		D3B3Z6              	6.13%
H3BF61              	26.35%		
H3AT19              	22.13%		
Bootstrap support for H3BAC4 as seed ortholog is 100%.
Bootstrap support for D3AYF7 as seed ortholog is 100%.

Group of orthologs #2563. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.pallidum:62

H3AJ92              	100.00%		D3B7U8              	100.00%
H3AL20              	40.94%		
H2ZUR6              	25.91%		
H3BBE3              	9.78%		
Bootstrap support for H3AJ92 as seed ortholog is 100%.
Bootstrap support for D3B7U8 as seed ortholog is 100%.

Group of orthologs #2564. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.pallidum:62

H3A8N5              	100.00%		D3AY52              	100.00%
H2ZXN0              	76.77%		
Bootstrap support for H3A8N5 as seed ortholog is 100%.
Bootstrap support for D3AY52 as seed ortholog is 100%.

Group of orthologs #2565. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.pallidum:62

H3ADY2              	100.00%		D3BQ99              	100.00%
Bootstrap support for H3ADY2 as seed ortholog is 100%.
Bootstrap support for D3BQ99 as seed ortholog is 100%.

Group of orthologs #2566. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.pallidum:62

H3AN75              	100.00%		D3BHQ4              	100.00%
Bootstrap support for H3AN75 as seed ortholog is 100%.
Bootstrap support for D3BHQ4 as seed ortholog is 100%.

Group of orthologs #2567. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.pallidum:62

H3AY20              	100.00%		D3BL78              	100.00%
Bootstrap support for H3AY20 as seed ortholog is 100%.
Bootstrap support for D3BL78 as seed ortholog is 100%.

Group of orthologs #2568. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 P.pallidum:62

H3BD02              	100.00%		D3BTS8              	100.00%
Bootstrap support for H3BD02 as seed ortholog is 100%.
Bootstrap support for D3BTS8 as seed ortholog is 100%.

Group of orthologs #2569. Best score 61 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 P.pallidum:61

H3A215              	100.00%		D3BIR9              	100.00%
H3AZ37              	39.96%		
H3ACH4              	39.81%		
Bootstrap support for H3A215 as seed ortholog is 100%.
Bootstrap support for D3BIR9 as seed ortholog is 100%.

Group of orthologs #2570. Best score 61 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 P.pallidum:61

H3BED0              	100.00%		D3BBL7              	100.00%
H3AUG6              	15.11%		D3BPM3              	37.41%
Bootstrap support for H3BED0 as seed ortholog is 100%.
Bootstrap support for D3BBL7 as seed ortholog is 100%.

Group of orthologs #2571. Best score 61 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 P.pallidum:61

H2ZTJ3              	100.00%		D3B513              	100.00%
H2ZXC2              	7.42%		
Bootstrap support for H2ZTJ3 as seed ortholog is 100%.
Bootstrap support for D3B513 as seed ortholog is 100%.

Group of orthologs #2572. Best score 61 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 P.pallidum:61

H3AGP8              	100.00%		D3BAZ0              	100.00%
                    	       		D3BAY8              	41.84%
Bootstrap support for H3AGP8 as seed ortholog is 100%.
Bootstrap support for D3BAZ0 as seed ortholog is 100%.

Group of orthologs #2573. Best score 61 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 P.pallidum:61

H3B2X0              	100.00%		D3BUJ0              	100.00%
M3XIM0              	26.76%		
Bootstrap support for H3B2X0 as seed ortholog is 100%.
Bootstrap support for D3BUJ0 as seed ortholog is 100%.

Group of orthologs #2574. Best score 61 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 P.pallidum:61

H2ZYX9              	100.00%		D3BSX2              	100.00%
Bootstrap support for H2ZYX9 as seed ortholog is 100%.
Bootstrap support for D3BSX2 as seed ortholog is 100%.

Group of orthologs #2575. Best score 61 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 P.pallidum:61

H3AZ54              	100.00%		D3BJD5              	100.00%
Bootstrap support for H3AZ54 as seed ortholog is 100%.
Bootstrap support for D3BJD5 as seed ortholog is 100%.

Group of orthologs #2576. Best score 60 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 P.pallidum:60

H2ZU09              	100.00%		D3BPB6              	100.00%
H3AY56              	100.00%		D3B3F0              	100.00%
H3A235              	91.33%		D3BG54              	40.93%
H3AF27              	87.59%		D3B460              	16.48%
H2ZXQ8              	87.13%		D3B8S2              	15.00%
H3A288              	85.48%		D3B8W1              	14.44%
H3A026              	81.73%		D3B941              	13.52%
H3A5Q4              	81.50%		D3B368              	12.78%
H3A2K2              	80.46%		D3B2G0              	12.78%
H3A811              	80.09%		D3B6U3              	12.41%
H2ZU54              	79.77%		D3B8T1              	12.41%
H3A110              	78.92%		D3B369              	12.04%
H2ZUI3              	78.69%		D3BHZ0              	11.85%
H3A1I9              	78.69%		D3BDS2              	11.67%
H2ZY97              	78.69%		D3BLC3              	11.30%
H2ZZU7              	78.39%		D3B8V6              	10.93%
H3A0W4              	77.52%		D3BHZ2              	9.63%
H2ZY43              	75.64%		D3B5L2              	8.89%
H2ZUV1              	75.64%		D3BHR7              	7.96%
H3A2I1              	73.77%		D3BLQ1              	6.48%
H2ZW87              	72.37%		D3BRG4              	5.56%
H3ADX9              	66.67%		
H3A2R6              	65.81%		
H2ZUE2              	64.17%		
H3A1F8              	64.17%		
H3B5P2              	63.93%		
H3A2N6              	63.23%		
H3A7N8              	63.00%		
H2ZTR9              	62.30%		
H2ZX02              	61.36%		
H3AYW7              	61.36%		
H3A5L9              	61.15%		
H3B716              	58.31%		
H3B3P1              	52.46%		
H3B503              	51.05%		
H2ZTA6              	48.24%		
H3AGV3              	42.39%		
H2ZV94              	41.61%		
H3A3U9              	34.89%		
H2ZSV3              	23.19%		
H3B2C7              	23.19%		
H2ZVD3              	20.61%		
H3B0C8              	20.14%		
H3A6I5              	18.74%		
H3AW60              	13.82%		
H3B9H9              	13.35%		
H3APA9              	11.94%		
H3ATX0              	10.77%		
H2ZRN1              	9.84%		
H3ATA5              	9.37%		
H2ZRR6              	8.43%		
H3AVA1              	7.26%		
H3B8D8              	7.03%		
H3AUH9              	6.32%		
H2ZWA9              	5.15%		
H3B8P5              	5.15%		
Bootstrap support for H2ZU09 as seed ortholog is 100%.
Bootstrap support for H3AY56 as seed ortholog is 100%.
Bootstrap support for D3BPB6 as seed ortholog is 100%.
Bootstrap support for D3B3F0 as seed ortholog is 100%.

Group of orthologs #2577. Best score 60 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 P.pallidum:60

H3BHV4              	100.00%		D3BM93              	100.00%
H2ZX74              	100.00%		D3BUC6              	100.00%
H3BHZ5              	67.71%		D3BU13              	21.63%
H3B255              	39.51%		D3BVK3              	20.53%
H2ZVN3              	38.99%		D3B0H7              	19.10%
H3B9V4              	38.21%		D3BR87              	13.96%
H3AZ03              	38.12%		D3AYT6              	10.98%
H3BEE0              	37.34%		
H3B2R1              	27.85%		
H3ATE6              	23.85%		
H2ZZD7              	8.18%		
Bootstrap support for H3BHV4 as seed ortholog is 100%.
Bootstrap support for H2ZX74 as seed ortholog is 100%.
Bootstrap support for D3BM93 as seed ortholog is 100%.
Bootstrap support for D3BUC6 as seed ortholog is 100%.

Group of orthologs #2578. Best score 60 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 P.pallidum:60

H3A0T1              	100.00%		D3BAM7              	100.00%
Bootstrap support for H3A0T1 as seed ortholog is 100%.
Bootstrap support for D3BAM7 as seed ortholog is 100%.

Group of orthologs #2579. Best score 60 bits
Score difference with first non-orthologous sequence - L.chalumnae:9 P.pallidum:60

H3A934              	100.00%		D3B3Z9              	100.00%
Bootstrap support for H3A934 as seed ortholog is 69%.
Alternative seed ortholog is H3AAS6 (9 bits away from this cluster)
Bootstrap support for D3B3Z9 as seed ortholog is 100%.

Group of orthologs #2580. Best score 60 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 P.pallidum:60

H3A8G2              	100.00%		D3B8K7              	100.00%
Bootstrap support for H3A8G2 as seed ortholog is 100%.
Bootstrap support for D3B8K7 as seed ortholog is 100%.

Group of orthologs #2581. Best score 60 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 P.pallidum:60

H3AGN9              	100.00%		D3BF56              	100.00%
Bootstrap support for H3AGN9 as seed ortholog is 100%.
Bootstrap support for D3BF56 as seed ortholog is 100%.

Group of orthologs #2582. Best score 60 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 P.pallidum:60

H3AV79              	100.00%		D3B6S3              	100.00%
Bootstrap support for H3AV79 as seed ortholog is 100%.
Bootstrap support for D3B6S3 as seed ortholog is 100%.

Group of orthologs #2583. Best score 60 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 P.pallidum:60

H3B875              	100.00%		D3B2B2              	100.00%
Bootstrap support for H3B875 as seed ortholog is 100%.
Bootstrap support for D3B2B2 as seed ortholog is 100%.

Group of orthologs #2584. Best score 59 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 P.pallidum:59

H3ARY8              	100.00%		D3B4M2              	100.00%
H3ARG7              	14.35%		
H3B3A8              	12.11%		
H2ZT08              	11.21%		
H3A0V2              	6.73%		
Bootstrap support for H3ARY8 as seed ortholog is 100%.
Bootstrap support for D3B4M2 as seed ortholog is 100%.

Group of orthologs #2585. Best score 59 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 P.pallidum:59

H3B9Z0              	100.00%		D3AVT4              	100.00%
H3AHA3              	35.23%		
H3B8U0              	31.25%		
Bootstrap support for H3B9Z0 as seed ortholog is 100%.
Bootstrap support for D3AVT4 as seed ortholog is 100%.

Group of orthologs #2586. Best score 59 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 P.pallidum:59

H3A164              	100.00%		D3BKU2              	100.00%
H3B7G2              	39.14%		
Bootstrap support for H3A164 as seed ortholog is 100%.
Bootstrap support for D3BKU2 as seed ortholog is 100%.

Group of orthologs #2587. Best score 59 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 P.pallidum:59

H3AM73              	100.00%		D3BVR4              	100.00%
H2ZSD7              	32.70%		
Bootstrap support for H3AM73 as seed ortholog is 100%.
Bootstrap support for D3BVR4 as seed ortholog is 100%.

Group of orthologs #2588. Best score 59 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 P.pallidum:59

H3BFQ9              	100.00%		D3BPP8              	100.00%
                    	       		D3B1I1              	5.02%
Bootstrap support for H3BFQ9 as seed ortholog is 100%.
Bootstrap support for D3BPP8 as seed ortholog is 100%.

Group of orthologs #2589. Best score 59 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 P.pallidum:59

H2ZRY0              	100.00%		D3BEB8              	100.00%
Bootstrap support for H2ZRY0 as seed ortholog is 100%.
Bootstrap support for D3BEB8 as seed ortholog is 100%.

Group of orthologs #2590. Best score 59 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 P.pallidum:59

H3A3B5              	100.00%		D3BHP1              	100.00%
Bootstrap support for H3A3B5 as seed ortholog is 100%.
Bootstrap support for D3BHP1 as seed ortholog is 100%.

Group of orthologs #2591. Best score 59 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 P.pallidum:59

H3A4Z9              	100.00%		D3BH54              	100.00%
Bootstrap support for H3A4Z9 as seed ortholog is 100%.
Bootstrap support for D3BH54 as seed ortholog is 100%.

Group of orthologs #2592. Best score 59 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 P.pallidum:59

H3BH93              	100.00%		D3AZW3              	100.00%
Bootstrap support for H3BH93 as seed ortholog is 100%.
Bootstrap support for D3AZW3 as seed ortholog is 100%.

Group of orthologs #2593. Best score 58 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 P.pallidum:58

H3A680              	100.00%		D3B2Y3              	100.00%
Bootstrap support for H3A680 as seed ortholog is 100%.
Bootstrap support for D3B2Y3 as seed ortholog is 100%.

Group of orthologs #2594. Best score 58 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 P.pallidum:58

H3A9U6              	100.00%		D3BBI5              	100.00%
Bootstrap support for H3A9U6 as seed ortholog is 100%.
Bootstrap support for D3BBI5 as seed ortholog is 100%.

Group of orthologs #2595. Best score 58 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 P.pallidum:58

H3BHF7              	100.00%		D3B9D4              	100.00%
Bootstrap support for H3BHF7 as seed ortholog is 100%.
Bootstrap support for D3B9D4 as seed ortholog is 100%.

Group of orthologs #2596. Best score 58 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 P.pallidum:58

M3XJP2              	100.00%		D3BSI8              	100.00%
Bootstrap support for M3XJP2 as seed ortholog is 100%.
Bootstrap support for D3BSI8 as seed ortholog is 100%.

Group of orthologs #2597. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.pallidum:57

H3BCG4              	100.00%		D3B2V1              	100.00%
H3A3L9              	48.18%		
H3B753              	43.18%		
Bootstrap support for H3BCG4 as seed ortholog is 100%.
Bootstrap support for D3B2V1 as seed ortholog is 100%.

Group of orthologs #2598. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.pallidum:57

H3BF47              	100.00%		D3BJI3              	100.00%
H3BH27              	100.00%		
Bootstrap support for H3BF47 as seed ortholog is 100%.
Bootstrap support for H3BH27 as seed ortholog is 100%.
Bootstrap support for D3BJI3 as seed ortholog is 100%.

Group of orthologs #2599. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.pallidum:57

M3XH57              	100.00%		D3BC36              	100.00%
Bootstrap support for M3XH57 as seed ortholog is 100%.
Bootstrap support for D3BC36 as seed ortholog is 100%.

Group of orthologs #2600. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.pallidum:57

H3BHL6              	100.00%		D3BEA7              	100.00%
Bootstrap support for H3BHL6 as seed ortholog is 100%.
Bootstrap support for D3BEA7 as seed ortholog is 100%.

Group of orthologs #2601. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 P.pallidum:57

H3BDH2              	100.00%		D3BPP1              	100.00%
Bootstrap support for H3BDH2 as seed ortholog is 100%.
Bootstrap support for D3BPP1 as seed ortholog is 100%.

Group of orthologs #2602. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 P.pallidum:56

H3A0A3              	54.04%		D3BI86              	100.00%
H3B4C7              	100.00%		D3BRM6              	100.00%
H3AHJ2              	10.91%		D3BI87              	48.64%
H2ZXV3              	9.96%		D3B978              	46.08%
H3A719              	9.75%		D3B620              	45.35%
H3A344              	9.45%		D3BAZ6              	25.64%
H2ZW88              	8.65%		D3B553              	25.35%
H3AMY1              	7.85%		D3BL16              	23.00%
                    	       		D3AYY3              	18.39%
Bootstrap support for H3B4C7 as seed ortholog is 100%.
Bootstrap support for D3BI86 as seed ortholog is 100%.
Bootstrap support for D3BRM6 as seed ortholog is 100%.

Group of orthologs #2603. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 P.pallidum:56

H3B1G4              	100.00%		D3BCP6              	100.00%
                    	       		D3BCW5              	87.50%
                    	       		D3BDW5              	55.58%
                    	       		D3BDV5              	51.12%
                    	       		D3B0Z2              	43.08%
                    	       		D3BNK4              	24.11%
                    	       		D3BJJ7              	23.88%
                    	       		D3AZQ3              	23.21%
                    	       		D3BQ17              	12.28%
Bootstrap support for H3B1G4 as seed ortholog is 100%.
Bootstrap support for D3BCP6 as seed ortholog is 100%.

Group of orthologs #2604. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 P.pallidum:56

H3AZY5              	100.00%		D3BGD7              	100.00%
H3APE3              	9.45%		
Bootstrap support for H3AZY5 as seed ortholog is 100%.
Bootstrap support for D3BGD7 as seed ortholog is 100%.

Group of orthologs #2605. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 P.pallidum:56

H2ZSA2              	100.00%		D3BAQ0              	100.00%
Bootstrap support for H2ZSA2 as seed ortholog is 100%.
Bootstrap support for D3BAQ0 as seed ortholog is 100%.

Group of orthologs #2606. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 P.pallidum:56

H3AA04              	100.00%		D3BIF7              	100.00%
Bootstrap support for H3AA04 as seed ortholog is 100%.
Bootstrap support for D3BIF7 as seed ortholog is 100%.

Group of orthologs #2607. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 P.pallidum:56

H3AII8              	100.00%		D3BKM0              	100.00%
Bootstrap support for H3AII8 as seed ortholog is 100%.
Bootstrap support for D3BKM0 as seed ortholog is 100%.

Group of orthologs #2608. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 P.pallidum:56

H3B4Q4              	100.00%		D3BD78              	100.00%
Bootstrap support for H3B4Q4 as seed ortholog is 100%.
Bootstrap support for D3BD78 as seed ortholog is 100%.

Group of orthologs #2609. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 P.pallidum:56

H3B7Q8              	100.00%		D3BHH9              	100.00%
Bootstrap support for H3B7Q8 as seed ortholog is 100%.
Bootstrap support for D3BHH9 as seed ortholog is 100%.

Group of orthologs #2610. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 P.pallidum:56

H3BAK9              	100.00%		D3BFH0              	100.00%
Bootstrap support for H3BAK9 as seed ortholog is 100%.
Bootstrap support for D3BFH0 as seed ortholog is 100%.

Group of orthologs #2611. Best score 55 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 P.pallidum:55

H2ZRL2              	100.00%		D3BJY0              	100.00%
                    	       		D3BRA6              	31.60%
Bootstrap support for H2ZRL2 as seed ortholog is 100%.
Bootstrap support for D3BJY0 as seed ortholog is 100%.

Group of orthologs #2612. Best score 55 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 P.pallidum:55

H3B9A7              	100.00%		D3BME2              	100.00%
H3AM45              	60.49%		
Bootstrap support for H3B9A7 as seed ortholog is 100%.
Bootstrap support for D3BME2 as seed ortholog is 100%.

Group of orthologs #2613. Best score 55 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 P.pallidum:55

H2ZS59              	100.00%		D3B0G1              	100.00%
Bootstrap support for H2ZS59 as seed ortholog is 100%.
Bootstrap support for D3B0G1 as seed ortholog is 100%.

Group of orthologs #2614. Best score 55 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 P.pallidum:55

H3A4J3              	100.00%		D3BEQ2              	100.00%
Bootstrap support for H3A4J3 as seed ortholog is 100%.
Bootstrap support for D3BEQ2 as seed ortholog is 100%.

Group of orthologs #2615. Best score 55 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 P.pallidum:55

H3AHI8              	100.00%		D3BAQ6              	100.00%
Bootstrap support for H3AHI8 as seed ortholog is 100%.
Bootstrap support for D3BAQ6 as seed ortholog is 100%.

Group of orthologs #2616. Best score 55 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 P.pallidum:55

H3AML1              	100.00%		D3B7L3              	100.00%
Bootstrap support for H3AML1 as seed ortholog is 100%.
Bootstrap support for D3B7L3 as seed ortholog is 100%.

Group of orthologs #2617. Best score 55 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 P.pallidum:55

H3AY91              	100.00%		D3BGB3              	100.00%
Bootstrap support for H3AY91 as seed ortholog is 100%.
Bootstrap support for D3BGB3 as seed ortholog is 100%.

Group of orthologs #2618. Best score 55 bits
Score difference with first non-orthologous sequence - L.chalumnae:5 P.pallidum:55

H3BB18              	100.00%		D3BF08              	100.00%
Bootstrap support for H3BB18 as seed ortholog is 60%.
Alternative seed ortholog is H3B041 (5 bits away from this cluster)
Bootstrap support for D3BF08 as seed ortholog is 100%.

Group of orthologs #2619. Best score 54 bits
Score difference with first non-orthologous sequence - L.chalumnae:5 P.pallidum:54

H2ZS60              	100.00%		D3BAA5              	100.00%
H3AXQ0              	28.53%		
H3A799              	12.00%		
Bootstrap support for H2ZS60 as seed ortholog is 56%.
Alternative seed ortholog is H3AF53 (5 bits away from this cluster)
Bootstrap support for D3BAA5 as seed ortholog is 100%.

Group of orthologs #2620. Best score 54 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.pallidum:54

H3AW37              	100.00%		D3B139              	100.00%
H3AKD7              	10.12%		
M3XIK8              	9.26%		
Bootstrap support for H3AW37 as seed ortholog is 100%.
Bootstrap support for D3B139 as seed ortholog is 100%.

Group of orthologs #2621. Best score 54 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.pallidum:54

H2ZZH9              	100.00%		D3AWB6              	100.00%
H3APU0              	30.33%		
Bootstrap support for H2ZZH9 as seed ortholog is 100%.
Bootstrap support for D3AWB6 as seed ortholog is 100%.

Group of orthologs #2622. Best score 54 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.pallidum:54

H3AJZ2              	100.00%		D3BDZ5              	100.00%
H3B2P0              	59.86%		
Bootstrap support for H3AJZ2 as seed ortholog is 100%.
Bootstrap support for D3BDZ5 as seed ortholog is 100%.

Group of orthologs #2623. Best score 54 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.pallidum:54

H3AG79              	100.00%		D3AVJ5              	100.00%
Bootstrap support for H3AG79 as seed ortholog is 100%.
Bootstrap support for D3AVJ5 as seed ortholog is 100%.

Group of orthologs #2624. Best score 54 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.pallidum:54

H3AAG9              	100.00%		D3B4P5              	100.00%
Bootstrap support for H3AAG9 as seed ortholog is 100%.
Bootstrap support for D3B4P5 as seed ortholog is 100%.

Group of orthologs #2625. Best score 54 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.pallidum:54

H3A479              	100.00%		D3BII5              	100.00%
Bootstrap support for H3A479 as seed ortholog is 100%.
Bootstrap support for D3BII5 as seed ortholog is 100%.

Group of orthologs #2626. Best score 54 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 P.pallidum:54

H3AQC6              	100.00%		D3BTN8              	100.00%
Bootstrap support for H3AQC6 as seed ortholog is 100%.
Bootstrap support for D3BTN8 as seed ortholog is 100%.

Group of orthologs #2627. Best score 53 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 P.pallidum:53

H3B0U6              	100.00%		D3BQH2              	100.00%
H3B4J1              	10.32%		
H3AKJ5              	8.71%		
H3B0U0              	7.26%		
H3APX8              	6.85%		
H3AK18              	6.77%		
H3BER1              	6.69%		
H2ZTK6              	6.53%		
H3BAV4              	6.45%		
H3AKF7              	6.29%		
H3AFA8              	5.73%		
H3A3N8              	5.73%		
H3AB16              	5.65%		
H3AL40              	5.65%		
H3AC66              	5.48%		
H3AUR5              	5.48%		
H3AYE4              	5.32%		
H3ATI6              	5.24%		
H3BE68              	5.16%		
H3AJW4              	5.00%		
Bootstrap support for H3B0U6 as seed ortholog is 100%.
Bootstrap support for D3BQH2 as seed ortholog is 100%.

Group of orthologs #2628. Best score 53 bits
Score difference with first non-orthologous sequence - L.chalumnae:1 P.pallidum:53

H3AW16              	100.00%		D3AYL1              	100.00%
H3B3B7              	60.65%		
H3A5W0              	58.32%		
H3AX31              	24.11%		
H3ATW3              	21.46%		
Bootstrap support for H3AW16 as seed ortholog is 40%.
Alternative seed ortholog is H3B3Q3 (1 bits away from this cluster)
Bootstrap support for D3AYL1 as seed ortholog is 100%.

Group of orthologs #2629. Best score 53 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 P.pallidum:53

H3A598              	100.00%		D3B0A5              	100.00%
Bootstrap support for H3A598 as seed ortholog is 100%.
Bootstrap support for D3B0A5 as seed ortholog is 100%.

Group of orthologs #2630. Best score 53 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 P.pallidum:53

H3B374              	100.00%		D3B712              	100.00%
Bootstrap support for H3B374 as seed ortholog is 100%.
Bootstrap support for D3B712 as seed ortholog is 100%.

Group of orthologs #2631. Best score 53 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 P.pallidum:53

H3AMN9              	100.00%		D3BV65              	100.00%
Bootstrap support for H3AMN9 as seed ortholog is 100%.
Bootstrap support for D3BV65 as seed ortholog is 100%.

Group of orthologs #2632. Best score 53 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 P.pallidum:53

M3XJY0              	100.00%		D3BJA4              	100.00%
Bootstrap support for M3XJY0 as seed ortholog is 100%.
Bootstrap support for D3BJA4 as seed ortholog is 100%.

Group of orthologs #2633. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 P.pallidum:52

H3B5U4              	100.00%		D3BCC4              	100.00%
H3A1C5              	56.24%		D3BCC5              	8.93%
H3AKG8              	35.27%		D3BM69              	6.53%
H2ZZM8              	17.20%		D3BA70              	5.20%
H3B3C3              	16.99%		
H3ABC0              	9.57%		
Bootstrap support for H3B5U4 as seed ortholog is 100%.
Bootstrap support for D3BCC4 as seed ortholog is 100%.

Group of orthologs #2634. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 P.pallidum:52

H3APM5              	100.00%		D3BMZ4              	100.00%
H3BFW3              	61.00%		D3BFM6              	34.84%
H3AHL2              	56.76%		D3AYE9              	10.48%
H3A546              	8.49%		
H3A642              	5.98%		
Bootstrap support for H3APM5 as seed ortholog is 100%.
Bootstrap support for D3BMZ4 as seed ortholog is 100%.

Group of orthologs #2635. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:1 P.pallidum:52

H3BA26              	100.00%		D3BI39              	100.00%
H3AIV4              	41.53%		
H3BCJ2              	37.64%		
H3B4K9              	30.74%		
H3BAF6              	7.78%		
Bootstrap support for H3BA26 as seed ortholog is 55%.
Alternative seed ortholog is H3ANJ5 (1 bits away from this cluster)
Bootstrap support for D3BI39 as seed ortholog is 100%.

Group of orthologs #2636. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 P.pallidum:52

H3AWP1              	100.00%		D3B5P8              	100.00%
H3AAN8              	76.97%		
H3B7A2              	66.17%		
Bootstrap support for H3AWP1 as seed ortholog is 100%.
Bootstrap support for D3B5P8 as seed ortholog is 100%.

Group of orthologs #2637. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:5 P.pallidum:52

H3B2C5              	100.00%		D3BKN9              	100.00%
H3ARE6              	60.17%		
H3B1R7              	44.92%		
Bootstrap support for H3B2C5 as seed ortholog is 57%.
Alternative seed ortholog is H3B900 (5 bits away from this cluster)
Bootstrap support for D3BKN9 as seed ortholog is 100%.

Group of orthologs #2638. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 P.pallidum:52

H2ZZ39              	100.00%		D3AYC1              	100.00%
Bootstrap support for H2ZZ39 as seed ortholog is 100%.
Bootstrap support for D3AYC1 as seed ortholog is 100%.

Group of orthologs #2639. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 P.pallidum:52

H3AJ47              	100.00%		D3B5W4              	100.00%
Bootstrap support for H3AJ47 as seed ortholog is 100%.
Bootstrap support for D3B5W4 as seed ortholog is 100%.

Group of orthologs #2640. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 P.pallidum:52

H3AA68              	100.00%		D3BEI4              	100.00%
Bootstrap support for H3AA68 as seed ortholog is 100%.
Bootstrap support for D3BEI4 as seed ortholog is 100%.

Group of orthologs #2641. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 P.pallidum:52

H3AFF3              	100.00%		D3BQJ6              	100.00%
Bootstrap support for H3AFF3 as seed ortholog is 100%.
Bootstrap support for D3BQJ6 as seed ortholog is 100%.

Group of orthologs #2642. Best score 51 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 P.pallidum:51

H3A0R2              	100.00%		D3BKB7              	100.00%
H3A373              	56.86%		
H3ATH2              	43.40%		
H3AX56              	31.07%		
H3B492              	8.43%		
Bootstrap support for H3A0R2 as seed ortholog is 100%.
Bootstrap support for D3BKB7 as seed ortholog is 100%.

Group of orthologs #2643. Best score 51 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 P.pallidum:51

H3ACN2              	100.00%		D3AXI7              	100.00%
Bootstrap support for H3ACN2 as seed ortholog is 100%.
Bootstrap support for D3AXI7 as seed ortholog is 100%.

Group of orthologs #2644. Best score 51 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 P.pallidum:6

H3AIQ2              	100.00%		D3B148              	100.00%
Bootstrap support for H3AIQ2 as seed ortholog is 100%.
Bootstrap support for D3B148 as seed ortholog is 62%.
Alternative seed ortholog is D3B7Q4 (6 bits away from this cluster)

Group of orthologs #2645. Best score 51 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 P.pallidum:51

H3AQV8              	100.00%		D3BHE1              	100.00%
Bootstrap support for H3AQV8 as seed ortholog is 100%.
Bootstrap support for D3BHE1 as seed ortholog is 100%.

Group of orthologs #2646. Best score 51 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 P.pallidum:51

H3B309              	100.00%		D3BB28              	100.00%
Bootstrap support for H3B309 as seed ortholog is 100%.
Bootstrap support for D3BB28 as seed ortholog is 100%.

Group of orthologs #2647. Best score 51 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 P.pallidum:51

H3BEU6              	100.00%		D3BAI6              	100.00%
Bootstrap support for H3BEU6 as seed ortholog is 100%.
Bootstrap support for D3BAI6 as seed ortholog is 100%.

Group of orthologs #2648. Best score 51 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 P.pallidum:51

M3XJA9              	100.00%		D3BNR6              	100.00%
Bootstrap support for M3XJA9 as seed ortholog is 100%.
Bootstrap support for D3BNR6 as seed ortholog is 100%.

Group of orthologs #2649. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.pallidum:50

H3AQ50              	100.00%		D3B5F0              	100.00%
H3AC90              	18.73%		D3BH04              	10.05%
H3AMY7              	12.38%		
H2ZVV4              	5.37%		
Bootstrap support for H3AQ50 as seed ortholog is 100%.
Bootstrap support for D3B5F0 as seed ortholog is 100%.

Group of orthologs #2650. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.pallidum:50

H3ADZ2              	100.00%		D3BMJ6              	100.00%
H3AI17              	25.13%		D3BMJ7              	58.93%
Bootstrap support for H3ADZ2 as seed ortholog is 100%.
Bootstrap support for D3BMJ6 as seed ortholog is 100%.

Group of orthologs #2651. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.pallidum:50

H3ABP1              	100.00%		D3BSD5              	100.00%
H3APG3              	27.10%		
H3AZ14              	5.39%		
Bootstrap support for H3ABP1 as seed ortholog is 100%.
Bootstrap support for D3BSD5 as seed ortholog is 100%.

Group of orthologs #2652. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.pallidum:50

H3A6P0              	100.00%		D3BUE2              	100.00%
Bootstrap support for H3A6P0 as seed ortholog is 100%.
Bootstrap support for D3BUE2 as seed ortholog is 100%.

Group of orthologs #2653. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.pallidum:50

H3B0P6              	100.00%		D3B7P4              	100.00%
Bootstrap support for H3B0P6 as seed ortholog is 100%.
Bootstrap support for D3B7P4 as seed ortholog is 100%.

Group of orthologs #2654. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.pallidum:50

H3AHP3              	100.00%		D3BTM4              	100.00%
Bootstrap support for H3AHP3 as seed ortholog is 100%.
Bootstrap support for D3BTM4 as seed ortholog is 100%.

Group of orthologs #2655. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 P.pallidum:50

H3BG15              	100.00%		D3BL89              	100.00%
Bootstrap support for H3BG15 as seed ortholog is 100%.
Bootstrap support for D3BL89 as seed ortholog is 100%.

Group of orthologs #2656. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.pallidum:49

H2ZYD4              	100.00%		D3B808              	100.00%
H3A5I9              	25.00%		
H3B0Y5              	9.18%		
Bootstrap support for H2ZYD4 as seed ortholog is 100%.
Bootstrap support for D3B808 as seed ortholog is 100%.

Group of orthologs #2657. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.pallidum:49

H3AH97              	100.00%		D3BE73              	100.00%
                    	       		D3BBK9              	6.64%
                    	       		D3AW66              	5.37%
Bootstrap support for H3AH97 as seed ortholog is 100%.
Bootstrap support for D3BE73 as seed ortholog is 100%.

Group of orthologs #2658. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.pallidum:49

H2ZSY7              	100.00%		D3AYM4              	100.00%
Bootstrap support for H2ZSY7 as seed ortholog is 100%.
Bootstrap support for D3AYM4 as seed ortholog is 100%.

Group of orthologs #2659. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.pallidum:49

H3A3V3              	100.00%		D3B9U2              	100.00%
Bootstrap support for H3A3V3 as seed ortholog is 100%.
Bootstrap support for D3B9U2 as seed ortholog is 100%.

Group of orthologs #2660. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.pallidum:49

H3A0U6              	100.00%		D3BR66              	100.00%
Bootstrap support for H3A0U6 as seed ortholog is 100%.
Bootstrap support for D3BR66 as seed ortholog is 100%.

Group of orthologs #2661. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.pallidum:49

H3AC44              	100.00%		D3BLH0              	100.00%
Bootstrap support for H3AC44 as seed ortholog is 100%.
Bootstrap support for D3BLH0 as seed ortholog is 100%.

Group of orthologs #2662. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.pallidum:49

H3AWC1              	100.00%		D3BE31              	100.00%
Bootstrap support for H3AWC1 as seed ortholog is 100%.
Bootstrap support for D3BE31 as seed ortholog is 100%.

Group of orthologs #2663. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.pallidum:49

H3B6W0              	100.00%		D3BJL0              	100.00%
Bootstrap support for H3B6W0 as seed ortholog is 100%.
Bootstrap support for D3BJL0 as seed ortholog is 100%.

Group of orthologs #2664. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 P.pallidum:49

H3B829              	100.00%		D3BSV6              	100.00%
Bootstrap support for H3B829 as seed ortholog is 100%.
Bootstrap support for D3BSV6 as seed ortholog is 100%.

Group of orthologs #2665. Best score 48 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 P.pallidum:48

H3AUW5              	100.00%		D3BEA9              	100.00%
Bootstrap support for H3AUW5 as seed ortholog is 100%.
Bootstrap support for D3BEA9 as seed ortholog is 100%.

Group of orthologs #2666. Best score 47 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 P.pallidum:47

H3A0T2              	100.00%		D3BJN1              	100.00%
H3AXG2              	36.76%		D3BV06              	68.53%
H3A682              	30.59%		D3BT17              	67.49%
H3AKT5              	28.42%		
H3A290              	21.40%		
Bootstrap support for H3A0T2 as seed ortholog is 100%.
Bootstrap support for D3BJN1 as seed ortholog is 100%.

Group of orthologs #2667. Best score 47 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 P.pallidum:47

H3AF40              	100.00%		D3B666              	100.00%
H3A1Y2              	63.10%		
Bootstrap support for H3AF40 as seed ortholog is 100%.
Bootstrap support for D3B666 as seed ortholog is 100%.

Group of orthologs #2668. Best score 47 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 P.pallidum:47

H3AE63              	100.00%		D3B845              	100.00%
Bootstrap support for H3AE63 as seed ortholog is 100%.
Bootstrap support for D3B845 as seed ortholog is 100%.

Group of orthologs #2669. Best score 47 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 P.pallidum:47

H3B5V8              	100.00%		D3B385              	100.00%
Bootstrap support for H3B5V8 as seed ortholog is 100%.
Bootstrap support for D3B385 as seed ortholog is 100%.

Group of orthologs #2670. Best score 47 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 P.pallidum:47

H3ARZ6              	100.00%		D3BNQ6              	100.00%
Bootstrap support for H3ARZ6 as seed ortholog is 100%.
Bootstrap support for D3BNQ6 as seed ortholog is 100%.

Group of orthologs #2671. Best score 47 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 P.pallidum:47

H3AVC4              	100.00%		D3BL14              	100.00%
Bootstrap support for H3AVC4 as seed ortholog is 100%.
Bootstrap support for D3BL14 as seed ortholog is 100%.

Group of orthologs #2672. Best score 47 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 P.pallidum:47

H3BAV5              	100.00%		D3BJK6              	100.00%
Bootstrap support for H3BAV5 as seed ortholog is 100%.
Bootstrap support for D3BJK6 as seed ortholog is 100%.

Group of orthologs #2673. Best score 46 bits
Score difference with first non-orthologous sequence - L.chalumnae:46 P.pallidum:46

H2ZZV0              	100.00%		D3B775              	100.00%
Bootstrap support for H2ZZV0 as seed ortholog is 100%.
Bootstrap support for D3B775 as seed ortholog is 100%.

Group of orthologs #2674. Best score 46 bits
Score difference with first non-orthologous sequence - L.chalumnae:46 P.pallidum:46

H3AHH1              	100.00%		D3B1N1              	100.00%
Bootstrap support for H3AHH1 as seed ortholog is 100%.
Bootstrap support for D3B1N1 as seed ortholog is 100%.

Group of orthologs #2675. Best score 46 bits
Score difference with first non-orthologous sequence - L.chalumnae:46 P.pallidum:46

H2ZZD8              	100.00%		D3BKA6              	100.00%
Bootstrap support for H2ZZD8 as seed ortholog is 100%.
Bootstrap support for D3BKA6 as seed ortholog is 100%.

Group of orthologs #2676. Best score 45 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.pallidum:45

H3AIL5              	100.00%		D3BDD7              	100.00%
H2ZYH2              	55.15%		D3BDE0              	93.02%
H2ZZH0              	44.85%		
Bootstrap support for H3AIL5 as seed ortholog is 100%.
Bootstrap support for D3BDD7 as seed ortholog is 100%.

Group of orthologs #2677. Best score 45 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.pallidum:45

H2ZU81              	100.00%		D3BGG1              	100.00%
H3AIP3              	84.90%		D3BR20              	52.00%
Bootstrap support for H2ZU81 as seed ortholog is 100%.
Bootstrap support for D3BGG1 as seed ortholog is 100%.

Group of orthologs #2678. Best score 45 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.pallidum:45

H3B2V8              	100.00%		D3BIA5              	100.00%
H3B031              	52.11%		
H3A9Z8              	45.61%		
Bootstrap support for H3B2V8 as seed ortholog is 100%.
Bootstrap support for D3BIA5 as seed ortholog is 100%.

Group of orthologs #2679. Best score 45 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.pallidum:45

H3AUR3              	100.00%		D3B641              	100.00%
Bootstrap support for H3AUR3 as seed ortholog is 100%.
Bootstrap support for D3B641 as seed ortholog is 100%.

Group of orthologs #2680. Best score 45 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.pallidum:45

H3AI45              	100.00%		D3BNY0              	100.00%
Bootstrap support for H3AI45 as seed ortholog is 100%.
Bootstrap support for D3BNY0 as seed ortholog is 100%.

Group of orthologs #2681. Best score 45 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.pallidum:45

H3AQF4              	100.00%		D3BJ18              	100.00%
Bootstrap support for H3AQF4 as seed ortholog is 100%.
Bootstrap support for D3BJ18 as seed ortholog is 100%.

Group of orthologs #2682. Best score 45 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.pallidum:45

H3BAE4              	100.00%		D3BDV3              	100.00%
Bootstrap support for H3BAE4 as seed ortholog is 100%.
Bootstrap support for D3BDV3 as seed ortholog is 100%.

Group of orthologs #2683. Best score 45 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 P.pallidum:45

H3B6B0              	100.00%		D3BHP0              	100.00%
Bootstrap support for H3B6B0 as seed ortholog is 100%.
Bootstrap support for D3BHP0 as seed ortholog is 100%.

Group of orthologs #2684. Best score 44 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 P.pallidum:44

H3AQH7              	100.00%		D3B012              	100.00%
H3B8Z6              	73.44%		
H3B0V2              	53.65%		
H3AM27              	37.50%		
Bootstrap support for H3AQH7 as seed ortholog is 100%.
Bootstrap support for D3B012 as seed ortholog is 100%.

Group of orthologs #2685. Best score 44 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 P.pallidum:44

H3AMR5              	100.00%		D3B7L6              	100.00%
H3AA70              	25.55%		D3BVM3              	39.47%
Bootstrap support for H3AMR5 as seed ortholog is 100%.
Bootstrap support for D3B7L6 as seed ortholog is 100%.

Group of orthologs #2686. Best score 44 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 P.pallidum:44

M3XJJ6              	100.00%		D3AWE2              	100.00%
Bootstrap support for M3XJJ6 as seed ortholog is 100%.
Bootstrap support for D3AWE2 as seed ortholog is 100%.

Group of orthologs #2687. Best score 44 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 P.pallidum:44

M3XJ22              	100.00%		D3BD68              	100.00%
Bootstrap support for M3XJ22 as seed ortholog is 100%.
Bootstrap support for D3BD68 as seed ortholog is 100%.

Group of orthologs #2688. Best score 43 bits
Score difference with first non-orthologous sequence - L.chalumnae:43 P.pallidum:43

H3AK17              	100.00%		D3AZE3              	100.00%
                    	       		D3AZ54              	81.25%
Bootstrap support for H3AK17 as seed ortholog is 100%.
Bootstrap support for D3AZE3 as seed ortholog is 100%.

Group of orthologs #2689. Best score 43 bits
Score difference with first non-orthologous sequence - L.chalumnae:43 P.pallidum:43

H3AMP6              	100.00%		D3AXD0              	100.00%
Bootstrap support for H3AMP6 as seed ortholog is 100%.
Bootstrap support for D3AXD0 as seed ortholog is 100%.

Group of orthologs #2690. Best score 43 bits
Score difference with first non-orthologous sequence - L.chalumnae:43 P.pallidum:43

H3AIG5              	100.00%		D3BQ44              	100.00%
Bootstrap support for H3AIG5 as seed ortholog is 100%.
Bootstrap support for D3BQ44 as seed ortholog is 100%.

Group of orthologs #2691. Best score 41 bits
Score difference with first non-orthologous sequence - L.chalumnae:41 P.pallidum:41

H3A544              	100.00%		D3AZZ1              	100.00%
H3A9P7              	74.25%		
H3AX01              	59.62%		
H3AP01              	6.50%		
Bootstrap support for H3A544 as seed ortholog is 100%.
Bootstrap support for D3AZZ1 as seed ortholog is 100%.