###################################
2070 groups of orthologs
3346 in-paralogs from L.chalumnae
2317 in-paralogs from S.stipitis
Grey zone 0 bits
Score cutoff 40 bits
In-paralogs with confidence less than 0.05 not shown
Sequence overlap cutoff 0.5
Group merging cutoff 0.5
Scoring matrix BLOSUM62
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Group of orthologs #1. Best score 3010 bits
Score difference with first non-orthologous sequence - L.chalumnae:3010 S.stipitis:3010

H3AQI5              	100.00%		A3LYV9              	100.00%
Bootstrap support for H3AQI5 as seed ortholog is 100%.
Bootstrap support for A3LYV9 as seed ortholog is 100%.

Group of orthologs #2. Best score 2554 bits
Score difference with first non-orthologous sequence - L.chalumnae:1447 S.stipitis:2554

H3B1H3              	100.00%		A3LZU2              	100.00%
Bootstrap support for H3B1H3 as seed ortholog is 100%.
Bootstrap support for A3LZU2 as seed ortholog is 100%.

Group of orthologs #3. Best score 2057 bits
Score difference with first non-orthologous sequence - L.chalumnae:693 S.stipitis:2057

H3AU29              	100.00%		A3LXW2              	100.00%
Bootstrap support for H3AU29 as seed ortholog is 100%.
Bootstrap support for A3LXW2 as seed ortholog is 100%.

Group of orthologs #4. Best score 1761 bits
Score difference with first non-orthologous sequence - L.chalumnae:1761 S.stipitis:1761

H3AU80              	100.00%		A3GH39              	100.00%
H3BFJ1              	38.19%		
Bootstrap support for H3AU80 as seed ortholog is 100%.
Bootstrap support for A3GH39 as seed ortholog is 100%.

Group of orthologs #5. Best score 1696 bits
Score difference with first non-orthologous sequence - L.chalumnae:1696 S.stipitis:1696

H3AVP5              	100.00%		A3GID7              	100.00%
Bootstrap support for H3AVP5 as seed ortholog is 100%.
Bootstrap support for A3GID7 as seed ortholog is 100%.

Group of orthologs #6. Best score 1683 bits
Score difference with first non-orthologous sequence - L.chalumnae:1683 S.stipitis:1683

H3BCH2              	100.00%		A3LPB9              	100.00%
Bootstrap support for H3BCH2 as seed ortholog is 100%.
Bootstrap support for A3LPB9 as seed ortholog is 100%.

Group of orthologs #7. Best score 1626 bits
Score difference with first non-orthologous sequence - L.chalumnae:1626 S.stipitis:1626

H3AN14              	100.00%		A3LV67              	100.00%
H3AKV2              	57.29%		
Bootstrap support for H3AN14 as seed ortholog is 100%.
Bootstrap support for A3LV67 as seed ortholog is 100%.

Group of orthologs #8. Best score 1534 bits
Score difference with first non-orthologous sequence - L.chalumnae:1534 S.stipitis:253

H2ZS81              	100.00%		A3GEY0              	100.00%
Bootstrap support for H2ZS81 as seed ortholog is 100%.
Bootstrap support for A3GEY0 as seed ortholog is 99%.

Group of orthologs #9. Best score 1427 bits
Score difference with first non-orthologous sequence - L.chalumnae:1427 S.stipitis:1427

H3A0Y3              	100.00%		A3GFG5              	100.00%
Bootstrap support for H3A0Y3 as seed ortholog is 100%.
Bootstrap support for A3GFG5 as seed ortholog is 100%.

Group of orthologs #10. Best score 1375 bits
Score difference with first non-orthologous sequence - L.chalumnae:1375 S.stipitis:1375

H3BBW8              	100.00%		A3LP81              	100.00%
Bootstrap support for H3BBW8 as seed ortholog is 100%.
Bootstrap support for A3LP81 as seed ortholog is 100%.

Group of orthologs #11. Best score 1298 bits
Score difference with first non-orthologous sequence - L.chalumnae:1298 S.stipitis:1298

H3BGV0              	100.00%		A3GEY3              	100.00%
Bootstrap support for H3BGV0 as seed ortholog is 100%.
Bootstrap support for A3GEY3 as seed ortholog is 100%.

Group of orthologs #12. Best score 1216 bits
Score difference with first non-orthologous sequence - L.chalumnae:1216 S.stipitis:1216

H3AQ24              	100.00%		A3LUA0              	100.00%
Bootstrap support for H3AQ24 as seed ortholog is 100%.
Bootstrap support for A3LUA0 as seed ortholog is 100%.

Group of orthologs #13. Best score 1159 bits
Score difference with first non-orthologous sequence - L.chalumnae:1159 S.stipitis:1159

H3BI03              	100.00%		A3LTD7              	100.00%
Bootstrap support for H3BI03 as seed ortholog is 100%.
Bootstrap support for A3LTD7 as seed ortholog is 100%.

Group of orthologs #14. Best score 1154 bits
Score difference with first non-orthologous sequence - L.chalumnae:1154 S.stipitis:1083

H3A6N0              	100.00%		A3LNB1              	100.00%
H3ASK6              	77.58%		
Bootstrap support for H3A6N0 as seed ortholog is 100%.
Bootstrap support for A3LNB1 as seed ortholog is 100%.

Group of orthologs #15. Best score 1150 bits
Score difference with first non-orthologous sequence - L.chalumnae:1150 S.stipitis:15

H2ZUU5              	100.00%		A3LNC3              	100.00%
Bootstrap support for H2ZUU5 as seed ortholog is 100%.
Bootstrap support for A3LNC3 as seed ortholog is 56%.
Alternative seed ortholog is A3GHC9 (15 bits away from this cluster)

Group of orthologs #16. Best score 1130 bits
Score difference with first non-orthologous sequence - L.chalumnae:825 S.stipitis:585

H3AKY2              	100.00%		A3LY83              	100.00%
Bootstrap support for H3AKY2 as seed ortholog is 100%.
Bootstrap support for A3LY83 as seed ortholog is 100%.

Group of orthologs #17. Best score 1104 bits
Score difference with first non-orthologous sequence - L.chalumnae:1104 S.stipitis:1104

H3A5L4              	100.00%		A3GF24              	100.00%
H3ALH9              	42.17%		
Bootstrap support for H3A5L4 as seed ortholog is 100%.
Bootstrap support for A3GF24 as seed ortholog is 100%.

Group of orthologs #18. Best score 1091 bits
Score difference with first non-orthologous sequence - L.chalumnae:1091 S.stipitis:1091

H3A6E7              	100.00%		A3M082              	100.00%
Bootstrap support for H3A6E7 as seed ortholog is 100%.
Bootstrap support for A3M082 as seed ortholog is 100%.

Group of orthologs #19. Best score 1076 bits
Score difference with first non-orthologous sequence - L.chalumnae:418 S.stipitis:1076

H2ZXQ2              	100.00%		A3LQ33              	100.00%
H3ARY3              	16.18%		
Bootstrap support for H2ZXQ2 as seed ortholog is 100%.
Bootstrap support for A3LQ33 as seed ortholog is 100%.

Group of orthologs #20. Best score 1076 bits
Score difference with first non-orthologous sequence - L.chalumnae:1076 S.stipitis:193

H3AI30              	100.00%		A3LNA5              	100.00%
Bootstrap support for H3AI30 as seed ortholog is 100%.
Bootstrap support for A3LNA5 as seed ortholog is 99%.

Group of orthologs #21. Best score 1073 bits
Score difference with first non-orthologous sequence - L.chalumnae:1073 S.stipitis:818

H3B666              	100.00%		A3LYU1              	100.00%
Bootstrap support for H3B666 as seed ortholog is 100%.
Bootstrap support for A3LYU1 as seed ortholog is 100%.

Group of orthologs #22. Best score 1059 bits
Score difference with first non-orthologous sequence - L.chalumnae:1059 S.stipitis:1059

H3AK74              	100.00%		A3LNZ5              	100.00%
Bootstrap support for H3AK74 as seed ortholog is 100%.
Bootstrap support for A3LNZ5 as seed ortholog is 100%.

Group of orthologs #23. Best score 1037 bits
Score difference with first non-orthologous sequence - L.chalumnae:559 S.stipitis:602

H3AWB6              	100.00%		A3LQG9              	100.00%
Bootstrap support for H3AWB6 as seed ortholog is 100%.
Bootstrap support for A3LQG9 as seed ortholog is 100%.

Group of orthologs #24. Best score 990 bits
Score difference with first non-orthologous sequence - L.chalumnae:990 S.stipitis:990

H3BGE5              	100.00%		A3LYJ8              	100.00%
Bootstrap support for H3BGE5 as seed ortholog is 100%.
Bootstrap support for A3LYJ8 as seed ortholog is 100%.

Group of orthologs #25. Best score 974 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 S.stipitis:275

H2ZV91              	100.00%		A3GGW0              	100.00%
H3AB35              	69.13%		A3LXD9              	37.91%
H2ZV15              	44.30%		
H3AWU4              	40.94%		
H3B4D4              	33.56%		
Bootstrap support for H2ZV91 as seed ortholog is 99%.
Bootstrap support for A3GGW0 as seed ortholog is 100%.

Group of orthologs #26. Best score 960 bits
Score difference with first non-orthologous sequence - L.chalumnae:960 S.stipitis:960

H3AM97              	100.00%		A3LWA8              	100.00%
Bootstrap support for H3AM97 as seed ortholog is 100%.
Bootstrap support for A3LWA8 as seed ortholog is 100%.

Group of orthologs #27. Best score 937 bits
Score difference with first non-orthologous sequence - L.chalumnae:937 S.stipitis:937

H3AKC9              	100.00%		A3LQC8              	100.00%
Bootstrap support for H3AKC9 as seed ortholog is 100%.
Bootstrap support for A3LQC8 as seed ortholog is 100%.

Group of orthologs #28. Best score 931 bits
Score difference with first non-orthologous sequence - L.chalumnae:250 S.stipitis:243

M3XIT3              	100.00%		A3LPF9              	100.00%
H2ZW74              	13.55%		A3LYW5              	7.14%
                    	       		A3LNZ8              	5.19%
                    	       		A3LQB3              	5.14%
Bootstrap support for M3XIT3 as seed ortholog is 99%.
Bootstrap support for A3LPF9 as seed ortholog is 99%.

Group of orthologs #29. Best score 921 bits
Score difference with first non-orthologous sequence - L.chalumnae:921 S.stipitis:921

H3ALQ7              	100.00%		A3LV95              	100.00%
Bootstrap support for H3ALQ7 as seed ortholog is 100%.
Bootstrap support for A3LV95 as seed ortholog is 100%.

Group of orthologs #30. Best score 920 bits
Score difference with first non-orthologous sequence - L.chalumnae:541 S.stipitis:454

H3AEE1              	100.00%		A3LQ23              	100.00%
H3BAQ9              	100.00%		
Bootstrap support for H3AEE1 as seed ortholog is 100%.
Bootstrap support for H3BAQ9 as seed ortholog is 100%.
Bootstrap support for A3LQ23 as seed ortholog is 100%.

Group of orthologs #31. Best score 916 bits
Score difference with first non-orthologous sequence - L.chalumnae:916 S.stipitis:916

H3BA48              	100.00%		A3LP93              	100.00%
                    	       		A3LZQ8              	25.05%
Bootstrap support for H3BA48 as seed ortholog is 100%.
Bootstrap support for A3LP93 as seed ortholog is 100%.

Group of orthologs #32. Best score 904 bits
Score difference with first non-orthologous sequence - L.chalumnae:528 S.stipitis:445

H3AYJ2              	100.00%		A3GGR7              	100.00%
H3A6R4              	23.94%		
Bootstrap support for H3AYJ2 as seed ortholog is 100%.
Bootstrap support for A3GGR7 as seed ortholog is 100%.

Group of orthologs #33. Best score 893 bits
Score difference with first non-orthologous sequence - L.chalumnae:298 S.stipitis:893

H3AQQ2              	100.00%		A3LZW8              	100.00%
H3BAN4              	8.21%		
Bootstrap support for H3AQQ2 as seed ortholog is 100%.
Bootstrap support for A3LZW8 as seed ortholog is 100%.

Group of orthologs #34. Best score 891 bits
Score difference with first non-orthologous sequence - L.chalumnae:891 S.stipitis:891

H3B5X3              	100.00%		A3LVX8              	100.00%
Bootstrap support for H3B5X3 as seed ortholog is 100%.
Bootstrap support for A3LVX8 as seed ortholog is 100%.

Group of orthologs #35. Best score 879 bits
Score difference with first non-orthologous sequence - L.chalumnae:770 S.stipitis:781

H3B8B4              	100.00%		A3LVX3              	100.00%
Bootstrap support for H3B8B4 as seed ortholog is 100%.
Bootstrap support for A3LVX3 as seed ortholog is 100%.

Group of orthologs #36. Best score 878 bits
Score difference with first non-orthologous sequence - L.chalumnae:261 S.stipitis:878

H3AQ38              	100.00%		A3LPD9              	100.00%
H2ZTU7              	57.22%		
H3B357              	49.91%		
Bootstrap support for H3AQ38 as seed ortholog is 100%.
Bootstrap support for A3LPD9 as seed ortholog is 100%.

Group of orthologs #37. Best score 873 bits
Score difference with first non-orthologous sequence - L.chalumnae:527 S.stipitis:873

H3A782              	100.00%		A3LRI3              	100.00%
Bootstrap support for H3A782 as seed ortholog is 100%.
Bootstrap support for A3LRI3 as seed ortholog is 100%.

Group of orthologs #38. Best score 872 bits
Score difference with first non-orthologous sequence - L.chalumnae:872 S.stipitis:872

H3AL55              	100.00%		A3GF70              	100.00%
Bootstrap support for H3AL55 as seed ortholog is 100%.
Bootstrap support for A3GF70 as seed ortholog is 100%.

Group of orthologs #39. Best score 871 bits
Score difference with first non-orthologous sequence - L.chalumnae:871 S.stipitis:871

H3B4L8              	100.00%		A3LTJ7              	100.00%
Bootstrap support for H3B4L8 as seed ortholog is 100%.
Bootstrap support for A3LTJ7 as seed ortholog is 100%.

Group of orthologs #40. Best score 866 bits
Score difference with first non-orthologous sequence - L.chalumnae:315 S.stipitis:866

H3A979              	100.00%		A3GI45              	100.00%
H3A8H4              	42.96%		
H3B961              	28.69%		
H3AF09              	21.05%		
Bootstrap support for H3A979 as seed ortholog is 99%.
Bootstrap support for A3GI45 as seed ortholog is 100%.

Group of orthologs #41. Best score 862 bits
Score difference with first non-orthologous sequence - L.chalumnae:862 S.stipitis:862

M3XKA5              	100.00%		A3GFX3              	100.00%
Bootstrap support for M3XKA5 as seed ortholog is 100%.
Bootstrap support for A3GFX3 as seed ortholog is 100%.

Group of orthologs #42. Best score 857 bits
Score difference with first non-orthologous sequence - L.chalumnae:216 S.stipitis:428

H3AEU0              	100.00%		A3LP11              	100.00%
Bootstrap support for H3AEU0 as seed ortholog is 100%.
Bootstrap support for A3LP11 as seed ortholog is 100%.

Group of orthologs #43. Best score 850 bits
Score difference with first non-orthologous sequence - L.chalumnae:207 S.stipitis:189

H3BFV4              	100.00%		A3LN25              	100.00%
Bootstrap support for H3BFV4 as seed ortholog is 99%.
Bootstrap support for A3LN25 as seed ortholog is 99%.

Group of orthologs #44. Best score 840 bits
Score difference with first non-orthologous sequence - L.chalumnae:201 S.stipitis:840

H3AG06              	100.00%		A3LRN4              	100.00%
Bootstrap support for H3AG06 as seed ortholog is 99%.
Bootstrap support for A3LRN4 as seed ortholog is 100%.

Group of orthologs #45. Best score 834 bits
Score difference with first non-orthologous sequence - L.chalumnae:834 S.stipitis:834

H3ADM5              	100.00%		A3LPZ7              	100.00%
Bootstrap support for H3ADM5 as seed ortholog is 100%.
Bootstrap support for A3LPZ7 as seed ortholog is 100%.

Group of orthologs #46. Best score 832 bits
Score difference with first non-orthologous sequence - L.chalumnae:720 S.stipitis:832

H3AFR8              	100.00%		A3GHG4              	100.00%
H3B7D9              	64.96%		
Bootstrap support for H3AFR8 as seed ortholog is 100%.
Bootstrap support for A3GHG4 as seed ortholog is 100%.

Group of orthologs #47. Best score 820 bits
Score difference with first non-orthologous sequence - L.chalumnae:820 S.stipitis:725

H3AEC4              	100.00%		A3GF06              	100.00%
Bootstrap support for H3AEC4 as seed ortholog is 100%.
Bootstrap support for A3GF06 as seed ortholog is 100%.

Group of orthologs #48. Best score 812 bits
Score difference with first non-orthologous sequence - L.chalumnae:370 S.stipitis:488

H3AHX2              	100.00%		A3M0L3              	100.00%
H3AEX1              	12.63%		
Bootstrap support for H3AHX2 as seed ortholog is 100%.
Bootstrap support for A3M0L3 as seed ortholog is 100%.

Group of orthologs #49. Best score 806 bits
Score difference with first non-orthologous sequence - L.chalumnae:727 S.stipitis:739

H3AXQ9              	100.00%		A3M067              	100.00%
Bootstrap support for H3AXQ9 as seed ortholog is 100%.
Bootstrap support for A3M067 as seed ortholog is 100%.

Group of orthologs #50. Best score 805 bits
Score difference with first non-orthologous sequence - L.chalumnae:734 S.stipitis:286

H3AG44              	100.00%		A3GFA2              	100.00%
H3AIC7              	67.28%		
Bootstrap support for H3AG44 as seed ortholog is 100%.
Bootstrap support for A3GFA2 as seed ortholog is 100%.

Group of orthologs #51. Best score 799 bits
Score difference with first non-orthologous sequence - L.chalumnae:695 S.stipitis:672

H3AUZ5              	100.00%		A3LYW7              	100.00%
Bootstrap support for H3AUZ5 as seed ortholog is 100%.
Bootstrap support for A3LYW7 as seed ortholog is 100%.

Group of orthologs #52. Best score 795 bits
Score difference with first non-orthologous sequence - L.chalumnae:251 S.stipitis:422

H3ALQ1              	100.00%		A3LWK8              	100.00%
H3BH99              	55.67%		
Bootstrap support for H3ALQ1 as seed ortholog is 100%.
Bootstrap support for A3LWK8 as seed ortholog is 100%.

Group of orthologs #53. Best score 784 bits
Score difference with first non-orthologous sequence - L.chalumnae:784 S.stipitis:784

H3AP55              	100.00%		A3LQS2              	100.00%
Bootstrap support for H3AP55 as seed ortholog is 100%.
Bootstrap support for A3LQS2 as seed ortholog is 100%.

Group of orthologs #54. Best score 781 bits
Score difference with first non-orthologous sequence - L.chalumnae:497 S.stipitis:366

H3AJK7              	100.00%		A3LP57              	100.00%
Bootstrap support for H3AJK7 as seed ortholog is 100%.
Bootstrap support for A3LP57 as seed ortholog is 100%.

Group of orthologs #55. Best score 776 bits
Score difference with first non-orthologous sequence - L.chalumnae:523 S.stipitis:776

H3AS78              	100.00%		A3M0C1              	100.00%
Bootstrap support for H3AS78 as seed ortholog is 100%.
Bootstrap support for A3M0C1 as seed ortholog is 100%.

Group of orthologs #56. Best score 774 bits
Score difference with first non-orthologous sequence - L.chalumnae:774 S.stipitis:774

H3AKV9              	100.00%		A3LTA6              	100.00%
Bootstrap support for H3AKV9 as seed ortholog is 100%.
Bootstrap support for A3LTA6 as seed ortholog is 100%.

Group of orthologs #57. Best score 765 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 S.stipitis:79

H3B556              	100.00%		A3LZJ0              	100.00%
H3B1E3              	59.16%		
H3A6P4              	51.19%		
H2ZWK6              	29.32%		
M3XHC6              	20.77%		
Bootstrap support for H3B556 as seed ortholog is 90%.
Bootstrap support for A3LZJ0 as seed ortholog is 85%.

Group of orthologs #58. Best score 762 bits
Score difference with first non-orthologous sequence - L.chalumnae:286 S.stipitis:545

H3ARK4              	100.00%		A3GHZ1              	100.00%
Bootstrap support for H3ARK4 as seed ortholog is 100%.
Bootstrap support for A3GHZ1 as seed ortholog is 100%.

Group of orthologs #59. Best score 761 bits
Score difference with first non-orthologous sequence - L.chalumnae:761 S.stipitis:761

H3AWE2              	100.00%		A3GHT9              	100.00%
Bootstrap support for H3AWE2 as seed ortholog is 100%.
Bootstrap support for A3GHT9 as seed ortholog is 100%.

Group of orthologs #60. Best score 760 bits
Score difference with first non-orthologous sequence - L.chalumnae:760 S.stipitis:760

H3A6Q5              	100.00%		A3LUH0              	100.00%
H3BG06              	43.46%		
H3B5P0              	38.76%		
Bootstrap support for H3A6Q5 as seed ortholog is 100%.
Bootstrap support for A3LUH0 as seed ortholog is 100%.

Group of orthologs #61. Best score 760 bits
Score difference with first non-orthologous sequence - L.chalumnae:760 S.stipitis:760

H3AHD8              	100.00%		A3GHV9              	100.00%
Bootstrap support for H3AHD8 as seed ortholog is 100%.
Bootstrap support for A3GHV9 as seed ortholog is 100%.

Group of orthologs #62. Best score 758 bits
Score difference with first non-orthologous sequence - L.chalumnae:370 S.stipitis:323

H3AHV5              	100.00%		A3LYG2              	100.00%
Bootstrap support for H3AHV5 as seed ortholog is 100%.
Bootstrap support for A3LYG2 as seed ortholog is 100%.

Group of orthologs #63. Best score 758 bits
Score difference with first non-orthologous sequence - L.chalumnae:758 S.stipitis:758

H3B8U3              	100.00%		A3LYF1              	100.00%
Bootstrap support for H3B8U3 as seed ortholog is 100%.
Bootstrap support for A3LYF1 as seed ortholog is 100%.

Group of orthologs #64. Best score 756 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 S.stipitis:548

H3B696              	100.00%		A3LQC6              	100.00%
H3A0X9              	27.18%		
H3B6F8              	7.69%		
Bootstrap support for H3B696 as seed ortholog is 99%.
Bootstrap support for A3LQC6 as seed ortholog is 100%.

Group of orthologs #65. Best score 750 bits
Score difference with first non-orthologous sequence - L.chalumnae:750 S.stipitis:750

H3B4J9              	100.00%		A3LQY8              	100.00%
Bootstrap support for H3B4J9 as seed ortholog is 100%.
Bootstrap support for A3LQY8 as seed ortholog is 100%.

Group of orthologs #66. Best score 744 bits
Score difference with first non-orthologous sequence - L.chalumnae:643 S.stipitis:744

H2ZRK0              	100.00%		A3GGR8              	100.00%
Bootstrap support for H2ZRK0 as seed ortholog is 100%.
Bootstrap support for A3GGR8 as seed ortholog is 100%.

Group of orthologs #67. Best score 733 bits
Score difference with first non-orthologous sequence - L.chalumnae:733 S.stipitis:733

M3XI54              	100.00%		A3LWV7              	100.00%
Bootstrap support for M3XI54 as seed ortholog is 100%.
Bootstrap support for A3LWV7 as seed ortholog is 100%.

Group of orthologs #68. Best score 731 bits
Score difference with first non-orthologous sequence - L.chalumnae:731 S.stipitis:731

H3B8T1              	100.00%		A3LWX5              	100.00%
Bootstrap support for H3B8T1 as seed ortholog is 100%.
Bootstrap support for A3LWX5 as seed ortholog is 100%.

Group of orthologs #69. Best score 729 bits
Score difference with first non-orthologous sequence - L.chalumnae:729 S.stipitis:729

H3AUF4              	100.00%		A3LPM4              	100.00%
Bootstrap support for H3AUF4 as seed ortholog is 100%.
Bootstrap support for A3LPM4 as seed ortholog is 100%.

Group of orthologs #70. Best score 729 bits
Score difference with first non-orthologous sequence - L.chalumnae:729 S.stipitis:729

H3AYF8              	100.00%		A3LU88              	100.00%
Bootstrap support for H3AYF8 as seed ortholog is 100%.
Bootstrap support for A3LU88 as seed ortholog is 100%.

Group of orthologs #71. Best score 728 bits
Score difference with first non-orthologous sequence - L.chalumnae:728 S.stipitis:728

M3XIT6              	100.00%		A3GH46              	100.00%
H3BEI0              	38.90%		
Bootstrap support for M3XIT6 as seed ortholog is 100%.
Bootstrap support for A3GH46 as seed ortholog is 100%.

Group of orthologs #72. Best score 727 bits
Score difference with first non-orthologous sequence - L.chalumnae:261 S.stipitis:186

H3AL07              	100.00%		A3LYI6              	100.00%
Bootstrap support for H3AL07 as seed ortholog is 100%.
Bootstrap support for A3LYI6 as seed ortholog is 99%.

Group of orthologs #73. Best score 725 bits
Score difference with first non-orthologous sequence - L.chalumnae:180 S.stipitis:289

H3BGD8              	100.00%		A3LXK9              	100.00%
H3BD82              	5.64%		
Bootstrap support for H3BGD8 as seed ortholog is 99%.
Bootstrap support for A3LXK9 as seed ortholog is 100%.

Group of orthologs #74. Best score 719 bits
Score difference with first non-orthologous sequence - L.chalumnae:674 S.stipitis:719

H2ZYP0              	100.00%		A3LYE9              	100.00%
Bootstrap support for H2ZYP0 as seed ortholog is 100%.
Bootstrap support for A3LYE9 as seed ortholog is 100%.

Group of orthologs #75. Best score 718 bits
Score difference with first non-orthologous sequence - L.chalumnae:142 S.stipitis:554

H3A7C7              	100.00%		A3LX42              	100.00%
H3B4P9              	91.62%		
H3A954              	91.10%		
H3ASR3              	89.01%		
H3AS44              	77.49%		
H3A580              	61.78%		
H3AGW1              	52.88%		
Bootstrap support for H3A7C7 as seed ortholog is 100%.
Bootstrap support for A3LX42 as seed ortholog is 100%.

Group of orthologs #76. Best score 713 bits
Score difference with first non-orthologous sequence - L.chalumnae:152 S.stipitis:579

H3AGU3              	100.00%		A3LTP2              	100.00%
H3BI79              	65.02%		
H3BI74              	64.26%		
H3AF19              	63.50%		
H3BI69              	63.12%		
H3AW62              	59.32%		
H3BF86              	46.01%		
H2ZYC4              	32.32%		
Bootstrap support for H3AGU3 as seed ortholog is 99%.
Bootstrap support for A3LTP2 as seed ortholog is 100%.

Group of orthologs #77. Best score 712 bits
Score difference with first non-orthologous sequence - L.chalumnae:712 S.stipitis:712

H2ZWM2              	100.00%		A3LUF6              	100.00%
Bootstrap support for H2ZWM2 as seed ortholog is 100%.
Bootstrap support for A3LUF6 as seed ortholog is 100%.

Group of orthologs #78. Best score 698 bits
Score difference with first non-orthologous sequence - L.chalumnae:698 S.stipitis:698

H3AQ97              	100.00%		A3LNA3              	100.00%
Bootstrap support for H3AQ97 as seed ortholog is 100%.
Bootstrap support for A3LNA3 as seed ortholog is 100%.

Group of orthologs #79. Best score 698 bits
Score difference with first non-orthologous sequence - L.chalumnae:698 S.stipitis:698

H3BGX8              	100.00%		A3LYM8              	100.00%
Bootstrap support for H3BGX8 as seed ortholog is 100%.
Bootstrap support for A3LYM8 as seed ortholog is 100%.

Group of orthologs #80. Best score 695 bits
Score difference with first non-orthologous sequence - L.chalumnae:695 S.stipitis:695

H3A4D6              	100.00%		A3M096              	100.00%
Bootstrap support for H3A4D6 as seed ortholog is 100%.
Bootstrap support for A3M096 as seed ortholog is 100%.

Group of orthologs #81. Best score 690 bits
Score difference with first non-orthologous sequence - L.chalumnae:100 S.stipitis:690

H3AAN7              	100.00%		A3LYL7              	100.00%
H3AP83              	47.04%		
H2ZSM1              	24.23%		
Bootstrap support for H3AAN7 as seed ortholog is 93%.
Bootstrap support for A3LYL7 as seed ortholog is 100%.

Group of orthologs #82. Best score 684 bits
Score difference with first non-orthologous sequence - L.chalumnae:684 S.stipitis:684

H3B4J0              	100.00%		A3LQE3              	100.00%
Bootstrap support for H3B4J0 as seed ortholog is 100%.
Bootstrap support for A3LQE3 as seed ortholog is 100%.

Group of orthologs #83. Best score 683 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 S.stipitis:292

H3BBJ9              	100.00%		A3GI55              	100.00%
H2ZUX4              	67.95%		
H3A754              	57.69%		
H3AUT1              	50.00%		
H3AVL6              	48.72%		
H3A626              	44.87%		
H3A440              	39.74%		
Bootstrap support for H3BBJ9 as seed ortholog is 99%.
Bootstrap support for A3GI55 as seed ortholog is 100%.

Group of orthologs #84. Best score 678 bits
Score difference with first non-orthologous sequence - L.chalumnae:152 S.stipitis:678

H3AXY1              	100.00%		A3GH59              	100.00%
Bootstrap support for H3AXY1 as seed ortholog is 87%.
Bootstrap support for A3GH59 as seed ortholog is 100%.

Group of orthologs #85. Best score 674 bits
Score difference with first non-orthologous sequence - L.chalumnae:674 S.stipitis:674

H2ZXA7              	100.00%		A3LVE2              	100.00%
Bootstrap support for H2ZXA7 as seed ortholog is 100%.
Bootstrap support for A3LVE2 as seed ortholog is 100%.

Group of orthologs #86. Best score 674 bits
Score difference with first non-orthologous sequence - L.chalumnae:624 S.stipitis:674

H3A857              	100.00%		A3LTV5              	100.00%
Bootstrap support for H3A857 as seed ortholog is 100%.
Bootstrap support for A3LTV5 as seed ortholog is 100%.

Group of orthologs #87. Best score 671 bits
Score difference with first non-orthologous sequence - L.chalumnae:389 S.stipitis:671

H3ALM5              	100.00%		A3LR24              	100.00%
Bootstrap support for H3ALM5 as seed ortholog is 100%.
Bootstrap support for A3LR24 as seed ortholog is 100%.

Group of orthologs #88. Best score 669 bits
Score difference with first non-orthologous sequence - L.chalumnae:669 S.stipitis:669

H3B705              	100.00%		A3LN60              	100.00%
Bootstrap support for H3B705 as seed ortholog is 100%.
Bootstrap support for A3LN60 as seed ortholog is 100%.

Group of orthologs #89. Best score 664 bits
Score difference with first non-orthologous sequence - L.chalumnae:519 S.stipitis:664

H3BB48              	100.00%		A3LY21              	100.00%
H3A405              	13.07%		
Bootstrap support for H3BB48 as seed ortholog is 100%.
Bootstrap support for A3LY21 as seed ortholog is 100%.

Group of orthologs #90. Best score 663 bits
Score difference with first non-orthologous sequence - L.chalumnae:663 S.stipitis:407

H3ACZ9              	100.00%		A3GEX5              	100.00%
H3B9Q4              	27.90%		
Bootstrap support for H3ACZ9 as seed ortholog is 100%.
Bootstrap support for A3GEX5 as seed ortholog is 100%.

Group of orthologs #91. Best score 660 bits
Score difference with first non-orthologous sequence - L.chalumnae:540 S.stipitis:535

H3B7S7              	100.00%		A3LTI4              	100.00%
H3AXA5              	12.92%		
H3AWA2              	11.80%		
H2ZW02              	9.01%		
Bootstrap support for H3B7S7 as seed ortholog is 100%.
Bootstrap support for A3LTI4 as seed ortholog is 100%.

Group of orthologs #92. Best score 659 bits
Score difference with first non-orthologous sequence - L.chalumnae:659 S.stipitis:659

H3AZU8              	100.00%		A3GI40              	100.00%
Bootstrap support for H3AZU8 as seed ortholog is 100%.
Bootstrap support for A3GI40 as seed ortholog is 100%.

Group of orthologs #93. Best score 656 bits
Score difference with first non-orthologous sequence - L.chalumnae:656 S.stipitis:656

H3BHT6              	100.00%		A3LNS2              	100.00%
Bootstrap support for H3BHT6 as seed ortholog is 100%.
Bootstrap support for A3LNS2 as seed ortholog is 100%.

Group of orthologs #94. Best score 651 bits
Score difference with first non-orthologous sequence - L.chalumnae:502 S.stipitis:651

H3AX27              	100.00%		A3LP29              	100.00%
Bootstrap support for H3AX27 as seed ortholog is 100%.
Bootstrap support for A3LP29 as seed ortholog is 100%.

Group of orthologs #95. Best score 649 bits
Score difference with first non-orthologous sequence - L.chalumnae:455 S.stipitis:361

H2ZZK0              	100.00%		A3GFY8              	100.00%
Bootstrap support for H2ZZK0 as seed ortholog is 100%.
Bootstrap support for A3GFY8 as seed ortholog is 100%.

Group of orthologs #96. Best score 648 bits
Score difference with first non-orthologous sequence - L.chalumnae:388 S.stipitis:277

H3B286              	100.00%		A3LNG1              	100.00%
Bootstrap support for H3B286 as seed ortholog is 100%.
Bootstrap support for A3LNG1 as seed ortholog is 100%.

Group of orthologs #97. Best score 647 bits
Score difference with first non-orthologous sequence - L.chalumnae:647 S.stipitis:647

H3B1D6              	100.00%		A3LTF8              	100.00%
Bootstrap support for H3B1D6 as seed ortholog is 100%.
Bootstrap support for A3LTF8 as seed ortholog is 100%.

Group of orthologs #98. Best score 643 bits
Score difference with first non-orthologous sequence - L.chalumnae:643 S.stipitis:643

H3APY1              	100.00%		A3LZ90              	100.00%
Bootstrap support for H3APY1 as seed ortholog is 100%.
Bootstrap support for A3LZ90 as seed ortholog is 100%.

Group of orthologs #99. Best score 641 bits
Score difference with first non-orthologous sequence - L.chalumnae:641 S.stipitis:641

H3AD90              	100.00%		A3LU95              	100.00%
Bootstrap support for H3AD90 as seed ortholog is 100%.
Bootstrap support for A3LU95 as seed ortholog is 100%.

Group of orthologs #100. Best score 638 bits
Score difference with first non-orthologous sequence - L.chalumnae:285 S.stipitis:638

H3A7G0              	100.00%		A3LNZ1              	100.00%
H3A9W0              	43.81%		A3LMU7              	11.15%
Bootstrap support for H3A7G0 as seed ortholog is 100%.
Bootstrap support for A3LNZ1 as seed ortholog is 100%.

Group of orthologs #101. Best score 638 bits
Score difference with first non-orthologous sequence - L.chalumnae:572 S.stipitis:638

H3AB34              	100.00%		A3GH45              	100.00%
Bootstrap support for H3AB34 as seed ortholog is 100%.
Bootstrap support for A3GH45 as seed ortholog is 100%.

Group of orthologs #102. Best score 636 bits
Score difference with first non-orthologous sequence - L.chalumnae:567 S.stipitis:636

H3AM02              	100.00%		A3LNN0              	100.00%
Bootstrap support for H3AM02 as seed ortholog is 100%.
Bootstrap support for A3LNN0 as seed ortholog is 100%.

Group of orthologs #103. Best score 636 bits
Score difference with first non-orthologous sequence - L.chalumnae:636 S.stipitis:636

H3BEP4              	100.00%		A3LPC5              	100.00%
Bootstrap support for H3BEP4 as seed ortholog is 100%.
Bootstrap support for A3LPC5 as seed ortholog is 100%.

Group of orthologs #104. Best score 635 bits
Score difference with first non-orthologous sequence - L.chalumnae:454 S.stipitis:318

H3B659              	100.00%		A3LNR6              	100.00%
Bootstrap support for H3B659 as seed ortholog is 100%.
Bootstrap support for A3LNR6 as seed ortholog is 100%.

Group of orthologs #105. Best score 634 bits
Score difference with first non-orthologous sequence - L.chalumnae:370 S.stipitis:634

H3B172              	100.00%		A3GHX5              	100.00%
Bootstrap support for H3B172 as seed ortholog is 100%.
Bootstrap support for A3GHX5 as seed ortholog is 100%.

Group of orthologs #106. Best score 634 bits
Score difference with first non-orthologous sequence - L.chalumnae:264 S.stipitis:443

H3AYI8              	100.00%		A3LRI0              	100.00%
Bootstrap support for H3AYI8 as seed ortholog is 99%.
Bootstrap support for A3LRI0 as seed ortholog is 100%.

Group of orthologs #107. Best score 633 bits
Score difference with first non-orthologous sequence - L.chalumnae:633 S.stipitis:633

H2ZU31              	100.00%		A3LXX9              	100.00%
Bootstrap support for H2ZU31 as seed ortholog is 100%.
Bootstrap support for A3LXX9 as seed ortholog is 100%.

Group of orthologs #108. Best score 633 bits
Score difference with first non-orthologous sequence - L.chalumnae:202 S.stipitis:633

H3BIH2              	100.00%		A3LNU0              	100.00%
Bootstrap support for H3BIH2 as seed ortholog is 100%.
Bootstrap support for A3LNU0 as seed ortholog is 100%.

Group of orthologs #109. Best score 630 bits
Score difference with first non-orthologous sequence - L.chalumnae:630 S.stipitis:630

H3BAM6              	100.00%		A3LTI7              	100.00%
Bootstrap support for H3BAM6 as seed ortholog is 100%.
Bootstrap support for A3LTI7 as seed ortholog is 100%.

Group of orthologs #110. Best score 629 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 S.stipitis:90

H3AND9              	100.00%		A3LNY6              	100.00%
Bootstrap support for H3AND9 as seed ortholog is 98%.
Bootstrap support for A3LNY6 as seed ortholog is 94%.

Group of orthologs #111. Best score 629 bits
Score difference with first non-orthologous sequence - L.chalumnae:629 S.stipitis:629

H3BFD1              	100.00%		A3GGF2              	100.00%
Bootstrap support for H3BFD1 as seed ortholog is 100%.
Bootstrap support for A3GGF2 as seed ortholog is 100%.

Group of orthologs #112. Best score 626 bits
Score difference with first non-orthologous sequence - L.chalumnae:626 S.stipitis:626

H3BE66              	100.00%		A3LV22              	100.00%
Bootstrap support for H3BE66 as seed ortholog is 100%.
Bootstrap support for A3LV22 as seed ortholog is 100%.

Group of orthologs #113. Best score 625 bits
Score difference with first non-orthologous sequence - L.chalumnae:625 S.stipitis:625

H3A0A9              	100.00%		A3LN88              	100.00%
H3BFK3              	14.83%		
Bootstrap support for H3A0A9 as seed ortholog is 100%.
Bootstrap support for A3LN88 as seed ortholog is 100%.

Group of orthologs #114. Best score 624 bits
Score difference with first non-orthologous sequence - L.chalumnae:624 S.stipitis:624

H3A5F9              	100.00%		A3GG50              	100.00%
Bootstrap support for H3A5F9 as seed ortholog is 100%.
Bootstrap support for A3GG50 as seed ortholog is 100%.

Group of orthologs #115. Best score 624 bits
Score difference with first non-orthologous sequence - L.chalumnae:624 S.stipitis:624

H3B728              	100.00%		A3GGW5              	100.00%
Bootstrap support for H3B728 as seed ortholog is 100%.
Bootstrap support for A3GGW5 as seed ortholog is 100%.

Group of orthologs #116. Best score 620 bits
Score difference with first non-orthologous sequence - L.chalumnae:620 S.stipitis:620

H3BFQ8              	100.00%		A3GH27              	100.00%
Bootstrap support for H3BFQ8 as seed ortholog is 100%.
Bootstrap support for A3GH27 as seed ortholog is 100%.

Group of orthologs #117. Best score 619 bits
Score difference with first non-orthologous sequence - L.chalumnae:395 S.stipitis:619

H3AWF0              	100.00%		A3LSJ3              	100.00%
Bootstrap support for H3AWF0 as seed ortholog is 100%.
Bootstrap support for A3LSJ3 as seed ortholog is 100%.

Group of orthologs #118. Best score 618 bits
Score difference with first non-orthologous sequence - L.chalumnae:618 S.stipitis:618

H3AGD0              	100.00%		A3LW22              	100.00%
Bootstrap support for H3AGD0 as seed ortholog is 100%.
Bootstrap support for A3LW22 as seed ortholog is 100%.

Group of orthologs #119. Best score 616 bits
Score difference with first non-orthologous sequence - L.chalumnae:616 S.stipitis:616

H3AZ82              	100.00%		A3LNQ5              	100.00%
H3BIK9              	44.29%		A3LPC9              	21.67%
H3B2X1              	30.44%		
Bootstrap support for H3AZ82 as seed ortholog is 100%.
Bootstrap support for A3LNQ5 as seed ortholog is 100%.

Group of orthologs #120. Best score 615 bits
Score difference with first non-orthologous sequence - L.chalumnae:273 S.stipitis:285

H3AXC2              	100.00%		A3LMW4              	100.00%
Bootstrap support for H3AXC2 as seed ortholog is 99%.
Bootstrap support for A3LMW4 as seed ortholog is 100%.

Group of orthologs #121. Best score 614 bits
Score difference with first non-orthologous sequence - L.chalumnae:614 S.stipitis:614

H3A1U0              	100.00%		A3LYS3              	100.00%
Bootstrap support for H3A1U0 as seed ortholog is 100%.
Bootstrap support for A3LYS3 as seed ortholog is 100%.

Group of orthologs #122. Best score 614 bits
Score difference with first non-orthologous sequence - L.chalumnae:400 S.stipitis:313

H3AQX3              	100.00%		A3LTW6              	100.00%
Bootstrap support for H3AQX3 as seed ortholog is 100%.
Bootstrap support for A3LTW6 as seed ortholog is 100%.

Group of orthologs #123. Best score 607 bits
Score difference with first non-orthologous sequence - L.chalumnae:365 S.stipitis:607

H3A672              	100.00%		A3LTZ2              	100.00%
Bootstrap support for H3A672 as seed ortholog is 100%.
Bootstrap support for A3LTZ2 as seed ortholog is 100%.

Group of orthologs #124. Best score 604 bits
Score difference with first non-orthologous sequence - L.chalumnae:604 S.stipitis:604

H3BHY3              	100.00%		A3GEY9              	100.00%
Bootstrap support for H3BHY3 as seed ortholog is 100%.
Bootstrap support for A3GEY9 as seed ortholog is 100%.

Group of orthologs #125. Best score 601 bits
Score difference with first non-orthologous sequence - L.chalumnae:601 S.stipitis:601

H3B242              	100.00%		A3LWF3              	100.00%
H3BGP1              	41.15%		
Bootstrap support for H3B242 as seed ortholog is 100%.
Bootstrap support for A3LWF3 as seed ortholog is 100%.

Group of orthologs #126. Best score 600 bits
Score difference with first non-orthologous sequence - L.chalumnae:37 S.stipitis:600

H3AW63              	100.00%		A3LXD8              	100.00%
H3BGN7              	19.94%		A3LW76              	32.32%
Bootstrap support for H3AW63 as seed ortholog is 78%.
Bootstrap support for A3LXD8 as seed ortholog is 100%.

Group of orthologs #127. Best score 600 bits
Score difference with first non-orthologous sequence - L.chalumnae:600 S.stipitis:600

H3A579              	100.00%		A3GF17              	100.00%
Bootstrap support for H3A579 as seed ortholog is 100%.
Bootstrap support for A3GF17 as seed ortholog is 100%.

Group of orthologs #128. Best score 599 bits
Score difference with first non-orthologous sequence - L.chalumnae:599 S.stipitis:599

H3AIE0              	100.00%		A3LW02              	100.00%
H3A423              	17.75%		
Bootstrap support for H3AIE0 as seed ortholog is 100%.
Bootstrap support for A3LW02 as seed ortholog is 100%.

Group of orthologs #129. Best score 597 bits
Score difference with first non-orthologous sequence - L.chalumnae:444 S.stipitis:597

H3B2F0              	100.00%		A3M0P3              	100.00%
Bootstrap support for H3B2F0 as seed ortholog is 100%.
Bootstrap support for A3M0P3 as seed ortholog is 100%.

Group of orthologs #130. Best score 594 bits
Score difference with first non-orthologous sequence - L.chalumnae:594 S.stipitis:594

H3BCM2              	100.00%		A3LZG4              	100.00%
H3A4H8              	24.34%		
Bootstrap support for H3BCM2 as seed ortholog is 100%.
Bootstrap support for A3LZG4 as seed ortholog is 100%.

Group of orthologs #131. Best score 592 bits
Score difference with first non-orthologous sequence - L.chalumnae:592 S.stipitis:592

H2ZW51              	100.00%		A3LPZ4              	100.00%
Bootstrap support for H2ZW51 as seed ortholog is 100%.
Bootstrap support for A3LPZ4 as seed ortholog is 100%.

Group of orthologs #132. Best score 592 bits
Score difference with first non-orthologous sequence - L.chalumnae:592 S.stipitis:592

H3B206              	100.00%		A3GFP7              	100.00%
Bootstrap support for H3B206 as seed ortholog is 100%.
Bootstrap support for A3GFP7 as seed ortholog is 100%.

Group of orthologs #133. Best score 592 bits
Score difference with first non-orthologous sequence - L.chalumnae:185 S.stipitis:359

M3XI24              	100.00%		A3GFD8              	100.00%
Bootstrap support for M3XI24 as seed ortholog is 99%.
Bootstrap support for A3GFD8 as seed ortholog is 100%.

Group of orthologs #134. Best score 591 bits
Score difference with first non-orthologous sequence - L.chalumnae:591 S.stipitis:591

H3A550              	100.00%		A3LY35              	100.00%
Bootstrap support for H3A550 as seed ortholog is 100%.
Bootstrap support for A3LY35 as seed ortholog is 100%.

Group of orthologs #135. Best score 591 bits
Score difference with first non-orthologous sequence - L.chalumnae:591 S.stipitis:591

H3B133              	100.00%		A3LXF0              	100.00%
Bootstrap support for H3B133 as seed ortholog is 100%.
Bootstrap support for A3LXF0 as seed ortholog is 100%.

Group of orthologs #136. Best score 589 bits
Score difference with first non-orthologous sequence - L.chalumnae:589 S.stipitis:589

H3AGC7              	100.00%		A3LT63              	100.00%
Bootstrap support for H3AGC7 as seed ortholog is 100%.
Bootstrap support for A3LT63 as seed ortholog is 100%.

Group of orthologs #137. Best score 587 bits
Score difference with first non-orthologous sequence - L.chalumnae:587 S.stipitis:587

H3B2Y2              	100.00%		A3LVS2              	100.00%
Bootstrap support for H3B2Y2 as seed ortholog is 100%.
Bootstrap support for A3LVS2 as seed ortholog is 100%.

Group of orthologs #138. Best score 583 bits
Score difference with first non-orthologous sequence - L.chalumnae:195 S.stipitis:200

H3A5T0              	100.00%		A3LVD6              	100.00%
Bootstrap support for H3A5T0 as seed ortholog is 99%.
Bootstrap support for A3LVD6 as seed ortholog is 99%.

Group of orthologs #139. Best score 582 bits
Score difference with first non-orthologous sequence - L.chalumnae:293 S.stipitis:306

H3A9B9              	100.00%		A3LP26              	100.00%
H3ADK4              	73.12%		
H3AUN5              	69.97%		
H3BI64              	68.48%		
Bootstrap support for H3A9B9 as seed ortholog is 99%.
Bootstrap support for A3LP26 as seed ortholog is 100%.

Group of orthologs #140. Best score 582 bits
Score difference with first non-orthologous sequence - L.chalumnae:274 S.stipitis:582

H2ZU93              	100.00%		A3M0D4              	100.00%
H3B892              	41.80%		
Bootstrap support for H2ZU93 as seed ortholog is 100%.
Bootstrap support for A3M0D4 as seed ortholog is 100%.

Group of orthologs #141. Best score 582 bits
Score difference with first non-orthologous sequence - L.chalumnae:582 S.stipitis:475

H3ANZ0              	100.00%		A3LQU4              	100.00%
Bootstrap support for H3ANZ0 as seed ortholog is 100%.
Bootstrap support for A3LQU4 as seed ortholog is 100%.

Group of orthologs #142. Best score 581 bits
Score difference with first non-orthologous sequence - L.chalumnae:202 S.stipitis:280

H3ACR9              	100.00%		A3LQW7              	100.00%
H3B5A9              	14.71%		
Bootstrap support for H3ACR9 as seed ortholog is 100%.
Bootstrap support for A3LQW7 as seed ortholog is 100%.

Group of orthologs #143. Best score 580 bits
Score difference with first non-orthologous sequence - L.chalumnae:580 S.stipitis:580

H3AHS7              	100.00%		A3GI18              	100.00%
Bootstrap support for H3AHS7 as seed ortholog is 100%.
Bootstrap support for A3GI18 as seed ortholog is 100%.

Group of orthologs #144. Best score 579 bits
Score difference with first non-orthologous sequence - L.chalumnae:579 S.stipitis:579

H3B646              	100.00%		A3LXU1              	100.00%
Bootstrap support for H3B646 as seed ortholog is 100%.
Bootstrap support for A3LXU1 as seed ortholog is 100%.

Group of orthologs #145. Best score 577 bits
Score difference with first non-orthologous sequence - L.chalumnae:4 S.stipitis:577

H3B3I0              	100.00%		A3LTS6              	100.00%
H3B2J1              	36.63%		
Bootstrap support for H3B3I0 as seed ortholog is 51%.
Alternative seed ortholog is H3BIG5 (4 bits away from this cluster)
Bootstrap support for A3LTS6 as seed ortholog is 100%.

Group of orthologs #146. Best score 577 bits
Score difference with first non-orthologous sequence - L.chalumnae:577 S.stipitis:577

H3BI66              	100.00%		A3M0F2              	100.00%
Bootstrap support for H3BI66 as seed ortholog is 100%.
Bootstrap support for A3M0F2 as seed ortholog is 100%.

Group of orthologs #147. Best score 575 bits
Score difference with first non-orthologous sequence - L.chalumnae:575 S.stipitis:575

H2ZSS1              	100.00%		A3LPQ1              	100.00%
Bootstrap support for H2ZSS1 as seed ortholog is 100%.
Bootstrap support for A3LPQ1 as seed ortholog is 100%.

Group of orthologs #148. Best score 575 bits
Score difference with first non-orthologous sequence - L.chalumnae:303 S.stipitis:330

H3AGK3              	100.00%		A3LQ01              	100.00%
Bootstrap support for H3AGK3 as seed ortholog is 100%.
Bootstrap support for A3LQ01 as seed ortholog is 100%.

Group of orthologs #149. Best score 573 bits
Score difference with first non-orthologous sequence - L.chalumnae:393 S.stipitis:283

H3BIM2              	100.00%		A3M0A5              	100.00%
Bootstrap support for H3BIM2 as seed ortholog is 100%.
Bootstrap support for A3M0A5 as seed ortholog is 100%.

Group of orthologs #150. Best score 572 bits
Score difference with first non-orthologous sequence - L.chalumnae:572 S.stipitis:572

H3A8E3              	100.00%		A3LNJ6              	100.00%
H3A389              	49.30%		
Bootstrap support for H3A8E3 as seed ortholog is 100%.
Bootstrap support for A3LNJ6 as seed ortholog is 100%.

Group of orthologs #151. Best score 572 bits
Score difference with first non-orthologous sequence - L.chalumnae:220 S.stipitis:572

H3AHA1              	100.00%		A3LQ55              	100.00%
Bootstrap support for H3AHA1 as seed ortholog is 99%.
Bootstrap support for A3LQ55 as seed ortholog is 100%.

Group of orthologs #152. Best score 569 bits
Score difference with first non-orthologous sequence - L.chalumnae:569 S.stipitis:510

H3B8A6              	100.00%		A3LWX0              	100.00%
Bootstrap support for H3B8A6 as seed ortholog is 100%.
Bootstrap support for A3LWX0 as seed ortholog is 100%.

Group of orthologs #153. Best score 568 bits
Score difference with first non-orthologous sequence - L.chalumnae:342 S.stipitis:388

H3BC85              	100.00%		A3LWX3              	100.00%
H3B5V2              	52.75%		
Bootstrap support for H3BC85 as seed ortholog is 100%.
Bootstrap support for A3LWX3 as seed ortholog is 100%.

Group of orthologs #154. Best score 567 bits
Score difference with first non-orthologous sequence - L.chalumnae:343 S.stipitis:567

H3BC00              	100.00%		A3GGU6              	100.00%
M3XGJ9              	10.37%		
Bootstrap support for H3BC00 as seed ortholog is 100%.
Bootstrap support for A3GGU6 as seed ortholog is 100%.

Group of orthologs #155. Best score 567 bits
Score difference with first non-orthologous sequence - L.chalumnae:394 S.stipitis:418

H3B5C3              	100.00%		A3LST5              	100.00%
H2ZY90              	49.46%		
Bootstrap support for H3B5C3 as seed ortholog is 100%.
Bootstrap support for A3LST5 as seed ortholog is 100%.

Group of orthologs #156. Best score 564 bits
Score difference with first non-orthologous sequence - L.chalumnae:316 S.stipitis:564

H3B5Y6              	100.00%		A3GHT7              	100.00%
Bootstrap support for H3B5Y6 as seed ortholog is 100%.
Bootstrap support for A3GHT7 as seed ortholog is 100%.

Group of orthologs #157. Best score 562 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 S.stipitis:153

H3B6N4              	100.00%		A3LZ03              	100.00%
H3ALX3              	36.36%		
H3AR00              	27.27%		
H3AMP2              	25.45%		
Bootstrap support for H3B6N4 as seed ortholog is 98%.
Bootstrap support for A3LZ03 as seed ortholog is 100%.

Group of orthologs #158. Best score 562 bits
Score difference with first non-orthologous sequence - L.chalumnae:562 S.stipitis:562

M3XK23              	100.00%		A3LW01              	100.00%
M3XJ18              	45.86%		
H3BDQ2              	10.08%		
H3AGW4              	7.67%		
Bootstrap support for M3XK23 as seed ortholog is 100%.
Bootstrap support for A3LW01 as seed ortholog is 100%.

Group of orthologs #159. Best score 562 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 S.stipitis:562

H3B3T4              	100.00%		A3LT36              	100.00%
                    	       		A3LR11              	20.86%
Bootstrap support for H3B3T4 as seed ortholog is 94%.
Bootstrap support for A3LT36 as seed ortholog is 100%.

Group of orthologs #160. Best score 561 bits
Score difference with first non-orthologous sequence - L.chalumnae:453 S.stipitis:561

H3B7K3              	100.00%		A3LQD6              	100.00%
H3B528              	60.84%		
H2ZXR3              	24.92%		
Bootstrap support for H3B7K3 as seed ortholog is 100%.
Bootstrap support for A3LQD6 as seed ortholog is 100%.

Group of orthologs #161. Best score 561 bits
Score difference with first non-orthologous sequence - L.chalumnae:371 S.stipitis:561

H3BHP5              	100.00%		A3M0K6              	100.00%
Bootstrap support for H3BHP5 as seed ortholog is 100%.
Bootstrap support for A3M0K6 as seed ortholog is 100%.

Group of orthologs #162. Best score 557 bits
Score difference with first non-orthologous sequence - L.chalumnae:557 S.stipitis:557

H2ZYQ9              	100.00%		A3LXY7              	100.00%
Bootstrap support for H2ZYQ9 as seed ortholog is 100%.
Bootstrap support for A3LXY7 as seed ortholog is 100%.

Group of orthologs #163. Best score 557 bits
Score difference with first non-orthologous sequence - L.chalumnae:399 S.stipitis:337

H3B5L6              	100.00%		A3GHU7              	100.00%
Bootstrap support for H3B5L6 as seed ortholog is 100%.
Bootstrap support for A3GHU7 as seed ortholog is 100%.

Group of orthologs #164. Best score 555 bits
Score difference with first non-orthologous sequence - L.chalumnae:353 S.stipitis:379

H2ZRV2              	100.00%		A3GFV3              	100.00%
Bootstrap support for H2ZRV2 as seed ortholog is 100%.
Bootstrap support for A3GFV3 as seed ortholog is 100%.

Group of orthologs #165. Best score 554 bits
Score difference with first non-orthologous sequence - L.chalumnae:554 S.stipitis:354

H3A5W6              	100.00%		A3LX73              	100.00%
H3A6A5              	35.20%		
H3AQR5              	27.40%		
Bootstrap support for H3A5W6 as seed ortholog is 100%.
Bootstrap support for A3LX73 as seed ortholog is 100%.

Group of orthologs #166. Best score 554 bits
Score difference with first non-orthologous sequence - L.chalumnae:554 S.stipitis:554

H3AIW6              	100.00%		A3LP60              	100.00%
Bootstrap support for H3AIW6 as seed ortholog is 100%.
Bootstrap support for A3LP60 as seed ortholog is 100%.

Group of orthologs #167. Best score 551 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 S.stipitis:383

H2ZZW0              	100.00%		A3LRL2              	100.00%
Bootstrap support for H2ZZW0 as seed ortholog is 99%.
Bootstrap support for A3LRL2 as seed ortholog is 100%.

Group of orthologs #168. Best score 551 bits
Score difference with first non-orthologous sequence - L.chalumnae:401 S.stipitis:551

H3AQW1              	100.00%		A3LUE4              	100.00%
Bootstrap support for H3AQW1 as seed ortholog is 100%.
Bootstrap support for A3LUE4 as seed ortholog is 100%.

Group of orthologs #169. Best score 550 bits
Score difference with first non-orthologous sequence - L.chalumnae:223 S.stipitis:258

H3AVR0              	100.00%		A3LYA7              	100.00%
H2ZZN2              	42.69%		
Bootstrap support for H3AVR0 as seed ortholog is 100%.
Bootstrap support for A3LYA7 as seed ortholog is 100%.

Group of orthologs #170. Best score 550 bits
Score difference with first non-orthologous sequence - L.chalumnae:550 S.stipitis:411

H3BBS2              	100.00%		A3LY69              	100.00%
Bootstrap support for H3BBS2 as seed ortholog is 100%.
Bootstrap support for A3LY69 as seed ortholog is 100%.

Group of orthologs #171. Best score 549 bits
Score difference with first non-orthologous sequence - L.chalumnae:549 S.stipitis:549

M3XIE8              	100.00%		A3LYX2              	100.00%
Bootstrap support for M3XIE8 as seed ortholog is 100%.
Bootstrap support for A3LYX2 as seed ortholog is 100%.

Group of orthologs #172. Best score 548 bits
Score difference with first non-orthologous sequence - L.chalumnae:548 S.stipitis:548

H3AWV3              	100.00%		A3LQ15              	100.00%
Bootstrap support for H3AWV3 as seed ortholog is 100%.
Bootstrap support for A3LQ15 as seed ortholog is 100%.

Group of orthologs #173. Best score 547 bits
Score difference with first non-orthologous sequence - L.chalumnae:547 S.stipitis:547

H3AWH5              	100.00%		A3GGQ5              	100.00%
H3AW35              	66.01%		
Bootstrap support for H3AWH5 as seed ortholog is 100%.
Bootstrap support for A3GGQ5 as seed ortholog is 100%.

Group of orthologs #174. Best score 545 bits
Score difference with first non-orthologous sequence - L.chalumnae:241 S.stipitis:545

H3ALP2              	100.00%		A3GF60              	100.00%
H3B8J9              	27.84%		A3LUS8              	21.43%
H3BBB9              	25.41%		
Bootstrap support for H3ALP2 as seed ortholog is 100%.
Bootstrap support for A3GF60 as seed ortholog is 100%.

Group of orthologs #175. Best score 544 bits
Score difference with first non-orthologous sequence - L.chalumnae:544 S.stipitis:544

H3ARS4              	100.00%		A3LRK4              	100.00%
Bootstrap support for H3ARS4 as seed ortholog is 100%.
Bootstrap support for A3LRK4 as seed ortholog is 100%.

Group of orthologs #176. Best score 540 bits
Score difference with first non-orthologous sequence - L.chalumnae:152 S.stipitis:295

H3A9D1              	100.00%		A3LTX5              	100.00%
Bootstrap support for H3A9D1 as seed ortholog is 99%.
Bootstrap support for A3LTX5 as seed ortholog is 100%.

Group of orthologs #177. Best score 539 bits
Score difference with first non-orthologous sequence - L.chalumnae:423 S.stipitis:440

H3A5M3              	100.00%		A3LXL0              	100.00%
H3AV53              	56.30%		
H3AA31              	44.96%		
Bootstrap support for H3A5M3 as seed ortholog is 100%.
Bootstrap support for A3LXL0 as seed ortholog is 100%.

Group of orthologs #178. Best score 538 bits
Score difference with first non-orthologous sequence - L.chalumnae:307 S.stipitis:116

H3BCT1              	100.00%		A3LZW0              	100.00%
H3A0V7              	69.20%		
Bootstrap support for H3BCT1 as seed ortholog is 100%.
Bootstrap support for A3LZW0 as seed ortholog is 99%.

Group of orthologs #179. Best score 537 bits
Score difference with first non-orthologous sequence - L.chalumnae:537 S.stipitis:537

H3AXM1              	100.00%		A3M0F1              	100.00%
Bootstrap support for H3AXM1 as seed ortholog is 100%.
Bootstrap support for A3M0F1 as seed ortholog is 100%.

Group of orthologs #180. Best score 530 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 S.stipitis:32

H3AN71              	100.00%		A3GHM9              	100.00%
                    	       		A3LR07              	44.40%
Bootstrap support for H3AN71 as seed ortholog is 99%.
Bootstrap support for A3GHM9 as seed ortholog is 76%.

Group of orthologs #181. Best score 530 bits
Score difference with first non-orthologous sequence - L.chalumnae:530 S.stipitis:530

H3BII8              	100.00%		A3LRJ3              	100.00%
                    	       		A3LY87              	10.76%
Bootstrap support for H3BII8 as seed ortholog is 100%.
Bootstrap support for A3LRJ3 as seed ortholog is 100%.

Group of orthologs #182. Best score 529 bits
Score difference with first non-orthologous sequence - L.chalumnae:529 S.stipitis:529

H2ZUS7              	100.00%		A3LQX4              	100.00%
H3AQY8              	48.58%		
Bootstrap support for H2ZUS7 as seed ortholog is 100%.
Bootstrap support for A3LQX4 as seed ortholog is 100%.

Group of orthologs #183. Best score 529 bits
Score difference with first non-orthologous sequence - L.chalumnae:320 S.stipitis:342

H3BGD6              	100.00%		A3GF71              	100.00%
Bootstrap support for H3BGD6 as seed ortholog is 100%.
Bootstrap support for A3GF71 as seed ortholog is 100%.

Group of orthologs #184. Best score 525 bits
Score difference with first non-orthologous sequence - L.chalumnae:525 S.stipitis:525

H3AQ71              	100.00%		A3LTI6              	100.00%
Bootstrap support for H3AQ71 as seed ortholog is 100%.
Bootstrap support for A3LTI6 as seed ortholog is 100%.

Group of orthologs #185. Best score 524 bits
Score difference with first non-orthologous sequence - L.chalumnae:524 S.stipitis:524

H3A922              	100.00%		A3LRH3              	100.00%
Bootstrap support for H3A922 as seed ortholog is 100%.
Bootstrap support for A3LRH3 as seed ortholog is 100%.

Group of orthologs #186. Best score 523 bits
Score difference with first non-orthologous sequence - L.chalumnae:523 S.stipitis:523

H3AFD7              	100.00%		A3GEV9              	100.00%
                    	       		A3M058              	44.83%
Bootstrap support for H3AFD7 as seed ortholog is 100%.
Bootstrap support for A3GEV9 as seed ortholog is 100%.

Group of orthologs #187. Best score 521 bits
Score difference with first non-orthologous sequence - L.chalumnae:521 S.stipitis:521

H2ZZN4              	100.00%		A3LV88              	100.00%
Bootstrap support for H2ZZN4 as seed ortholog is 100%.
Bootstrap support for A3LV88 as seed ortholog is 100%.

Group of orthologs #188. Best score 520 bits
Score difference with first non-orthologous sequence - L.chalumnae:520 S.stipitis:281

H3A9R5              	100.00%		A3LWA5              	100.00%
Bootstrap support for H3A9R5 as seed ortholog is 100%.
Bootstrap support for A3LWA5 as seed ortholog is 100%.

Group of orthologs #189. Best score 517 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 S.stipitis:302

H3BE26              	100.00%		A3LXA5              	100.00%
                    	       		A3LUJ6              	11.12%
Bootstrap support for H3BE26 as seed ortholog is 94%.
Bootstrap support for A3LXA5 as seed ortholog is 100%.

Group of orthologs #190. Best score 515 bits
Score difference with first non-orthologous sequence - L.chalumnae:402 S.stipitis:515

H3A1S5              	100.00%		A3LVT5              	100.00%
Bootstrap support for H3A1S5 as seed ortholog is 100%.
Bootstrap support for A3LVT5 as seed ortholog is 100%.

Group of orthologs #191. Best score 513 bits
Score difference with first non-orthologous sequence - L.chalumnae:513 S.stipitis:513

H3B692              	100.00%		A3LPM2              	100.00%
Bootstrap support for H3B692 as seed ortholog is 100%.
Bootstrap support for A3LPM2 as seed ortholog is 100%.

Group of orthologs #192. Best score 513 bits
Score difference with first non-orthologous sequence - L.chalumnae:513 S.stipitis:513

H3BDS6              	100.00%		A3LR72              	100.00%
Bootstrap support for H3BDS6 as seed ortholog is 100%.
Bootstrap support for A3LR72 as seed ortholog is 100%.

Group of orthologs #193. Best score 512 bits
Score difference with first non-orthologous sequence - L.chalumnae:363 S.stipitis:512

H3AI71              	100.00%		A3LX50              	100.00%
Bootstrap support for H3AI71 as seed ortholog is 100%.
Bootstrap support for A3LX50 as seed ortholog is 100%.

Group of orthologs #194. Best score 511 bits
Score difference with first non-orthologous sequence - L.chalumnae:511 S.stipitis:511

H3AXY9              	100.00%		A3LU50              	100.00%
H3ABQ3              	40.24%		
Bootstrap support for H3AXY9 as seed ortholog is 100%.
Bootstrap support for A3LU50 as seed ortholog is 100%.

Group of orthologs #195. Best score 511 bits
Score difference with first non-orthologous sequence - L.chalumnae:511 S.stipitis:511

H3AYK7              	100.00%		A3GEZ1              	100.00%
Bootstrap support for H3AYK7 as seed ortholog is 100%.
Bootstrap support for A3GEZ1 as seed ortholog is 100%.

Group of orthologs #196. Best score 511 bits
Score difference with first non-orthologous sequence - L.chalumnae:420 S.stipitis:511

H3B2R7              	100.00%		A3LQB6              	100.00%
Bootstrap support for H3B2R7 as seed ortholog is 100%.
Bootstrap support for A3LQB6 as seed ortholog is 100%.

Group of orthologs #197. Best score 510 bits
Score difference with first non-orthologous sequence - L.chalumnae:346 S.stipitis:510

H3ALT2              	100.00%		A3LST8              	100.00%
Bootstrap support for H3ALT2 as seed ortholog is 100%.
Bootstrap support for A3LST8 as seed ortholog is 100%.

Group of orthologs #198. Best score 508 bits
Score difference with first non-orthologous sequence - L.chalumnae:307 S.stipitis:335

H3BEF1              	100.00%		A3GFI4              	100.00%
H3A6E9              	68.32%		
H3A1W8              	64.03%		
Bootstrap support for H3BEF1 as seed ortholog is 100%.
Bootstrap support for A3GFI4 as seed ortholog is 100%.

Group of orthologs #199. Best score 508 bits
Score difference with first non-orthologous sequence - L.chalumnae:157 S.stipitis:508

H3B9W8              	100.00%		A3LP67              	100.00%
Bootstrap support for H3B9W8 as seed ortholog is 99%.
Bootstrap support for A3LP67 as seed ortholog is 100%.

Group of orthologs #200. Best score 506 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 S.stipitis:506

H3A826              	100.00%		A3LWL5              	100.00%
H3ASY1              	54.71%		
H3ASS5              	42.81%		
Bootstrap support for H3A826 as seed ortholog is 92%.
Bootstrap support for A3LWL5 as seed ortholog is 100%.

Group of orthologs #201. Best score 505 bits
Score difference with first non-orthologous sequence - L.chalumnae:505 S.stipitis:505

H3A0G7              	100.00%		A3GFY3              	100.00%
Bootstrap support for H3A0G7 as seed ortholog is 100%.
Bootstrap support for A3GFY3 as seed ortholog is 100%.

Group of orthologs #202. Best score 503 bits
Score difference with first non-orthologous sequence - L.chalumnae:503 S.stipitis:296

H3AXW8              	100.00%		A3GEU5              	100.00%
H3BAN6              	37.27%		
Bootstrap support for H3AXW8 as seed ortholog is 100%.
Bootstrap support for A3GEU5 as seed ortholog is 100%.

Group of orthologs #203. Best score 503 bits
Score difference with first non-orthologous sequence - L.chalumnae:503 S.stipitis:503

H3BFM4              	100.00%		A3LUX2              	100.00%
H3AHP8              	35.46%		
Bootstrap support for H3BFM4 as seed ortholog is 100%.
Bootstrap support for A3LUX2 as seed ortholog is 100%.

Group of orthologs #204. Best score 502 bits
Score difference with first non-orthologous sequence - L.chalumnae:502 S.stipitis:167

H3A9P8              	100.00%		A3LVL5              	100.00%
H3AWQ6              	13.15%		
Bootstrap support for H3A9P8 as seed ortholog is 100%.
Bootstrap support for A3LVL5 as seed ortholog is 98%.

Group of orthologs #205. Best score 502 bits
Score difference with first non-orthologous sequence - L.chalumnae:273 S.stipitis:298

H3AEJ1              	100.00%		A3LYF0              	100.00%
H2ZZU9              	77.59%		
Bootstrap support for H3AEJ1 as seed ortholog is 100%.
Bootstrap support for A3LYF0 as seed ortholog is 100%.

Group of orthologs #206. Best score 501 bits
Score difference with first non-orthologous sequence - L.chalumnae:212 S.stipitis:123

H3AMF8              	100.00%		A3LP07              	100.00%
H3BA28              	87.26%		
Bootstrap support for H3AMF8 as seed ortholog is 100%.
Bootstrap support for A3LP07 as seed ortholog is 100%.

Group of orthologs #207. Best score 501 bits
Score difference with first non-orthologous sequence - L.chalumnae:501 S.stipitis:501

H3AL35              	100.00%		A3LX63              	100.00%
Bootstrap support for H3AL35 as seed ortholog is 100%.
Bootstrap support for A3LX63 as seed ortholog is 100%.

Group of orthologs #208. Best score 499 bits
Score difference with first non-orthologous sequence - L.chalumnae:347 S.stipitis:499

H3A2K4              	100.00%		A3GFY2              	100.00%
H3B416              	24.63%		A3GF02              	20.62%
Bootstrap support for H3A2K4 as seed ortholog is 100%.
Bootstrap support for A3GFY2 as seed ortholog is 100%.

Group of orthologs #209. Best score 499 bits
Score difference with first non-orthologous sequence - L.chalumnae:499 S.stipitis:499

H2ZYA8              	100.00%		A3LYS9              	100.00%
H3BDJ1              	24.64%		
H3AR52              	15.46%		
Bootstrap support for H2ZYA8 as seed ortholog is 100%.
Bootstrap support for A3LYS9 as seed ortholog is 100%.

Group of orthologs #210. Best score 499 bits
Score difference with first non-orthologous sequence - L.chalumnae:410 S.stipitis:360

H2ZS69              	100.00%		A3LVF1              	100.00%
H3AK78              	54.10%		
Bootstrap support for H2ZS69 as seed ortholog is 100%.
Bootstrap support for A3LVF1 as seed ortholog is 100%.

Group of orthologs #211. Best score 497 bits
Score difference with first non-orthologous sequence - L.chalumnae:497 S.stipitis:497

H3A776              	100.00%		A3LYE2              	100.00%
Bootstrap support for H3A776 as seed ortholog is 100%.
Bootstrap support for A3LYE2 as seed ortholog is 100%.

Group of orthologs #212. Best score 496 bits
Score difference with first non-orthologous sequence - L.chalumnae:496 S.stipitis:496

H3APZ1              	100.00%		A3LYZ4              	100.00%
H3B2U0              	59.06%		
H3AM64              	32.44%		
Bootstrap support for H3APZ1 as seed ortholog is 100%.
Bootstrap support for A3LYZ4 as seed ortholog is 100%.

Group of orthologs #213. Best score 495 bits
Score difference with first non-orthologous sequence - L.chalumnae:205 S.stipitis:249

H3A561              	100.00%		A3LRD1              	100.00%
Bootstrap support for H3A561 as seed ortholog is 100%.
Bootstrap support for A3LRD1 as seed ortholog is 100%.

Group of orthologs #214. Best score 493 bits
Score difference with first non-orthologous sequence - L.chalumnae:493 S.stipitis:341

H3ASC3              	100.00%		A3LRX2              	100.00%
H3BEC1              	27.53%		
Bootstrap support for H3ASC3 as seed ortholog is 100%.
Bootstrap support for A3LRX2 as seed ortholog is 100%.

Group of orthologs #215. Best score 493 bits
Score difference with first non-orthologous sequence - L.chalumnae:493 S.stipitis:493

H3ATJ7              	100.00%		A3LX49              	100.00%
Bootstrap support for H3ATJ7 as seed ortholog is 100%.
Bootstrap support for A3LX49 as seed ortholog is 100%.

Group of orthologs #216. Best score 492 bits
Score difference with first non-orthologous sequence - L.chalumnae:492 S.stipitis:492

H3AYK6              	100.00%		A3LUY2              	100.00%
Bootstrap support for H3AYK6 as seed ortholog is 100%.
Bootstrap support for A3LUY2 as seed ortholog is 100%.

Group of orthologs #217. Best score 490 bits
Score difference with first non-orthologous sequence - L.chalumnae:313 S.stipitis:144

H3AH77              	100.00%		A3GHK6              	100.00%
M3XJQ9              	71.16%		
H3B2M5              	67.36%		
Bootstrap support for H3AH77 as seed ortholog is 100%.
Bootstrap support for A3GHK6 as seed ortholog is 99%.

Group of orthologs #218. Best score 490 bits
Score difference with first non-orthologous sequence - L.chalumnae:490 S.stipitis:490

H3AQD0              	100.00%		A3LWJ2              	100.00%
Bootstrap support for H3AQD0 as seed ortholog is 100%.
Bootstrap support for A3LWJ2 as seed ortholog is 100%.

Group of orthologs #219. Best score 489 bits
Score difference with first non-orthologous sequence - L.chalumnae:293 S.stipitis:277

H3AKH6              	100.00%		A3LZT3              	100.00%
Bootstrap support for H3AKH6 as seed ortholog is 100%.
Bootstrap support for A3LZT3 as seed ortholog is 100%.

Group of orthologs #220. Best score 489 bits
Score difference with first non-orthologous sequence - L.chalumnae:489 S.stipitis:489

H3B4Y5              	100.00%		A3GI11              	100.00%
Bootstrap support for H3B4Y5 as seed ortholog is 100%.
Bootstrap support for A3GI11 as seed ortholog is 100%.

Group of orthologs #221. Best score 489 bits
Score difference with first non-orthologous sequence - L.chalumnae:489 S.stipitis:489

H3ATV4              	100.00%		A3LX46              	100.00%
Bootstrap support for H3ATV4 as seed ortholog is 100%.
Bootstrap support for A3LX46 as seed ortholog is 100%.

Group of orthologs #222. Best score 488 bits
Score difference with first non-orthologous sequence - L.chalumnae:488 S.stipitis:488

H3BBC2              	100.00%		A3LPM3              	100.00%
Bootstrap support for H3BBC2 as seed ortholog is 100%.
Bootstrap support for A3LPM3 as seed ortholog is 100%.

Group of orthologs #223. Best score 488 bits
Score difference with first non-orthologous sequence - L.chalumnae:488 S.stipitis:488

H3B8M8              	100.00%		A3LZJ2              	100.00%
Bootstrap support for H3B8M8 as seed ortholog is 100%.
Bootstrap support for A3LZJ2 as seed ortholog is 100%.

Group of orthologs #224. Best score 485 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 S.stipitis:23

M3XGL4              	100.00%		A3LNE3              	100.00%
H3ATS6              	50.80%		
H3BEP7              	42.27%		
H3AUS8              	33.93%		
Bootstrap support for M3XGL4 as seed ortholog is 99%.
Bootstrap support for A3LNE3 as seed ortholog is 70%.
Alternative seed ortholog is A3M013 (23 bits away from this cluster)

Group of orthologs #225. Best score 485 bits
Score difference with first non-orthologous sequence - L.chalumnae:485 S.stipitis:485

H3B5D7              	100.00%		A3LUC6              	100.00%
H3A988              	40.59%		
Bootstrap support for H3B5D7 as seed ortholog is 100%.
Bootstrap support for A3LUC6 as seed ortholog is 100%.

Group of orthologs #226. Best score 485 bits
Score difference with first non-orthologous sequence - L.chalumnae:485 S.stipitis:485

H3BCC7              	100.00%		A3LVT2              	100.00%
H3BCM1              	16.19%		
Bootstrap support for H3BCC7 as seed ortholog is 100%.
Bootstrap support for A3LVT2 as seed ortholog is 100%.

Group of orthologs #227. Best score 485 bits
Score difference with first non-orthologous sequence - L.chalumnae:485 S.stipitis:485

H3AH00              	100.00%		A3LSY2              	100.00%
Bootstrap support for H3AH00 as seed ortholog is 100%.
Bootstrap support for A3LSY2 as seed ortholog is 100%.

Group of orthologs #228. Best score 485 bits
Score difference with first non-orthologous sequence - L.chalumnae:485 S.stipitis:485

H3AIE9              	100.00%		A3LW19              	100.00%
Bootstrap support for H3AIE9 as seed ortholog is 100%.
Bootstrap support for A3LW19 as seed ortholog is 100%.

Group of orthologs #229. Best score 481 bits
Score difference with first non-orthologous sequence - L.chalumnae:481 S.stipitis:481

H3ATJ8              	100.00%		A3LUJ3              	100.00%
H3AAG4              	54.72%		
Bootstrap support for H3ATJ8 as seed ortholog is 100%.
Bootstrap support for A3LUJ3 as seed ortholog is 100%.

Group of orthologs #230. Best score 480 bits
Score difference with first non-orthologous sequence - L.chalumnae:361 S.stipitis:480

H3BBQ4              	100.00%		A3LRJ9              	100.00%
Bootstrap support for H3BBQ4 as seed ortholog is 100%.
Bootstrap support for A3LRJ9 as seed ortholog is 100%.

Group of orthologs #231. Best score 479 bits
Score difference with first non-orthologous sequence - L.chalumnae:479 S.stipitis:479

H3AGW8              	100.00%		A3LNL4              	100.00%
Bootstrap support for H3AGW8 as seed ortholog is 100%.
Bootstrap support for A3LNL4 as seed ortholog is 100%.

Group of orthologs #232. Best score 478 bits
Score difference with first non-orthologous sequence - L.chalumnae:478 S.stipitis:478

H3B8Y9              	100.00%		A3GG22              	100.00%
H3B7N0              	57.41%		
Bootstrap support for H3B8Y9 as seed ortholog is 100%.
Bootstrap support for A3GG22 as seed ortholog is 100%.

Group of orthologs #233. Best score 478 bits
Score difference with first non-orthologous sequence - L.chalumnae:478 S.stipitis:478

H3A5T5              	100.00%		A3LY74              	100.00%
Bootstrap support for H3A5T5 as seed ortholog is 100%.
Bootstrap support for A3LY74 as seed ortholog is 100%.

Group of orthologs #234. Best score 477 bits
Score difference with first non-orthologous sequence - L.chalumnae:477 S.stipitis:477

H3AT42              	100.00%		A3LNC1              	100.00%
H3AWZ8              	37.83%		
Bootstrap support for H3AT42 as seed ortholog is 100%.
Bootstrap support for A3LNC1 as seed ortholog is 100%.

Group of orthologs #235. Best score 475 bits
Score difference with first non-orthologous sequence - L.chalumnae:475 S.stipitis:475

H3A2Q5              	100.00%		A3LRP2              	100.00%
H3BDM9              	100.00%		
H3B034              	80.53%		
H3AWC0              	76.60%		
Bootstrap support for H3A2Q5 as seed ortholog is 100%.
Bootstrap support for H3BDM9 as seed ortholog is 100%.
Bootstrap support for A3LRP2 as seed ortholog is 100%.

Group of orthologs #236. Best score 474 bits
Score difference with first non-orthologous sequence - L.chalumnae:420 S.stipitis:474

H3AZF1              	100.00%		A3LQX8              	100.00%
H3AKS0              	40.53%		
Bootstrap support for H3AZF1 as seed ortholog is 100%.
Bootstrap support for A3LQX8 as seed ortholog is 100%.

Group of orthologs #237. Best score 473 bits
Score difference with first non-orthologous sequence - L.chalumnae:473 S.stipitis:473

H3B4S4              	100.00%		A3LUT0              	100.00%
Bootstrap support for H3B4S4 as seed ortholog is 100%.
Bootstrap support for A3LUT0 as seed ortholog is 100%.

Group of orthologs #238. Best score 472 bits
Score difference with first non-orthologous sequence - L.chalumnae:236 S.stipitis:197

H3APY0              	100.00%		A3GFS0              	100.00%
H3BA91              	54.34%		
Bootstrap support for H3APY0 as seed ortholog is 100%.
Bootstrap support for A3GFS0 as seed ortholog is 99%.

Group of orthologs #239. Best score 471 bits
Score difference with first non-orthologous sequence - L.chalumnae:471 S.stipitis:412

H2ZV38              	100.00%		A3GHC7              	100.00%
Bootstrap support for H2ZV38 as seed ortholog is 100%.
Bootstrap support for A3GHC7 as seed ortholog is 100%.

Group of orthologs #240. Best score 470 bits
Score difference with first non-orthologous sequence - L.chalumnae:470 S.stipitis:470

M3XKB5              	100.00%		A3LXQ5              	100.00%
Bootstrap support for M3XKB5 as seed ortholog is 100%.
Bootstrap support for A3LXQ5 as seed ortholog is 100%.

Group of orthologs #241. Best score 469 bits
Score difference with first non-orthologous sequence - L.chalumnae:164 S.stipitis:469

H3AHF6              	100.00%		A3LT94              	100.00%
H3B1Z2              	33.42%		
Bootstrap support for H3AHF6 as seed ortholog is 100%.
Bootstrap support for A3LT94 as seed ortholog is 100%.

Group of orthologs #242. Best score 468 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 S.stipitis:232

H3AC80              	100.00%		A3LRW3              	100.00%
H3B6C9              	14.01%		
Bootstrap support for H3AC80 as seed ortholog is 99%.
Bootstrap support for A3LRW3 as seed ortholog is 99%.

Group of orthologs #243. Best score 466 bits
Score difference with first non-orthologous sequence - L.chalumnae:301 S.stipitis:351

H3B1M4              	100.00%		A3LQP0              	100.00%
H3A0Z7              	18.58%		
Bootstrap support for H3B1M4 as seed ortholog is 100%.
Bootstrap support for A3LQP0 as seed ortholog is 100%.

Group of orthologs #244. Best score 465 bits
Score difference with first non-orthologous sequence - L.chalumnae:465 S.stipitis:465

H3BBQ3              	100.00%		A3LWP1              	100.00%
H3B0F5              	54.44%		
H3AYA8              	30.07%		
Bootstrap support for H3BBQ3 as seed ortholog is 100%.
Bootstrap support for A3LWP1 as seed ortholog is 100%.

Group of orthologs #245. Best score 465 bits
Score difference with first non-orthologous sequence - L.chalumnae:216 S.stipitis:222

H3ARG2              	100.00%		A3LQA3              	100.00%
H3AFV9              	64.89%		
Bootstrap support for H3ARG2 as seed ortholog is 99%.
Bootstrap support for A3LQA3 as seed ortholog is 100%.

Group of orthologs #246. Best score 463 bits
Score difference with first non-orthologous sequence - L.chalumnae:190 S.stipitis:238

H3A1J5              	100.00%		A3LP00              	100.00%
Bootstrap support for H3A1J5 as seed ortholog is 99%.
Bootstrap support for A3LP00 as seed ortholog is 100%.

Group of orthologs #247. Best score 463 bits
Score difference with first non-orthologous sequence - L.chalumnae:463 S.stipitis:463

H3ASK0              	100.00%		A3GEZ4              	100.00%
Bootstrap support for H3ASK0 as seed ortholog is 100%.
Bootstrap support for A3GEZ4 as seed ortholog is 100%.

Group of orthologs #248. Best score 462 bits
Score difference with first non-orthologous sequence - L.chalumnae:185 S.stipitis:33

H3B9G0              	100.00%		A3LZZ3              	100.00%
Bootstrap support for H3B9G0 as seed ortholog is 99%.
Bootstrap support for A3LZZ3 as seed ortholog is 78%.

Group of orthologs #249. Best score 458 bits
Score difference with first non-orthologous sequence - L.chalumnae:458 S.stipitis:458

H3BEP0              	100.00%		A3LXN7              	100.00%
Bootstrap support for H3BEP0 as seed ortholog is 100%.
Bootstrap support for A3LXN7 as seed ortholog is 100%.

Group of orthologs #250. Best score 457 bits
Score difference with first non-orthologous sequence - L.chalumnae:457 S.stipitis:76

H3AKG0              	100.00%		A3LUC7              	100.00%
Bootstrap support for H3AKG0 as seed ortholog is 100%.
Bootstrap support for A3LUC7 as seed ortholog is 90%.

Group of orthologs #251. Best score 456 bits
Score difference with first non-orthologous sequence - L.chalumnae:290 S.stipitis:456

H3B216              	100.00%		A3LWQ1              	100.00%
H3B3N8              	59.13%		
Bootstrap support for H3B216 as seed ortholog is 100%.
Bootstrap support for A3LWQ1 as seed ortholog is 100%.

Group of orthologs #252. Best score 453 bits
Score difference with first non-orthologous sequence - L.chalumnae:453 S.stipitis:242

H3B6I7              	100.00%		A3LSS9              	100.00%
Bootstrap support for H3B6I7 as seed ortholog is 100%.
Bootstrap support for A3LSS9 as seed ortholog is 100%.

Group of orthologs #253. Best score 452 bits
Score difference with first non-orthologous sequence - L.chalumnae:238 S.stipitis:234

H3B1B6              	100.00%		A3LS22              	100.00%
Bootstrap support for H3B1B6 as seed ortholog is 100%.
Bootstrap support for A3LS22 as seed ortholog is 100%.

Group of orthologs #254. Best score 451 bits
Score difference with first non-orthologous sequence - L.chalumnae:177 S.stipitis:451

H3AR43              	100.00%		A3LQ53              	100.00%
H3B5Y0              	47.94%		
Bootstrap support for H3AR43 as seed ortholog is 99%.
Bootstrap support for A3LQ53 as seed ortholog is 100%.

Group of orthologs #255. Best score 450 bits
Score difference with first non-orthologous sequence - L.chalumnae:450 S.stipitis:450

H3BDN1              	100.00%		A3GI74              	100.00%
Bootstrap support for H3BDN1 as seed ortholog is 100%.
Bootstrap support for A3GI74 as seed ortholog is 100%.

Group of orthologs #256. Best score 449 bits
Score difference with first non-orthologous sequence - L.chalumnae:405 S.stipitis:449

H3A6Y2              	100.00%		A3GFA7              	100.00%
H3AF78              	19.78%		
Bootstrap support for H3A6Y2 as seed ortholog is 100%.
Bootstrap support for A3GFA7 as seed ortholog is 100%.

Group of orthologs #257. Best score 449 bits
Score difference with first non-orthologous sequence - L.chalumnae:449 S.stipitis:449

H3A2H9              	100.00%		A3LRF8              	100.00%
Bootstrap support for H3A2H9 as seed ortholog is 100%.
Bootstrap support for A3LRF8 as seed ortholog is 100%.

Group of orthologs #258. Best score 448 bits
Score difference with first non-orthologous sequence - L.chalumnae:118 S.stipitis:129

H2ZW56              	100.00%		A3LV99              	100.00%
H3AXY8              	68.71%		
H2ZT16              	52.29%		
H3A0Q6              	47.71%		
Bootstrap support for H2ZW56 as seed ortholog is 95%.
Bootstrap support for A3LV99 as seed ortholog is 97%.

Group of orthologs #259. Best score 448 bits
Score difference with first non-orthologous sequence - L.chalumnae:181 S.stipitis:191

H3A259              	100.00%		A3LMW8              	100.00%
H3A1V4              	53.97%		
Bootstrap support for H3A259 as seed ortholog is 99%.
Bootstrap support for A3LMW8 as seed ortholog is 100%.

Group of orthologs #260. Best score 447 bits
Score difference with first non-orthologous sequence - L.chalumnae:447 S.stipitis:447

H3B7X4              	100.00%		A3M001              	100.00%
Bootstrap support for H3B7X4 as seed ortholog is 100%.
Bootstrap support for A3M001 as seed ortholog is 100%.

Group of orthologs #261. Best score 446 bits
Score difference with first non-orthologous sequence - L.chalumnae:446 S.stipitis:446

H3A703              	100.00%		A3GET1              	100.00%
Bootstrap support for H3A703 as seed ortholog is 100%.
Bootstrap support for A3GET1 as seed ortholog is 100%.

Group of orthologs #262. Best score 444 bits
Score difference with first non-orthologous sequence - L.chalumnae:444 S.stipitis:444

H3BEB4              	100.00%		A3GH36              	100.00%
Bootstrap support for H3BEB4 as seed ortholog is 100%.
Bootstrap support for A3GH36 as seed ortholog is 100%.

Group of orthologs #263. Best score 442 bits
Score difference with first non-orthologous sequence - L.chalumnae:442 S.stipitis:442

H3A1P7              	100.00%		A3LYT5              	100.00%
Bootstrap support for H3A1P7 as seed ortholog is 100%.
Bootstrap support for A3LYT5 as seed ortholog is 100%.

Group of orthologs #264. Best score 441 bits
Score difference with first non-orthologous sequence - L.chalumnae:308 S.stipitis:32

H3A126              	100.00%		A3GID5              	100.00%
H3A2F9              	100.00%		
Bootstrap support for H3A126 as seed ortholog is 100%.
Bootstrap support for H3A2F9 as seed ortholog is 100%.
Bootstrap support for A3GID5 as seed ortholog is 82%.

Group of orthologs #265. Best score 441 bits
Score difference with first non-orthologous sequence - L.chalumnae:441 S.stipitis:441

H3AQ44              	100.00%		A3LY29              	100.00%
Bootstrap support for H3AQ44 as seed ortholog is 100%.
Bootstrap support for A3LY29 as seed ortholog is 100%.

Group of orthologs #266. Best score 441 bits
Score difference with first non-orthologous sequence - L.chalumnae:309 S.stipitis:441

H3B8M2              	100.00%		A3LQL4              	100.00%
Bootstrap support for H3B8M2 as seed ortholog is 100%.
Bootstrap support for A3LQL4 as seed ortholog is 100%.

Group of orthologs #267. Best score 440 bits
Score difference with first non-orthologous sequence - L.chalumnae:440 S.stipitis:440

H3AST4              	100.00%		A3LQ70              	100.00%
H3A702              	12.32%		A3LZZ7              	53.85%
                    	       		A3LNP7              	48.42%
Bootstrap support for H3AST4 as seed ortholog is 100%.
Bootstrap support for A3LQ70 as seed ortholog is 100%.

Group of orthologs #268. Best score 440 bits
Score difference with first non-orthologous sequence - L.chalumnae:167 S.stipitis:440

H3AKB8              	100.00%		A3GHH1              	100.00%
Bootstrap support for H3AKB8 as seed ortholog is 99%.
Bootstrap support for A3GHH1 as seed ortholog is 100%.

Group of orthologs #269. Best score 440 bits
Score difference with first non-orthologous sequence - L.chalumnae:440 S.stipitis:440

H3AI66              	100.00%		A3M0A1              	100.00%
Bootstrap support for H3AI66 as seed ortholog is 100%.
Bootstrap support for A3M0A1 as seed ortholog is 100%.

Group of orthologs #270. Best score 440 bits
Score difference with first non-orthologous sequence - L.chalumnae:314 S.stipitis:440

H3AWF8              	100.00%		A3LYM2              	100.00%
Bootstrap support for H3AWF8 as seed ortholog is 100%.
Bootstrap support for A3LYM2 as seed ortholog is 100%.

Group of orthologs #271. Best score 438 bits
Score difference with first non-orthologous sequence - L.chalumnae:191 S.stipitis:438

H3A8U4              	100.00%		A3LW17              	100.00%
Bootstrap support for H3A8U4 as seed ortholog is 99%.
Bootstrap support for A3LW17 as seed ortholog is 100%.

Group of orthologs #272. Best score 437 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 S.stipitis:70

H3B050              	100.00%		A3LQ72              	100.00%
                    	       		A3GH56              	18.09%
Bootstrap support for H3B050 as seed ortholog is 99%.
Bootstrap support for A3LQ72 as seed ortholog is 88%.

Group of orthologs #273. Best score 436 bits
Score difference with first non-orthologous sequence - L.chalumnae:295 S.stipitis:342

H3A660              	100.00%		A3LYL8              	100.00%
Bootstrap support for H3A660 as seed ortholog is 100%.
Bootstrap support for A3LYL8 as seed ortholog is 100%.

Group of orthologs #274. Best score 436 bits
Score difference with first non-orthologous sequence - L.chalumnae:314 S.stipitis:278

H3B6Y3              	100.00%		A3LV40              	100.00%
Bootstrap support for H3B6Y3 as seed ortholog is 100%.
Bootstrap support for A3LV40 as seed ortholog is 100%.

Group of orthologs #275. Best score 434 bits
Score difference with first non-orthologous sequence - L.chalumnae:434 S.stipitis:228

H3ADZ0              	100.00%		A3LRC4              	100.00%
Bootstrap support for H3ADZ0 as seed ortholog is 100%.
Bootstrap support for A3LRC4 as seed ortholog is 100%.

Group of orthologs #276. Best score 434 bits
Score difference with first non-orthologous sequence - L.chalumnae:434 S.stipitis:434

H3AEL6              	100.00%		A3LY41              	100.00%
Bootstrap support for H3AEL6 as seed ortholog is 100%.
Bootstrap support for A3LY41 as seed ortholog is 100%.

Group of orthologs #277. Best score 434 bits
Score difference with first non-orthologous sequence - L.chalumnae:434 S.stipitis:434

H3ANL6              	100.00%		A3LVH6              	100.00%
Bootstrap support for H3ANL6 as seed ortholog is 100%.
Bootstrap support for A3LVH6 as seed ortholog is 100%.

Group of orthologs #278. Best score 433 bits
Score difference with first non-orthologous sequence - L.chalumnae:433 S.stipitis:433

H3BA52              	100.00%		A3LX91              	100.00%
H2ZVE2              	32.53%		
Bootstrap support for H3BA52 as seed ortholog is 100%.
Bootstrap support for A3LX91 as seed ortholog is 100%.

Group of orthologs #279. Best score 433 bits
Score difference with first non-orthologous sequence - L.chalumnae:433 S.stipitis:433

H3A3L5              	100.00%		A3LW56              	100.00%
Bootstrap support for H3A3L5 as seed ortholog is 100%.
Bootstrap support for A3LW56 as seed ortholog is 100%.

Group of orthologs #280. Best score 432 bits
Score difference with first non-orthologous sequence - L.chalumnae:432 S.stipitis:432

H3BHN2              	100.00%		A3LQ74              	100.00%
H3AV76              	61.34%		
Bootstrap support for H3BHN2 as seed ortholog is 100%.
Bootstrap support for A3LQ74 as seed ortholog is 100%.

Group of orthologs #281. Best score 432 bits
Score difference with first non-orthologous sequence - L.chalumnae:432 S.stipitis:432

H3B669              	100.00%		A3M037              	100.00%
H2ZW57              	56.53%		
Bootstrap support for H3B669 as seed ortholog is 100%.
Bootstrap support for A3M037 as seed ortholog is 100%.

Group of orthologs #282. Best score 431 bits
Score difference with first non-orthologous sequence - L.chalumnae:431 S.stipitis:431

H3AG19              	100.00%		A3LXP8              	100.00%
H3ASG2              	59.88%		
H3A196              	59.16%		
Bootstrap support for H3AG19 as seed ortholog is 100%.
Bootstrap support for A3LXP8 as seed ortholog is 100%.

Group of orthologs #283. Best score 431 bits
Score difference with first non-orthologous sequence - L.chalumnae:208 S.stipitis:194

H3AU41              	100.00%		A3LSN3              	100.00%
Bootstrap support for H3AU41 as seed ortholog is 100%.
Bootstrap support for A3LSN3 as seed ortholog is 99%.

Group of orthologs #284. Best score 431 bits
Score difference with first non-orthologous sequence - L.chalumnae:431 S.stipitis:431

H3B5H5              	100.00%		A3LNR3              	100.00%
Bootstrap support for H3B5H5 as seed ortholog is 100%.
Bootstrap support for A3LNR3 as seed ortholog is 100%.

Group of orthologs #285. Best score 430 bits
Score difference with first non-orthologous sequence - L.chalumnae:430 S.stipitis:430

H3ALV8              	100.00%		A3LXR1              	100.00%
Bootstrap support for H3ALV8 as seed ortholog is 100%.
Bootstrap support for A3LXR1 as seed ortholog is 100%.

Group of orthologs #286. Best score 430 bits
Score difference with first non-orthologous sequence - L.chalumnae:330 S.stipitis:430

H3AZV3              	100.00%		A3LNJ0              	100.00%
Bootstrap support for H3AZV3 as seed ortholog is 100%.
Bootstrap support for A3LNJ0 as seed ortholog is 100%.

Group of orthologs #287. Best score 428 bits
Score difference with first non-orthologous sequence - L.chalumnae:428 S.stipitis:428

H3BC39              	100.00%		A3LU56              	100.00%
Bootstrap support for H3BC39 as seed ortholog is 100%.
Bootstrap support for A3LU56 as seed ortholog is 100%.

Group of orthologs #288. Best score 427 bits
Score difference with first non-orthologous sequence - L.chalumnae:335 S.stipitis:346

H3AJZ4              	100.00%		A3LS68              	100.00%
Bootstrap support for H3AJZ4 as seed ortholog is 100%.
Bootstrap support for A3LS68 as seed ortholog is 100%.

Group of orthologs #289. Best score 427 bits
Score difference with first non-orthologous sequence - L.chalumnae:427 S.stipitis:427

H3AQ45              	100.00%		A3LUZ6              	100.00%
Bootstrap support for H3AQ45 as seed ortholog is 100%.
Bootstrap support for A3LUZ6 as seed ortholog is 100%.

Group of orthologs #290. Best score 426 bits
Score difference with first non-orthologous sequence - L.chalumnae:426 S.stipitis:426

H3A1Z2              	100.00%		A3GHY8              	100.00%
Bootstrap support for H3A1Z2 as seed ortholog is 100%.
Bootstrap support for A3GHY8 as seed ortholog is 100%.

Group of orthologs #291. Best score 426 bits
Score difference with first non-orthologous sequence - L.chalumnae:242 S.stipitis:426

H3AZZ8              	100.00%		A3LTA3              	100.00%
Bootstrap support for H3AZZ8 as seed ortholog is 100%.
Bootstrap support for A3LTA3 as seed ortholog is 100%.

Group of orthologs #292. Best score 425 bits
Score difference with first non-orthologous sequence - L.chalumnae:425 S.stipitis:67

H3AJ55              	100.00%		A3LMX4              	100.00%
H3AYY8              	10.05%		
Bootstrap support for H3AJ55 as seed ortholog is 100%.
Bootstrap support for A3LMX4 as seed ortholog is 86%.

Group of orthologs #293. Best score 425 bits
Score difference with first non-orthologous sequence - L.chalumnae:425 S.stipitis:425

H3A134              	100.00%		A3LT44              	100.00%
Bootstrap support for H3A134 as seed ortholog is 100%.
Bootstrap support for A3LT44 as seed ortholog is 100%.

Group of orthologs #294. Best score 425 bits
Score difference with first non-orthologous sequence - L.chalumnae:425 S.stipitis:425

H3APA8              	100.00%		A3LZY4              	100.00%
Bootstrap support for H3APA8 as seed ortholog is 100%.
Bootstrap support for A3LZY4 as seed ortholog is 100%.

Group of orthologs #295. Best score 424 bits
Score difference with first non-orthologous sequence - L.chalumnae:424 S.stipitis:424

H3BFE7              	100.00%		A3GG31              	100.00%
H3AY53              	6.88%		
Bootstrap support for H3BFE7 as seed ortholog is 100%.
Bootstrap support for A3GG31 as seed ortholog is 100%.

Group of orthologs #296. Best score 424 bits
Score difference with first non-orthologous sequence - L.chalumnae:220 S.stipitis:424

H3AB98              	100.00%		A3LN13              	100.00%
Bootstrap support for H3AB98 as seed ortholog is 99%.
Bootstrap support for A3LN13 as seed ortholog is 100%.

Group of orthologs #297. Best score 422 bits
Score difference with first non-orthologous sequence - L.chalumnae:422 S.stipitis:132

H3BC66              	100.00%		A3LZ36              	100.00%
H3BHT4              	48.20%		
H3B1H5              	43.14%		
H3AT49              	41.01%		
Bootstrap support for H3BC66 as seed ortholog is 100%.
Bootstrap support for A3LZ36 as seed ortholog is 99%.

Group of orthologs #298. Best score 422 bits
Score difference with first non-orthologous sequence - L.chalumnae:422 S.stipitis:422

H3A0U7              	100.00%		A3LY27              	100.00%
H3AEK6              	58.73%		
H3AGM4              	54.72%		
Bootstrap support for H3A0U7 as seed ortholog is 100%.
Bootstrap support for A3LY27 as seed ortholog is 100%.

Group of orthologs #299. Best score 422 bits
Score difference with first non-orthologous sequence - L.chalumnae:422 S.stipitis:168

H2ZVZ4              	100.00%		A3LQF5              	100.00%
Bootstrap support for H2ZVZ4 as seed ortholog is 100%.
Bootstrap support for A3LQF5 as seed ortholog is 99%.

Group of orthologs #300. Best score 421 bits
Score difference with first non-orthologous sequence - L.chalumnae:162 S.stipitis:205

H3A5L2              	100.00%		A3GG91              	100.00%
H2ZXJ6              	29.76%		
Bootstrap support for H3A5L2 as seed ortholog is 100%.
Bootstrap support for A3GG91 as seed ortholog is 100%.

Group of orthologs #301. Best score 420 bits
Score difference with first non-orthologous sequence - L.chalumnae:118 S.stipitis:334

H3ARA3              	100.00%		A3LQK0              	100.00%
H3BAQ6              	37.40%		
H3A3X6              	7.24%		
Bootstrap support for H3ARA3 as seed ortholog is 99%.
Bootstrap support for A3LQK0 as seed ortholog is 100%.

Group of orthologs #302. Best score 420 bits
Score difference with first non-orthologous sequence - L.chalumnae:420 S.stipitis:420

H3AB29              	100.00%		A3LQJ7              	100.00%
Bootstrap support for H3AB29 as seed ortholog is 100%.
Bootstrap support for A3LQJ7 as seed ortholog is 100%.

Group of orthologs #303. Best score 419 bits
Score difference with first non-orthologous sequence - L.chalumnae:419 S.stipitis:419

H3A1Q8              	100.00%		A3LY60              	100.00%
Bootstrap support for H3A1Q8 as seed ortholog is 100%.
Bootstrap support for A3LY60 as seed ortholog is 100%.

Group of orthologs #304. Best score 419 bits
Score difference with first non-orthologous sequence - L.chalumnae:203 S.stipitis:419

H3BGP9              	100.00%		A3LTK0              	100.00%
Bootstrap support for H3BGP9 as seed ortholog is 99%.
Bootstrap support for A3LTK0 as seed ortholog is 100%.

Group of orthologs #305. Best score 417 bits
Score difference with first non-orthologous sequence - L.chalumnae:417 S.stipitis:417

M3XKA9              	100.00%		A3LUK4              	100.00%
Bootstrap support for M3XKA9 as seed ortholog is 100%.
Bootstrap support for A3LUK4 as seed ortholog is 100%.

Group of orthologs #306. Best score 415 bits
Score difference with first non-orthologous sequence - L.chalumnae:21 S.stipitis:415

H3AZP8              	100.00%		A3GHJ5              	100.00%
H3BA09              	35.54%		
H3BG46              	9.87%		
H3A0J1              	5.43%		
Bootstrap support for H3AZP8 as seed ortholog is 67%.
Alternative seed ortholog is H3AFJ3 (21 bits away from this cluster)
Bootstrap support for A3GHJ5 as seed ortholog is 100%.

Group of orthologs #307. Best score 415 bits
Score difference with first non-orthologous sequence - L.chalumnae:415 S.stipitis:415

H3A2G3              	100.00%		A3GFF3              	100.00%
Bootstrap support for H3A2G3 as seed ortholog is 100%.
Bootstrap support for A3GFF3 as seed ortholog is 100%.

Group of orthologs #308. Best score 415 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 S.stipitis:20

H3BFY5              	100.00%		A3LXC5              	100.00%
Bootstrap support for H3BFY5 as seed ortholog is 99%.
Bootstrap support for A3LXC5 as seed ortholog is 72%.
Alternative seed ortholog is A3M0C2 (20 bits away from this cluster)

Group of orthologs #309. Best score 414 bits
Score difference with first non-orthologous sequence - L.chalumnae:414 S.stipitis:414

H3BD51              	100.00%		A3LY03              	100.00%
Bootstrap support for H3BD51 as seed ortholog is 100%.
Bootstrap support for A3LY03 as seed ortholog is 100%.

Group of orthologs #310. Best score 413 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 S.stipitis:168

H3AXH7              	100.00%		A3GFR9              	100.00%
H3AGW0              	27.06%		
H3B9K5              	25.08%		
Bootstrap support for H3AXH7 as seed ortholog is 99%.
Bootstrap support for A3GFR9 as seed ortholog is 99%.

Group of orthologs #311. Best score 413 bits
Score difference with first non-orthologous sequence - L.chalumnae:413 S.stipitis:413

H2ZVC0              	100.00%		A3LUK5              	100.00%
Bootstrap support for H2ZVC0 as seed ortholog is 100%.
Bootstrap support for A3LUK5 as seed ortholog is 100%.

Group of orthologs #312. Best score 412 bits
Score difference with first non-orthologous sequence - L.chalumnae:412 S.stipitis:412

H2ZW85              	100.00%		A3LWV8              	100.00%
Bootstrap support for H2ZW85 as seed ortholog is 100%.
Bootstrap support for A3LWV8 as seed ortholog is 100%.

Group of orthologs #313. Best score 412 bits
Score difference with first non-orthologous sequence - L.chalumnae:412 S.stipitis:412

H3AFW6              	100.00%		A3GF66              	100.00%
Bootstrap support for H3AFW6 as seed ortholog is 100%.
Bootstrap support for A3GF66 as seed ortholog is 100%.

Group of orthologs #314. Best score 412 bits
Score difference with first non-orthologous sequence - L.chalumnae:8 S.stipitis:412

H3B5F1              	100.00%		A3M072              	100.00%
Bootstrap support for H3B5F1 as seed ortholog is 93%.
Bootstrap support for A3M072 as seed ortholog is 100%.

Group of orthologs #315. Best score 412 bits
Score difference with first non-orthologous sequence - L.chalumnae:203 S.stipitis:412

M3XJT3              	100.00%		A3LYR5              	100.00%
Bootstrap support for M3XJT3 as seed ortholog is 99%.
Bootstrap support for A3LYR5 as seed ortholog is 100%.

Group of orthologs #316. Best score 411 bits
Score difference with first non-orthologous sequence - L.chalumnae:411 S.stipitis:109

H2ZVT3              	100.00%		A3LQ67              	100.00%
H3ASU0              	7.75%		
H3B943              	7.50%		
Bootstrap support for H2ZVT3 as seed ortholog is 100%.
Bootstrap support for A3LQ67 as seed ortholog is 97%.

Group of orthologs #317. Best score 410 bits
Score difference with first non-orthologous sequence - L.chalumnae:410 S.stipitis:295

H3ABB7              	100.00%		A3LN65              	100.00%
                    	       		A3LVU8              	22.18%
Bootstrap support for H3ABB7 as seed ortholog is 100%.
Bootstrap support for A3LN65 as seed ortholog is 100%.

Group of orthologs #318. Best score 410 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 S.stipitis:61

H3A5A8              	100.00%		A3LR17              	100.00%
Bootstrap support for H3A5A8 as seed ortholog is 98%.
Bootstrap support for A3LR17 as seed ortholog is 89%.

Group of orthologs #319. Best score 410 bits
Score difference with first non-orthologous sequence - L.chalumnae:410 S.stipitis:410

H3ABN2              	100.00%		A3GGS9              	100.00%
Bootstrap support for H3ABN2 as seed ortholog is 100%.
Bootstrap support for A3GGS9 as seed ortholog is 100%.

Group of orthologs #320. Best score 408 bits
Score difference with first non-orthologous sequence - L.chalumnae:215 S.stipitis:215

H2ZY13              	100.00%		A3LQ34              	100.00%
H3AJ76              	41.67%		
Bootstrap support for H2ZY13 as seed ortholog is 99%.
Bootstrap support for A3LQ34 as seed ortholog is 99%.

Group of orthologs #321. Best score 408 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 S.stipitis:408

H3A030              	100.00%		A3M063              	100.00%
Bootstrap support for H3A030 as seed ortholog is 99%.
Bootstrap support for A3M063 as seed ortholog is 100%.

Group of orthologs #322. Best score 408 bits
Score difference with first non-orthologous sequence - L.chalumnae:408 S.stipitis:408

H3ADS0              	100.00%		A3LS47              	100.00%
Bootstrap support for H3ADS0 as seed ortholog is 100%.
Bootstrap support for A3LS47 as seed ortholog is 100%.

Group of orthologs #323. Best score 407 bits
Score difference with first non-orthologous sequence - L.chalumnae:407 S.stipitis:407

H3A9Y8              	100.00%		A3LPA2              	100.00%
Bootstrap support for H3A9Y8 as seed ortholog is 100%.
Bootstrap support for A3LPA2 as seed ortholog is 100%.

Group of orthologs #324. Best score 407 bits
Score difference with first non-orthologous sequence - L.chalumnae:407 S.stipitis:407

H3ALU3              	100.00%		A3LPS9              	100.00%
Bootstrap support for H3ALU3 as seed ortholog is 100%.
Bootstrap support for A3LPS9 as seed ortholog is 100%.

Group of orthologs #325. Best score 406 bits
Score difference with first non-orthologous sequence - L.chalumnae:406 S.stipitis:406

H3BI07              	100.00%		A3LT99              	100.00%
Bootstrap support for H3BI07 as seed ortholog is 100%.
Bootstrap support for A3LT99 as seed ortholog is 100%.

Group of orthologs #326. Best score 404 bits
Score difference with first non-orthologous sequence - L.chalumnae:227 S.stipitis:404

H3BBH3              	100.00%		A3M042              	100.00%
Bootstrap support for H3BBH3 as seed ortholog is 99%.
Bootstrap support for A3M042 as seed ortholog is 100%.

Group of orthologs #327. Best score 403 bits
Score difference with first non-orthologous sequence - L.chalumnae:403 S.stipitis:403

H3ABS4              	100.00%		A3GGJ5              	100.00%
Bootstrap support for H3ABS4 as seed ortholog is 100%.
Bootstrap support for A3GGJ5 as seed ortholog is 100%.

Group of orthologs #328. Best score 402 bits
Score difference with first non-orthologous sequence - L.chalumnae:223 S.stipitis:150

H3ACJ6              	100.00%		A3LUB6              	100.00%
H3AT64              	44.95%		
Bootstrap support for H3ACJ6 as seed ortholog is 100%.
Bootstrap support for A3LUB6 as seed ortholog is 99%.

Group of orthologs #329. Best score 401 bits
Score difference with first non-orthologous sequence - L.chalumnae:401 S.stipitis:401

H3B1Y6              	100.00%		A3LUU1              	100.00%
Bootstrap support for H3B1Y6 as seed ortholog is 100%.
Bootstrap support for A3LUU1 as seed ortholog is 100%.

Group of orthologs #330. Best score 400 bits
Score difference with first non-orthologous sequence - L.chalumnae:228 S.stipitis:400

H3A141              	100.00%		A3GFG0              	100.00%
                    	       		A3LZ47              	96.83%
Bootstrap support for H3A141 as seed ortholog is 100%.
Bootstrap support for A3GFG0 as seed ortholog is 100%.

Group of orthologs #331. Best score 400 bits
Score difference with first non-orthologous sequence - L.chalumnae:237 S.stipitis:27

H2ZUU1              	100.00%		A3LS12              	100.00%
H3A7R5              	61.11%		
Bootstrap support for H2ZUU1 as seed ortholog is 100%.
Bootstrap support for A3LS12 as seed ortholog is 70%.
Alternative seed ortholog is A3LPP7 (27 bits away from this cluster)

Group of orthologs #332. Best score 400 bits
Score difference with first non-orthologous sequence - L.chalumnae:186 S.stipitis:400

H3A2S9              	100.00%		A3LZ69              	100.00%
H3A9U2              	54.57%		
Bootstrap support for H3A2S9 as seed ortholog is 99%.
Bootstrap support for A3LZ69 as seed ortholog is 100%.

Group of orthologs #333. Best score 396 bits
Score difference with first non-orthologous sequence - L.chalumnae:226 S.stipitis:396

H3ACG3              	100.00%		A3LTF5              	100.00%
H3B2X6              	51.80%		
Bootstrap support for H3ACG3 as seed ortholog is 99%.
Bootstrap support for A3LTF5 as seed ortholog is 100%.

Group of orthologs #334. Best score 396 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 S.stipitis:155

H3BBN1              	100.00%		A3LNL1              	100.00%
Bootstrap support for H3BBN1 as seed ortholog is 99%.
Bootstrap support for A3LNL1 as seed ortholog is 99%.

Group of orthologs #335. Best score 396 bits
Score difference with first non-orthologous sequence - L.chalumnae:187 S.stipitis:396

M3XJ87              	100.00%		A3LTV2              	100.00%
Bootstrap support for M3XJ87 as seed ortholog is 100%.
Bootstrap support for A3LTV2 as seed ortholog is 100%.

Group of orthologs #336. Best score 395 bits
Score difference with first non-orthologous sequence - L.chalumnae:395 S.stipitis:395

H3A6D2              	100.00%		A3LWR2              	100.00%
Bootstrap support for H3A6D2 as seed ortholog is 100%.
Bootstrap support for A3LWR2 as seed ortholog is 100%.

Group of orthologs #337. Best score 395 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 S.stipitis:395

H3B7A9              	100.00%		A3LSC7              	100.00%
Bootstrap support for H3B7A9 as seed ortholog is 99%.
Bootstrap support for A3LSC7 as seed ortholog is 100%.

Group of orthologs #338. Best score 394 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 S.stipitis:43

H3BI57              	100.00%		A3LXZ6              	100.00%
H3AGI8              	34.58%		
Bootstrap support for H3BI57 as seed ortholog is 99%.
Bootstrap support for A3LXZ6 as seed ortholog is 91%.

Group of orthologs #339. Best score 394 bits
Score difference with first non-orthologous sequence - L.chalumnae:394 S.stipitis:394

H3A4P7              	100.00%		A3LWI4              	100.00%
Bootstrap support for H3A4P7 as seed ortholog is 100%.
Bootstrap support for A3LWI4 as seed ortholog is 100%.

Group of orthologs #340. Best score 394 bits
Score difference with first non-orthologous sequence - L.chalumnae:394 S.stipitis:394

H3AQE4              	100.00%		A3LUD5              	100.00%
Bootstrap support for H3AQE4 as seed ortholog is 100%.
Bootstrap support for A3LUD5 as seed ortholog is 100%.

Group of orthologs #341. Best score 394 bits
Score difference with first non-orthologous sequence - L.chalumnae:164 S.stipitis:394

H3BA46              	100.00%		A3LU44              	100.00%
Bootstrap support for H3BA46 as seed ortholog is 99%.
Bootstrap support for A3LU44 as seed ortholog is 100%.

Group of orthologs #342. Best score 393 bits
Score difference with first non-orthologous sequence - L.chalumnae:303 S.stipitis:393

H3A8T1              	100.00%		A3GFK8              	100.00%
H3BFX4              	38.85%		
Bootstrap support for H3A8T1 as seed ortholog is 100%.
Bootstrap support for A3GFK8 as seed ortholog is 100%.

Group of orthologs #343. Best score 392 bits
Score difference with first non-orthologous sequence - L.chalumnae:392 S.stipitis:392

H3BHF1              	100.00%		A3GFH8              	100.00%
H3BFA5              	24.12%		
H3AEE9              	20.06%		
Bootstrap support for H3BHF1 as seed ortholog is 100%.
Bootstrap support for A3GFH8 as seed ortholog is 100%.

Group of orthologs #344. Best score 392 bits
Score difference with first non-orthologous sequence - L.chalumnae:205 S.stipitis:47

H3AGW5              	100.00%		A3LVI4              	100.00%
H3A4Z0              	38.68%		
Bootstrap support for H3AGW5 as seed ortholog is 100%.
Bootstrap support for A3LVI4 as seed ortholog is 68%.
Alternative seed ortholog is A3LPL1 (47 bits away from this cluster)

Group of orthologs #345. Best score 392 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 S.stipitis:392

H3ADI2              	100.00%		A3GFN6              	100.00%
Bootstrap support for H3ADI2 as seed ortholog is 100%.
Bootstrap support for A3GFN6 as seed ortholog is 100%.

Group of orthologs #346. Best score 392 bits
Score difference with first non-orthologous sequence - L.chalumnae:392 S.stipitis:392

H3B715              	100.00%		A3GGK9              	100.00%
Bootstrap support for H3B715 as seed ortholog is 100%.
Bootstrap support for A3GGK9 as seed ortholog is 100%.

Group of orthologs #347. Best score 391 bits
Score difference with first non-orthologous sequence - L.chalumnae:391 S.stipitis:391

H3B9L1              	100.00%		A3LV82              	100.00%
Bootstrap support for H3B9L1 as seed ortholog is 100%.
Bootstrap support for A3LV82 as seed ortholog is 100%.

Group of orthologs #348. Best score 390 bits
Score difference with first non-orthologous sequence - L.chalumnae:286 S.stipitis:390

M3XKJ9              	100.00%		A3LNF2              	100.00%
Bootstrap support for M3XKJ9 as seed ortholog is 100%.
Bootstrap support for A3LNF2 as seed ortholog is 100%.

Group of orthologs #349. Best score 389 bits
Score difference with first non-orthologous sequence - L.chalumnae:389 S.stipitis:389

H3AW53              	100.00%		A3LPY6              	100.00%
Bootstrap support for H3AW53 as seed ortholog is 100%.
Bootstrap support for A3LPY6 as seed ortholog is 100%.

Group of orthologs #350. Best score 388 bits
Score difference with first non-orthologous sequence - L.chalumnae:197 S.stipitis:388

H3B343              	100.00%		A3LV77              	100.00%
H3BHN0              	46.04%		
Bootstrap support for H3B343 as seed ortholog is 100%.
Bootstrap support for A3LV77 as seed ortholog is 100%.

Group of orthologs #351. Best score 388 bits
Score difference with first non-orthologous sequence - L.chalumnae:190 S.stipitis:388

H3ARB4              	100.00%		A3GFA4              	100.00%
Bootstrap support for H3ARB4 as seed ortholog is 100%.
Bootstrap support for A3GFA4 as seed ortholog is 100%.

Group of orthologs #352. Best score 388 bits
Score difference with first non-orthologous sequence - L.chalumnae:388 S.stipitis:388

H3BGZ0              	100.00%		A3GID9              	100.00%
Bootstrap support for H3BGZ0 as seed ortholog is 100%.
Bootstrap support for A3GID9 as seed ortholog is 100%.

Group of orthologs #353. Best score 387 bits
Score difference with first non-orthologous sequence - L.chalumnae:387 S.stipitis:387

H3ATL4              	100.00%		A3LP17              	100.00%
H2ZVD5              	57.69%		
Bootstrap support for H3ATL4 as seed ortholog is 100%.
Bootstrap support for A3LP17 as seed ortholog is 100%.

Group of orthologs #354. Best score 387 bits
Score difference with first non-orthologous sequence - L.chalumnae:387 S.stipitis:387

H3ASP8              	100.00%		A3LUH7              	100.00%
Bootstrap support for H3ASP8 as seed ortholog is 100%.
Bootstrap support for A3LUH7 as seed ortholog is 100%.

Group of orthologs #355. Best score 386 bits
Score difference with first non-orthologous sequence - L.chalumnae:386 S.stipitis:386

H3AF45              	100.00%		A3LSB9              	100.00%
H3AAL4              	41.94%		A3LU18              	6.82%
Bootstrap support for H3AF45 as seed ortholog is 100%.
Bootstrap support for A3LSB9 as seed ortholog is 100%.

Group of orthologs #356. Best score 386 bits
Score difference with first non-orthologous sequence - L.chalumnae:386 S.stipitis:386

H2ZWC7              	100.00%		A3LWS6              	100.00%
H3BDM8              	42.07%		
Bootstrap support for H2ZWC7 as seed ortholog is 100%.
Bootstrap support for A3LWS6 as seed ortholog is 100%.

Group of orthologs #357. Best score 386 bits
Score difference with first non-orthologous sequence - L.chalumnae:386 S.stipitis:386

H3A050              	100.00%		A3LTA9              	100.00%
Bootstrap support for H3A050 as seed ortholog is 100%.
Bootstrap support for A3LTA9 as seed ortholog is 100%.

Group of orthologs #358. Best score 385 bits
Score difference with first non-orthologous sequence - L.chalumnae:385 S.stipitis:111

H3AEX7              	100.00%		A3GG17              	100.00%
Bootstrap support for H3AEX7 as seed ortholog is 100%.
Bootstrap support for A3GG17 as seed ortholog is 99%.

Group of orthologs #359. Best score 384 bits
Score difference with first non-orthologous sequence - L.chalumnae:209 S.stipitis:262

H3BH10              	100.00%		A3GH91              	100.00%
H3BDW2              	14.77%		
Bootstrap support for H3BH10 as seed ortholog is 100%.
Bootstrap support for A3GH91 as seed ortholog is 100%.

Group of orthologs #360. Best score 381 bits
Score difference with first non-orthologous sequence - L.chalumnae:285 S.stipitis:381

H2ZTG7              	100.00%		A3LVQ0              	100.00%
Bootstrap support for H2ZTG7 as seed ortholog is 100%.
Bootstrap support for A3LVQ0 as seed ortholog is 100%.

Group of orthologs #361. Best score 381 bits
Score difference with first non-orthologous sequence - L.chalumnae:242 S.stipitis:381

H3ARG3              	100.00%		A3GEX9              	100.00%
Bootstrap support for H3ARG3 as seed ortholog is 100%.
Bootstrap support for A3GEX9 as seed ortholog is 100%.

Group of orthologs #362. Best score 381 bits
Score difference with first non-orthologous sequence - L.chalumnae:381 S.stipitis:381

H3BG71              	100.00%		A3GGB3              	100.00%
Bootstrap support for H3BG71 as seed ortholog is 100%.
Bootstrap support for A3GGB3 as seed ortholog is 100%.

Group of orthologs #363. Best score 381 bits
Score difference with first non-orthologous sequence - L.chalumnae:255 S.stipitis:340

H3B5L5              	100.00%		A3LWH7              	100.00%
Bootstrap support for H3B5L5 as seed ortholog is 100%.
Bootstrap support for A3LWH7 as seed ortholog is 100%.

Group of orthologs #364. Best score 380 bits
Score difference with first non-orthologous sequence - L.chalumnae:164 S.stipitis:171

H3AX40              	100.00%		A3GHW9              	100.00%
Bootstrap support for H3AX40 as seed ortholog is 99%.
Bootstrap support for A3GHW9 as seed ortholog is 99%.

Group of orthologs #365. Best score 379 bits
Score difference with first non-orthologous sequence - L.chalumnae:379 S.stipitis:379

H3BH88              	100.00%		A3LYR4              	100.00%
Bootstrap support for H3BH88 as seed ortholog is 100%.
Bootstrap support for A3LYR4 as seed ortholog is 100%.

Group of orthologs #366. Best score 376 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 S.stipitis:172

H3BAW4              	100.00%		A3GGG1              	100.00%
Bootstrap support for H3BAW4 as seed ortholog is 93%.
Bootstrap support for A3GGG1 as seed ortholog is 99%.

Group of orthologs #367. Best score 375 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 S.stipitis:100

H2ZZ30              	100.00%		A3M086              	100.00%
H3A9R8              	5.76%		
Bootstrap support for H2ZZ30 as seed ortholog is 96%.
Bootstrap support for A3M086 as seed ortholog is 99%.

Group of orthologs #368. Best score 375 bits
Score difference with first non-orthologous sequence - L.chalumnae:308 S.stipitis:375

H3B2B2              	100.00%		A3LSE0              	100.00%
Bootstrap support for H3B2B2 as seed ortholog is 100%.
Bootstrap support for A3LSE0 as seed ortholog is 100%.

Group of orthologs #369. Best score 374 bits
Score difference with first non-orthologous sequence - L.chalumnae:374 S.stipitis:374

H3AAK0              	100.00%		A3LW59              	100.00%
Bootstrap support for H3AAK0 as seed ortholog is 100%.
Bootstrap support for A3LW59 as seed ortholog is 100%.

Group of orthologs #370. Best score 373 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 S.stipitis:53

H3B1U6              	100.00%		A3GF15              	100.00%
H2ZVH9              	58.12%		A3LY05              	8.52%
Bootstrap support for H3B1U6 as seed ortholog is 99%.
Bootstrap support for A3GF15 as seed ortholog is 90%.

Group of orthologs #371. Best score 371 bits
Score difference with first non-orthologous sequence - L.chalumnae:371 S.stipitis:371

H3AGE6              	100.00%		A3LNS6              	100.00%
Bootstrap support for H3AGE6 as seed ortholog is 100%.
Bootstrap support for A3LNS6 as seed ortholog is 100%.

Group of orthologs #372. Best score 371 bits
Score difference with first non-orthologous sequence - L.chalumnae:371 S.stipitis:371

M3XI82              	100.00%		A3LWW5              	100.00%
Bootstrap support for M3XI82 as seed ortholog is 100%.
Bootstrap support for A3LWW5 as seed ortholog is 100%.

Group of orthologs #373. Best score 370 bits
Score difference with first non-orthologous sequence - L.chalumnae:370 S.stipitis:370

H3B8N1              	100.00%		A3LWV1              	100.00%
H3ATY0              	47.47%		
Bootstrap support for H3B8N1 as seed ortholog is 100%.
Bootstrap support for A3LWV1 as seed ortholog is 100%.

Group of orthologs #374. Best score 370 bits
Score difference with first non-orthologous sequence - L.chalumnae:370 S.stipitis:370

H3A516              	100.00%		A3LWP3              	100.00%
Bootstrap support for H3A516 as seed ortholog is 100%.
Bootstrap support for A3LWP3 as seed ortholog is 100%.

Group of orthologs #375. Best score 370 bits
Score difference with first non-orthologous sequence - L.chalumnae:235 S.stipitis:370

H3BI08              	100.00%		A3LYY4              	100.00%
Bootstrap support for H3BI08 as seed ortholog is 100%.
Bootstrap support for A3LYY4 as seed ortholog is 100%.

Group of orthologs #376. Best score 369 bits
Score difference with first non-orthologous sequence - L.chalumnae:369 S.stipitis:369

H3APX4              	100.00%		A3LTN8              	100.00%
Bootstrap support for H3APX4 as seed ortholog is 100%.
Bootstrap support for A3LTN8 as seed ortholog is 100%.

Group of orthologs #377. Best score 369 bits
Score difference with first non-orthologous sequence - L.chalumnae:369 S.stipitis:369

H3BAA1              	100.00%		A3M0D0              	100.00%
Bootstrap support for H3BAA1 as seed ortholog is 100%.
Bootstrap support for A3M0D0 as seed ortholog is 100%.

Group of orthologs #378. Best score 368 bits
Score difference with first non-orthologous sequence - L.chalumnae:368 S.stipitis:368

H3A0A5              	100.00%		A3LNJ9              	100.00%
Bootstrap support for H3A0A5 as seed ortholog is 100%.
Bootstrap support for A3LNJ9 as seed ortholog is 100%.

Group of orthologs #379. Best score 367 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 S.stipitis:150

H2ZZA6              	100.00%		A3LUB4              	100.00%
                    	       		A3LPT7              	29.36%
Bootstrap support for H2ZZA6 as seed ortholog is 99%.
Bootstrap support for A3LUB4 as seed ortholog is 99%.

Group of orthologs #380. Best score 367 bits
Score difference with first non-orthologous sequence - L.chalumnae:367 S.stipitis:367

H3AT53              	100.00%		A3GGX7              	100.00%
Bootstrap support for H3AT53 as seed ortholog is 100%.
Bootstrap support for A3GGX7 as seed ortholog is 100%.

Group of orthologs #381. Best score 366 bits
Score difference with first non-orthologous sequence - L.chalumnae:366 S.stipitis:366

H2ZYS3              	100.00%		A3GGB7              	100.00%
H3A6P8              	52.58%		
Bootstrap support for H2ZYS3 as seed ortholog is 100%.
Bootstrap support for A3GGB7 as seed ortholog is 100%.

Group of orthologs #382. Best score 366 bits
Score difference with first non-orthologous sequence - L.chalumnae:100 S.stipitis:53

H2ZWK3              	100.00%		A3LN91              	100.00%
H3B7L5              	50.00%		
Bootstrap support for H2ZWK3 as seed ortholog is 99%.
Bootstrap support for A3LN91 as seed ortholog is 91%.

Group of orthologs #383. Best score 366 bits
Score difference with first non-orthologous sequence - L.chalumnae:366 S.stipitis:366

H2ZXG4              	100.00%		A3LZS7              	100.00%
Bootstrap support for H2ZXG4 as seed ortholog is 100%.
Bootstrap support for A3LZS7 as seed ortholog is 100%.

Group of orthologs #384. Best score 366 bits
Score difference with first non-orthologous sequence - L.chalumnae:366 S.stipitis:366

H3B8R6              	100.00%		A3M027              	100.00%
Bootstrap support for H3B8R6 as seed ortholog is 100%.
Bootstrap support for A3M027 as seed ortholog is 100%.

Group of orthologs #385. Best score 366 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 S.stipitis:366

H3BCL8              	100.00%		A3LX59              	100.00%
Bootstrap support for H3BCL8 as seed ortholog is 97%.
Bootstrap support for A3LX59 as seed ortholog is 100%.

Group of orthologs #386. Best score 365 bits
Score difference with first non-orthologous sequence - L.chalumnae:285 S.stipitis:239

H3AH80              	100.00%		A3GGG5              	100.00%
Bootstrap support for H3AH80 as seed ortholog is 100%.
Bootstrap support for A3GGG5 as seed ortholog is 99%.

Group of orthologs #387. Best score 364 bits
Score difference with first non-orthologous sequence - L.chalumnae:364 S.stipitis:364

H3AMV4              	100.00%		A3LT23              	100.00%
Bootstrap support for H3AMV4 as seed ortholog is 100%.
Bootstrap support for A3LT23 as seed ortholog is 100%.

Group of orthologs #388. Best score 364 bits
Score difference with first non-orthologous sequence - L.chalumnae:41 S.stipitis:364

H3AZX5              	100.00%		A3LP98              	100.00%
Bootstrap support for H3AZX5 as seed ortholog is 93%.
Bootstrap support for A3LP98 as seed ortholog is 100%.

Group of orthologs #389. Best score 363 bits
Score difference with first non-orthologous sequence - L.chalumnae:363 S.stipitis:363

H3B421              	100.00%		A3GFK2              	100.00%
Bootstrap support for H3B421 as seed ortholog is 100%.
Bootstrap support for A3GFK2 as seed ortholog is 100%.

Group of orthologs #390. Best score 361 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 S.stipitis:228

H2ZWY2              	100.00%		A3LU23              	100.00%
Bootstrap support for H2ZWY2 as seed ortholog is 91%.
Bootstrap support for A3LU23 as seed ortholog is 100%.

Group of orthologs #391. Best score 360 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 S.stipitis:360

H3AW75              	100.00%		A3LTS9              	100.00%
H3B5G8              	56.16%		A3LPX9              	27.07%
Bootstrap support for H3AW75 as seed ortholog is 99%.
Bootstrap support for A3LTS9 as seed ortholog is 100%.

Group of orthologs #392. Best score 360 bits
Score difference with first non-orthologous sequence - L.chalumnae:360 S.stipitis:110

H2ZZ12              	100.00%		A3LSH7              	100.00%
Bootstrap support for H2ZZ12 as seed ortholog is 100%.
Bootstrap support for A3LSH7 as seed ortholog is 99%.

Group of orthologs #393. Best score 359 bits
Score difference with first non-orthologous sequence - L.chalumnae:117 S.stipitis:159

H3A7L7              	100.00%		A3LNB3              	100.00%
Bootstrap support for H3A7L7 as seed ortholog is 99%.
Bootstrap support for A3LNB3 as seed ortholog is 99%.

Group of orthologs #394. Best score 359 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 S.stipitis:359

H3ADW2              	100.00%		A3LU60              	100.00%
Bootstrap support for H3ADW2 as seed ortholog is 97%.
Bootstrap support for A3LU60 as seed ortholog is 100%.

Group of orthologs #395. Best score 358 bits
Score difference with first non-orthologous sequence - L.chalumnae:244 S.stipitis:358

M3XHM2              	100.00%		A3LWT7              	100.00%
Bootstrap support for M3XHM2 as seed ortholog is 100%.
Bootstrap support for A3LWT7 as seed ortholog is 100%.

Group of orthologs #396. Best score 357 bits
Score difference with first non-orthologous sequence - L.chalumnae:357 S.stipitis:357

H3ARW1              	100.00%		A3LZA5              	100.00%
H3B1S4              	60.44%		
Bootstrap support for H3ARW1 as seed ortholog is 100%.
Bootstrap support for A3LZA5 as seed ortholog is 100%.

Group of orthologs #397. Best score 357 bits
Score difference with first non-orthologous sequence - L.chalumnae:166 S.stipitis:357

H2ZWW5              	100.00%		A3LQP9              	100.00%
Bootstrap support for H2ZWW5 as seed ortholog is 99%.
Bootstrap support for A3LQP9 as seed ortholog is 100%.

Group of orthologs #398. Best score 356 bits
Score difference with first non-orthologous sequence - L.chalumnae:356 S.stipitis:356

H3AVP2              	100.00%		A3LQE7              	100.00%
Bootstrap support for H3AVP2 as seed ortholog is 100%.
Bootstrap support for A3LQE7 as seed ortholog is 100%.

Group of orthologs #399. Best score 354 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 S.stipitis:135

H3ADK9              	100.00%		A3LYD5              	100.00%
H3AXE1              	83.06%		A3LPK9              	43.03%
Bootstrap support for H3ADK9 as seed ortholog is 99%.
Bootstrap support for A3LYD5 as seed ortholog is 99%.

Group of orthologs #400. Best score 354 bits
Score difference with first non-orthologous sequence - L.chalumnae:354 S.stipitis:354

H3A2L8              	100.00%		A3LP44              	100.00%
Bootstrap support for H3A2L8 as seed ortholog is 100%.
Bootstrap support for A3LP44 as seed ortholog is 100%.

Group of orthologs #401. Best score 354 bits
Score difference with first non-orthologous sequence - L.chalumnae:354 S.stipitis:354

H3ABU7              	100.00%		A3LYL4              	100.00%
Bootstrap support for H3ABU7 as seed ortholog is 100%.
Bootstrap support for A3LYL4 as seed ortholog is 100%.

Group of orthologs #402. Best score 353 bits
Score difference with first non-orthologous sequence - L.chalumnae:196 S.stipitis:43

H3B895              	100.00%		A3LZQ3              	100.00%
Bootstrap support for H3B895 as seed ortholog is 100%.
Bootstrap support for A3LZQ3 as seed ortholog is 86%.

Group of orthologs #403. Best score 351 bits
Score difference with first non-orthologous sequence - L.chalumnae:216 S.stipitis:259

H3A4R9              	100.00%		A3LX94              	100.00%
H3AQ93              	13.93%		
H3A2R9              	10.19%		
Bootstrap support for H3A4R9 as seed ortholog is 100%.
Bootstrap support for A3LX94 as seed ortholog is 100%.

Group of orthologs #404. Best score 349 bits
Score difference with first non-orthologous sequence - L.chalumnae:174 S.stipitis:156

H3AB20              	100.00%		A3GG51              	100.00%
Bootstrap support for H3AB20 as seed ortholog is 99%.
Bootstrap support for A3GG51 as seed ortholog is 99%.

Group of orthologs #405. Best score 349 bits
Score difference with first non-orthologous sequence - L.chalumnae:349 S.stipitis:349

H3AFQ6              	100.00%		A3LXV1              	100.00%
Bootstrap support for H3AFQ6 as seed ortholog is 100%.
Bootstrap support for A3LXV1 as seed ortholog is 100%.

Group of orthologs #406. Best score 349 bits
Score difference with first non-orthologous sequence - L.chalumnae:349 S.stipitis:349

H3B4E4              	100.00%		A3LRF1              	100.00%
Bootstrap support for H3B4E4 as seed ortholog is 100%.
Bootstrap support for A3LRF1 as seed ortholog is 100%.

Group of orthologs #407. Best score 348 bits
Score difference with first non-orthologous sequence - L.chalumnae:348 S.stipitis:348

H3AYH0              	100.00%		A3GHJ3              	100.00%
Bootstrap support for H3AYH0 as seed ortholog is 100%.
Bootstrap support for A3GHJ3 as seed ortholog is 100%.

Group of orthologs #408. Best score 347 bits
Score difference with first non-orthologous sequence - L.chalumnae:347 S.stipitis:347

H3AXR7              	100.00%		A3LN62              	100.00%
H3AYG2              	34.86%		
H3B8C2              	28.99%		
Bootstrap support for H3AXR7 as seed ortholog is 100%.
Bootstrap support for A3LN62 as seed ortholog is 100%.

Group of orthologs #409. Best score 347 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 S.stipitis:347

H3BB08              	100.00%		A3LPR5              	100.00%
H3A5E0              	35.75%		
Bootstrap support for H3BB08 as seed ortholog is 93%.
Bootstrap support for A3LPR5 as seed ortholog is 100%.

Group of orthologs #410. Best score 346 bits
Score difference with first non-orthologous sequence - L.chalumnae:199 S.stipitis:346

H3A560              	100.00%		A3GHA0              	100.00%
Bootstrap support for H3A560 as seed ortholog is 100%.
Bootstrap support for A3GHA0 as seed ortholog is 100%.

Group of orthologs #411. Best score 346 bits
Score difference with first non-orthologous sequence - L.chalumnae:346 S.stipitis:346

H3BDT3              	100.00%		A3LSA9              	100.00%
Bootstrap support for H3BDT3 as seed ortholog is 100%.
Bootstrap support for A3LSA9 as seed ortholog is 100%.

Group of orthologs #412. Best score 345 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 S.stipitis:222

H3A2T5              	100.00%		A3LU10              	100.00%
Bootstrap support for H3A2T5 as seed ortholog is 98%.
Bootstrap support for A3LU10 as seed ortholog is 100%.

Group of orthologs #413. Best score 344 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 S.stipitis:344

H2ZWI0              	100.00%		A3M056              	100.00%
Bootstrap support for H2ZWI0 as seed ortholog is 99%.
Bootstrap support for A3M056 as seed ortholog is 100%.

Group of orthologs #414. Best score 343 bits
Score difference with first non-orthologous sequence - L.chalumnae:343 S.stipitis:343

H3A0R1              	100.00%		A3LSU9              	100.00%
H2ZS79              	66.85%		
Bootstrap support for H3A0R1 as seed ortholog is 100%.
Bootstrap support for A3LSU9 as seed ortholog is 100%.

Group of orthologs #415. Best score 343 bits
Score difference with first non-orthologous sequence - L.chalumnae:343 S.stipitis:343

H3B819              	100.00%		A3LZU4              	100.00%
Bootstrap support for H3B819 as seed ortholog is 100%.
Bootstrap support for A3LZU4 as seed ortholog is 100%.

Group of orthologs #416. Best score 342 bits
Score difference with first non-orthologous sequence - L.chalumnae:342 S.stipitis:342

H3AKW1              	100.00%		A3LV50              	100.00%
H3AMT7              	19.71%		
Bootstrap support for H3AKW1 as seed ortholog is 100%.
Bootstrap support for A3LV50 as seed ortholog is 100%.

Group of orthologs #417. Best score 342 bits
Score difference with first non-orthologous sequence - L.chalumnae:342 S.stipitis:342

H2ZRP6              	100.00%		A3GF58              	100.00%
Bootstrap support for H2ZRP6 as seed ortholog is 100%.
Bootstrap support for A3GF58 as seed ortholog is 100%.

Group of orthologs #418. Best score 342 bits
Score difference with first non-orthologous sequence - L.chalumnae:342 S.stipitis:136

H2ZWA6              	100.00%		A3LRR6              	100.00%
Bootstrap support for H2ZWA6 as seed ortholog is 100%.
Bootstrap support for A3LRR6 as seed ortholog is 96%.

Group of orthologs #419. Best score 342 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 S.stipitis:132

H3B0G7              	100.00%		A3LXT8              	100.00%
Bootstrap support for H3B0G7 as seed ortholog is 97%.
Bootstrap support for A3LXT8 as seed ortholog is 99%.

Group of orthologs #420. Best score 342 bits
Score difference with first non-orthologous sequence - L.chalumnae:342 S.stipitis:342

H3BGD3              	100.00%		A3LWF9              	100.00%
Bootstrap support for H3BGD3 as seed ortholog is 100%.
Bootstrap support for A3LWF9 as seed ortholog is 100%.

Group of orthologs #421. Best score 341 bits
Score difference with first non-orthologous sequence - L.chalumnae:341 S.stipitis:341

H2ZWN8              	100.00%		A3GEZ0              	100.00%
Bootstrap support for H2ZWN8 as seed ortholog is 100%.
Bootstrap support for A3GEZ0 as seed ortholog is 100%.

Group of orthologs #422. Best score 339 bits
Score difference with first non-orthologous sequence - L.chalumnae:30 S.stipitis:156

H3AFA1              	100.00%		A3LYS8              	100.00%
H3AHE6              	25.76%		
Bootstrap support for H3AFA1 as seed ortholog is 82%.
Bootstrap support for A3LYS8 as seed ortholog is 99%.

Group of orthologs #423. Best score 339 bits
Score difference with first non-orthologous sequence - L.chalumnae:339 S.stipitis:339

H3BFG9              	100.00%		A3LZ97              	100.00%
H3AMH0              	33.33%		
Bootstrap support for H3BFG9 as seed ortholog is 100%.
Bootstrap support for A3LZ97 as seed ortholog is 100%.

Group of orthologs #424. Best score 339 bits
Score difference with first non-orthologous sequence - L.chalumnae:339 S.stipitis:339

H3A3A1              	100.00%		A3GH62              	100.00%
Bootstrap support for H3A3A1 as seed ortholog is 100%.
Bootstrap support for A3GH62 as seed ortholog is 100%.

Group of orthologs #425. Best score 339 bits
Score difference with first non-orthologous sequence - L.chalumnae:339 S.stipitis:339

H3BD20              	100.00%		A3LP78              	100.00%
Bootstrap support for H3BD20 as seed ortholog is 100%.
Bootstrap support for A3LP78 as seed ortholog is 100%.

Group of orthologs #426. Best score 338 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 S.stipitis:338

H2ZTY4              	100.00%		A3LR29              	100.00%
Bootstrap support for H2ZTY4 as seed ortholog is 83%.
Bootstrap support for A3LR29 as seed ortholog is 100%.

Group of orthologs #427. Best score 338 bits
Score difference with first non-orthologous sequence - L.chalumnae:338 S.stipitis:338

H3AJK3              	100.00%		A3LN55              	100.00%
Bootstrap support for H3AJK3 as seed ortholog is 100%.
Bootstrap support for A3LN55 as seed ortholog is 100%.

Group of orthologs #428. Best score 338 bits
Score difference with first non-orthologous sequence - L.chalumnae:258 S.stipitis:338

H3AEM3              	100.00%		A3LYM1              	100.00%
Bootstrap support for H3AEM3 as seed ortholog is 100%.
Bootstrap support for A3LYM1 as seed ortholog is 100%.

Group of orthologs #429. Best score 337 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 S.stipitis:337

H3AI90              	100.00%		A3LPQ3              	100.00%
H3A406              	66.80%		
H3BGB6              	55.76%		
Bootstrap support for H3AI90 as seed ortholog is 93%.
Bootstrap support for A3LPQ3 as seed ortholog is 100%.

Group of orthologs #430. Best score 337 bits
Score difference with first non-orthologous sequence - L.chalumnae:337 S.stipitis:337

H3BB88              	100.00%		A3LVU4              	100.00%
H2ZY28              	100.00%		A3LNY1              	100.00%
Bootstrap support for H3BB88 as seed ortholog is 100%.
Bootstrap support for H2ZY28 as seed ortholog is 100%.
Bootstrap support for A3LVU4 as seed ortholog is 100%.
Bootstrap support for A3LNY1 as seed ortholog is 100%.

Group of orthologs #431. Best score 336 bits
Score difference with first non-orthologous sequence - L.chalumnae:141 S.stipitis:336

H3ASW1              	100.00%		A3LYN5              	100.00%
H2ZZ89              	45.28%		
Bootstrap support for H3ASW1 as seed ortholog is 99%.
Bootstrap support for A3LYN5 as seed ortholog is 100%.

Group of orthologs #432. Best score 336 bits
Score difference with first non-orthologous sequence - L.chalumnae:336 S.stipitis:336

H2ZTY7              	100.00%		A3GGB4              	100.00%
Bootstrap support for H2ZTY7 as seed ortholog is 100%.
Bootstrap support for A3GGB4 as seed ortholog is 100%.

Group of orthologs #433. Best score 334 bits
Score difference with first non-orthologous sequence - L.chalumnae:334 S.stipitis:334

H3AD44              	100.00%		A3GI26              	100.00%
H3A5R2              	70.25%		
Bootstrap support for H3AD44 as seed ortholog is 100%.
Bootstrap support for A3GI26 as seed ortholog is 100%.

Group of orthologs #434. Best score 334 bits
Score difference with first non-orthologous sequence - L.chalumnae:205 S.stipitis:334

H2ZZN1              	100.00%		A3LQV2              	100.00%
Bootstrap support for H2ZZN1 as seed ortholog is 99%.
Bootstrap support for A3LQV2 as seed ortholog is 100%.

Group of orthologs #435. Best score 333 bits
Score difference with first non-orthologous sequence - L.chalumnae:333 S.stipitis:333

H2ZS88              	100.00%		A3GGN7              	100.00%
Bootstrap support for H2ZS88 as seed ortholog is 100%.
Bootstrap support for A3GGN7 as seed ortholog is 100%.

Group of orthologs #436. Best score 332 bits
Score difference with first non-orthologous sequence - L.chalumnae:157 S.stipitis:160

H3AI73              	100.00%		A3LP87              	100.00%
Bootstrap support for H3AI73 as seed ortholog is 99%.
Bootstrap support for A3LP87 as seed ortholog is 99%.

Group of orthologs #437. Best score 332 bits
Score difference with first non-orthologous sequence - L.chalumnae:332 S.stipitis:332

H3B3Q4              	100.00%		A3GEZ8              	100.00%
Bootstrap support for H3B3Q4 as seed ortholog is 100%.
Bootstrap support for A3GEZ8 as seed ortholog is 100%.

Group of orthologs #438. Best score 332 bits
Score difference with first non-orthologous sequence - L.chalumnae:332 S.stipitis:332

H3BAS9              	100.00%		A3LN97              	100.00%
Bootstrap support for H3BAS9 as seed ortholog is 100%.
Bootstrap support for A3LN97 as seed ortholog is 100%.

Group of orthologs #439. Best score 330 bits
Score difference with first non-orthologous sequence - L.chalumnae:330 S.stipitis:330

H3BEK4              	100.00%		A3LYU6              	100.00%
H3BI26              	44.61%		
Bootstrap support for H3BEK4 as seed ortholog is 100%.
Bootstrap support for A3LYU6 as seed ortholog is 100%.

Group of orthologs #440. Best score 330 bits
Score difference with first non-orthologous sequence - L.chalumnae:330 S.stipitis:330

H3AP13              	100.00%		A3LQH4              	100.00%
Bootstrap support for H3AP13 as seed ortholog is 100%.
Bootstrap support for A3LQH4 as seed ortholog is 100%.

Group of orthologs #441. Best score 329 bits
Score difference with first non-orthologous sequence - L.chalumnae:329 S.stipitis:329

H3ARI0              	100.00%		A3LW87              	100.00%
Bootstrap support for H3ARI0 as seed ortholog is 100%.
Bootstrap support for A3LW87 as seed ortholog is 100%.

Group of orthologs #442. Best score 327 bits
Score difference with first non-orthologous sequence - L.chalumnae:154 S.stipitis:136

M3XKL9              	100.00%		A3M0M1              	100.00%
H3BEY4              	13.43%		
Bootstrap support for M3XKL9 as seed ortholog is 99%.
Bootstrap support for A3M0M1 as seed ortholog is 98%.

Group of orthologs #443. Best score 327 bits
Score difference with first non-orthologous sequence - L.chalumnae:327 S.stipitis:327

H2ZYJ0              	100.00%		A3LSG3              	100.00%
Bootstrap support for H2ZYJ0 as seed ortholog is 100%.
Bootstrap support for A3LSG3 as seed ortholog is 100%.

Group of orthologs #444. Best score 326 bits
Score difference with first non-orthologous sequence - L.chalumnae:326 S.stipitis:326

H3A547              	100.00%		A3LQ06              	100.00%
Bootstrap support for H3A547 as seed ortholog is 100%.
Bootstrap support for A3LQ06 as seed ortholog is 100%.

Group of orthologs #445. Best score 326 bits
Score difference with first non-orthologous sequence - L.chalumnae:326 S.stipitis:326

H3AL64              	100.00%		A3LR90              	100.00%
Bootstrap support for H3AL64 as seed ortholog is 100%.
Bootstrap support for A3LR90 as seed ortholog is 100%.

Group of orthologs #446. Best score 325 bits
Score difference with first non-orthologous sequence - L.chalumnae:266 S.stipitis:40

H3BGU9              	100.00%		A3GGD9              	100.00%
Bootstrap support for H3BGU9 as seed ortholog is 100%.
Bootstrap support for A3GGD9 as seed ortholog is 87%.

Group of orthologs #447. Best score 325 bits
Score difference with first non-orthologous sequence - L.chalumnae:325 S.stipitis:325

H3BHA3              	100.00%		A3LRV8              	100.00%
Bootstrap support for H3BHA3 as seed ortholog is 100%.
Bootstrap support for A3LRV8 as seed ortholog is 100%.

Group of orthologs #448. Best score 325 bits
Score difference with first non-orthologous sequence - L.chalumnae:175 S.stipitis:66

H3BBW4              	100.00%		A3LX02              	100.00%
Bootstrap support for H3BBW4 as seed ortholog is 99%.
Bootstrap support for A3LX02 as seed ortholog is 94%.

Group of orthologs #449. Best score 324 bits
Score difference with first non-orthologous sequence - L.chalumnae:324 S.stipitis:324

H3BEI1              	100.00%		A3LWJ5              	100.00%
Bootstrap support for H3BEI1 as seed ortholog is 100%.
Bootstrap support for A3LWJ5 as seed ortholog is 100%.

Group of orthologs #450. Best score 323 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 S.stipitis:53

H3BDZ3              	100.00%		A3LQM3              	100.00%
H3ATU9              	76.49%		
H3AFI2              	72.35%		
H3BDS0              	41.34%		
H3ARH8              	34.88%		
H3BED5              	28.68%		
H3A6E3              	24.55%		
H3AYB1              	11.37%		
Bootstrap support for H3BDZ3 as seed ortholog is 98%.
Bootstrap support for A3LQM3 as seed ortholog is 88%.

Group of orthologs #451. Best score 323 bits
Score difference with first non-orthologous sequence - L.chalumnae:27 S.stipitis:107

H3ANL1              	100.00%		A3LYV6              	100.00%
H3BES7              	100.00%		A3LZR8              	100.00%
H3BIB4              	100.00%		
H3BIB3              	13.43%		
Bootstrap support for H3ANL1 as seed ortholog is 95%.
Bootstrap support for H3BES7 as seed ortholog is 90%.
Bootstrap support for H3BIB4 as seed ortholog is 89%.
Bootstrap support for A3LYV6 as seed ortholog is 100%.
Bootstrap support for A3LZR8 as seed ortholog is 100%.

Group of orthologs #452. Best score 323 bits
Score difference with first non-orthologous sequence - L.chalumnae:323 S.stipitis:235

H3AUY3              	100.00%		A3LXG1              	100.00%
Bootstrap support for H3AUY3 as seed ortholog is 100%.
Bootstrap support for A3LXG1 as seed ortholog is 100%.

Group of orthologs #453. Best score 322 bits
Score difference with first non-orthologous sequence - L.chalumnae:322 S.stipitis:322

H3BD09              	100.00%		A3LVQ3              	100.00%
H3B049              	28.67%		
Bootstrap support for H3BD09 as seed ortholog is 100%.
Bootstrap support for A3LVQ3 as seed ortholog is 100%.

Group of orthologs #454. Best score 322 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 S.stipitis:322

H3BHL8              	100.00%		A3LWR7              	100.00%
Bootstrap support for H3BHL8 as seed ortholog is 98%.
Bootstrap support for A3LWR7 as seed ortholog is 100%.

Group of orthologs #455. Best score 321 bits
Score difference with first non-orthologous sequence - L.chalumnae:321 S.stipitis:264

H3ACK3              	100.00%		A3LMT5              	100.00%
Bootstrap support for H3ACK3 as seed ortholog is 100%.
Bootstrap support for A3LMT5 as seed ortholog is 100%.

Group of orthologs #456. Best score 321 bits
Score difference with first non-orthologous sequence - L.chalumnae:321 S.stipitis:321

H3BA16              	100.00%		A3LT02              	100.00%
Bootstrap support for H3BA16 as seed ortholog is 100%.
Bootstrap support for A3LT02 as seed ortholog is 100%.

Group of orthologs #457. Best score 321 bits
Score difference with first non-orthologous sequence - L.chalumnae:321 S.stipitis:321

H3B495              	100.00%		A3M0G2              	100.00%
Bootstrap support for H3B495 as seed ortholog is 100%.
Bootstrap support for A3M0G2 as seed ortholog is 100%.

Group of orthologs #458. Best score 320 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 S.stipitis:196

H3B4K7              	100.00%		A3LX55              	100.00%
H3B382              	5.87%		
Bootstrap support for H3B4K7 as seed ortholog is 99%.
Bootstrap support for A3LX55 as seed ortholog is 99%.

Group of orthologs #459. Best score 319 bits
Score difference with first non-orthologous sequence - L.chalumnae:319 S.stipitis:319

H2ZRX1              	100.00%		A3LPT6              	100.00%
H2ZXP4              	11.57%		
H2ZSS8              	8.46%		
Bootstrap support for H2ZRX1 as seed ortholog is 100%.
Bootstrap support for A3LPT6 as seed ortholog is 100%.

Group of orthologs #460. Best score 319 bits
Score difference with first non-orthologous sequence - L.chalumnae:255 S.stipitis:319

H2ZYS5              	100.00%		A3GI57              	100.00%
Bootstrap support for H2ZYS5 as seed ortholog is 100%.
Bootstrap support for A3GI57 as seed ortholog is 100%.

Group of orthologs #461. Best score 317 bits
Score difference with first non-orthologous sequence - L.chalumnae:176 S.stipitis:317

H3ARP6              	100.00%		A3LZE8              	100.00%
H3AAB0              	62.68%		A3LPV7              	72.73%
H3AJJ4              	60.70%		A3LT24              	24.81%
H3AXU8              	48.63%		A3LPC6              	24.81%
                    	       		A3LVT4              	18.12%
Bootstrap support for H3ARP6 as seed ortholog is 99%.
Bootstrap support for A3LZE8 as seed ortholog is 100%.

Group of orthologs #462. Best score 317 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 S.stipitis:317

H3AZL8              	100.00%		A3LMT4              	100.00%
Bootstrap support for H3AZL8 as seed ortholog is 99%.
Bootstrap support for A3LMT4 as seed ortholog is 100%.

Group of orthologs #463. Best score 317 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 S.stipitis:134

H3ALG6              	100.00%		A3M055              	100.00%
Bootstrap support for H3ALG6 as seed ortholog is 99%.
Bootstrap support for A3M055 as seed ortholog is 99%.

Group of orthologs #464. Best score 316 bits
Score difference with first non-orthologous sequence - L.chalumnae:316 S.stipitis:316

H3B1E7              	100.00%		A3GI64              	100.00%
Bootstrap support for H3B1E7 as seed ortholog is 100%.
Bootstrap support for A3GI64 as seed ortholog is 100%.

Group of orthologs #465. Best score 316 bits
Score difference with first non-orthologous sequence - L.chalumnae:316 S.stipitis:316

H3B8L9              	100.00%		A3LTQ4              	100.00%
Bootstrap support for H3B8L9 as seed ortholog is 100%.
Bootstrap support for A3LTQ4 as seed ortholog is 100%.

Group of orthologs #466. Best score 314 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 S.stipitis:314

H3ASI3              	100.00%		A3LQI7              	100.00%
H3B6Q6              	32.81%		A3LRX6              	37.55%
Bootstrap support for H3ASI3 as seed ortholog is 86%.
Bootstrap support for A3LQI7 as seed ortholog is 100%.

Group of orthologs #467. Best score 314 bits
Score difference with first non-orthologous sequence - L.chalumnae:314 S.stipitis:314

H3ALS6              	100.00%		A3LQU3              	100.00%
H3AJY7              	31.83%		
Bootstrap support for H3ALS6 as seed ortholog is 100%.
Bootstrap support for A3LQU3 as seed ortholog is 100%.

Group of orthologs #468. Best score 314 bits
Score difference with first non-orthologous sequence - L.chalumnae:314 S.stipitis:61

H3BBH0              	100.00%		A3LTU4              	100.00%
H3ALH7              	10.19%		
Bootstrap support for H3BBH0 as seed ortholog is 100%.
Bootstrap support for A3LTU4 as seed ortholog is 96%.

Group of orthologs #469. Best score 314 bits
Score difference with first non-orthologous sequence - L.chalumnae:167 S.stipitis:202

H3B1E5              	100.00%		A3LVW0              	100.00%
Bootstrap support for H3B1E5 as seed ortholog is 99%.
Bootstrap support for A3LVW0 as seed ortholog is 99%.

Group of orthologs #470. Best score 313 bits
Score difference with first non-orthologous sequence - L.chalumnae:16 S.stipitis:46

M3XIJ9              	100.00%		A3LXE1              	100.00%
H2ZTT8              	36.69%		
M3XIR1              	7.97%		
H3B6Z1              	7.13%		
Bootstrap support for M3XIJ9 as seed ortholog is 78%.
Bootstrap support for A3LXE1 as seed ortholog is 88%.

Group of orthologs #471. Best score 313 bits
Score difference with first non-orthologous sequence - L.chalumnae:313 S.stipitis:313

H3A4X6              	100.00%		A3LSW5              	100.00%
H3BDP2              	58.66%		
Bootstrap support for H3A4X6 as seed ortholog is 100%.
Bootstrap support for A3LSW5 as seed ortholog is 100%.

Group of orthologs #472. Best score 313 bits
Score difference with first non-orthologous sequence - L.chalumnae:313 S.stipitis:313

H3AZF0              	100.00%		A3LRH9              	100.00%
Bootstrap support for H3AZF0 as seed ortholog is 100%.
Bootstrap support for A3LRH9 as seed ortholog is 100%.

Group of orthologs #473. Best score 313 bits
Score difference with first non-orthologous sequence - L.chalumnae:313 S.stipitis:313

H3ASL2              	100.00%		A3LZI8              	100.00%
Bootstrap support for H3ASL2 as seed ortholog is 100%.
Bootstrap support for A3LZI8 as seed ortholog is 100%.

Group of orthologs #474. Best score 312 bits
Score difference with first non-orthologous sequence - L.chalumnae:312 S.stipitis:312

H3AP34              	100.00%		A3GEU3              	100.00%
H3AR60              	53.07%		
Bootstrap support for H3AP34 as seed ortholog is 100%.
Bootstrap support for A3GEU3 as seed ortholog is 100%.

Group of orthologs #475. Best score 312 bits
Score difference with first non-orthologous sequence - L.chalumnae:236 S.stipitis:265

H3ARL5              	100.00%		A3LVD0              	100.00%
Bootstrap support for H3ARL5 as seed ortholog is 100%.
Bootstrap support for A3LVD0 as seed ortholog is 100%.

Group of orthologs #476. Best score 312 bits
Score difference with first non-orthologous sequence - L.chalumnae:312 S.stipitis:312

H3B9E7              	100.00%		A3GG41              	100.00%
Bootstrap support for H3B9E7 as seed ortholog is 100%.
Bootstrap support for A3GG41 as seed ortholog is 100%.

Group of orthologs #477. Best score 311 bits
Score difference with first non-orthologous sequence - L.chalumnae:311 S.stipitis:311

H2ZXM1              	100.00%		A3M095              	100.00%
Bootstrap support for H2ZXM1 as seed ortholog is 100%.
Bootstrap support for A3M095 as seed ortholog is 100%.

Group of orthologs #478. Best score 311 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 S.stipitis:311

H2ZZ69              	100.00%		A3LZR6              	100.00%
Bootstrap support for H2ZZ69 as seed ortholog is 82%.
Bootstrap support for A3LZR6 as seed ortholog is 100%.

Group of orthologs #479. Best score 311 bits
Score difference with first non-orthologous sequence - L.chalumnae:311 S.stipitis:311

H3AB41              	100.00%		A3LPV0              	100.00%
Bootstrap support for H3AB41 as seed ortholog is 100%.
Bootstrap support for A3LPV0 as seed ortholog is 100%.

Group of orthologs #480. Best score 310 bits
Score difference with first non-orthologous sequence - L.chalumnae:310 S.stipitis:310

H3ATD9              	100.00%		A3GFK3              	100.00%
H3BA90              	59.05%		
H3BDR9              	52.76%		
H3AD48              	40.24%		
H3ATC4              	25.14%		
H3AUU1              	23.49%		
H3A6R0              	20.67%		
H3AD80              	7.60%		
H3AMW3              	6.10%		
H3AH42              	5.13%		
Bootstrap support for H3ATD9 as seed ortholog is 100%.
Bootstrap support for A3GFK3 as seed ortholog is 100%.

Group of orthologs #481. Best score 310 bits
Score difference with first non-orthologous sequence - L.chalumnae:310 S.stipitis:310

H3ATR1              	100.00%		A3LYI9              	100.00%
H2ZZA0              	64.62%		A3LU81              	32.87%
H3B379              	48.46%		
Bootstrap support for H3ATR1 as seed ortholog is 100%.
Bootstrap support for A3LYI9 as seed ortholog is 100%.

Group of orthologs #482. Best score 310 bits
Score difference with first non-orthologous sequence - L.chalumnae:170 S.stipitis:310

H3AQC8              	100.00%		A3LTL9              	100.00%
Bootstrap support for H3AQC8 as seed ortholog is 97%.
Bootstrap support for A3LTL9 as seed ortholog is 100%.

Group of orthologs #483. Best score 309 bits
Score difference with first non-orthologous sequence - L.chalumnae:309 S.stipitis:309

H3AKV5              	100.00%		A3LX15              	100.00%
Bootstrap support for H3AKV5 as seed ortholog is 100%.
Bootstrap support for A3LX15 as seed ortholog is 100%.

Group of orthologs #484. Best score 309 bits
Score difference with first non-orthologous sequence - L.chalumnae:309 S.stipitis:309

H3ATH0              	100.00%		A3LWE2              	100.00%
Bootstrap support for H3ATH0 as seed ortholog is 100%.
Bootstrap support for A3LWE2 as seed ortholog is 100%.

Group of orthologs #485. Best score 309 bits
Score difference with first non-orthologous sequence - L.chalumnae:251 S.stipitis:309

H3BBL3              	100.00%		A3LVH9              	100.00%
Bootstrap support for H3BBL3 as seed ortholog is 100%.
Bootstrap support for A3LVH9 as seed ortholog is 100%.

Group of orthologs #486. Best score 308 bits
Score difference with first non-orthologous sequence - L.chalumnae:308 S.stipitis:308

H3BEZ8              	100.00%		A3LVW8              	100.00%
Bootstrap support for H3BEZ8 as seed ortholog is 100%.
Bootstrap support for A3LVW8 as seed ortholog is 100%.

Group of orthologs #487. Best score 307 bits
Score difference with first non-orthologous sequence - L.chalumnae:307 S.stipitis:307

H3AP00              	100.00%		A3LX67              	100.00%
                    	       		A3LUW5              	86.24%
Bootstrap support for H3AP00 as seed ortholog is 100%.
Bootstrap support for A3LX67 as seed ortholog is 100%.

Group of orthologs #488. Best score 307 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 S.stipitis:115

H3AXM8              	100.00%		A3LU51              	100.00%
H3AEQ2              	6.26%		
Bootstrap support for H3AXM8 as seed ortholog is 95%.
Bootstrap support for A3LU51 as seed ortholog is 99%.

Group of orthologs #489. Best score 307 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 S.stipitis:307

H2ZX24              	100.00%		A3LW69              	100.00%
Bootstrap support for H2ZX24 as seed ortholog is 99%.
Bootstrap support for A3LW69 as seed ortholog is 100%.

Group of orthologs #490. Best score 307 bits
Score difference with first non-orthologous sequence - L.chalumnae:257 S.stipitis:307

H3B6A1              	100.00%		A3M0F8              	100.00%
Bootstrap support for H3B6A1 as seed ortholog is 100%.
Bootstrap support for A3M0F8 as seed ortholog is 100%.

Group of orthologs #491. Best score 306 bits
Score difference with first non-orthologous sequence - L.chalumnae:306 S.stipitis:306

H3B4Y2              	100.00%		A3GGE7              	100.00%
Bootstrap support for H3B4Y2 as seed ortholog is 100%.
Bootstrap support for A3GGE7 as seed ortholog is 100%.

Group of orthologs #492. Best score 306 bits
Score difference with first non-orthologous sequence - L.chalumnae:306 S.stipitis:306

H3BCT6              	100.00%		A3LYW2              	100.00%
Bootstrap support for H3BCT6 as seed ortholog is 100%.
Bootstrap support for A3LYW2 as seed ortholog is 100%.

Group of orthologs #493. Best score 305 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 S.stipitis:305

M3XIE6              	100.00%		A3GG88              	100.00%
H3A012              	54.33%		
H3AV22              	9.59%		
Bootstrap support for M3XIE6 as seed ortholog is 90%.
Bootstrap support for A3GG88 as seed ortholog is 100%.

Group of orthologs #494. Best score 305 bits
Score difference with first non-orthologous sequence - L.chalumnae:305 S.stipitis:305

H3A244              	100.00%		A3LPA1              	100.00%
Bootstrap support for H3A244 as seed ortholog is 100%.
Bootstrap support for A3LPA1 as seed ortholog is 100%.

Group of orthologs #495. Best score 305 bits
Score difference with first non-orthologous sequence - L.chalumnae:305 S.stipitis:305

H3ABL2              	100.00%		A3LVJ1              	100.00%
Bootstrap support for H3ABL2 as seed ortholog is 100%.
Bootstrap support for A3LVJ1 as seed ortholog is 100%.

Group of orthologs #496. Best score 305 bits
Score difference with first non-orthologous sequence - L.chalumnae:305 S.stipitis:305

H3BFU0              	100.00%		A3GG12              	100.00%
Bootstrap support for H3BFU0 as seed ortholog is 100%.
Bootstrap support for A3GG12 as seed ortholog is 100%.

Group of orthologs #497. Best score 304 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 S.stipitis:131

H3B947              	100.00%		A3LT96              	100.00%
H2ZV04              	24.46%		
H3B4Y9              	18.75%		
Bootstrap support for H3B947 as seed ortholog is 100%.
Bootstrap support for A3LT96 as seed ortholog is 99%.

Group of orthologs #498. Best score 304 bits
Score difference with first non-orthologous sequence - L.chalumnae:304 S.stipitis:304

H3AFT5              	100.00%		A3LQ84              	100.00%
Bootstrap support for H3AFT5 as seed ortholog is 100%.
Bootstrap support for A3LQ84 as seed ortholog is 100%.

Group of orthologs #499. Best score 304 bits
Score difference with first non-orthologous sequence - L.chalumnae:304 S.stipitis:304

H3AQC5              	100.00%		A3GGD3              	100.00%
Bootstrap support for H3AQC5 as seed ortholog is 100%.
Bootstrap support for A3GGD3 as seed ortholog is 100%.

Group of orthologs #500. Best score 304 bits
Score difference with first non-orthologous sequence - L.chalumnae:304 S.stipitis:304

H3AMY6              	100.00%		A3LX01              	100.00%
Bootstrap support for H3AMY6 as seed ortholog is 100%.
Bootstrap support for A3LX01 as seed ortholog is 100%.

Group of orthologs #501. Best score 304 bits
Score difference with first non-orthologous sequence - L.chalumnae:304 S.stipitis:304

H3B9U7              	100.00%		A3LQG4              	100.00%
Bootstrap support for H3B9U7 as seed ortholog is 100%.
Bootstrap support for A3LQG4 as seed ortholog is 100%.

Group of orthologs #502. Best score 303 bits
Score difference with first non-orthologous sequence - L.chalumnae:182 S.stipitis:186

H3BB87              	100.00%		A3LZD4              	100.00%
H3ADX1              	43.82%		A3LUG5              	77.10%
H3AL16              	41.47%		
H3AR27              	41.18%		
Bootstrap support for H3BB87 as seed ortholog is 100%.
Bootstrap support for A3LZD4 as seed ortholog is 100%.

Group of orthologs #503. Best score 302 bits
Score difference with first non-orthologous sequence - L.chalumnae:302 S.stipitis:302

H3ADY5              	100.00%		A3LQH3              	100.00%
Bootstrap support for H3ADY5 as seed ortholog is 100%.
Bootstrap support for A3LQH3 as seed ortholog is 100%.

Group of orthologs #504. Best score 302 bits
Score difference with first non-orthologous sequence - L.chalumnae:302 S.stipitis:302

H3BHY8              	100.00%		A3GG59              	100.00%
Bootstrap support for H3BHY8 as seed ortholog is 100%.
Bootstrap support for A3GG59 as seed ortholog is 100%.

Group of orthologs #505. Best score 302 bits
Score difference with first non-orthologous sequence - L.chalumnae:302 S.stipitis:302

H3BHA1              	100.00%		A3LQN6              	100.00%
Bootstrap support for H3BHA1 as seed ortholog is 100%.
Bootstrap support for A3LQN6 as seed ortholog is 100%.

Group of orthologs #506. Best score 301 bits
Score difference with first non-orthologous sequence - L.chalumnae:301 S.stipitis:301

H3ARJ1              	100.00%		A3LPI4              	100.00%
H3AA47              	33.00%		
H2ZRJ2              	7.33%		
Bootstrap support for H3ARJ1 as seed ortholog is 100%.
Bootstrap support for A3LPI4 as seed ortholog is 100%.

Group of orthologs #507. Best score 301 bits
Score difference with first non-orthologous sequence - L.chalumnae:301 S.stipitis:301

H2ZYA3              	100.00%		A3LTA0              	100.00%
Bootstrap support for H2ZYA3 as seed ortholog is 100%.
Bootstrap support for A3LTA0 as seed ortholog is 100%.

Group of orthologs #508. Best score 301 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 S.stipitis:301

H3AFN1              	100.00%		A3LZZ8              	100.00%
Bootstrap support for H3AFN1 as seed ortholog is 99%.
Bootstrap support for A3LZZ8 as seed ortholog is 100%.

Group of orthologs #509. Best score 299 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 S.stipitis:299

H3BD96              	100.00%		A3GGS1              	100.00%
H3B9J3              	22.55%		
Bootstrap support for H3BD96 as seed ortholog is 95%.
Bootstrap support for A3GGS1 as seed ortholog is 100%.

Group of orthologs #510. Best score 299 bits
Score difference with first non-orthologous sequence - L.chalumnae:14 S.stipitis:299

H3B8S4              	100.00%		A3LRR5              	100.00%
H3BF83              	5.03%		
Bootstrap support for H3B8S4 as seed ortholog is 64%.
Alternative seed ortholog is M3XIW3 (14 bits away from this cluster)
Bootstrap support for A3LRR5 as seed ortholog is 100%.

Group of orthologs #511. Best score 299 bits
Score difference with first non-orthologous sequence - L.chalumnae:299 S.stipitis:299

H3BFS3              	100.00%		A3GHF0              	100.00%
                    	       		A3GFN9              	81.07%
Bootstrap support for H3BFS3 as seed ortholog is 100%.
Bootstrap support for A3GHF0 as seed ortholog is 100%.

Group of orthologs #512. Best score 299 bits
Score difference with first non-orthologous sequence - L.chalumnae:299 S.stipitis:299

H2ZUH4              	100.00%		A3LQV1              	100.00%
Bootstrap support for H2ZUH4 as seed ortholog is 100%.
Bootstrap support for A3LQV1 as seed ortholog is 100%.

Group of orthologs #513. Best score 299 bits
Score difference with first non-orthologous sequence - L.chalumnae:248 S.stipitis:299

H3B881              	100.00%		A3LP99              	100.00%
Bootstrap support for H3B881 as seed ortholog is 100%.
Bootstrap support for A3LP99 as seed ortholog is 100%.

Group of orthologs #514. Best score 299 bits
Score difference with first non-orthologous sequence - L.chalumnae:299 S.stipitis:299

H3AYD4              	100.00%		A3LYT2              	100.00%
Bootstrap support for H3AYD4 as seed ortholog is 100%.
Bootstrap support for A3LYT2 as seed ortholog is 100%.

Group of orthologs #515. Best score 298 bits
Score difference with first non-orthologous sequence - L.chalumnae:154 S.stipitis:298

H3B2Q8              	100.00%		A3LPR3              	100.00%
H3ABY5              	59.07%		
H3B3M5              	50.49%		
Bootstrap support for H3B2Q8 as seed ortholog is 99%.
Bootstrap support for A3LPR3 as seed ortholog is 100%.

Group of orthologs #516. Best score 298 bits
Score difference with first non-orthologous sequence - L.chalumnae:298 S.stipitis:298

H3A7Z4              	100.00%		A3GFP3              	100.00%
H3BIE1              	31.97%		
Bootstrap support for H3A7Z4 as seed ortholog is 100%.
Bootstrap support for A3GFP3 as seed ortholog is 100%.

Group of orthologs #517. Best score 298 bits
Score difference with first non-orthologous sequence - L.chalumnae:298 S.stipitis:298

H2ZU38              	100.00%		A3LZK5              	100.00%
H3ABG6              	48.14%		
Bootstrap support for H2ZU38 as seed ortholog is 100%.
Bootstrap support for A3LZK5 as seed ortholog is 100%.

Group of orthologs #518. Best score 298 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 S.stipitis:196

H3AXT0              	100.00%		A3LRF3              	100.00%
H3AYA0              	73.87%		
Bootstrap support for H3AXT0 as seed ortholog is 100%.
Bootstrap support for A3LRF3 as seed ortholog is 100%.

Group of orthologs #519. Best score 298 bits
Score difference with first non-orthologous sequence - L.chalumnae:204 S.stipitis:103

H3B9X9              	100.00%		A3LTL8              	100.00%
H3BAP0              	50.74%		
Bootstrap support for H3B9X9 as seed ortholog is 99%.
Bootstrap support for A3LTL8 as seed ortholog is 93%.

Group of orthologs #520. Best score 297 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 S.stipitis:50

H2ZVH7              	100.00%		A3GGR0              	100.00%
Bootstrap support for H2ZVH7 as seed ortholog is 99%.
Bootstrap support for A3GGR0 as seed ortholog is 91%.

Group of orthologs #521. Best score 297 bits
Score difference with first non-orthologous sequence - L.chalumnae:297 S.stipitis:297

H3AQM5              	100.00%		A3GH67              	100.00%
Bootstrap support for H3AQM5 as seed ortholog is 100%.
Bootstrap support for A3GH67 as seed ortholog is 100%.

Group of orthologs #522. Best score 296 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 S.stipitis:296

H3A961              	100.00%		A3LXG8              	100.00%
H3BD34              	69.07%		
H3ACE2              	36.08%		
H2ZVW0              	16.49%		
Bootstrap support for H3A961 as seed ortholog is 100%.
Bootstrap support for A3LXG8 as seed ortholog is 100%.

Group of orthologs #523. Best score 296 bits
Score difference with first non-orthologous sequence - L.chalumnae:296 S.stipitis:296

H2ZV29              	100.00%		A3LX87              	100.00%
H3BAP8              	45.43%		
Bootstrap support for H2ZV29 as seed ortholog is 100%.
Bootstrap support for A3LX87 as seed ortholog is 100%.

Group of orthologs #524. Best score 295 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 S.stipitis:295

H3BDF5              	100.00%		A3LSB2              	100.00%
H3A2R8              	37.03%		
H3B651              	34.95%		
H3B2C6              	34.57%		
H3ACD1              	19.71%		
H3BBC6              	16.40%		
H3ADV3              	16.17%		
H3BIB1              	9.39%		
H2ZU77              	6.00%		
Bootstrap support for H3BDF5 as seed ortholog is 90%.
Bootstrap support for A3LSB2 as seed ortholog is 100%.

Group of orthologs #525. Best score 295 bits
Score difference with first non-orthologous sequence - L.chalumnae:234 S.stipitis:68

H3AE65              	100.00%		A3LU37              	100.00%
H3B461              	49.43%		
Bootstrap support for H3AE65 as seed ortholog is 100%.
Bootstrap support for A3LU37 as seed ortholog is 97%.

Group of orthologs #526. Best score 295 bits
Score difference with first non-orthologous sequence - L.chalumnae:295 S.stipitis:295

H3AIQ7              	100.00%		A3LVH0              	100.00%
H3A7A8              	70.77%		
Bootstrap support for H3AIQ7 as seed ortholog is 100%.
Bootstrap support for A3LVH0 as seed ortholog is 100%.

Group of orthologs #527. Best score 295 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 S.stipitis:29

H3AV14              	100.00%		A3LRR8              	100.00%
H3AF81              	19.90%		
Bootstrap support for H3AV14 as seed ortholog is 93%.
Bootstrap support for A3LRR8 as seed ortholog is 78%.

Group of orthologs #528. Best score 295 bits
Score difference with first non-orthologous sequence - L.chalumnae:295 S.stipitis:295

H3A9R2              	100.00%		A3LXW6              	100.00%
Bootstrap support for H3A9R2 as seed ortholog is 100%.
Bootstrap support for A3LXW6 as seed ortholog is 100%.

Group of orthologs #529. Best score 295 bits
Score difference with first non-orthologous sequence - L.chalumnae:190 S.stipitis:295

H3AVJ8              	100.00%		A3GHA2              	100.00%
Bootstrap support for H3AVJ8 as seed ortholog is 99%.
Bootstrap support for A3GHA2 as seed ortholog is 100%.

Group of orthologs #530. Best score 295 bits
Score difference with first non-orthologous sequence - L.chalumnae:295 S.stipitis:295

H3BGJ8              	100.00%		A3GFS1              	100.00%
Bootstrap support for H3BGJ8 as seed ortholog is 100%.
Bootstrap support for A3GFS1 as seed ortholog is 100%.

Group of orthologs #531. Best score 295 bits
Score difference with first non-orthologous sequence - L.chalumnae:295 S.stipitis:295

H3B6P9              	100.00%		A3LX74              	100.00%
Bootstrap support for H3B6P9 as seed ortholog is 100%.
Bootstrap support for A3LX74 as seed ortholog is 100%.

Group of orthologs #532. Best score 295 bits
Score difference with first non-orthologous sequence - L.chalumnae:208 S.stipitis:295

H3BAC1              	100.00%		A3LXZ1              	100.00%
Bootstrap support for H3BAC1 as seed ortholog is 100%.
Bootstrap support for A3LXZ1 as seed ortholog is 100%.

Group of orthologs #533. Best score 294 bits
Score difference with first non-orthologous sequence - L.chalumnae:294 S.stipitis:294

H3AIR8              	100.00%		A3GHJ6              	100.00%
Bootstrap support for H3AIR8 as seed ortholog is 100%.
Bootstrap support for A3GHJ6 as seed ortholog is 100%.

Group of orthologs #534. Best score 294 bits
Score difference with first non-orthologous sequence - L.chalumnae:294 S.stipitis:294

H3AZH8              	100.00%		A3GFH5              	100.00%
Bootstrap support for H3AZH8 as seed ortholog is 100%.
Bootstrap support for A3GFH5 as seed ortholog is 100%.

Group of orthologs #535. Best score 293 bits
Score difference with first non-orthologous sequence - L.chalumnae:293 S.stipitis:293

H2ZSR3              	100.00%		A3LRH5              	100.00%
H3BIJ5              	73.79%		
H2ZYX8              	54.54%		
Bootstrap support for H2ZSR3 as seed ortholog is 100%.
Bootstrap support for A3LRH5 as seed ortholog is 100%.

Group of orthologs #536. Best score 293 bits
Score difference with first non-orthologous sequence - L.chalumnae:293 S.stipitis:293

H3ASB6              	100.00%		A3GGL3              	100.00%
H3ARM7              	45.42%		
Bootstrap support for H3ASB6 as seed ortholog is 100%.
Bootstrap support for A3GGL3 as seed ortholog is 100%.

Group of orthologs #537. Best score 293 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 S.stipitis:293

H2ZXC4              	100.00%		A3LX56              	100.00%
Bootstrap support for H2ZXC4 as seed ortholog is 92%.
Bootstrap support for A3LX56 as seed ortholog is 100%.

Group of orthologs #538. Best score 293 bits
Score difference with first non-orthologous sequence - L.chalumnae:241 S.stipitis:293

H3B1M2              	100.00%		A3LNW3              	100.00%
Bootstrap support for H3B1M2 as seed ortholog is 100%.
Bootstrap support for A3LNW3 as seed ortholog is 100%.

Group of orthologs #539. Best score 292 bits
Score difference with first non-orthologous sequence - L.chalumnae:141 S.stipitis:292

H3ANL8              	100.00%		A3LXS8              	100.00%
H3AV10              	8.00%		A3LP77              	10.26%
Bootstrap support for H3ANL8 as seed ortholog is 98%.
Bootstrap support for A3LXS8 as seed ortholog is 100%.

Group of orthologs #540. Best score 292 bits
Score difference with first non-orthologous sequence - L.chalumnae:292 S.stipitis:292

H3AV80              	100.00%		A3LRZ6              	100.00%
H2ZSN5              	58.09%		
Bootstrap support for H3AV80 as seed ortholog is 100%.
Bootstrap support for A3LRZ6 as seed ortholog is 100%.

Group of orthologs #541. Best score 292 bits
Score difference with first non-orthologous sequence - L.chalumnae:292 S.stipitis:292

H2ZTP2              	100.00%		A3LWI3              	100.00%
Bootstrap support for H2ZTP2 as seed ortholog is 100%.
Bootstrap support for A3LWI3 as seed ortholog is 100%.

Group of orthologs #542. Best score 292 bits
Score difference with first non-orthologous sequence - L.chalumnae:292 S.stipitis:292

H2ZVJ5              	100.00%		A3LWI9              	100.00%
Bootstrap support for H2ZVJ5 as seed ortholog is 100%.
Bootstrap support for A3LWI9 as seed ortholog is 100%.

Group of orthologs #543. Best score 292 bits
Score difference with first non-orthologous sequence - L.chalumnae:292 S.stipitis:292

H3A712              	100.00%		A3LS15              	100.00%
Bootstrap support for H3A712 as seed ortholog is 100%.
Bootstrap support for A3LS15 as seed ortholog is 100%.

Group of orthologs #544. Best score 292 bits
Score difference with first non-orthologous sequence - L.chalumnae:36 S.stipitis:6

H3AGZ3              	100.00%		A3LX20              	100.00%
Bootstrap support for H3AGZ3 as seed ortholog is 72%.
Alternative seed ortholog is H3B484 (36 bits away from this cluster)
Bootstrap support for A3LX20 as seed ortholog is 56%.
Alternative seed ortholog is A3LMX5 (6 bits away from this cluster)

Group of orthologs #545. Best score 292 bits
Score difference with first non-orthologous sequence - L.chalumnae:292 S.stipitis:292

H3ARL2              	100.00%		A3LXW4              	100.00%
Bootstrap support for H3ARL2 as seed ortholog is 100%.
Bootstrap support for A3LXW4 as seed ortholog is 100%.

Group of orthologs #546. Best score 291 bits
Score difference with first non-orthologous sequence - L.chalumnae:24 S.stipitis:61

H3A5T1              	100.00%		A3LQD3              	100.00%
M3XIR9              	72.13%		
H3BHT2              	38.65%		
H3A2Y5              	6.90%		
H2ZVZ1              	5.89%		
Bootstrap support for H3A5T1 as seed ortholog is 78%.
Bootstrap support for A3LQD3 as seed ortholog is 94%.

Group of orthologs #547. Best score 291 bits
Score difference with first non-orthologous sequence - L.chalumnae:291 S.stipitis:291

M3XLB2              	100.00%		A3LX95              	100.00%
H3A4E9              	13.74%		
Bootstrap support for M3XLB2 as seed ortholog is 100%.
Bootstrap support for A3LX95 as seed ortholog is 100%.

Group of orthologs #548. Best score 291 bits
Score difference with first non-orthologous sequence - L.chalumnae:291 S.stipitis:180

H3A7N5              	100.00%		A3GH90              	100.00%
Bootstrap support for H3A7N5 as seed ortholog is 100%.
Bootstrap support for A3GH90 as seed ortholog is 99%.

Group of orthologs #549. Best score 291 bits
Score difference with first non-orthologous sequence - L.chalumnae:291 S.stipitis:291

H3BDT5              	100.00%		A3LS75              	100.00%
Bootstrap support for H3BDT5 as seed ortholog is 100%.
Bootstrap support for A3LS75 as seed ortholog is 100%.

Group of orthologs #550. Best score 290 bits
Score difference with first non-orthologous sequence - L.chalumnae:226 S.stipitis:79

H3AYF4              	100.00%		A3LWN8              	100.00%
H3AWK9              	62.83%		
H3B8M1              	55.10%		
Bootstrap support for H3AYF4 as seed ortholog is 100%.
Bootstrap support for A3LWN8 as seed ortholog is 95%.

Group of orthologs #551. Best score 290 bits
Score difference with first non-orthologous sequence - L.chalumnae:290 S.stipitis:290

H3A2A4              	100.00%		A3GF09              	100.00%
Bootstrap support for H3A2A4 as seed ortholog is 100%.
Bootstrap support for A3GF09 as seed ortholog is 100%.

Group of orthologs #552. Best score 290 bits
Score difference with first non-orthologous sequence - L.chalumnae:290 S.stipitis:290

H3AU89              	100.00%		A3LYF4              	100.00%
Bootstrap support for H3AU89 as seed ortholog is 100%.
Bootstrap support for A3LYF4 as seed ortholog is 100%.

Group of orthologs #553. Best score 290 bits
Score difference with first non-orthologous sequence - L.chalumnae:214 S.stipitis:81

H3BAZ5              	100.00%		A3LYB2              	100.00%
Bootstrap support for H3BAZ5 as seed ortholog is 100%.
Bootstrap support for A3LYB2 as seed ortholog is 99%.

Group of orthologs #554. Best score 289 bits
Score difference with first non-orthologous sequence - L.chalumnae:228 S.stipitis:289

H3AFE7              	100.00%		A3LYP7              	100.00%
H3A1E0              	42.17%		
Bootstrap support for H3AFE7 as seed ortholog is 100%.
Bootstrap support for A3LYP7 as seed ortholog is 100%.

Group of orthologs #555. Best score 289 bits
Score difference with first non-orthologous sequence - L.chalumnae:289 S.stipitis:289

H2ZW28              	100.00%		A3GFV4              	100.00%
Bootstrap support for H2ZW28 as seed ortholog is 100%.
Bootstrap support for A3GFV4 as seed ortholog is 100%.

Group of orthologs #556. Best score 289 bits
Score difference with first non-orthologous sequence - L.chalumnae:289 S.stipitis:226

H3A155              	100.00%		A3LRZ0              	100.00%
Bootstrap support for H3A155 as seed ortholog is 100%.
Bootstrap support for A3LRZ0 as seed ortholog is 100%.

Group of orthologs #557. Best score 289 bits
Score difference with first non-orthologous sequence - L.chalumnae:289 S.stipitis:289

H3ANS2              	100.00%		A3LVE9              	100.00%
Bootstrap support for H3ANS2 as seed ortholog is 100%.
Bootstrap support for A3LVE9 as seed ortholog is 100%.

Group of orthologs #558. Best score 289 bits
Score difference with first non-orthologous sequence - L.chalumnae:289 S.stipitis:114

H3BCU7              	100.00%		A3LZB1              	100.00%
Bootstrap support for H3BCU7 as seed ortholog is 100%.
Bootstrap support for A3LZB1 as seed ortholog is 98%.

Group of orthologs #559. Best score 288 bits
Score difference with first non-orthologous sequence - L.chalumnae:288 S.stipitis:288

H3A9D3              	100.00%		A3LT67              	100.00%
Bootstrap support for H3A9D3 as seed ortholog is 100%.
Bootstrap support for A3LT67 as seed ortholog is 100%.

Group of orthologs #560. Best score 288 bits
Score difference with first non-orthologous sequence - L.chalumnae:158 S.stipitis:124

H3BB10              	100.00%		A3LXK3              	100.00%
Bootstrap support for H3BB10 as seed ortholog is 99%.
Bootstrap support for A3LXK3 as seed ortholog is 99%.

Group of orthologs #561. Best score 287 bits
Score difference with first non-orthologous sequence - L.chalumnae:287 S.stipitis:287

H2ZVQ5              	100.00%		A3LQE6              	100.00%
H3ATG8              	25.86%		
H3AW08              	25.45%		
H3AZR5              	13.48%		
H3AYP0              	13.20%		
Bootstrap support for H2ZVQ5 as seed ortholog is 100%.
Bootstrap support for A3LQE6 as seed ortholog is 100%.

Group of orthologs #562. Best score 287 bits
Score difference with first non-orthologous sequence - L.chalumnae:240 S.stipitis:287

H3BFK8              	100.00%		A3LUY3              	100.00%
H3A0P1              	39.86%		
H3APV5              	29.92%		
H3BBY6              	13.25%		
Bootstrap support for H3BFK8 as seed ortholog is 100%.
Bootstrap support for A3LUY3 as seed ortholog is 100%.

Group of orthologs #563. Best score 287 bits
Score difference with first non-orthologous sequence - L.chalumnae:287 S.stipitis:287

H2ZY92              	100.00%		A3LQP8              	100.00%
H3APQ7              	62.04%		
H3ACW3              	53.53%		
Bootstrap support for H2ZY92 as seed ortholog is 100%.
Bootstrap support for A3LQP8 as seed ortholog is 100%.

Group of orthologs #564. Best score 287 bits
Score difference with first non-orthologous sequence - L.chalumnae:287 S.stipitis:287

H3AB50              	100.00%		A3LVU3              	100.00%
H3AJQ2              	63.21%		
Bootstrap support for H3AB50 as seed ortholog is 100%.
Bootstrap support for A3LVU3 as seed ortholog is 100%.

Group of orthologs #565. Best score 287 bits
Score difference with first non-orthologous sequence - L.chalumnae:287 S.stipitis:287

H2ZXW5              	100.00%		A3LU31              	100.00%
Bootstrap support for H2ZXW5 as seed ortholog is 100%.
Bootstrap support for A3LU31 as seed ortholog is 100%.

Group of orthologs #566. Best score 287 bits
Score difference with first non-orthologous sequence - L.chalumnae:287 S.stipitis:287

H3BC11              	100.00%		A3LUA8              	100.00%
Bootstrap support for H3BC11 as seed ortholog is 100%.
Bootstrap support for A3LUA8 as seed ortholog is 100%.

Group of orthologs #567. Best score 286 bits
Score difference with first non-orthologous sequence - L.chalumnae:195 S.stipitis:193

H2ZZV4              	100.00%		A3LYI5              	100.00%
H3B4C1              	41.07%		
H3B1M9              	17.27%		
H3ABJ7              	15.16%		
H3A5Z4              	11.71%		
H3BGH6              	7.29%		
Bootstrap support for H2ZZV4 as seed ortholog is 100%.
Bootstrap support for A3LYI5 as seed ortholog is 99%.

Group of orthologs #568. Best score 286 bits
Score difference with first non-orthologous sequence - L.chalumnae:286 S.stipitis:286

H3AMB7              	100.00%		A3LY04              	100.00%
H2ZVB0              	22.49%		
H3A5I8              	22.49%		
Bootstrap support for H3AMB7 as seed ortholog is 100%.
Bootstrap support for A3LY04 as seed ortholog is 100%.

Group of orthologs #569. Best score 286 bits
Score difference with first non-orthologous sequence - L.chalumnae:185 S.stipitis:286

H2ZUG2              	100.00%		A3LNI4              	100.00%
Bootstrap support for H2ZUG2 as seed ortholog is 100%.
Bootstrap support for A3LNI4 as seed ortholog is 100%.

Group of orthologs #570. Best score 286 bits
Score difference with first non-orthologous sequence - L.chalumnae:286 S.stipitis:286

H3B2C3              	100.00%		A3LR59              	100.00%
Bootstrap support for H3B2C3 as seed ortholog is 100%.
Bootstrap support for A3LR59 as seed ortholog is 100%.

Group of orthologs #571. Best score 285 bits
Score difference with first non-orthologous sequence - L.chalumnae:285 S.stipitis:285

H3AS92              	100.00%		A3LUT4              	100.00%
Bootstrap support for H3AS92 as seed ortholog is 100%.
Bootstrap support for A3LUT4 as seed ortholog is 100%.

Group of orthologs #572. Best score 285 bits
Score difference with first non-orthologous sequence - L.chalumnae:285 S.stipitis:285

H3BCK7              	100.00%		A3LRB2              	100.00%
Bootstrap support for H3BCK7 as seed ortholog is 100%.
Bootstrap support for A3LRB2 as seed ortholog is 100%.

Group of orthologs #573. Best score 284 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 S.stipitis:284

H3A108              	100.00%		A3GI75              	100.00%
H3A4A6              	64.17%		
Bootstrap support for H3A108 as seed ortholog is 99%.
Bootstrap support for A3GI75 as seed ortholog is 100%.

Group of orthologs #574. Best score 284 bits
Score difference with first non-orthologous sequence - L.chalumnae:284 S.stipitis:284

H3B0Y8              	100.00%		A3GHS7              	100.00%
                    	       		A3LZ10              	38.79%
Bootstrap support for H3B0Y8 as seed ortholog is 100%.
Bootstrap support for A3GHS7 as seed ortholog is 100%.

Group of orthologs #575. Best score 284 bits
Score difference with first non-orthologous sequence - L.chalumnae:162 S.stipitis:179

H3AT29              	100.00%		A3GI13              	100.00%
Bootstrap support for H3AT29 as seed ortholog is 99%.
Bootstrap support for A3GI13 as seed ortholog is 100%.

Group of orthologs #576. Best score 284 bits
Score difference with first non-orthologous sequence - L.chalumnae:218 S.stipitis:284

H3B2K6              	100.00%		A3LQR9              	100.00%
Bootstrap support for H3B2K6 as seed ortholog is 100%.
Bootstrap support for A3LQR9 as seed ortholog is 100%.

Group of orthologs #577. Best score 283 bits
Score difference with first non-orthologous sequence - L.chalumnae:283 S.stipitis:283

H3BDK8              	100.00%		A3LRV4              	100.00%
                    	       		A3LSN7              	8.28%
                    	       		A3GIE7              	7.27%
Bootstrap support for H3BDK8 as seed ortholog is 100%.
Bootstrap support for A3LRV4 as seed ortholog is 100%.

Group of orthologs #578. Best score 283 bits
Score difference with first non-orthologous sequence - L.chalumnae:229 S.stipitis:283

H3AVP9              	100.00%		A3LQN8              	100.00%
Bootstrap support for H3AVP9 as seed ortholog is 100%.
Bootstrap support for A3LQN8 as seed ortholog is 100%.

Group of orthologs #579. Best score 282 bits
Score difference with first non-orthologous sequence - L.chalumnae:73 S.stipitis:81

H3ADM2              	100.00%		A3LQX7              	100.00%
H3BBI8              	50.00%		A3GHC3              	57.76%
H3A4Z3              	46.67%		
Bootstrap support for H3ADM2 as seed ortholog is 99%.
Bootstrap support for A3LQX7 as seed ortholog is 99%.

Group of orthologs #580. Best score 282 bits
Score difference with first non-orthologous sequence - L.chalumnae:282 S.stipitis:282

H3ARM2              	100.00%		A3LNS7              	100.00%
H2ZY34              	6.70%		
Bootstrap support for H3ARM2 as seed ortholog is 100%.
Bootstrap support for A3LNS7 as seed ortholog is 100%.

Group of orthologs #581. Best score 282 bits
Score difference with first non-orthologous sequence - L.chalumnae:282 S.stipitis:282

H3ADK8              	100.00%		A3LN21              	100.00%
Bootstrap support for H3ADK8 as seed ortholog is 100%.
Bootstrap support for A3LN21 as seed ortholog is 100%.

Group of orthologs #582. Best score 282 bits
Score difference with first non-orthologous sequence - L.chalumnae:282 S.stipitis:282

H3B108              	100.00%		A3LU28              	100.00%
Bootstrap support for H3B108 as seed ortholog is 100%.
Bootstrap support for A3LU28 as seed ortholog is 100%.

Group of orthologs #583. Best score 282 bits
Score difference with first non-orthologous sequence - L.chalumnae:175 S.stipitis:282

H3B607              	100.00%		A3LW07              	100.00%
Bootstrap support for H3B607 as seed ortholog is 99%.
Bootstrap support for A3LW07 as seed ortholog is 100%.

Group of orthologs #584. Best score 281 bits
Score difference with first non-orthologous sequence - L.chalumnae:41 S.stipitis:281

H3BB52              	100.00%		A3LUU6              	100.00%
H3AD58              	61.05%		
Bootstrap support for H3BB52 as seed ortholog is 73%.
Alternative seed ortholog is H3BCZ3 (41 bits away from this cluster)
Bootstrap support for A3LUU6 as seed ortholog is 100%.

Group of orthologs #585. Best score 281 bits
Score difference with first non-orthologous sequence - L.chalumnae:281 S.stipitis:281

H3BDX4              	100.00%		A3LU89              	100.00%
H3ADT7              	20.63%		
Bootstrap support for H3BDX4 as seed ortholog is 100%.
Bootstrap support for A3LU89 as seed ortholog is 100%.

Group of orthologs #586. Best score 280 bits
Score difference with first non-orthologous sequence - L.chalumnae:28 S.stipitis:21

H3AZG1              	100.00%		A3LQE1              	100.00%
H3A9B4              	49.14%		
M3XH48              	8.62%		
H3AUY0              	8.62%		
Bootstrap support for H3AZG1 as seed ortholog is 91%.
Bootstrap support for A3LQE1 as seed ortholog is 80%.

Group of orthologs #587. Best score 280 bits
Score difference with first non-orthologous sequence - L.chalumnae:280 S.stipitis:280

H3AES1              	100.00%		A3LMX2              	100.00%
Bootstrap support for H3AES1 as seed ortholog is 100%.
Bootstrap support for A3LMX2 as seed ortholog is 100%.

Group of orthologs #588. Best score 280 bits
Score difference with first non-orthologous sequence - L.chalumnae:280 S.stipitis:280

H3ATB7              	100.00%		A3LTU9              	100.00%
Bootstrap support for H3ATB7 as seed ortholog is 100%.
Bootstrap support for A3LTU9 as seed ortholog is 100%.

Group of orthologs #589. Best score 280 bits
Score difference with first non-orthologous sequence - L.chalumnae:280 S.stipitis:280

H3AUQ6              	100.00%		A3M0D6              	100.00%
Bootstrap support for H3AUQ6 as seed ortholog is 100%.
Bootstrap support for A3M0D6 as seed ortholog is 100%.

Group of orthologs #590. Best score 279 bits
Score difference with first non-orthologous sequence - L.chalumnae:279 S.stipitis:279

H3A5W1              	100.00%		A3LW21              	100.00%
H2ZX12              	54.47%		
H2ZXC7              	43.36%		
Bootstrap support for H3A5W1 as seed ortholog is 100%.
Bootstrap support for A3LW21 as seed ortholog is 100%.

Group of orthologs #591. Best score 279 bits
Score difference with first non-orthologous sequence - L.chalumnae:279 S.stipitis:279

H3BD54              	100.00%		A3GH98              	100.00%
H3AVH1              	22.40%		A3GH96              	42.94%
Bootstrap support for H3BD54 as seed ortholog is 100%.
Bootstrap support for A3GH98 as seed ortholog is 100%.

Group of orthologs #592. Best score 279 bits
Score difference with first non-orthologous sequence - L.chalumnae:279 S.stipitis:279

H2ZZN5              	100.00%		A3GF51              	100.00%
Bootstrap support for H2ZZN5 as seed ortholog is 100%.
Bootstrap support for A3GF51 as seed ortholog is 100%.

Group of orthologs #593. Best score 279 bits
Score difference with first non-orthologous sequence - L.chalumnae:279 S.stipitis:279

H3ABZ1              	100.00%		A3LW79              	100.00%
Bootstrap support for H3ABZ1 as seed ortholog is 100%.
Bootstrap support for A3LW79 as seed ortholog is 100%.

Group of orthologs #594. Best score 278 bits
Score difference with first non-orthologous sequence - L.chalumnae:211 S.stipitis:140

M3XGW1              	100.00%		A3LS04              	100.00%
H3ATX2              	55.75%		
H3B4E0              	36.55%		
H3B4R4              	27.06%		
Bootstrap support for M3XGW1 as seed ortholog is 100%.
Bootstrap support for A3LS04 as seed ortholog is 99%.

Group of orthologs #595. Best score 278 bits
Score difference with first non-orthologous sequence - L.chalumnae:278 S.stipitis:278

H3BG01              	100.00%		A3LP40              	100.00%
H3BE45              	50.23%		
Bootstrap support for H3BG01 as seed ortholog is 100%.
Bootstrap support for A3LP40 as seed ortholog is 100%.

Group of orthologs #596. Best score 278 bits
Score difference with first non-orthologous sequence - L.chalumnae:278 S.stipitis:278

H3A6N9              	100.00%		A3LMT1              	100.00%
Bootstrap support for H3A6N9 as seed ortholog is 100%.
Bootstrap support for A3LMT1 as seed ortholog is 100%.

Group of orthologs #597. Best score 278 bits
Score difference with first non-orthologous sequence - L.chalumnae:170 S.stipitis:278

H3AWG7              	100.00%		A3LX18              	100.00%
Bootstrap support for H3AWG7 as seed ortholog is 100%.
Bootstrap support for A3LX18 as seed ortholog is 100%.

Group of orthologs #598. Best score 277 bits
Score difference with first non-orthologous sequence - L.chalumnae:190 S.stipitis:277

H3BIP7              	100.00%		A3LVU6              	100.00%
H3B4Y1              	55.14%		
H3AFN0              	48.36%		
H3ACW6              	47.90%		
Bootstrap support for H3BIP7 as seed ortholog is 100%.
Bootstrap support for A3LVU6 as seed ortholog is 100%.

Group of orthologs #599. Best score 277 bits
Score difference with first non-orthologous sequence - L.chalumnae:277 S.stipitis:277

H3B558              	100.00%		A3M087              	100.00%
H3AI51              	28.40%		
Bootstrap support for H3B558 as seed ortholog is 100%.
Bootstrap support for A3M087 as seed ortholog is 100%.

Group of orthologs #600. Best score 277 bits
Score difference with first non-orthologous sequence - L.chalumnae:225 S.stipitis:277

H3A1L6              	100.00%		A3LWP4              	100.00%
Bootstrap support for H3A1L6 as seed ortholog is 100%.
Bootstrap support for A3LWP4 as seed ortholog is 100%.

Group of orthologs #601. Best score 277 bits
Score difference with first non-orthologous sequence - L.chalumnae:277 S.stipitis:277

H3ANP9              	100.00%		A3GEX4              	100.00%
Bootstrap support for H3ANP9 as seed ortholog is 100%.
Bootstrap support for A3GEX4 as seed ortholog is 100%.

Group of orthologs #602. Best score 277 bits
Score difference with first non-orthologous sequence - L.chalumnae:277 S.stipitis:277

H3AXW3              	100.00%		A3LVS9              	100.00%
Bootstrap support for H3AXW3 as seed ortholog is 100%.
Bootstrap support for A3LVS9 as seed ortholog is 100%.

Group of orthologs #603. Best score 276 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 S.stipitis:43

H3ATW7              	100.00%		A3LXL6              	100.00%
H2ZXD4              	56.05%		
H3ARF4              	43.27%		
Bootstrap support for H3ATW7 as seed ortholog is 99%.
Bootstrap support for A3LXL6 as seed ortholog is 88%.

Group of orthologs #604. Best score 276 bits
Score difference with first non-orthologous sequence - L.chalumnae:276 S.stipitis:276

H3B301              	100.00%		A3GGH3              	100.00%
H3B4W8              	37.10%		
Bootstrap support for H3B301 as seed ortholog is 100%.
Bootstrap support for A3GGH3 as seed ortholog is 100%.

Group of orthologs #605. Best score 276 bits
Score difference with first non-orthologous sequence - L.chalumnae:276 S.stipitis:276

H3AI49              	100.00%		A3GGM5              	100.00%
Bootstrap support for H3AI49 as seed ortholog is 100%.
Bootstrap support for A3GGM5 as seed ortholog is 100%.

Group of orthologs #606. Best score 276 bits
Score difference with first non-orthologous sequence - L.chalumnae:122 S.stipitis:276

H3AYI5              	100.00%		A3LSX3              	100.00%
Bootstrap support for H3AYI5 as seed ortholog is 98%.
Bootstrap support for A3LSX3 as seed ortholog is 100%.

Group of orthologs #607. Best score 275 bits
Score difference with first non-orthologous sequence - L.chalumnae:275 S.stipitis:275

H3A9S8              	100.00%		A3LMT2              	100.00%
Bootstrap support for H3A9S8 as seed ortholog is 100%.
Bootstrap support for A3LMT2 as seed ortholog is 100%.

Group of orthologs #608. Best score 274 bits
Score difference with first non-orthologous sequence - L.chalumnae:274 S.stipitis:274

H3A7G4              	100.00%		A3GI48              	100.00%
H3AN53              	25.11%		A3GF29              	28.79%
Bootstrap support for H3A7G4 as seed ortholog is 100%.
Bootstrap support for A3GI48 as seed ortholog is 100%.

Group of orthologs #609. Best score 274 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 S.stipitis:274

H3B5T0              	100.00%		A3LVY9              	100.00%
H3A4V8              	72.22%		
H3B232              	19.84%		
Bootstrap support for H3B5T0 as seed ortholog is 96%.
Bootstrap support for A3LVY9 as seed ortholog is 100%.

Group of orthologs #610. Best score 274 bits
Score difference with first non-orthologous sequence - L.chalumnae:274 S.stipitis:216

H3AHP7              	100.00%		A3LNF8              	100.00%
Bootstrap support for H3AHP7 as seed ortholog is 100%.
Bootstrap support for A3LNF8 as seed ortholog is 100%.

Group of orthologs #611. Best score 274 bits
Score difference with first non-orthologous sequence - L.chalumnae:274 S.stipitis:274

H3ADX7              	100.00%		A3LYW1              	100.00%
Bootstrap support for H3ADX7 as seed ortholog is 100%.
Bootstrap support for A3LYW1 as seed ortholog is 100%.

Group of orthologs #612. Best score 273 bits
Score difference with first non-orthologous sequence - L.chalumnae:273 S.stipitis:273

H3A6D1              	100.00%		A3LR94              	100.00%
H3ASN3              	31.76%		
Bootstrap support for H3A6D1 as seed ortholog is 100%.
Bootstrap support for A3LR94 as seed ortholog is 100%.

Group of orthologs #613. Best score 273 bits
Score difference with first non-orthologous sequence - L.chalumnae:273 S.stipitis:273

H3AG59              	100.00%		A3LTQ5              	100.00%
Bootstrap support for H3AG59 as seed ortholog is 100%.
Bootstrap support for A3LTQ5 as seed ortholog is 100%.

Group of orthologs #614. Best score 273 bits
Score difference with first non-orthologous sequence - L.chalumnae:273 S.stipitis:273

H3ASY8              	100.00%		A3GG79              	100.00%
Bootstrap support for H3ASY8 as seed ortholog is 100%.
Bootstrap support for A3GG79 as seed ortholog is 100%.

Group of orthologs #615. Best score 273 bits
Score difference with first non-orthologous sequence - L.chalumnae:273 S.stipitis:273

H3BFY7              	100.00%		A3LSH4              	100.00%
Bootstrap support for H3BFY7 as seed ortholog is 100%.
Bootstrap support for A3LSH4 as seed ortholog is 100%.

Group of orthologs #616. Best score 272 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 S.stipitis:170

H3AW20              	100.00%		A3LXX3              	100.00%
H3BB91              	45.00%		
H3ATF1              	43.12%		
H3BBM7              	33.12%		
H3ASP3              	12.50%		
Bootstrap support for H3AW20 as seed ortholog is 99%.
Bootstrap support for A3LXX3 as seed ortholog is 100%.

Group of orthologs #617. Best score 272 bits
Score difference with first non-orthologous sequence - L.chalumnae:272 S.stipitis:272

H3AU52              	100.00%		A3M057              	100.00%
H3A6D9              	29.03%		
Bootstrap support for H3AU52 as seed ortholog is 100%.
Bootstrap support for A3M057 as seed ortholog is 100%.

Group of orthologs #618. Best score 272 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 S.stipitis:272

H3ANZ3              	100.00%		A3LVC4              	100.00%
Bootstrap support for H3ANZ3 as seed ortholog is 90%.
Bootstrap support for A3LVC4 as seed ortholog is 100%.

Group of orthologs #619. Best score 272 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 S.stipitis:142

H3BE21              	100.00%		A3GGG6              	100.00%
Bootstrap support for H3BE21 as seed ortholog is 96%.
Bootstrap support for A3GGG6 as seed ortholog is 99%.

Group of orthologs #620. Best score 271 bits
Score difference with first non-orthologous sequence - L.chalumnae:271 S.stipitis:271

H3BEZ9              	100.00%		A3LY82              	100.00%
Bootstrap support for H3BEZ9 as seed ortholog is 100%.
Bootstrap support for A3LY82 as seed ortholog is 100%.

Group of orthologs #621. Best score 270 bits
Score difference with first non-orthologous sequence - L.chalumnae:165 S.stipitis:270

H3A7L2              	100.00%		A3LP27              	100.00%
H3AXV6              	65.36%		
H3BAS0              	29.68%		
M3XKM7              	29.21%		
H3ANG3              	20.44%		
Bootstrap support for H3A7L2 as seed ortholog is 99%.
Bootstrap support for A3LP27 as seed ortholog is 100%.

Group of orthologs #622. Best score 270 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 S.stipitis:270

H3BC57              	100.00%		A3LW98              	100.00%
H3B7S2              	51.20%		
H3B5I8              	32.24%		
Bootstrap support for H3BC57 as seed ortholog is 99%.
Bootstrap support for A3LW98 as seed ortholog is 100%.

Group of orthologs #623. Best score 270 bits
Score difference with first non-orthologous sequence - L.chalumnae:224 S.stipitis:270

H2ZYR2              	100.00%		A3LS11              	100.00%
H3B516              	41.67%		
Bootstrap support for H2ZYR2 as seed ortholog is 100%.
Bootstrap support for A3LS11 as seed ortholog is 100%.

Group of orthologs #624. Best score 270 bits
Score difference with first non-orthologous sequence - L.chalumnae:206 S.stipitis:188

H3A7U7              	100.00%		A3LQT9              	100.00%
Bootstrap support for H3A7U7 as seed ortholog is 100%.
Bootstrap support for A3LQT9 as seed ortholog is 100%.

Group of orthologs #625. Best score 270 bits
Score difference with first non-orthologous sequence - L.chalumnae:270 S.stipitis:270

H3AK09              	100.00%		A3LP82              	100.00%
Bootstrap support for H3AK09 as seed ortholog is 100%.
Bootstrap support for A3LP82 as seed ortholog is 100%.

Group of orthologs #626. Best score 270 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 S.stipitis:58

H3AHU7              	100.00%		A3LWH3              	100.00%
Bootstrap support for H3AHU7 as seed ortholog is 99%.
Bootstrap support for A3LWH3 as seed ortholog is 87%.

Group of orthologs #627. Best score 270 bits
Score difference with first non-orthologous sequence - L.chalumnae:270 S.stipitis:270

H3B664              	100.00%		A3LTD1              	100.00%
Bootstrap support for H3B664 as seed ortholog is 100%.
Bootstrap support for A3LTD1 as seed ortholog is 100%.

Group of orthologs #628. Best score 270 bits
Score difference with first non-orthologous sequence - L.chalumnae:270 S.stipitis:270

H3B323              	100.00%		A3LWK3              	100.00%
Bootstrap support for H3B323 as seed ortholog is 100%.
Bootstrap support for A3LWK3 as seed ortholog is 100%.

Group of orthologs #629. Best score 270 bits
Score difference with first non-orthologous sequence - L.chalumnae:270 S.stipitis:270

H3BHX9              	100.00%		A3LY31              	100.00%
Bootstrap support for H3BHX9 as seed ortholog is 100%.
Bootstrap support for A3LY31 as seed ortholog is 100%.

Group of orthologs #630. Best score 269 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 S.stipitis:269

H3BBD3              	100.00%		A3LTM2              	100.00%
H3A5L1              	34.70%		
Bootstrap support for H3BBD3 as seed ortholog is 92%.
Bootstrap support for A3LTM2 as seed ortholog is 100%.

Group of orthologs #631. Best score 268 bits
Score difference with first non-orthologous sequence - L.chalumnae:122 S.stipitis:182

H3ARC4              	100.00%		A3LMS4              	100.00%
H3A1I1              	85.33%		
H3AU68              	84.09%		
Bootstrap support for H3ARC4 as seed ortholog is 99%.
Bootstrap support for A3LMS4 as seed ortholog is 99%.

Group of orthologs #632. Best score 268 bits
Score difference with first non-orthologous sequence - L.chalumnae:268 S.stipitis:146

H3A3Z0              	100.00%		A3LPP5              	100.00%
H3AIS8              	57.51%		
Bootstrap support for H3A3Z0 as seed ortholog is 100%.
Bootstrap support for A3LPP5 as seed ortholog is 99%.

Group of orthologs #633. Best score 268 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 S.stipitis:135

H2ZTZ0              	100.00%		A3GFE9              	100.00%
Bootstrap support for H2ZTZ0 as seed ortholog is 98%.
Bootstrap support for A3GFE9 as seed ortholog is 99%.

Group of orthologs #634. Best score 268 bits
Score difference with first non-orthologous sequence - L.chalumnae:268 S.stipitis:268

H2ZU07              	100.00%		A3LPU5              	100.00%
Bootstrap support for H2ZU07 as seed ortholog is 100%.
Bootstrap support for A3LPU5 as seed ortholog is 100%.

Group of orthologs #635. Best score 268 bits
Score difference with first non-orthologous sequence - L.chalumnae:268 S.stipitis:268

H3AAR1              	100.00%		A3GHZ3              	100.00%
Bootstrap support for H3AAR1 as seed ortholog is 100%.
Bootstrap support for A3GHZ3 as seed ortholog is 100%.

Group of orthologs #636. Best score 267 bits
Score difference with first non-orthologous sequence - L.chalumnae:267 S.stipitis:267

H3B346              	100.00%		A3LS44              	100.00%
Bootstrap support for H3B346 as seed ortholog is 100%.
Bootstrap support for A3LS44 as seed ortholog is 100%.

Group of orthologs #637. Best score 267 bits
Score difference with first non-orthologous sequence - L.chalumnae:267 S.stipitis:129

H3BFX6              	100.00%		A3LW51              	100.00%
Bootstrap support for H3BFX6 as seed ortholog is 100%.
Bootstrap support for A3LW51 as seed ortholog is 99%.

Group of orthologs #638. Best score 266 bits
Score difference with first non-orthologous sequence - L.chalumnae:266 S.stipitis:266

H3B6A3              	100.00%		A3LT77              	100.00%
Bootstrap support for H3B6A3 as seed ortholog is 100%.
Bootstrap support for A3LT77 as seed ortholog is 100%.

Group of orthologs #639. Best score 266 bits
Score difference with first non-orthologous sequence - L.chalumnae:266 S.stipitis:266

H3BHH6              	100.00%		A3LW04              	100.00%
Bootstrap support for H3BHH6 as seed ortholog is 100%.
Bootstrap support for A3LW04 as seed ortholog is 100%.

Group of orthologs #640. Best score 265 bits
Score difference with first non-orthologous sequence - L.chalumnae:19 S.stipitis:80

H3BAF3              	100.00%		A3LR48              	100.00%
H3B6J5              	27.56%		A3GI90              	15.01%
Bootstrap support for H3BAF3 as seed ortholog is 64%.
Alternative seed ortholog is H3AEP4 (19 bits away from this cluster)
Bootstrap support for A3LR48 as seed ortholog is 97%.

Group of orthologs #641. Best score 265 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 S.stipitis:49

M3XHE1              	100.00%		A3LV96              	100.00%
H2ZZY5              	47.14%		
Bootstrap support for M3XHE1 as seed ortholog is 96%.
Bootstrap support for A3LV96 as seed ortholog is 81%.

Group of orthologs #642. Best score 265 bits
Score difference with first non-orthologous sequence - L.chalumnae:27 S.stipitis:265

H3B2Q0              	100.00%		A3GGK7              	100.00%
Bootstrap support for H3B2Q0 as seed ortholog is 55%.
Alternative seed ortholog is H2ZUK3 (27 bits away from this cluster)
Bootstrap support for A3GGK7 as seed ortholog is 100%.

Group of orthologs #643. Best score 264 bits
Score difference with first non-orthologous sequence - L.chalumnae:264 S.stipitis:264

H3A313              	100.00%		A3GHP9              	100.00%
H3AG95              	51.33%		
Bootstrap support for H3A313 as seed ortholog is 100%.
Bootstrap support for A3GHP9 as seed ortholog is 100%.

Group of orthologs #644. Best score 264 bits
Score difference with first non-orthologous sequence - L.chalumnae:142 S.stipitis:264

H3A3U5              	100.00%		A3LZ81              	100.00%
Bootstrap support for H3A3U5 as seed ortholog is 99%.
Bootstrap support for A3LZ81 as seed ortholog is 100%.

Group of orthologs #645. Best score 264 bits
Score difference with first non-orthologous sequence - L.chalumnae:264 S.stipitis:264

H3AV89              	100.00%		A3LN57              	100.00%
Bootstrap support for H3AV89 as seed ortholog is 100%.
Bootstrap support for A3LN57 as seed ortholog is 100%.

Group of orthologs #646. Best score 264 bits
Score difference with first non-orthologous sequence - L.chalumnae:264 S.stipitis:264

H3AWI5              	100.00%		A3LTI0              	100.00%
Bootstrap support for H3AWI5 as seed ortholog is 100%.
Bootstrap support for A3LTI0 as seed ortholog is 100%.

Group of orthologs #647. Best score 264 bits
Score difference with first non-orthologous sequence - L.chalumnae:264 S.stipitis:264

M3XH26              	100.00%		A3GI60              	100.00%
Bootstrap support for M3XH26 as seed ortholog is 100%.
Bootstrap support for A3GI60 as seed ortholog is 100%.

Group of orthologs #648. Best score 264 bits
Score difference with first non-orthologous sequence - L.chalumnae:264 S.stipitis:264

M3XJU4              	100.00%		A3LQ27              	100.00%
Bootstrap support for M3XJU4 as seed ortholog is 100%.
Bootstrap support for A3LQ27 as seed ortholog is 100%.

Group of orthologs #649. Best score 263 bits
Score difference with first non-orthologous sequence - L.chalumnae:213 S.stipitis:263

H3AVZ1              	100.00%		A3LXY4              	100.00%
H3AUX6              	54.72%		
Bootstrap support for H3AVZ1 as seed ortholog is 100%.
Bootstrap support for A3LXY4 as seed ortholog is 100%.

Group of orthologs #650. Best score 263 bits
Score difference with first non-orthologous sequence - L.chalumnae:263 S.stipitis:263

H2ZSD4              	100.00%		A3LZ16              	100.00%
Bootstrap support for H2ZSD4 as seed ortholog is 100%.
Bootstrap support for A3LZ16 as seed ortholog is 100%.

Group of orthologs #651. Best score 263 bits
Score difference with first non-orthologous sequence - L.chalumnae:263 S.stipitis:263

H3B6W0              	100.00%		A3LWA7              	100.00%
Bootstrap support for H3B6W0 as seed ortholog is 100%.
Bootstrap support for A3LWA7 as seed ortholog is 100%.

Group of orthologs #652. Best score 262 bits
Score difference with first non-orthologous sequence - L.chalumnae:142 S.stipitis:262

H3AQH8              	100.00%		A3LWN5              	100.00%
                    	       		A3LNM1              	76.31%
                    	       		A3LXA2              	74.71%
                    	       		A3LUP5              	70.76%
                    	       		A3GIC0              	58.48%
Bootstrap support for H3AQH8 as seed ortholog is 99%.
Bootstrap support for A3LWN5 as seed ortholog is 100%.

Group of orthologs #653. Best score 262 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 S.stipitis:149

H3ACP8              	100.00%		A3LY99              	100.00%
H3A953              	50.53%		
H2ZZH4              	40.14%		
Bootstrap support for H3ACP8 as seed ortholog is 99%.
Bootstrap support for A3LY99 as seed ortholog is 99%.

Group of orthologs #654. Best score 262 bits
Score difference with first non-orthologous sequence - L.chalumnae:262 S.stipitis:262

H3AVK8              	100.00%		A3GHU3              	100.00%
Bootstrap support for H3AVK8 as seed ortholog is 100%.
Bootstrap support for A3GHU3 as seed ortholog is 100%.

Group of orthologs #655. Best score 262 bits
Score difference with first non-orthologous sequence - L.chalumnae:262 S.stipitis:116

H3B2Z2              	100.00%		A3GID6              	100.00%
Bootstrap support for H3B2Z2 as seed ortholog is 100%.
Bootstrap support for A3GID6 as seed ortholog is 99%.

Group of orthologs #656. Best score 262 bits
Score difference with first non-orthologous sequence - L.chalumnae:156 S.stipitis:188

H3BHL9              	100.00%		A3LW11              	100.00%
Bootstrap support for H3BHL9 as seed ortholog is 100%.
Bootstrap support for A3LW11 as seed ortholog is 100%.

Group of orthologs #657. Best score 261 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 S.stipitis:261

H3A2W5              	100.00%		A3GI83              	100.00%
                    	       		A3GEX0              	21.88%
                    	       		A3LTY9              	21.33%
Bootstrap support for H3A2W5 as seed ortholog is 100%.
Bootstrap support for A3GI83 as seed ortholog is 100%.

Group of orthologs #658. Best score 261 bits
Score difference with first non-orthologous sequence - L.chalumnae:261 S.stipitis:261

H3AX99              	100.00%		A3LPI7              	100.00%
M3XGH3              	42.55%		
Bootstrap support for H3AX99 as seed ortholog is 100%.
Bootstrap support for A3LPI7 as seed ortholog is 100%.

Group of orthologs #659. Best score 261 bits
Score difference with first non-orthologous sequence - L.chalumnae:207 S.stipitis:261

H3AHF7              	100.00%		A3LQF9              	100.00%
Bootstrap support for H3AHF7 as seed ortholog is 100%.
Bootstrap support for A3LQF9 as seed ortholog is 100%.

Group of orthologs #660. Best score 260 bits
Score difference with first non-orthologous sequence - L.chalumnae:150 S.stipitis:260

H3A380              	100.00%		A3LR95              	100.00%
H3BEL1              	55.19%		
Bootstrap support for H3A380 as seed ortholog is 99%.
Bootstrap support for A3LR95 as seed ortholog is 100%.

Group of orthologs #661. Best score 260 bits
Score difference with first non-orthologous sequence - L.chalumnae:260 S.stipitis:260

H3A5V5              	100.00%		A3LPT4              	100.00%
H3AF20              	34.28%		
Bootstrap support for H3A5V5 as seed ortholog is 100%.
Bootstrap support for A3LPT4 as seed ortholog is 100%.

Group of orthologs #662. Best score 260 bits
Score difference with first non-orthologous sequence - L.chalumnae:260 S.stipitis:260

H3APV3              	100.00%		A3LNI3              	100.00%
H3A8L0              	6.98%		
Bootstrap support for H3APV3 as seed ortholog is 100%.
Bootstrap support for A3LNI3 as seed ortholog is 100%.

Group of orthologs #663. Best score 260 bits
Score difference with first non-orthologous sequence - L.chalumnae:260 S.stipitis:260

H3A450              	100.00%		A3LZ98              	100.00%
Bootstrap support for H3A450 as seed ortholog is 100%.
Bootstrap support for A3LZ98 as seed ortholog is 100%.

Group of orthologs #664. Best score 260 bits
Score difference with first non-orthologous sequence - L.chalumnae:260 S.stipitis:260

H3A597              	100.00%		A3LYE8              	100.00%
Bootstrap support for H3A597 as seed ortholog is 100%.
Bootstrap support for A3LYE8 as seed ortholog is 100%.

Group of orthologs #665. Best score 260 bits
Score difference with first non-orthologous sequence - L.chalumnae:260 S.stipitis:260

H3AT34              	100.00%		A3LVC9              	100.00%
Bootstrap support for H3AT34 as seed ortholog is 100%.
Bootstrap support for A3LVC9 as seed ortholog is 100%.

Group of orthologs #666. Best score 260 bits
Score difference with first non-orthologous sequence - L.chalumnae:260 S.stipitis:260

H3B063              	100.00%		A3LS43              	100.00%
Bootstrap support for H3B063 as seed ortholog is 100%.
Bootstrap support for A3LS43 as seed ortholog is 100%.

Group of orthologs #667. Best score 259 bits
Score difference with first non-orthologous sequence - L.chalumnae:259 S.stipitis:81

H3B5R5              	100.00%		A3LN94              	100.00%
H3BB55              	33.21%		
H3B391              	16.23%		
Bootstrap support for H3B5R5 as seed ortholog is 100%.
Bootstrap support for A3LN94 as seed ortholog is 99%.

Group of orthologs #668. Best score 259 bits
Score difference with first non-orthologous sequence - L.chalumnae:259 S.stipitis:259

H2ZUV3              	100.00%		A3LT27              	100.00%
H3B9Z1              	37.53%		
Bootstrap support for H2ZUV3 as seed ortholog is 100%.
Bootstrap support for A3LT27 as seed ortholog is 100%.

Group of orthologs #669. Best score 259 bits
Score difference with first non-orthologous sequence - L.chalumnae:259 S.stipitis:259

H2ZV09              	100.00%		A3GGL1              	100.00%
Bootstrap support for H2ZV09 as seed ortholog is 100%.
Bootstrap support for A3GGL1 as seed ortholog is 100%.

Group of orthologs #670. Best score 259 bits
Score difference with first non-orthologous sequence - L.chalumnae:259 S.stipitis:21

H2ZYY0              	100.00%		P22144              	100.00%
Bootstrap support for H2ZYY0 as seed ortholog is 100%.
Bootstrap support for P22144 as seed ortholog is 67%.
Alternative seed ortholog is A3GIE9 (21 bits away from this cluster)

Group of orthologs #671. Best score 259 bits
Score difference with first non-orthologous sequence - L.chalumnae:259 S.stipitis:259

H3AHH4              	100.00%		A3LUB1              	100.00%
Bootstrap support for H3AHH4 as seed ortholog is 100%.
Bootstrap support for A3LUB1 as seed ortholog is 100%.

Group of orthologs #672. Best score 258 bits
Score difference with first non-orthologous sequence - L.chalumnae:184 S.stipitis:258

H2ZXF8              	100.00%		A3LYA3              	100.00%
Bootstrap support for H2ZXF8 as seed ortholog is 100%.
Bootstrap support for A3LYA3 as seed ortholog is 100%.

Group of orthologs #673. Best score 258 bits
Score difference with first non-orthologous sequence - L.chalumnae:258 S.stipitis:258

H3AFA6              	100.00%		A3GF74              	100.00%
Bootstrap support for H3AFA6 as seed ortholog is 100%.
Bootstrap support for A3GF74 as seed ortholog is 100%.

Group of orthologs #674. Best score 257 bits
Score difference with first non-orthologous sequence - L.chalumnae:257 S.stipitis:257

H3ACS3              	100.00%		A3LST9              	100.00%
                    	       		A3LZ17              	33.28%
                    	       		A3LZ45              	18.27%
Bootstrap support for H3ACS3 as seed ortholog is 100%.
Bootstrap support for A3LST9 as seed ortholog is 100%.

Group of orthologs #675. Best score 257 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 S.stipitis:108

H3AY68              	100.00%		A3GI29              	100.00%
H3B476              	47.67%		
H2ZZJ0              	22.07%		
Bootstrap support for H3AY68 as seed ortholog is 99%.
Bootstrap support for A3GI29 as seed ortholog is 99%.

Group of orthologs #676. Best score 257 bits
Score difference with first non-orthologous sequence - L.chalumnae:257 S.stipitis:257

H2ZYK7              	100.00%		A3GEY7              	100.00%
Bootstrap support for H2ZYK7 as seed ortholog is 100%.
Bootstrap support for A3GEY7 as seed ortholog is 100%.

Group of orthologs #677. Best score 257 bits
Score difference with first non-orthologous sequence - L.chalumnae:209 S.stipitis:257

H2ZZG1              	100.00%		A3LTL4              	100.00%
Bootstrap support for H2ZZG1 as seed ortholog is 100%.
Bootstrap support for A3LTL4 as seed ortholog is 100%.

Group of orthologs #678. Best score 257 bits
Score difference with first non-orthologous sequence - L.chalumnae:257 S.stipitis:257

H3AB87              	100.00%		A3LP59              	100.00%
Bootstrap support for H3AB87 as seed ortholog is 100%.
Bootstrap support for A3LP59 as seed ortholog is 100%.

Group of orthologs #679. Best score 255 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 S.stipitis:255

H2ZSG1              	100.00%		A3LQG1              	100.00%
Bootstrap support for H2ZSG1 as seed ortholog is 89%.
Bootstrap support for A3LQG1 as seed ortholog is 100%.

Group of orthologs #680. Best score 255 bits
Score difference with first non-orthologous sequence - L.chalumnae:255 S.stipitis:186

H3ANJ8              	100.00%		A3GG29              	100.00%
Bootstrap support for H3ANJ8 as seed ortholog is 100%.
Bootstrap support for A3GG29 as seed ortholog is 100%.

Group of orthologs #681. Best score 255 bits
Score difference with first non-orthologous sequence - L.chalumnae:255 S.stipitis:255

H3ANH2              	100.00%		A3LTY5              	100.00%
Bootstrap support for H3ANH2 as seed ortholog is 100%.
Bootstrap support for A3LTY5 as seed ortholog is 100%.

Group of orthologs #682. Best score 255 bits
Score difference with first non-orthologous sequence - L.chalumnae:35 S.stipitis:177

H3BE64              	100.00%		A3LTB4              	100.00%
Bootstrap support for H3BE64 as seed ortholog is 78%.
Bootstrap support for A3LTB4 as seed ortholog is 99%.

Group of orthologs #683. Best score 254 bits
Score difference with first non-orthologous sequence - L.chalumnae:254 S.stipitis:254

H2ZT65              	100.00%		A3LPJ7              	100.00%
Bootstrap support for H2ZT65 as seed ortholog is 100%.
Bootstrap support for A3LPJ7 as seed ortholog is 100%.

Group of orthologs #684. Best score 254 bits
Score difference with first non-orthologous sequence - L.chalumnae:22 S.stipitis:149

H3A7H1              	100.00%		A3GGX4              	100.00%
Bootstrap support for H3A7H1 as seed ortholog is 88%.
Bootstrap support for A3GGX4 as seed ortholog is 100%.

Group of orthologs #685. Best score 254 bits
Score difference with first non-orthologous sequence - L.chalumnae:254 S.stipitis:254

H3APH1              	100.00%		A3LZT5              	100.00%
Bootstrap support for H3APH1 as seed ortholog is 100%.
Bootstrap support for A3LZT5 as seed ortholog is 100%.

Group of orthologs #686. Best score 254 bits
Score difference with first non-orthologous sequence - L.chalumnae:254 S.stipitis:254

H3BGJ4              	100.00%		A3LTN2              	100.00%
Bootstrap support for H3BGJ4 as seed ortholog is 100%.
Bootstrap support for A3LTN2 as seed ortholog is 100%.

Group of orthologs #687. Best score 253 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 S.stipitis:129

H3AF51              	100.00%		A3M0D7              	100.00%
H3BAV6              	23.11%		
Bootstrap support for H3AF51 as seed ortholog is 99%.
Bootstrap support for A3M0D7 as seed ortholog is 99%.

Group of orthologs #688. Best score 253 bits
Score difference with first non-orthologous sequence - L.chalumnae:253 S.stipitis:253

H3BIG8              	100.00%		A3LNS0              	100.00%
H3AR22              	22.04%		
Bootstrap support for H3BIG8 as seed ortholog is 100%.
Bootstrap support for A3LNS0 as seed ortholog is 100%.

Group of orthologs #689. Best score 253 bits
Score difference with first non-orthologous sequence - L.chalumnae:253 S.stipitis:253

H2ZWG3              	100.00%		A3LT07              	100.00%
Bootstrap support for H2ZWG3 as seed ortholog is 100%.
Bootstrap support for A3LT07 as seed ortholog is 100%.

Group of orthologs #690. Best score 253 bits
Score difference with first non-orthologous sequence - L.chalumnae:253 S.stipitis:253

H2ZYU5              	100.00%		A3LVG8              	100.00%
Bootstrap support for H2ZYU5 as seed ortholog is 100%.
Bootstrap support for A3LVG8 as seed ortholog is 100%.

Group of orthologs #691. Best score 252 bits
Score difference with first non-orthologous sequence - L.chalumnae:252 S.stipitis:252

H3A765              	100.00%		A3GFS6              	100.00%
H3B0S2              	36.74%		
Bootstrap support for H3A765 as seed ortholog is 100%.
Bootstrap support for A3GFS6 as seed ortholog is 100%.

Group of orthologs #692. Best score 252 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 S.stipitis:252

H3BHG4              	100.00%		A3GI79              	100.00%
H3B1F4              	41.59%		
Bootstrap support for H3BHG4 as seed ortholog is 100%.
Bootstrap support for A3GI79 as seed ortholog is 100%.

Group of orthologs #693. Best score 252 bits
Score difference with first non-orthologous sequence - L.chalumnae:252 S.stipitis:252

H2ZSL4              	100.00%		A3GF78              	100.00%
Bootstrap support for H2ZSL4 as seed ortholog is 100%.
Bootstrap support for A3GF78 as seed ortholog is 100%.

Group of orthologs #694. Best score 252 bits
Score difference with first non-orthologous sequence - L.chalumnae:252 S.stipitis:252

H3A7I4              	100.00%		A3GI99              	100.00%
Bootstrap support for H3A7I4 as seed ortholog is 100%.
Bootstrap support for A3GI99 as seed ortholog is 100%.

Group of orthologs #695. Best score 252 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 S.stipitis:252

H3AGA7              	100.00%		A3LZL7              	100.00%
Bootstrap support for H3AGA7 as seed ortholog is 100%.
Bootstrap support for A3LZL7 as seed ortholog is 100%.

Group of orthologs #696. Best score 252 bits
Score difference with first non-orthologous sequence - L.chalumnae:252 S.stipitis:252

H3AZL7              	100.00%		A3GH69              	100.00%
Bootstrap support for H3AZL7 as seed ortholog is 100%.
Bootstrap support for A3GH69 as seed ortholog is 100%.

Group of orthologs #697. Best score 252 bits
Score difference with first non-orthologous sequence - L.chalumnae:155 S.stipitis:252

H3B444              	100.00%		A3GFE2              	100.00%
Bootstrap support for H3B444 as seed ortholog is 100%.
Bootstrap support for A3GFE2 as seed ortholog is 100%.

Group of orthologs #698. Best score 252 bits
Score difference with first non-orthologous sequence - L.chalumnae:252 S.stipitis:252

H3BGW8              	100.00%		A3LX09              	100.00%
Bootstrap support for H3BGW8 as seed ortholog is 100%.
Bootstrap support for A3LX09 as seed ortholog is 100%.

Group of orthologs #699. Best score 251 bits
Score difference with first non-orthologous sequence - L.chalumnae:251 S.stipitis:98

H3A217              	100.00%		A3LNB9              	100.00%
Bootstrap support for H3A217 as seed ortholog is 100%.
Bootstrap support for A3LNB9 as seed ortholog is 93%.

Group of orthologs #700. Best score 251 bits
Score difference with first non-orthologous sequence - L.chalumnae:251 S.stipitis:251

H3B832              	100.00%		A3GEZ2              	100.00%
Bootstrap support for H3B832 as seed ortholog is 100%.
Bootstrap support for A3GEZ2 as seed ortholog is 100%.

Group of orthologs #701. Best score 251 bits
Score difference with first non-orthologous sequence - L.chalumnae:251 S.stipitis:251

H3B1D7              	100.00%		A3LT55              	100.00%
Bootstrap support for H3B1D7 as seed ortholog is 100%.
Bootstrap support for A3LT55 as seed ortholog is 100%.

Group of orthologs #702. Best score 251 bits
Score difference with first non-orthologous sequence - L.chalumnae:40 S.stipitis:1

H3BBX6              	100.00%		A3GG57              	100.00%
Bootstrap support for H3BBX6 as seed ortholog is 85%.
Bootstrap support for A3GG57 as seed ortholog is 53%.
Alternative seed ortholog is A3LUH2 (1 bits away from this cluster)

Group of orthologs #703. Best score 250 bits
Score difference with first non-orthologous sequence - L.chalumnae:250 S.stipitis:250

H2ZWA3              	100.00%		A3GF95              	100.00%
H3ATM2              	54.77%		
H3AZ43              	31.97%		
H3B9Y7              	29.86%		
Bootstrap support for H2ZWA3 as seed ortholog is 100%.
Bootstrap support for A3GF95 as seed ortholog is 100%.

Group of orthologs #704. Best score 250 bits
Score difference with first non-orthologous sequence - L.chalumnae:250 S.stipitis:250

H3A1U1              	100.00%		A3LU49              	100.00%
Bootstrap support for H3A1U1 as seed ortholog is 100%.
Bootstrap support for A3LU49 as seed ortholog is 100%.

Group of orthologs #705. Best score 250 bits
Score difference with first non-orthologous sequence - L.chalumnae:250 S.stipitis:250

H3APT1              	100.00%		A3LTD9              	100.00%
Bootstrap support for H3APT1 as seed ortholog is 100%.
Bootstrap support for A3LTD9 as seed ortholog is 100%.

Group of orthologs #706. Best score 250 bits
Score difference with first non-orthologous sequence - L.chalumnae:250 S.stipitis:250

H3AQL2              	100.00%		A3LVZ0              	100.00%
Bootstrap support for H3AQL2 as seed ortholog is 100%.
Bootstrap support for A3LVZ0 as seed ortholog is 100%.

Group of orthologs #707. Best score 249 bits
Score difference with first non-orthologous sequence - L.chalumnae:184 S.stipitis:249

H3B744              	100.00%		A3LUM6              	100.00%
H3AMZ6              	42.50%		
Bootstrap support for H3B744 as seed ortholog is 99%.
Bootstrap support for A3LUM6 as seed ortholog is 100%.

Group of orthologs #708. Best score 249 bits
Score difference with first non-orthologous sequence - L.chalumnae:249 S.stipitis:249

H3ANN4              	100.00%		A3LMS2              	100.00%
Bootstrap support for H3ANN4 as seed ortholog is 100%.
Bootstrap support for A3LMS2 as seed ortholog is 100%.

Group of orthologs #709. Best score 249 bits
Score difference with first non-orthologous sequence - L.chalumnae:249 S.stipitis:249

H3AUP8              	100.00%		A3LWM6              	100.00%
Bootstrap support for H3AUP8 as seed ortholog is 100%.
Bootstrap support for A3LWM6 as seed ortholog is 100%.

Group of orthologs #710. Best score 248 bits
Score difference with first non-orthologous sequence - L.chalumnae:248 S.stipitis:248

H3BGZ8              	100.00%		A3LT93              	100.00%
H3B8J2              	25.39%		
Bootstrap support for H3BGZ8 as seed ortholog is 100%.
Bootstrap support for A3LT93 as seed ortholog is 100%.

Group of orthologs #711. Best score 248 bits
Score difference with first non-orthologous sequence - L.chalumnae:248 S.stipitis:248

H3A5P1              	100.00%		A3LPU9              	100.00%
Bootstrap support for H3A5P1 as seed ortholog is 100%.
Bootstrap support for A3LPU9 as seed ortholog is 100%.

Group of orthologs #712. Best score 248 bits
Score difference with first non-orthologous sequence - L.chalumnae:248 S.stipitis:248

H3B1T9              	100.00%		A3LRW9              	100.00%
Bootstrap support for H3B1T9 as seed ortholog is 100%.
Bootstrap support for A3LRW9 as seed ortholog is 100%.

Group of orthologs #713. Best score 248 bits
Score difference with first non-orthologous sequence - L.chalumnae:248 S.stipitis:108

H3BB22              	100.00%		A3LS53              	100.00%
Bootstrap support for H3BB22 as seed ortholog is 100%.
Bootstrap support for A3LS53 as seed ortholog is 99%.

Group of orthologs #714. Best score 248 bits
Score difference with first non-orthologous sequence - L.chalumnae:248 S.stipitis:248

H3BB46              	100.00%		A3LYF6              	100.00%
Bootstrap support for H3BB46 as seed ortholog is 100%.
Bootstrap support for A3LYF6 as seed ortholog is 100%.

Group of orthologs #715. Best score 248 bits
Score difference with first non-orthologous sequence - L.chalumnae:248 S.stipitis:248

H3BF19              	100.00%		A3LVB0              	100.00%
Bootstrap support for H3BF19 as seed ortholog is 100%.
Bootstrap support for A3LVB0 as seed ortholog is 100%.

Group of orthologs #716. Best score 247 bits
Score difference with first non-orthologous sequence - L.chalumnae:43 S.stipitis:106

H3A4Q6              	100.00%		A3LXD5              	100.00%
H3B1Y8              	61.11%		A3GHN6              	56.25%
Bootstrap support for H3A4Q6 as seed ortholog is 99%.
Bootstrap support for A3LXD5 as seed ortholog is 100%.

Group of orthologs #717. Best score 247 bits
Score difference with first non-orthologous sequence - L.chalumnae:247 S.stipitis:170

H3B0A8              	100.00%		A3GI66              	100.00%
Bootstrap support for H3B0A8 as seed ortholog is 100%.
Bootstrap support for A3GI66 as seed ortholog is 99%.

Group of orthologs #718. Best score 247 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 S.stipitis:109

H3ASR1              	100.00%		A3LZN6              	100.00%
Bootstrap support for H3ASR1 as seed ortholog is 95%.
Bootstrap support for A3LZN6 as seed ortholog is 99%.

Group of orthologs #719. Best score 247 bits
Score difference with first non-orthologous sequence - L.chalumnae:247 S.stipitis:113

H3B7X9              	100.00%		A3LNS1              	100.00%
Bootstrap support for H3B7X9 as seed ortholog is 100%.
Bootstrap support for A3LNS1 as seed ortholog is 99%.

Group of orthologs #720. Best score 247 bits
Score difference with first non-orthologous sequence - L.chalumnae:247 S.stipitis:247

H3B3T1              	100.00%		A3LXR8              	100.00%
Bootstrap support for H3B3T1 as seed ortholog is 100%.
Bootstrap support for A3LXR8 as seed ortholog is 100%.

Group of orthologs #721. Best score 246 bits
Score difference with first non-orthologous sequence - L.chalumnae:246 S.stipitis:246

H3A9M3              	100.00%		A3LVM5              	100.00%
Bootstrap support for H3A9M3 as seed ortholog is 100%.
Bootstrap support for A3LVM5 as seed ortholog is 100%.

Group of orthologs #722. Best score 246 bits
Score difference with first non-orthologous sequence - L.chalumnae:246 S.stipitis:246

H3ARF9              	100.00%		A3LPW9              	100.00%
Bootstrap support for H3ARF9 as seed ortholog is 100%.
Bootstrap support for A3LPW9 as seed ortholog is 100%.

Group of orthologs #723. Best score 246 bits
Score difference with first non-orthologous sequence - L.chalumnae:246 S.stipitis:246

H3ASP7              	100.00%		A3LX03              	100.00%
Bootstrap support for H3ASP7 as seed ortholog is 100%.
Bootstrap support for A3LX03 as seed ortholog is 100%.

Group of orthologs #724. Best score 246 bits
Score difference with first non-orthologous sequence - L.chalumnae:246 S.stipitis:246

H3B2S1              	100.00%		A3LTK4              	100.00%
Bootstrap support for H3B2S1 as seed ortholog is 100%.
Bootstrap support for A3LTK4 as seed ortholog is 100%.

Group of orthologs #725. Best score 246 bits
Score difference with first non-orthologous sequence - L.chalumnae:246 S.stipitis:246

H3BEB0              	100.00%		A3LNS4              	100.00%
Bootstrap support for H3BEB0 as seed ortholog is 100%.
Bootstrap support for A3LNS4 as seed ortholog is 100%.

Group of orthologs #726. Best score 245 bits
Score difference with first non-orthologous sequence - L.chalumnae:245 S.stipitis:245

H3A081              	100.00%		A3LMX0              	100.00%
Bootstrap support for H3A081 as seed ortholog is 100%.
Bootstrap support for A3LMX0 as seed ortholog is 100%.

Group of orthologs #727. Best score 245 bits
Score difference with first non-orthologous sequence - L.chalumnae:245 S.stipitis:245

H3A2U3              	100.00%		A3LUL0              	100.00%
Bootstrap support for H3A2U3 as seed ortholog is 100%.
Bootstrap support for A3LUL0 as seed ortholog is 100%.

Group of orthologs #728. Best score 245 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 S.stipitis:245

H3AN65              	100.00%		A3LUZ2              	100.00%
Bootstrap support for H3AN65 as seed ortholog is 99%.
Bootstrap support for A3LUZ2 as seed ortholog is 100%.

Group of orthologs #729. Best score 245 bits
Score difference with first non-orthologous sequence - L.chalumnae:154 S.stipitis:167

H3B9G3              	100.00%		A3GGZ4              	100.00%
Bootstrap support for H3B9G3 as seed ortholog is 99%.
Bootstrap support for A3GGZ4 as seed ortholog is 99%.

Group of orthologs #730. Best score 245 bits
Score difference with first non-orthologous sequence - L.chalumnae:153 S.stipitis:133

H3BFN2              	100.00%		A3LNI7              	100.00%
Bootstrap support for H3BFN2 as seed ortholog is 99%.
Bootstrap support for A3LNI7 as seed ortholog is 99%.

Group of orthologs #731. Best score 244 bits
Score difference with first non-orthologous sequence - L.chalumnae:244 S.stipitis:244

H3A0A8              	100.00%		A3LVK2              	100.00%
H3BHW4              	95.29%		
Bootstrap support for H3A0A8 as seed ortholog is 100%.
Bootstrap support for A3LVK2 as seed ortholog is 100%.

Group of orthologs #732. Best score 244 bits
Score difference with first non-orthologous sequence - L.chalumnae:244 S.stipitis:244

H3AM99              	100.00%		A3GF08              	100.00%
Bootstrap support for H3AM99 as seed ortholog is 100%.
Bootstrap support for A3GF08 as seed ortholog is 100%.

Group of orthologs #733. Best score 244 bits
Score difference with first non-orthologous sequence - L.chalumnae:244 S.stipitis:244

H3AP09              	100.00%		A3GGN0              	100.00%
Bootstrap support for H3AP09 as seed ortholog is 100%.
Bootstrap support for A3GGN0 as seed ortholog is 100%.

Group of orthologs #734. Best score 244 bits
Score difference with first non-orthologous sequence - L.chalumnae:244 S.stipitis:244

M3XIA9              	100.00%		A3LRF5              	100.00%
Bootstrap support for M3XIA9 as seed ortholog is 100%.
Bootstrap support for A3LRF5 as seed ortholog is 100%.

Group of orthologs #735. Best score 243 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 S.stipitis:243

H3A6A2              	100.00%		A3LYF2              	100.00%
Bootstrap support for H3A6A2 as seed ortholog is 100%.
Bootstrap support for A3LYF2 as seed ortholog is 100%.

Group of orthologs #736. Best score 243 bits
Score difference with first non-orthologous sequence - L.chalumnae:243 S.stipitis:243

H3ACR5              	100.00%		A3LT92              	100.00%
Bootstrap support for H3ACR5 as seed ortholog is 100%.
Bootstrap support for A3LT92 as seed ortholog is 100%.

Group of orthologs #737. Best score 242 bits
Score difference with first non-orthologous sequence - L.chalumnae:242 S.stipitis:242

H3AQY9              	100.00%		A3GHN5              	100.00%
Bootstrap support for H3AQY9 as seed ortholog is 100%.
Bootstrap support for A3GHN5 as seed ortholog is 100%.

Group of orthologs #738. Best score 241 bits
Score difference with first non-orthologous sequence - L.chalumnae:241 S.stipitis:241

H3A915              	100.00%		A3LR93              	100.00%
Bootstrap support for H3A915 as seed ortholog is 100%.
Bootstrap support for A3LR93 as seed ortholog is 100%.

Group of orthologs #739. Best score 240 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 S.stipitis:160

M3XKY0              	100.00%		A3LPZ8              	100.00%
H3B5K1              	16.29%		
H3AJV5              	15.01%		
Bootstrap support for M3XKY0 as seed ortholog is 99%.
Bootstrap support for A3LPZ8 as seed ortholog is 100%.

Group of orthologs #740. Best score 240 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 S.stipitis:240

H2ZZ08              	100.00%		A3LVL3              	100.00%
Bootstrap support for H2ZZ08 as seed ortholog is 92%.
Bootstrap support for A3LVL3 as seed ortholog is 100%.

Group of orthologs #741. Best score 240 bits
Score difference with first non-orthologous sequence - L.chalumnae:240 S.stipitis:196

H3AQ76              	100.00%		A3GFF1              	100.00%
Bootstrap support for H3AQ76 as seed ortholog is 100%.
Bootstrap support for A3GFF1 as seed ortholog is 99%.

Group of orthologs #742. Best score 240 bits
Score difference with first non-orthologous sequence - L.chalumnae:240 S.stipitis:240

H3B831              	100.00%		A3LP89              	100.00%
Bootstrap support for H3B831 as seed ortholog is 100%.
Bootstrap support for A3LP89 as seed ortholog is 100%.

Group of orthologs #743. Best score 239 bits
Score difference with first non-orthologous sequence - L.chalumnae:239 S.stipitis:239

H3B466              	100.00%		A3LPZ2              	100.00%
H3BEE7              	49.77%		
Bootstrap support for H3B466 as seed ortholog is 100%.
Bootstrap support for A3LPZ2 as seed ortholog is 100%.

Group of orthologs #744. Best score 239 bits
Score difference with first non-orthologous sequence - L.chalumnae:239 S.stipitis:239

H3AQC9              	100.00%		A3GGW7              	100.00%
Bootstrap support for H3AQC9 as seed ortholog is 100%.
Bootstrap support for A3GGW7 as seed ortholog is 100%.

Group of orthologs #745. Best score 238 bits
Score difference with first non-orthologous sequence - L.chalumnae:95 S.stipitis:125

H3B1V4              	100.00%		A3LXT6              	100.00%
H3A850              	59.67%		
H3AFA5              	53.04%		
Bootstrap support for H3B1V4 as seed ortholog is 99%.
Bootstrap support for A3LXT6 as seed ortholog is 99%.

Group of orthologs #746. Best score 238 bits
Score difference with first non-orthologous sequence - L.chalumnae:46 S.stipitis:63

H3A696              	100.00%		A3LUB9              	100.00%
H3BFG6              	27.83%		
Bootstrap support for H3A696 as seed ortholog is 88%.
Bootstrap support for A3LUB9 as seed ortholog is 95%.

Group of orthologs #747. Best score 238 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 S.stipitis:131

H3AWA9              	100.00%		A3LV89              	100.00%
H3ABH0              	24.71%		
Bootstrap support for H3AWA9 as seed ortholog is 97%.
Bootstrap support for A3LV89 as seed ortholog is 100%.

Group of orthologs #748. Best score 237 bits
Score difference with first non-orthologous sequence - L.chalumnae:237 S.stipitis:237

H3B3U1              	100.00%		A3GHI8              	100.00%
Bootstrap support for H3B3U1 as seed ortholog is 100%.
Bootstrap support for A3GHI8 as seed ortholog is 100%.

Group of orthologs #749. Best score 237 bits
Score difference with first non-orthologous sequence - L.chalumnae:237 S.stipitis:237

H3B6D3              	100.00%		A3GHB0              	100.00%
Bootstrap support for H3B6D3 as seed ortholog is 100%.
Bootstrap support for A3GHB0 as seed ortholog is 100%.

Group of orthologs #750. Best score 236 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 S.stipitis:140

H3ASI0              	100.00%		A3LU99              	100.00%
H2ZUW2              	49.60%		
H3AY19              	43.77%		
Bootstrap support for H3ASI0 as seed ortholog is 99%.
Bootstrap support for A3LU99 as seed ortholog is 99%.

Group of orthologs #751. Best score 236 bits
Score difference with first non-orthologous sequence - L.chalumnae:236 S.stipitis:236

H2ZV74              	100.00%		A3LSS6              	100.00%
H3B1Q4              	17.01%		
Bootstrap support for H2ZV74 as seed ortholog is 100%.
Bootstrap support for A3LSS6 as seed ortholog is 100%.

Group of orthologs #752. Best score 236 bits
Score difference with first non-orthologous sequence - L.chalumnae:236 S.stipitis:236

H3AF57              	100.00%		A3LMY4              	100.00%
Bootstrap support for H3AF57 as seed ortholog is 100%.
Bootstrap support for A3LMY4 as seed ortholog is 100%.

Group of orthologs #753. Best score 236 bits
Score difference with first non-orthologous sequence - L.chalumnae:236 S.stipitis:236

H3BG48              	100.00%		A3LWD9              	100.00%
Bootstrap support for H3BG48 as seed ortholog is 100%.
Bootstrap support for A3LWD9 as seed ortholog is 100%.

Group of orthologs #754. Best score 235 bits
Score difference with first non-orthologous sequence - L.chalumnae:235 S.stipitis:235

H3B406              	100.00%		A3LQ08              	100.00%
H2ZYG0              	5.30%		
Bootstrap support for H3B406 as seed ortholog is 100%.
Bootstrap support for A3LQ08 as seed ortholog is 100%.

Group of orthologs #755. Best score 235 bits
Score difference with first non-orthologous sequence - L.chalumnae:235 S.stipitis:235

H2ZSH0              	100.00%		A3GGJ6              	100.00%
Bootstrap support for H2ZSH0 as seed ortholog is 100%.
Bootstrap support for A3GGJ6 as seed ortholog is 100%.

Group of orthologs #756. Best score 235 bits
Score difference with first non-orthologous sequence - L.chalumnae:235 S.stipitis:235

H3A5Q2              	100.00%		A3LRU7              	100.00%
Bootstrap support for H3A5Q2 as seed ortholog is 100%.
Bootstrap support for A3LRU7 as seed ortholog is 100%.

Group of orthologs #757. Best score 235 bits
Score difference with first non-orthologous sequence - L.chalumnae:235 S.stipitis:235

H3AGH6              	100.00%		A3LTA7              	100.00%
Bootstrap support for H3AGH6 as seed ortholog is 100%.
Bootstrap support for A3LTA7 as seed ortholog is 100%.

Group of orthologs #758. Best score 234 bits
Score difference with first non-orthologous sequence - L.chalumnae:116 S.stipitis:141

H3B917              	100.00%		A3LY45              	100.00%
H3ANU5              	85.37%		
M3XHT1              	85.37%		
Bootstrap support for H3B917 as seed ortholog is 100%.
Bootstrap support for A3LY45 as seed ortholog is 100%.

Group of orthologs #759. Best score 234 bits
Score difference with first non-orthologous sequence - L.chalumnae:234 S.stipitis:234

H2ZSG8              	100.00%		A3LT38              	100.00%
Bootstrap support for H2ZSG8 as seed ortholog is 100%.
Bootstrap support for A3LT38 as seed ortholog is 100%.

Group of orthologs #760. Best score 234 bits
Score difference with first non-orthologous sequence - L.chalumnae:234 S.stipitis:234

H2ZYP3              	100.00%		A3LWW1              	100.00%
Bootstrap support for H2ZYP3 as seed ortholog is 100%.
Bootstrap support for A3LWW1 as seed ortholog is 100%.

Group of orthologs #761. Best score 233 bits
Score difference with first non-orthologous sequence - L.chalumnae:233 S.stipitis:233

H3B1W4              	100.00%		A3GGN4              	100.00%
H3AAP0              	66.67%		
H2ZRP5              	22.56%		
Bootstrap support for H3B1W4 as seed ortholog is 100%.
Bootstrap support for A3GGN4 as seed ortholog is 100%.

Group of orthologs #762. Best score 233 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 S.stipitis:233

H3B8Y2              	100.00%		A3LQJ1              	100.00%
Bootstrap support for H3B8Y2 as seed ortholog is 99%.
Bootstrap support for A3LQJ1 as seed ortholog is 100%.

Group of orthologs #763. Best score 233 bits
Score difference with first non-orthologous sequence - L.chalumnae:233 S.stipitis:233

M3XGI7              	100.00%		A3LTJ3              	100.00%
Bootstrap support for M3XGI7 as seed ortholog is 100%.
Bootstrap support for A3LTJ3 as seed ortholog is 100%.

Group of orthologs #764. Best score 232 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 S.stipitis:129

H3AK24              	100.00%		A3LTR3              	100.00%
H3B7M8              	100.00%		
Bootstrap support for H3AK24 as seed ortholog is 97%.
Bootstrap support for H3B7M8 as seed ortholog is 96%.
Bootstrap support for A3LTR3 as seed ortholog is 99%.

Group of orthologs #765. Best score 232 bits
Score difference with first non-orthologous sequence - L.chalumnae:232 S.stipitis:232

H3AS40              	100.00%		A3GIC9              	100.00%
Bootstrap support for H3AS40 as seed ortholog is 100%.
Bootstrap support for A3GIC9 as seed ortholog is 100%.

Group of orthologs #766. Best score 232 bits
Score difference with first non-orthologous sequence - L.chalumnae:232 S.stipitis:232

H3B751              	100.00%		A3LQK6              	100.00%
Bootstrap support for H3B751 as seed ortholog is 100%.
Bootstrap support for A3LQK6 as seed ortholog is 100%.

Group of orthologs #767. Best score 232 bits
Score difference with first non-orthologous sequence - L.chalumnae:25 S.stipitis:10

M3XKG4              	100.00%		A3GG58              	100.00%
Bootstrap support for M3XKG4 as seed ortholog is 70%.
Alternative seed ortholog is H3AK82 (25 bits away from this cluster)
Bootstrap support for A3GG58 as seed ortholog is 60%.
Alternative seed ortholog is A3GHU5 (10 bits away from this cluster)

Group of orthologs #768. Best score 231 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 S.stipitis:47

H3AAK4              	100.00%		A3LV83              	100.00%
H3BDU0              	20.32%		
Bootstrap support for H3AAK4 as seed ortholog is 99%.
Bootstrap support for A3LV83 as seed ortholog is 93%.

Group of orthologs #769. Best score 231 bits
Score difference with first non-orthologous sequence - L.chalumnae:231 S.stipitis:231

H3AAA4              	100.00%		A3GG94              	100.00%
Bootstrap support for H3AAA4 as seed ortholog is 100%.
Bootstrap support for A3GG94 as seed ortholog is 100%.

Group of orthologs #770. Best score 231 bits
Score difference with first non-orthologous sequence - L.chalumnae:231 S.stipitis:231

H3BC88              	100.00%		A3LQL9              	100.00%
Bootstrap support for H3BC88 as seed ortholog is 100%.
Bootstrap support for A3LQL9 as seed ortholog is 100%.

Group of orthologs #771. Best score 230 bits
Score difference with first non-orthologous sequence - L.chalumnae:230 S.stipitis:230

H3A0E8              	100.00%		A3LX79              	100.00%
H2ZWV6              	42.55%		A3GID3              	18.11%
                    	       		A3LSB0              	15.30%
                    	       		A3LMV7              	15.07%
Bootstrap support for H3A0E8 as seed ortholog is 100%.
Bootstrap support for A3LX79 as seed ortholog is 100%.

Group of orthologs #772. Best score 230 bits
Score difference with first non-orthologous sequence - L.chalumnae:230 S.stipitis:230

H3AFJ8              	100.00%		A3GH07              	100.00%
H3BI20              	38.71%		
H3ARE4              	20.46%		
Bootstrap support for H3AFJ8 as seed ortholog is 100%.
Bootstrap support for A3GH07 as seed ortholog is 100%.

Group of orthologs #773. Best score 230 bits
Score difference with first non-orthologous sequence - L.chalumnae:230 S.stipitis:230

H3A461              	100.00%		A3GG37              	100.00%
Bootstrap support for H3A461 as seed ortholog is 100%.
Bootstrap support for A3GG37 as seed ortholog is 100%.

Group of orthologs #774. Best score 230 bits
Score difference with first non-orthologous sequence - L.chalumnae:230 S.stipitis:230

H3AJA8              	100.00%		A3LNC2              	100.00%
Bootstrap support for H3AJA8 as seed ortholog is 100%.
Bootstrap support for A3LNC2 as seed ortholog is 100%.

Group of orthologs #775. Best score 230 bits
Score difference with first non-orthologous sequence - L.chalumnae:230 S.stipitis:230

H3AD61              	100.00%		A3LUW1              	100.00%
Bootstrap support for H3AD61 as seed ortholog is 100%.
Bootstrap support for A3LUW1 as seed ortholog is 100%.

Group of orthologs #776. Best score 230 bits
Score difference with first non-orthologous sequence - L.chalumnae:230 S.stipitis:230

H3B3L9              	100.00%		A3LNN8              	100.00%
Bootstrap support for H3B3L9 as seed ortholog is 100%.
Bootstrap support for A3LNN8 as seed ortholog is 100%.

Group of orthologs #777. Best score 230 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 S.stipitis:127

H3AZR3              	100.00%		A3LVN6              	100.00%
Bootstrap support for H3AZR3 as seed ortholog is 93%.
Bootstrap support for A3LVN6 as seed ortholog is 99%.

Group of orthologs #778. Best score 230 bits
Score difference with first non-orthologous sequence - L.chalumnae:230 S.stipitis:230

H3AV88              	100.00%		A3LZS2              	100.00%
Bootstrap support for H3AV88 as seed ortholog is 100%.
Bootstrap support for A3LZS2 as seed ortholog is 100%.

Group of orthologs #779. Best score 230 bits
Score difference with first non-orthologous sequence - L.chalumnae:230 S.stipitis:230

H3B677              	100.00%		A3LXK5              	100.00%
Bootstrap support for H3B677 as seed ortholog is 100%.
Bootstrap support for A3LXK5 as seed ortholog is 100%.

Group of orthologs #780. Best score 230 bits
Score difference with first non-orthologous sequence - L.chalumnae:230 S.stipitis:230

H3BEJ6              	100.00%		A3LVD1              	100.00%
Bootstrap support for H3BEJ6 as seed ortholog is 100%.
Bootstrap support for A3LVD1 as seed ortholog is 100%.

Group of orthologs #781. Best score 229 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 S.stipitis:38

H3A6I1              	100.00%		A3LU79              	100.00%
H3BH41              	41.33%		
H3BBR2              	11.70%		
H2ZZN6              	11.70%		
Bootstrap support for H3A6I1 as seed ortholog is 95%.
Bootstrap support for A3LU79 as seed ortholog is 86%.

Group of orthologs #782. Best score 229 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 S.stipitis:35

H3BE97              	100.00%		P31867              	100.00%
H3AC26              	23.46%		
H3AY00              	12.56%		
H3AKS6              	7.35%		
Bootstrap support for H3BE97 as seed ortholog is 93%.
Bootstrap support for P31867 as seed ortholog is 83%.

Group of orthologs #783. Best score 229 bits
Score difference with first non-orthologous sequence - L.chalumnae:229 S.stipitis:229

H2ZSC2              	100.00%		A3GF83              	100.00%
Bootstrap support for H2ZSC2 as seed ortholog is 100%.
Bootstrap support for A3GF83 as seed ortholog is 100%.

Group of orthologs #784. Best score 229 bits
Score difference with first non-orthologous sequence - L.chalumnae:229 S.stipitis:229

H3A9A6              	100.00%		A3LXQ0              	100.00%
Bootstrap support for H3A9A6 as seed ortholog is 100%.
Bootstrap support for A3LXQ0 as seed ortholog is 100%.

Group of orthologs #785. Best score 229 bits
Score difference with first non-orthologous sequence - L.chalumnae:156 S.stipitis:175

H3AQJ2              	100.00%		A3LXC4              	100.00%
Bootstrap support for H3AQJ2 as seed ortholog is 99%.
Bootstrap support for A3LXC4 as seed ortholog is 100%.

Group of orthologs #786. Best score 229 bits
Score difference with first non-orthologous sequence - L.chalumnae:229 S.stipitis:229

H3BFQ5              	100.00%		A3LUJ2              	100.00%
Bootstrap support for H3BFQ5 as seed ortholog is 100%.
Bootstrap support for A3LUJ2 as seed ortholog is 100%.

Group of orthologs #787. Best score 228 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 S.stipitis:88

H3ANP6              	100.00%		A3GFU2              	100.00%
H3BHD9              	100.00%		A3LY85              	100.00%
H3AQG7              	43.44%		A3LU84              	40.12%
Bootstrap support for H3ANP6 as seed ortholog is 90%.
Bootstrap support for H3BHD9 as seed ortholog is 73%.
Alternative seed ortholog is M3XKF9 (66 bits away from this cluster)
Bootstrap support for A3GFU2 as seed ortholog is 94%.
Bootstrap support for A3LY85 as seed ortholog is 89%.

Group of orthologs #788. Best score 228 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 S.stipitis:228

H2ZW04              	100.00%		A3LZ99              	100.00%
H3AQP0              	18.18%		
H2ZY29              	7.56%		
Bootstrap support for H2ZW04 as seed ortholog is 99%.
Bootstrap support for A3LZ99 as seed ortholog is 100%.

Group of orthologs #789. Best score 228 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 S.stipitis:156

H3ACB8              	100.00%		A3M0B5              	100.00%
H3AN70              	47.55%		
Bootstrap support for H3ACB8 as seed ortholog is 99%.
Bootstrap support for A3M0B5 as seed ortholog is 99%.

Group of orthologs #790. Best score 228 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 S.stipitis:140

H3ARJ2              	100.00%		A3LTA2              	100.00%
H3BBT9              	30.06%		
Bootstrap support for H3ARJ2 as seed ortholog is 100%.
Bootstrap support for A3LTA2 as seed ortholog is 100%.

Group of orthologs #791. Best score 228 bits
Score difference with first non-orthologous sequence - L.chalumnae:228 S.stipitis:228

H3AS58              	100.00%		A3LWM7              	100.00%
H3AF00              	53.55%		
Bootstrap support for H3AS58 as seed ortholog is 100%.
Bootstrap support for A3LWM7 as seed ortholog is 100%.

Group of orthologs #792. Best score 228 bits
Score difference with first non-orthologous sequence - L.chalumnae:228 S.stipitis:139

H3AYC2              	100.00%		A3M060              	100.00%
                    	       		A3LYV2              	7.03%
Bootstrap support for H3AYC2 as seed ortholog is 100%.
Bootstrap support for A3M060 as seed ortholog is 99%.

Group of orthologs #793. Best score 228 bits
Score difference with first non-orthologous sequence - L.chalumnae:228 S.stipitis:228

H3BEE4              	100.00%		A3LVR6              	100.00%
Bootstrap support for H3BEE4 as seed ortholog is 100%.
Bootstrap support for A3LVR6 as seed ortholog is 100%.

Group of orthologs #794. Best score 228 bits
Score difference with first non-orthologous sequence - L.chalumnae:228 S.stipitis:228

H3BGV2              	100.00%		A3LVV0              	100.00%
Bootstrap support for H3BGV2 as seed ortholog is 100%.
Bootstrap support for A3LVV0 as seed ortholog is 100%.

Group of orthologs #795. Best score 228 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 S.stipitis:228

M3XK55              	100.00%		A3LV51              	100.00%
Bootstrap support for M3XK55 as seed ortholog is 100%.
Bootstrap support for A3LV51 as seed ortholog is 100%.

Group of orthologs #796. Best score 227 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 S.stipitis:111

H3ARE9              	100.00%		A3LPG3              	100.00%
H3ASV3              	14.14%		
Bootstrap support for H3ARE9 as seed ortholog is 100%.
Bootstrap support for A3LPG3 as seed ortholog is 99%.

Group of orthologs #797. Best score 227 bits
Score difference with first non-orthologous sequence - L.chalumnae:227 S.stipitis:227

H3A124              	100.00%		A3LQ48              	100.00%
Bootstrap support for H3A124 as seed ortholog is 100%.
Bootstrap support for A3LQ48 as seed ortholog is 100%.

Group of orthologs #798. Best score 227 bits
Score difference with first non-orthologous sequence - L.chalumnae:227 S.stipitis:49

H3AZE6              	100.00%		A3LNJ4              	100.00%
Bootstrap support for H3AZE6 as seed ortholog is 100%.
Bootstrap support for A3LNJ4 as seed ortholog is 90%.

Group of orthologs #799. Best score 226 bits
Score difference with first non-orthologous sequence - L.chalumnae:226 S.stipitis:226

H2ZWE7              	100.00%		A3LYR2              	100.00%
H3AZC2              	16.86%		
Bootstrap support for H2ZWE7 as seed ortholog is 100%.
Bootstrap support for A3LYR2 as seed ortholog is 100%.

Group of orthologs #800. Best score 226 bits
Score difference with first non-orthologous sequence - L.chalumnae:226 S.stipitis:226

H2ZW53              	100.00%		A3LS21              	100.00%
Bootstrap support for H2ZW53 as seed ortholog is 100%.
Bootstrap support for A3LS21 as seed ortholog is 100%.

Group of orthologs #801. Best score 226 bits
Score difference with first non-orthologous sequence - L.chalumnae:226 S.stipitis:156

H3BBU9              	100.00%		A3LWH5              	100.00%
Bootstrap support for H3BBU9 as seed ortholog is 100%.
Bootstrap support for A3LWH5 as seed ortholog is 100%.

Group of orthologs #802. Best score 225 bits
Score difference with first non-orthologous sequence - L.chalumnae:225 S.stipitis:55

H2ZUI0              	100.00%		A3LYC9              	100.00%
Bootstrap support for H2ZUI0 as seed ortholog is 100%.
Bootstrap support for A3LYC9 as seed ortholog is 79%.

Group of orthologs #803. Best score 225 bits
Score difference with first non-orthologous sequence - L.chalumnae:225 S.stipitis:225

H3ALE6              	100.00%		A3LSM1              	100.00%
Bootstrap support for H3ALE6 as seed ortholog is 100%.
Bootstrap support for A3LSM1 as seed ortholog is 100%.

Group of orthologs #804. Best score 225 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 S.stipitis:225

H3BBF7              	100.00%		A3GGT4              	100.00%
Bootstrap support for H3BBF7 as seed ortholog is 99%.
Bootstrap support for A3GGT4 as seed ortholog is 100%.

Group of orthologs #805. Best score 224 bits
Score difference with first non-orthologous sequence - L.chalumnae:23 S.stipitis:224

H3A7E2              	100.00%		A3LR28              	100.00%
H3AL34              	41.29%		
H3AHC1              	30.95%		
Bootstrap support for H3A7E2 as seed ortholog is 59%.
Alternative seed ortholog is H3AH37 (23 bits away from this cluster)
Bootstrap support for A3LR28 as seed ortholog is 100%.

Group of orthologs #806. Best score 224 bits
Score difference with first non-orthologous sequence - L.chalumnae:31 S.stipitis:129

H3ATJ5              	100.00%		A3LR20              	100.00%
H3BGQ6              	80.69%		
Bootstrap support for H3ATJ5 as seed ortholog is 94%.
Bootstrap support for A3LR20 as seed ortholog is 100%.

Group of orthologs #807. Best score 223 bits
Score difference with first non-orthologous sequence - L.chalumnae:164 S.stipitis:223

H3ANX2              	100.00%		A3LUZ0              	100.00%
H3B231              	51.92%		
Bootstrap support for H3ANX2 as seed ortholog is 99%.
Bootstrap support for A3LUZ0 as seed ortholog is 100%.

Group of orthologs #808. Best score 223 bits
Score difference with first non-orthologous sequence - L.chalumnae:73 S.stipitis:111

M3XI55              	100.00%		A3GH66              	100.00%
H3A7Z6              	59.09%		
Bootstrap support for M3XI55 as seed ortholog is 100%.
Bootstrap support for A3GH66 as seed ortholog is 100%.

Group of orthologs #809. Best score 223 bits
Score difference with first non-orthologous sequence - L.chalumnae:13 S.stipitis:223

H2ZW40              	100.00%		A3LRC1              	100.00%
Bootstrap support for H2ZW40 as seed ortholog is 64%.
Alternative seed ortholog is H3A6Z8 (13 bits away from this cluster)
Bootstrap support for A3LRC1 as seed ortholog is 100%.

Group of orthologs #810. Best score 223 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 S.stipitis:133

H3A0W8              	100.00%		A3LVM1              	100.00%
Bootstrap support for H3A0W8 as seed ortholog is 99%.
Bootstrap support for A3LVM1 as seed ortholog is 99%.

Group of orthologs #811. Best score 223 bits
Score difference with first non-orthologous sequence - L.chalumnae:223 S.stipitis:223

H3APE0              	100.00%		A3GFA9              	100.00%
Bootstrap support for H3APE0 as seed ortholog is 100%.
Bootstrap support for A3GFA9 as seed ortholog is 100%.

Group of orthologs #812. Best score 223 bits
Score difference with first non-orthologous sequence - L.chalumnae:223 S.stipitis:223

H3BFN8              	100.00%		A3LQX1              	100.00%
Bootstrap support for H3BFN8 as seed ortholog is 100%.
Bootstrap support for A3LQX1 as seed ortholog is 100%.

Group of orthologs #813. Best score 223 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 S.stipitis:223

H3BB41              	100.00%		A3LZA2              	100.00%
Bootstrap support for H3BB41 as seed ortholog is 99%.
Bootstrap support for A3LZA2 as seed ortholog is 100%.

Group of orthologs #814. Best score 223 bits
Score difference with first non-orthologous sequence - L.chalumnae:223 S.stipitis:223

H3BCB1              	100.00%		A3M0J9              	100.00%
Bootstrap support for H3BCB1 as seed ortholog is 100%.
Bootstrap support for A3M0J9 as seed ortholog is 100%.

Group of orthologs #815. Best score 222 bits
Score difference with first non-orthologous sequence - L.chalumnae:4 S.stipitis:133

M3XJS0              	100.00%		A3LU85              	100.00%
H3BGF4              	64.78%		
H3BGF2              	62.89%		
H3ARU2              	18.24%		
Bootstrap support for M3XJS0 as seed ortholog is 56%.
Alternative seed ortholog is H3AZ40 (4 bits away from this cluster)
Bootstrap support for A3LU85 as seed ortholog is 100%.

Group of orthologs #816. Best score 222 bits
Score difference with first non-orthologous sequence - L.chalumnae:222 S.stipitis:158

H3A5R1              	100.00%		A3LT69              	100.00%
H3ADD1              	91.53%		
Bootstrap support for H3A5R1 as seed ortholog is 100%.
Bootstrap support for A3LT69 as seed ortholog is 100%.

Group of orthologs #817. Best score 222 bits
Score difference with first non-orthologous sequence - L.chalumnae:222 S.stipitis:222

H3A401              	100.00%		A3GHJ9              	100.00%
Bootstrap support for H3A401 as seed ortholog is 100%.
Bootstrap support for A3GHJ9 as seed ortholog is 100%.

Group of orthologs #818. Best score 222 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 S.stipitis:141

H3A8J7              	100.00%		A3LW63              	100.00%
Bootstrap support for H3A8J7 as seed ortholog is 93%.
Bootstrap support for A3LW63 as seed ortholog is 99%.

Group of orthologs #819. Best score 222 bits
Score difference with first non-orthologous sequence - L.chalumnae:222 S.stipitis:175

H3AYW0              	100.00%		A3GGB8              	100.00%
Bootstrap support for H3AYW0 as seed ortholog is 100%.
Bootstrap support for A3GGB8 as seed ortholog is 99%.

Group of orthologs #820. Best score 222 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 S.stipitis:132

H3AXL0              	100.00%		A3LT45              	100.00%
Bootstrap support for H3AXL0 as seed ortholog is 99%.
Bootstrap support for A3LT45 as seed ortholog is 99%.

Group of orthologs #821. Best score 221 bits
Score difference with first non-orthologous sequence - L.chalumnae:221 S.stipitis:221

H3ATY4              	100.00%		A3LTB7              	100.00%
Bootstrap support for H3ATY4 as seed ortholog is 100%.
Bootstrap support for A3LTB7 as seed ortholog is 100%.

Group of orthologs #822. Best score 221 bits
Score difference with first non-orthologous sequence - L.chalumnae:221 S.stipitis:221

H3B1G7              	100.00%		A3LQ89              	100.00%
Bootstrap support for H3B1G7 as seed ortholog is 100%.
Bootstrap support for A3LQ89 as seed ortholog is 100%.

Group of orthologs #823. Best score 221 bits
Score difference with first non-orthologous sequence - L.chalumnae:221 S.stipitis:221

H3BIK6              	100.00%		A3GFB5              	100.00%
Bootstrap support for H3BIK6 as seed ortholog is 100%.
Bootstrap support for A3GFB5 as seed ortholog is 100%.

Group of orthologs #824. Best score 220 bits
Score difference with first non-orthologous sequence - L.chalumnae:220 S.stipitis:220

H3AEA4              	100.00%		A3LVD3              	100.00%
H3AHC4              	24.70%		
Bootstrap support for H3AEA4 as seed ortholog is 100%.
Bootstrap support for A3LVD3 as seed ortholog is 100%.

Group of orthologs #825. Best score 220 bits
Score difference with first non-orthologous sequence - L.chalumnae:142 S.stipitis:95

H3A2V5              	100.00%		A3M0K7              	100.00%
Bootstrap support for H3A2V5 as seed ortholog is 99%.
Bootstrap support for A3M0K7 as seed ortholog is 99%.

Group of orthologs #826. Best score 220 bits
Score difference with first non-orthologous sequence - L.chalumnae:220 S.stipitis:74

H3BGA5              	100.00%		A3LUT6              	100.00%
Bootstrap support for H3BGA5 as seed ortholog is 100%.
Bootstrap support for A3LUT6 as seed ortholog is 94%.

Group of orthologs #827. Best score 220 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 S.stipitis:74

H3BHU5              	100.00%		A3LV62              	100.00%
Bootstrap support for H3BHU5 as seed ortholog is 99%.
Bootstrap support for A3LV62 as seed ortholog is 96%.

Group of orthologs #828. Best score 219 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 S.stipitis:219

H3ACS8              	100.00%		A3LSL2              	100.00%
H3A399              	37.26%		
H3ACC4              	25.36%		
H3AZR2              	5.17%		
Bootstrap support for H3ACS8 as seed ortholog is 93%.
Bootstrap support for A3LSL2 as seed ortholog is 100%.

Group of orthologs #829. Best score 219 bits
Score difference with first non-orthologous sequence - L.chalumnae:219 S.stipitis:219

H3AEZ0              	100.00%		A3GFR5              	100.00%
Bootstrap support for H3AEZ0 as seed ortholog is 100%.
Bootstrap support for A3GFR5 as seed ortholog is 100%.

Group of orthologs #830. Best score 219 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 S.stipitis:127

H3AUA4              	100.00%		A3GGW1              	100.00%
Bootstrap support for H3AUA4 as seed ortholog is 98%.
Bootstrap support for A3GGW1 as seed ortholog is 99%.

Group of orthologs #831. Best score 218 bits
Score difference with first non-orthologous sequence - L.chalumnae:218 S.stipitis:37

H3A3X0              	100.00%		A3GHK3              	100.00%
Bootstrap support for H3A3X0 as seed ortholog is 100%.
Bootstrap support for A3GHK3 as seed ortholog is 98%.

Group of orthologs #832. Best score 218 bits
Score difference with first non-orthologous sequence - L.chalumnae:218 S.stipitis:218

H3AGB5              	100.00%		A3GHU9              	100.00%
Bootstrap support for H3AGB5 as seed ortholog is 100%.
Bootstrap support for A3GHU9 as seed ortholog is 100%.

Group of orthologs #833. Best score 218 bits
Score difference with first non-orthologous sequence - L.chalumnae:218 S.stipitis:218

H3AC17              	100.00%		A3LT20              	100.00%
Bootstrap support for H3AC17 as seed ortholog is 100%.
Bootstrap support for A3LT20 as seed ortholog is 100%.

Group of orthologs #834. Best score 218 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 S.stipitis:142

H3AF23              	100.00%		A3LZD6              	100.00%
Bootstrap support for H3AF23 as seed ortholog is 99%.
Bootstrap support for A3LZD6 as seed ortholog is 100%.

Group of orthologs #835. Best score 218 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 S.stipitis:218

H3AZ67              	100.00%		A3LR62              	100.00%
Bootstrap support for H3AZ67 as seed ortholog is 99%.
Bootstrap support for A3LR62 as seed ortholog is 100%.

Group of orthologs #836. Best score 218 bits
Score difference with first non-orthologous sequence - L.chalumnae:218 S.stipitis:218

H3B6W2              	100.00%		A3LTN3              	100.00%
Bootstrap support for H3B6W2 as seed ortholog is 100%.
Bootstrap support for A3LTN3 as seed ortholog is 100%.

Group of orthologs #837. Best score 217 bits
Score difference with first non-orthologous sequence - L.chalumnae:98 S.stipitis:217

H3AEH1              	100.00%		A3GH30              	100.00%
Bootstrap support for H3AEH1 as seed ortholog is 99%.
Bootstrap support for A3GH30 as seed ortholog is 100%.

Group of orthologs #838. Best score 217 bits
Score difference with first non-orthologous sequence - L.chalumnae:217 S.stipitis:217

H3ANK7              	100.00%		A3LR09              	100.00%
Bootstrap support for H3ANK7 as seed ortholog is 100%.
Bootstrap support for A3LR09 as seed ortholog is 100%.

Group of orthologs #839. Best score 217 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 S.stipitis:217

H3AL25              	100.00%		A3LUI8              	100.00%
Bootstrap support for H3AL25 as seed ortholog is 99%.
Bootstrap support for A3LUI8 as seed ortholog is 100%.

Group of orthologs #840. Best score 217 bits
Score difference with first non-orthologous sequence - L.chalumnae:217 S.stipitis:217

H3AZP1              	100.00%		A3LRT6              	100.00%
Bootstrap support for H3AZP1 as seed ortholog is 100%.
Bootstrap support for A3LRT6 as seed ortholog is 100%.

Group of orthologs #841. Best score 217 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 S.stipitis:217

M3XGY2              	100.00%		A3LZB8              	100.00%
Bootstrap support for M3XGY2 as seed ortholog is 99%.
Bootstrap support for A3LZB8 as seed ortholog is 100%.

Group of orthologs #842. Best score 216 bits
Score difference with first non-orthologous sequence - L.chalumnae:216 S.stipitis:216

H3A6L1              	100.00%		A3LXN5              	100.00%
Bootstrap support for H3A6L1 as seed ortholog is 100%.
Bootstrap support for A3LXN5 as seed ortholog is 100%.

Group of orthologs #843. Best score 216 bits
Score difference with first non-orthologous sequence - L.chalumnae:216 S.stipitis:216

H3B1N4              	100.00%		A3LQ64              	100.00%
Bootstrap support for H3B1N4 as seed ortholog is 100%.
Bootstrap support for A3LQ64 as seed ortholog is 100%.

Group of orthologs #844. Best score 216 bits
Score difference with first non-orthologous sequence - L.chalumnae:216 S.stipitis:216

H3B2P9              	100.00%		A3LT39              	100.00%
Bootstrap support for H3B2P9 as seed ortholog is 100%.
Bootstrap support for A3LT39 as seed ortholog is 100%.

Group of orthologs #845. Best score 216 bits
Score difference with first non-orthologous sequence - L.chalumnae:216 S.stipitis:216

H3BAF0              	100.00%		A3LUF8              	100.00%
Bootstrap support for H3BAF0 as seed ortholog is 100%.
Bootstrap support for A3LUF8 as seed ortholog is 100%.

Group of orthologs #846. Best score 215 bits
Score difference with first non-orthologous sequence - L.chalumnae:150 S.stipitis:215

H3AYR4              	100.00%		A3GFI8              	100.00%
H3AH88              	15.90%		
Bootstrap support for H3AYR4 as seed ortholog is 100%.
Bootstrap support for A3GFI8 as seed ortholog is 100%.

Group of orthologs #847. Best score 215 bits
Score difference with first non-orthologous sequence - L.chalumnae:215 S.stipitis:215

H3B9T5              	100.00%		A3GGR4              	100.00%
H3BD64              	38.02%		
Bootstrap support for H3B9T5 as seed ortholog is 100%.
Bootstrap support for A3GGR4 as seed ortholog is 100%.

Group of orthologs #848. Best score 215 bits
Score difference with first non-orthologous sequence - L.chalumnae:215 S.stipitis:215

H3AFR1              	100.00%		A3GGE4              	100.00%
Bootstrap support for H3AFR1 as seed ortholog is 100%.
Bootstrap support for A3GGE4 as seed ortholog is 100%.

Group of orthologs #849. Best score 215 bits
Score difference with first non-orthologous sequence - L.chalumnae:215 S.stipitis:123

H3AQY0              	100.00%		A3LZ09              	100.00%
Bootstrap support for H3AQY0 as seed ortholog is 100%.
Bootstrap support for A3LZ09 as seed ortholog is 99%.

Group of orthologs #850. Best score 215 bits
Score difference with first non-orthologous sequence - L.chalumnae:215 S.stipitis:215

M3XIH8              	100.00%		A3LQ81              	100.00%
Bootstrap support for M3XIH8 as seed ortholog is 100%.
Bootstrap support for A3LQ81 as seed ortholog is 100%.

Group of orthologs #851. Best score 214 bits
Score difference with first non-orthologous sequence - L.chalumnae:214 S.stipitis:214

H3B5K8              	100.00%		A3LND3              	100.00%
Bootstrap support for H3B5K8 as seed ortholog is 100%.
Bootstrap support for A3LND3 as seed ortholog is 100%.

Group of orthologs #852. Best score 214 bits
Score difference with first non-orthologous sequence - L.chalumnae:214 S.stipitis:214

H3BG39              	100.00%		A3GGV6              	100.00%
Bootstrap support for H3BG39 as seed ortholog is 100%.
Bootstrap support for A3GGV6 as seed ortholog is 100%.

Group of orthologs #853. Best score 213 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 S.stipitis:62

H2ZYK1              	100.00%		A3LYD0              	100.00%
H3AT43              	55.00%		A3LWS0              	9.34%
H3AV19              	6.67%		
Bootstrap support for H2ZYK1 as seed ortholog is 83%.
Bootstrap support for A3LYD0 as seed ortholog is 94%.

Group of orthologs #854. Best score 213 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 S.stipitis:92

H3AU78              	100.00%		A3LTX0              	100.00%
H3B227              	38.65%		
Bootstrap support for H3AU78 as seed ortholog is 99%.
Bootstrap support for A3LTX0 as seed ortholog is 99%.

Group of orthologs #855. Best score 213 bits
Score difference with first non-orthologous sequence - L.chalumnae:213 S.stipitis:213

H3AMI7              	100.00%		A3LZS3              	100.00%
H3AVP3              	53.51%		
Bootstrap support for H3AMI7 as seed ortholog is 100%.
Bootstrap support for A3LZS3 as seed ortholog is 100%.

Group of orthologs #856. Best score 213 bits
Score difference with first non-orthologous sequence - L.chalumnae:213 S.stipitis:213

H2ZXK8              	100.00%		A3LR50              	100.00%
Bootstrap support for H2ZXK8 as seed ortholog is 100%.
Bootstrap support for A3LR50 as seed ortholog is 100%.

Group of orthologs #857. Best score 213 bits
Score difference with first non-orthologous sequence - L.chalumnae:213 S.stipitis:213

H3B105              	100.00%		A3GGU9              	100.00%
Bootstrap support for H3B105 as seed ortholog is 100%.
Bootstrap support for A3GGU9 as seed ortholog is 100%.

Group of orthologs #858. Best score 213 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 S.stipitis:213

H3ARJ8              	100.00%		A3LYA6              	100.00%
Bootstrap support for H3ARJ8 as seed ortholog is 99%.
Bootstrap support for A3LYA6 as seed ortholog is 100%.

Group of orthologs #859. Best score 213 bits
Score difference with first non-orthologous sequence - L.chalumnae:213 S.stipitis:213

H3BGK2              	100.00%		A3LN05              	100.00%
Bootstrap support for H3BGK2 as seed ortholog is 100%.
Bootstrap support for A3LN05 as seed ortholog is 100%.

Group of orthologs #860. Best score 212 bits
Score difference with first non-orthologous sequence - L.chalumnae:212 S.stipitis:212

H3ANG1              	100.00%		A3LYU5              	100.00%
H3AUP4              	56.16%		
Bootstrap support for H3ANG1 as seed ortholog is 100%.
Bootstrap support for A3LYU5 as seed ortholog is 100%.

Group of orthologs #861. Best score 211 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 S.stipitis:211

H2ZXG2              	100.00%		A3GH58              	100.00%
H3BH09              	32.96%		
Bootstrap support for H2ZXG2 as seed ortholog is 97%.
Bootstrap support for A3GH58 as seed ortholog is 100%.

Group of orthologs #862. Best score 211 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 S.stipitis:127

H3A2Z0              	100.00%		A3GFU4              	100.00%
Bootstrap support for H3A2Z0 as seed ortholog is 99%.
Bootstrap support for A3GFU4 as seed ortholog is 100%.

Group of orthologs #863. Best score 211 bits
Score difference with first non-orthologous sequence - L.chalumnae:211 S.stipitis:211

H3AAV8              	100.00%		A3LZL0              	100.00%
Bootstrap support for H3AAV8 as seed ortholog is 100%.
Bootstrap support for A3LZL0 as seed ortholog is 100%.

Group of orthologs #864. Best score 210 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 S.stipitis:80

H2ZW35              	100.00%		A3LXZ2              	100.00%
H3AYG8              	53.83%		
H2ZWJ1              	46.98%		
H2ZXL5              	14.92%		
Bootstrap support for H2ZW35 as seed ortholog is 99%.
Bootstrap support for A3LXZ2 as seed ortholog is 55%.
Alternative seed ortholog is A3LZF6 (80 bits away from this cluster)

Group of orthologs #865. Best score 210 bits
Score difference with first non-orthologous sequence - L.chalumnae:210 S.stipitis:97

H3A653              	100.00%		A3LNJ1              	100.00%
H3AL00              	46.20%		
H3A708              	19.62%		
Bootstrap support for H3A653 as seed ortholog is 100%.
Bootstrap support for A3LNJ1 as seed ortholog is 99%.

Group of orthologs #866. Best score 210 bits
Score difference with first non-orthologous sequence - L.chalumnae:210 S.stipitis:210

H3B6V8              	100.00%		A3GFH2              	100.00%
                    	       		A3M0N6              	36.96%
Bootstrap support for H3B6V8 as seed ortholog is 100%.
Bootstrap support for A3GFH2 as seed ortholog is 100%.

Group of orthologs #867. Best score 210 bits
Score difference with first non-orthologous sequence - L.chalumnae:210 S.stipitis:210

H3AE33              	100.00%		A3LSV9              	100.00%
Bootstrap support for H3AE33 as seed ortholog is 100%.
Bootstrap support for A3LSV9 as seed ortholog is 100%.

Group of orthologs #868. Best score 210 bits
Score difference with first non-orthologous sequence - L.chalumnae:210 S.stipitis:210

H3ANW2              	100.00%		A3LVM9              	100.00%
Bootstrap support for H3ANW2 as seed ortholog is 100%.
Bootstrap support for A3LVM9 as seed ortholog is 100%.

Group of orthologs #869. Best score 210 bits
Score difference with first non-orthologous sequence - L.chalumnae:210 S.stipitis:210

H3BBZ0              	100.00%		A3LZ84              	100.00%
Bootstrap support for H3BBZ0 as seed ortholog is 100%.
Bootstrap support for A3LZ84 as seed ortholog is 100%.

Group of orthologs #870. Best score 209 bits
Score difference with first non-orthologous sequence - L.chalumnae:209 S.stipitis:137

H3AGJ9              	100.00%		A3GFE3              	100.00%
H3B996              	100.00%		
Bootstrap support for H3AGJ9 as seed ortholog is 100%.
Bootstrap support for H3B996 as seed ortholog is 100%.
Bootstrap support for A3GFE3 as seed ortholog is 99%.

Group of orthologs #871. Best score 209 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 S.stipitis:124

M3XH90              	100.00%		A3GFX4              	100.00%
H3AY94              	48.29%		
Bootstrap support for M3XH90 as seed ortholog is 99%.
Bootstrap support for A3GFX4 as seed ortholog is 99%.

Group of orthologs #872. Best score 209 bits
Score difference with first non-orthologous sequence - L.chalumnae:162 S.stipitis:209

H3A6G6              	100.00%		A3LY94              	100.00%
Bootstrap support for H3A6G6 as seed ortholog is 100%.
Bootstrap support for A3LY94 as seed ortholog is 100%.

Group of orthologs #873. Best score 209 bits
Score difference with first non-orthologous sequence - L.chalumnae:209 S.stipitis:209

H3BAG8              	100.00%		A3LQV9              	100.00%
Bootstrap support for H3BAG8 as seed ortholog is 100%.
Bootstrap support for A3LQV9 as seed ortholog is 100%.

Group of orthologs #874. Best score 209 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 S.stipitis:88

H3BFJ0              	100.00%		A3LPX0              	100.00%
Bootstrap support for H3BFJ0 as seed ortholog is 99%.
Bootstrap support for A3LPX0 as seed ortholog is 99%.

Group of orthologs #875. Best score 209 bits
Score difference with first non-orthologous sequence - L.chalumnae:209 S.stipitis:209

M3XKR4              	100.00%		A3GH22              	100.00%
Bootstrap support for M3XKR4 as seed ortholog is 100%.
Bootstrap support for A3GH22 as seed ortholog is 100%.

Group of orthologs #876. Best score 209 bits
Score difference with first non-orthologous sequence - L.chalumnae:209 S.stipitis:209

H3BAI1              	100.00%		A3LWG2              	100.00%
Bootstrap support for H3BAI1 as seed ortholog is 100%.
Bootstrap support for A3LWG2 as seed ortholog is 100%.

Group of orthologs #877. Best score 209 bits
Score difference with first non-orthologous sequence - L.chalumnae:39 S.stipitis:209

H3BBY4              	100.00%		A3LX48              	100.00%
Bootstrap support for H3BBY4 as seed ortholog is 76%.
Bootstrap support for A3LX48 as seed ortholog is 100%.

Group of orthologs #878. Best score 208 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 S.stipitis:47

H3AUU7              	100.00%		A3LQV8              	100.00%
H3AFS5              	58.23%		A3LNB8              	17.47%
H3B4L0              	39.19%		
H3AYT7              	33.42%		
H3B6X4              	20.27%		
M3XIG4              	16.34%		
H3BDJ3              	12.41%		
H3A1C7              	11.55%		
H3AQ06              	11.30%		
H3A0N7              	8.48%		
Bootstrap support for H3AUU7 as seed ortholog is 93%.
Bootstrap support for A3LQV8 as seed ortholog is 84%.

Group of orthologs #879. Best score 208 bits
Score difference with first non-orthologous sequence - L.chalumnae:208 S.stipitis:208

H3AMX3              	100.00%		A3LRW1              	100.00%
H3BIM3              	40.00%		
Bootstrap support for H3AMX3 as seed ortholog is 100%.
Bootstrap support for A3LRW1 as seed ortholog is 100%.

Group of orthologs #880. Best score 208 bits
Score difference with first non-orthologous sequence - L.chalumnae:208 S.stipitis:208

H3B890              	100.00%		A3LY33              	100.00%
                    	       		A3LR26              	28.57%
Bootstrap support for H3B890 as seed ortholog is 100%.
Bootstrap support for A3LY33 as seed ortholog is 100%.

Group of orthologs #881. Best score 208 bits
Score difference with first non-orthologous sequence - L.chalumnae:208 S.stipitis:208

H3AR89              	100.00%		A3LS90              	100.00%
Bootstrap support for H3AR89 as seed ortholog is 100%.
Bootstrap support for A3LS90 as seed ortholog is 100%.

Group of orthologs #882. Best score 208 bits
Score difference with first non-orthologous sequence - L.chalumnae:208 S.stipitis:208

H3B800              	100.00%		A3GFH1              	100.00%
Bootstrap support for H3B800 as seed ortholog is 100%.
Bootstrap support for A3GFH1 as seed ortholog is 100%.

Group of orthologs #883. Best score 207 bits
Score difference with first non-orthologous sequence - L.chalumnae:207 S.stipitis:207

H3AWD6              	100.00%		A3LN26              	100.00%
H3BC45              	100.00%		
H3B8J7              	82.19%		
H3AIR0              	62.60%		
Bootstrap support for H3AWD6 as seed ortholog is 100%.
Bootstrap support for H3BC45 as seed ortholog is 100%.
Bootstrap support for A3LN26 as seed ortholog is 100%.

Group of orthologs #884. Best score 207 bits
Score difference with first non-orthologous sequence - L.chalumnae:207 S.stipitis:207

H3B3D9              	100.00%		A3LZG2              	100.00%
H3A2I4              	41.02%		
H3AB14              	35.01%		
H3BHW2              	31.01%		
Bootstrap support for H3B3D9 as seed ortholog is 100%.
Bootstrap support for A3LZG2 as seed ortholog is 100%.

Group of orthologs #885. Best score 207 bits
Score difference with first non-orthologous sequence - L.chalumnae:207 S.stipitis:207

H3BCQ0              	100.00%		A3LTE6              	100.00%
Bootstrap support for H3BCQ0 as seed ortholog is 100%.
Bootstrap support for A3LTE6 as seed ortholog is 100%.

Group of orthologs #886. Best score 207 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 S.stipitis:207

H3BHE6              	100.00%		A3LPX6              	100.00%
Bootstrap support for H3BHE6 as seed ortholog is 100%.
Bootstrap support for A3LPX6 as seed ortholog is 100%.

Group of orthologs #887. Best score 207 bits
Score difference with first non-orthologous sequence - L.chalumnae:207 S.stipitis:207

M3XK96              	100.00%		A3LQD7              	100.00%
Bootstrap support for M3XK96 as seed ortholog is 100%.
Bootstrap support for A3LQD7 as seed ortholog is 100%.

Group of orthologs #888. Best score 207 bits
Score difference with first non-orthologous sequence - L.chalumnae:207 S.stipitis:207

H3BE03              	100.00%		A3LY48              	100.00%
Bootstrap support for H3BE03 as seed ortholog is 100%.
Bootstrap support for A3LY48 as seed ortholog is 100%.

Group of orthologs #889. Best score 206 bits
Score difference with first non-orthologous sequence - L.chalumnae:19 S.stipitis:206

H3BIN2              	100.00%		A3GHT1              	100.00%
H3AJ39              	100.00%		A3LZQ9              	100.00%
H3A5F3              	55.49%		
H3AGL2              	8.90%		
Bootstrap support for H3BIN2 as seed ortholog is 61%.
Alternative seed ortholog is H3AIM4 (19 bits away from this cluster)
Bootstrap support for H3AJ39 as seed ortholog is 99%.
Bootstrap support for A3GHT1 as seed ortholog is 100%.
Bootstrap support for A3LZQ9 as seed ortholog is 100%.

Group of orthologs #890. Best score 206 bits
Score difference with first non-orthologous sequence - L.chalumnae:206 S.stipitis:206

H3A0F4              	100.00%		A3M0L9              	100.00%
Bootstrap support for H3A0F4 as seed ortholog is 100%.
Bootstrap support for A3M0L9 as seed ortholog is 100%.

Group of orthologs #891. Best score 206 bits
Score difference with first non-orthologous sequence - L.chalumnae:206 S.stipitis:206

H3AAJ1              	100.00%		A3LVC2              	100.00%
Bootstrap support for H3AAJ1 as seed ortholog is 100%.
Bootstrap support for A3LVC2 as seed ortholog is 100%.

Group of orthologs #892. Best score 205 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 S.stipitis:77

H3AAT1              	100.00%		A3LZ12              	100.00%
H3ANM8              	100.00%		A3GGS8              	100.00%
H3BI60              	67.97%		
H3A6H8              	65.80%		
Bootstrap support for H3AAT1 as seed ortholog is 94%.
Bootstrap support for H3ANM8 as seed ortholog is 92%.
Bootstrap support for A3LZ12 as seed ortholog is 99%.
Bootstrap support for A3GGS8 as seed ortholog is 97%.

Group of orthologs #893. Best score 205 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 S.stipitis:36

H3AND5              	100.00%		A3LTH0              	100.00%
H3ANI9              	85.19%		
H3AAK6              	16.05%		
H3ASL4              	15.23%		
H3B4G4              	14.40%		
Bootstrap support for H3AND5 as seed ortholog is 99%.
Bootstrap support for A3LTH0 as seed ortholog is 89%.

Group of orthologs #894. Best score 205 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 S.stipitis:205

H3BDU2              	100.00%		A3LQ82              	100.00%
H3A0X5              	34.46%		
H3A105              	24.10%		
Bootstrap support for H3BDU2 as seed ortholog is 99%.
Bootstrap support for A3LQ82 as seed ortholog is 100%.

Group of orthologs #895. Best score 205 bits
Score difference with first non-orthologous sequence - L.chalumnae:205 S.stipitis:143

H3A131              	100.00%		A3GF79              	100.00%
H3AL45              	23.53%		
Bootstrap support for H3A131 as seed ortholog is 100%.
Bootstrap support for A3GF79 as seed ortholog is 99%.

Group of orthologs #896. Best score 205 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 S.stipitis:45

H3AUE0              	100.00%		A3GF86              	100.00%
H3BBE2              	52.88%		
Bootstrap support for H3AUE0 as seed ortholog is 99%.
Bootstrap support for A3GF86 as seed ortholog is 89%.

Group of orthologs #897. Best score 205 bits
Score difference with first non-orthologous sequence - L.chalumnae:205 S.stipitis:205

H3A587              	100.00%		A3LWX2              	100.00%
Bootstrap support for H3A587 as seed ortholog is 100%.
Bootstrap support for A3LWX2 as seed ortholog is 100%.

Group of orthologs #898. Best score 205 bits
Score difference with first non-orthologous sequence - L.chalumnae:205 S.stipitis:205

H3AUM4              	100.00%		A3LV87              	100.00%
Bootstrap support for H3AUM4 as seed ortholog is 100%.
Bootstrap support for A3LV87 as seed ortholog is 100%.

Group of orthologs #899. Best score 204 bits
Score difference with first non-orthologous sequence - L.chalumnae:204 S.stipitis:204

H3A8M1              	100.00%		A3GGA2              	100.00%
Bootstrap support for H3A8M1 as seed ortholog is 100%.
Bootstrap support for A3GGA2 as seed ortholog is 100%.

Group of orthologs #900. Best score 204 bits
Score difference with first non-orthologous sequence - L.chalumnae:15 S.stipitis:204

H3AA08              	100.00%		A3LVN3              	100.00%
Bootstrap support for H3AA08 as seed ortholog is 77%.
Bootstrap support for A3LVN3 as seed ortholog is 100%.

Group of orthologs #901. Best score 204 bits
Score difference with first non-orthologous sequence - L.chalumnae:204 S.stipitis:204

H3AKN2              	100.00%		A3LMU8              	100.00%
Bootstrap support for H3AKN2 as seed ortholog is 100%.
Bootstrap support for A3LMU8 as seed ortholog is 100%.

Group of orthologs #902. Best score 204 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 S.stipitis:204

H3AFD6              	100.00%		A3LVW9              	100.00%
Bootstrap support for H3AFD6 as seed ortholog is 99%.
Bootstrap support for A3LVW9 as seed ortholog is 100%.

Group of orthologs #903. Best score 204 bits
Score difference with first non-orthologous sequence - L.chalumnae:204 S.stipitis:204

H3AK52              	100.00%		A3LU90              	100.00%
Bootstrap support for H3AK52 as seed ortholog is 100%.
Bootstrap support for A3LU90 as seed ortholog is 100%.

Group of orthologs #904. Best score 204 bits
Score difference with first non-orthologous sequence - L.chalumnae:204 S.stipitis:204

H3AZS2              	100.00%		A3LV26              	100.00%
Bootstrap support for H3AZS2 as seed ortholog is 100%.
Bootstrap support for A3LV26 as seed ortholog is 100%.

Group of orthologs #905. Best score 203 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 S.stipitis:46

H3AJB9              	100.00%		A3GHL8              	100.00%
H3BHJ0              	68.90%		
Bootstrap support for H3AJB9 as seed ortholog is 99%.
Bootstrap support for A3GHL8 as seed ortholog is 90%.

Group of orthologs #906. Best score 203 bits
Score difference with first non-orthologous sequence - L.chalumnae:203 S.stipitis:203

H2ZSW5              	100.00%		A3LXH5              	100.00%
Bootstrap support for H2ZSW5 as seed ortholog is 100%.
Bootstrap support for A3LXH5 as seed ortholog is 100%.

Group of orthologs #907. Best score 203 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 S.stipitis:203

H3A1W6              	100.00%		A3LU64              	100.00%
Bootstrap support for H3A1W6 as seed ortholog is 99%.
Bootstrap support for A3LU64 as seed ortholog is 100%.

Group of orthologs #908. Best score 203 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 S.stipitis:112

H3AH73              	100.00%		A3LUR1              	100.00%
Bootstrap support for H3AH73 as seed ortholog is 99%.
Bootstrap support for A3LUR1 as seed ortholog is 99%.

Group of orthologs #909. Best score 203 bits
Score difference with first non-orthologous sequence - L.chalumnae:203 S.stipitis:203

H3ALU6              	100.00%		A3LYP5              	100.00%
Bootstrap support for H3ALU6 as seed ortholog is 100%.
Bootstrap support for A3LYP5 as seed ortholog is 100%.

Group of orthologs #910. Best score 203 bits
Score difference with first non-orthologous sequence - L.chalumnae:203 S.stipitis:203

H3AZ27              	100.00%		A3LRZ3              	100.00%
Bootstrap support for H3AZ27 as seed ortholog is 100%.
Bootstrap support for A3LRZ3 as seed ortholog is 100%.

Group of orthologs #911. Best score 203 bits
Score difference with first non-orthologous sequence - L.chalumnae:203 S.stipitis:203

H3BD94              	100.00%		A3LT49              	100.00%
Bootstrap support for H3BD94 as seed ortholog is 100%.
Bootstrap support for A3LT49 as seed ortholog is 100%.

Group of orthologs #912. Best score 202 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 S.stipitis:202

H3AJV0              	100.00%		A3LR65              	100.00%
Bootstrap support for H3AJV0 as seed ortholog is 99%.
Bootstrap support for A3LR65 as seed ortholog is 100%.

Group of orthologs #913. Best score 202 bits
Score difference with first non-orthologous sequence - L.chalumnae:202 S.stipitis:202

H3ASH8              	100.00%		A3LRQ6              	100.00%
Bootstrap support for H3ASH8 as seed ortholog is 100%.
Bootstrap support for A3LRQ6 as seed ortholog is 100%.

Group of orthologs #914. Best score 202 bits
Score difference with first non-orthologous sequence - L.chalumnae:202 S.stipitis:202

H3ARB5              	100.00%		A3LWN0              	100.00%
Bootstrap support for H3ARB5 as seed ortholog is 100%.
Bootstrap support for A3LWN0 as seed ortholog is 100%.

Group of orthologs #915. Best score 201 bits
Score difference with first non-orthologous sequence - L.chalumnae:201 S.stipitis:201

H3BB35              	100.00%		A3GHX2              	100.00%
H3A3H6              	55.87%		
H3B2J2              	50.82%		
H3B4A7              	16.39%		
H3B7M7              	9.56%		
Bootstrap support for H3BB35 as seed ortholog is 100%.
Bootstrap support for A3GHX2 as seed ortholog is 100%.

Group of orthologs #916. Best score 201 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 S.stipitis:201

H3AV21              	100.00%		A3LTE1              	100.00%
Bootstrap support for H3AV21 as seed ortholog is 99%.
Bootstrap support for A3LTE1 as seed ortholog is 100%.

Group of orthologs #917. Best score 201 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 S.stipitis:118

H3B317              	100.00%		A3LS38              	100.00%
Bootstrap support for H3B317 as seed ortholog is 99%.
Bootstrap support for A3LS38 as seed ortholog is 99%.

Group of orthologs #918. Best score 201 bits
Score difference with first non-orthologous sequence - L.chalumnae:201 S.stipitis:201

H3BBN3              	100.00%		A3GGS6              	100.00%
Bootstrap support for H3BBN3 as seed ortholog is 100%.
Bootstrap support for A3GGS6 as seed ortholog is 100%.

Group of orthologs #919. Best score 201 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 S.stipitis:201

H3BGM9              	100.00%		A3GHC4              	100.00%
Bootstrap support for H3BGM9 as seed ortholog is 98%.
Bootstrap support for A3GHC4 as seed ortholog is 100%.

Group of orthologs #920. Best score 201 bits
Score difference with first non-orthologous sequence - L.chalumnae:201 S.stipitis:201

H3BHK5              	100.00%		A3LPM8              	100.00%
Bootstrap support for H3BHK5 as seed ortholog is 100%.
Bootstrap support for A3LPM8 as seed ortholog is 100%.

Group of orthologs #921. Best score 200 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 S.stipitis:124

H3AEB1              	100.00%		A3LQ14              	100.00%
H2ZX92              	37.41%		
Bootstrap support for H3AEB1 as seed ortholog is 89%.
Bootstrap support for A3LQ14 as seed ortholog is 99%.

Group of orthologs #922. Best score 200 bits
Score difference with first non-orthologous sequence - L.chalumnae:132 S.stipitis:200

H3BI16              	100.00%		A3LZ51              	100.00%
Bootstrap support for H3BI16 as seed ortholog is 99%.
Bootstrap support for A3LZ51 as seed ortholog is 100%.

Group of orthologs #923. Best score 199 bits
Score difference with first non-orthologous sequence - L.chalumnae:199 S.stipitis:199

H3A112              	100.00%		A3LQQ0              	100.00%
Bootstrap support for H3A112 as seed ortholog is 100%.
Bootstrap support for A3LQQ0 as seed ortholog is 100%.

Group of orthologs #924. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 S.stipitis:198

H3ARN1              	100.00%		A3LNX2              	100.00%
H3AP32              	38.71%		A3LNX1              	74.82%
                    	       		A3LV79              	11.29%
                    	       		A3LQQ9              	11.08%
Bootstrap support for H3ARN1 as seed ortholog is 88%.
Bootstrap support for A3LNX2 as seed ortholog is 100%.

Group of orthologs #925. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:137 S.stipitis:32

H3AH13              	100.00%		A3LTV4              	100.00%
H3B907              	60.97%		
H2ZUG3              	33.74%		
Bootstrap support for H3AH13 as seed ortholog is 99%.
Bootstrap support for A3LTV4 as seed ortholog is 75%.

Group of orthologs #926. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 S.stipitis:198

H3AVW4              	100.00%		A3GFU6              	100.00%
H3AXA8              	33.21%		
H3AXN8              	31.32%		
Bootstrap support for H3AVW4 as seed ortholog is 100%.
Bootstrap support for A3GFU6 as seed ortholog is 100%.

Group of orthologs #927. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 S.stipitis:198

H3BG82              	100.00%		A3LQC4              	100.00%
H2ZYT6              	42.77%		A3LYC5              	9.51%
Bootstrap support for H3BG82 as seed ortholog is 100%.
Bootstrap support for A3LQC4 as seed ortholog is 100%.

Group of orthologs #928. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 S.stipitis:198

H2ZZB1              	100.00%		A3LTF7              	100.00%
H3AY17              	50.13%		
Bootstrap support for H2ZZB1 as seed ortholog is 100%.
Bootstrap support for A3LTF7 as seed ortholog is 100%.

Group of orthologs #929. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 S.stipitis:198

H3AW49              	100.00%		A3LXW8              	100.00%
H3AC99              	48.86%		
Bootstrap support for H3AW49 as seed ortholog is 100%.
Bootstrap support for A3LXW8 as seed ortholog is 100%.

Group of orthologs #930. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 S.stipitis:198

H3A2N1              	100.00%		A3GFZ9              	100.00%
Bootstrap support for H3A2N1 as seed ortholog is 100%.
Bootstrap support for A3GFZ9 as seed ortholog is 100%.

Group of orthologs #931. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 S.stipitis:198

H3AN50              	100.00%		A3LQB9              	100.00%
Bootstrap support for H3AN50 as seed ortholog is 100%.
Bootstrap support for A3LQB9 as seed ortholog is 100%.

Group of orthologs #932. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 S.stipitis:198

H3AGJ0              	100.00%		A3LY98              	100.00%
Bootstrap support for H3AGJ0 as seed ortholog is 100%.
Bootstrap support for A3LY98 as seed ortholog is 100%.

Group of orthologs #933. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:198 S.stipitis:198

H3B6Y8              	100.00%		A3LX39              	100.00%
Bootstrap support for H3B6Y8 as seed ortholog is 100%.
Bootstrap support for A3LX39 as seed ortholog is 100%.

Group of orthologs #934. Best score 198 bits
Score difference with first non-orthologous sequence - L.chalumnae:118 S.stipitis:198

M3XH76              	100.00%		A3LYA8              	100.00%
Bootstrap support for M3XH76 as seed ortholog is 99%.
Bootstrap support for A3LYA8 as seed ortholog is 100%.

Group of orthologs #935. Best score 197 bits
Score difference with first non-orthologous sequence - L.chalumnae:197 S.stipitis:197

H3AGE7              	100.00%		A3GI37              	100.00%
H3AS50              	51.62%		A3LMV3              	21.82%
                    	       		A3LYD2              	16.79%
Bootstrap support for H3AGE7 as seed ortholog is 100%.
Bootstrap support for A3GI37 as seed ortholog is 100%.

Group of orthologs #936. Best score 197 bits
Score difference with first non-orthologous sequence - L.chalumnae:197 S.stipitis:197

H3AP07              	100.00%		A3LYH2              	100.00%
H3AX70              	61.66%		
Bootstrap support for H3AP07 as seed ortholog is 100%.
Bootstrap support for A3LYH2 as seed ortholog is 100%.

Group of orthologs #937. Best score 197 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 S.stipitis:94

H3BEC6              	100.00%		A3LSY6              	100.00%
                    	       		A3LR75              	57.41%
Bootstrap support for H3BEC6 as seed ortholog is 97%.
Bootstrap support for A3LSY6 as seed ortholog is 99%.

Group of orthologs #938. Best score 197 bits
Score difference with first non-orthologous sequence - L.chalumnae:197 S.stipitis:197

H3AFJ5              	100.00%		A3LUY6              	100.00%
Bootstrap support for H3AFJ5 as seed ortholog is 100%.
Bootstrap support for A3LUY6 as seed ortholog is 100%.

Group of orthologs #939. Best score 197 bits
Score difference with first non-orthologous sequence - L.chalumnae:197 S.stipitis:197

H3AXA9              	100.00%		A3GGP5              	100.00%
Bootstrap support for H3AXA9 as seed ortholog is 100%.
Bootstrap support for A3GGP5 as seed ortholog is 100%.

Group of orthologs #940. Best score 197 bits
Score difference with first non-orthologous sequence - L.chalumnae:197 S.stipitis:197

H3AM61              	100.00%		A3LVX9              	100.00%
Bootstrap support for H3AM61 as seed ortholog is 100%.
Bootstrap support for A3LVX9 as seed ortholog is 100%.

Group of orthologs #941. Best score 197 bits
Score difference with first non-orthologous sequence - L.chalumnae:197 S.stipitis:197

H3B3L7              	100.00%		A3LQA0              	100.00%
Bootstrap support for H3B3L7 as seed ortholog is 100%.
Bootstrap support for A3LQA0 as seed ortholog is 100%.

Group of orthologs #942. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:196 S.stipitis:196

H3AAQ6              	100.00%		A3LS87              	100.00%
H2ZTZ4              	50.08%		
H3A9H6              	25.13%		
Bootstrap support for H3AAQ6 as seed ortholog is 100%.
Bootstrap support for A3LS87 as seed ortholog is 100%.

Group of orthologs #943. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:196 S.stipitis:196

H3A140              	100.00%		A3LTT7              	100.00%
H3A948              	49.57%		
Bootstrap support for H3A140 as seed ortholog is 100%.
Bootstrap support for A3LTT7 as seed ortholog is 100%.

Group of orthologs #944. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:150 S.stipitis:124

H3AN26              	100.00%		A3LNF3              	100.00%
H3B040              	28.36%		
Bootstrap support for H3AN26 as seed ortholog is 99%.
Bootstrap support for A3LNF3 as seed ortholog is 99%.

Group of orthologs #945. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:35 S.stipitis:36

H3ARN2              	100.00%		A3LNZ4              	100.00%
H2ZZJ1              	35.84%		
Bootstrap support for H3ARN2 as seed ortholog is 74%.
Alternative seed ortholog is H2ZUZ8 (35 bits away from this cluster)
Bootstrap support for A3LNZ4 as seed ortholog is 82%.

Group of orthologs #946. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:196 S.stipitis:196

H3BEG5              	100.00%		A3LUN1              	100.00%
M3XI53              	24.70%		
Bootstrap support for H3BEG5 as seed ortholog is 100%.
Bootstrap support for A3LUN1 as seed ortholog is 100%.

Group of orthologs #947. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 S.stipitis:196

H2ZVI3              	100.00%		A3GH80              	100.00%
Bootstrap support for H2ZVI3 as seed ortholog is 99%.
Bootstrap support for A3GH80 as seed ortholog is 100%.

Group of orthologs #948. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:9 S.stipitis:107

H3A233              	100.00%		A3LXQ4              	100.00%
Bootstrap support for H3A233 as seed ortholog is 61%.
Alternative seed ortholog is H3B6Q1 (9 bits away from this cluster)
Bootstrap support for A3LXQ4 as seed ortholog is 99%.

Group of orthologs #949. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:153 S.stipitis:196

H3A4V6              	100.00%		A3LVA8              	100.00%
Bootstrap support for H3A4V6 as seed ortholog is 100%.
Bootstrap support for A3LVA8 as seed ortholog is 100%.

Group of orthologs #950. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:196 S.stipitis:196

H3AEZ7              	100.00%		A3LPI0              	100.00%
Bootstrap support for H3AEZ7 as seed ortholog is 100%.
Bootstrap support for A3LPI0 as seed ortholog is 100%.

Group of orthologs #951. Best score 196 bits
Score difference with first non-orthologous sequence - L.chalumnae:147 S.stipitis:110

H3BCH7              	100.00%		A3LR03              	100.00%
Bootstrap support for H3BCH7 as seed ortholog is 99%.
Bootstrap support for A3LR03 as seed ortholog is 99%.

Group of orthologs #952. Best score 195 bits
Score difference with first non-orthologous sequence - L.chalumnae:195 S.stipitis:195

M3XK62              	100.00%		A3LWM3              	100.00%
M3XGI1              	75.03%		A3LT70              	15.60%
H3BCU2              	27.82%		A3LY54              	8.85%
                    	       		A3GGC6              	6.64%
Bootstrap support for M3XK62 as seed ortholog is 100%.
Bootstrap support for A3LWM3 as seed ortholog is 100%.

Group of orthologs #953. Best score 195 bits
Score difference with first non-orthologous sequence - L.chalumnae:30 S.stipitis:195

H2ZZD6              	100.00%		A3LPH1              	100.00%
H3AE34              	36.94%		A3LN44              	7.80%
H2ZXS9              	26.79%		
Bootstrap support for H2ZZD6 as seed ortholog is 83%.
Bootstrap support for A3LPH1 as seed ortholog is 100%.

Group of orthologs #954. Best score 195 bits
Score difference with first non-orthologous sequence - L.chalumnae:195 S.stipitis:195

H3AB75              	100.00%		A3LRK1              	100.00%
H3AE82              	36.73%		A3GG49              	18.49%
M3XI70              	30.10%		
Bootstrap support for H3AB75 as seed ortholog is 100%.
Bootstrap support for A3LRK1 as seed ortholog is 100%.

Group of orthologs #955. Best score 195 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 S.stipitis:195

H2ZVP0              	100.00%		A3LS92              	100.00%
H2ZYC3              	44.86%		
H3AH64              	29.32%		
Bootstrap support for H2ZVP0 as seed ortholog is 90%.
Bootstrap support for A3LS92 as seed ortholog is 100%.

Group of orthologs #956. Best score 195 bits
Score difference with first non-orthologous sequence - L.chalumnae:195 S.stipitis:195

H3A040              	100.00%		A3GF65              	100.00%
Bootstrap support for H3A040 as seed ortholog is 100%.
Bootstrap support for A3GF65 as seed ortholog is 100%.

Group of orthologs #957. Best score 195 bits
Score difference with first non-orthologous sequence - L.chalumnae:195 S.stipitis:195

H2ZX45              	100.00%		A3LTX4              	100.00%
Bootstrap support for H2ZX45 as seed ortholog is 100%.
Bootstrap support for A3LTX4 as seed ortholog is 100%.

Group of orthologs #958. Best score 195 bits
Score difference with first non-orthologous sequence - L.chalumnae:195 S.stipitis:195

H2ZSY7              	100.00%		A3LZG1              	100.00%
Bootstrap support for H2ZSY7 as seed ortholog is 100%.
Bootstrap support for A3LZG1 as seed ortholog is 100%.

Group of orthologs #959. Best score 195 bits
Score difference with first non-orthologous sequence - L.chalumnae:195 S.stipitis:195

H3AND2              	100.00%		A3LQY0              	100.00%
Bootstrap support for H3AND2 as seed ortholog is 100%.
Bootstrap support for A3LQY0 as seed ortholog is 100%.

Group of orthologs #960. Best score 195 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 S.stipitis:195

H3ARW6              	100.00%		A3LVL2              	100.00%
Bootstrap support for H3ARW6 as seed ortholog is 99%.
Bootstrap support for A3LVL2 as seed ortholog is 100%.

Group of orthologs #961. Best score 195 bits
Score difference with first non-orthologous sequence - L.chalumnae:34 S.stipitis:195

H3B8D6              	100.00%		A3LTA4              	100.00%
Bootstrap support for H3B8D6 as seed ortholog is 91%.
Bootstrap support for A3LTA4 as seed ortholog is 100%.

Group of orthologs #962. Best score 194 bits
Score difference with first non-orthologous sequence - L.chalumnae:98 S.stipitis:123

H3A858              	100.00%		A3LZ35              	100.00%
H3AGI3              	100.00%		
Bootstrap support for H3A858 as seed ortholog is 100%.
Bootstrap support for H3AGI3 as seed ortholog is 100%.
Bootstrap support for A3LZ35 as seed ortholog is 100%.

Group of orthologs #963. Best score 194 bits
Score difference with first non-orthologous sequence - L.chalumnae:41 S.stipitis:135

H2ZX98              	100.00%		A3LS95              	100.00%
Bootstrap support for H2ZX98 as seed ortholog is 85%.
Bootstrap support for A3LS95 as seed ortholog is 99%.

Group of orthologs #964. Best score 194 bits
Score difference with first non-orthologous sequence - L.chalumnae:194 S.stipitis:194

H3A0F5              	100.00%		A3LSG9              	100.00%
Bootstrap support for H3A0F5 as seed ortholog is 100%.
Bootstrap support for A3LSG9 as seed ortholog is 100%.

Group of orthologs #965. Best score 194 bits
Score difference with first non-orthologous sequence - L.chalumnae:194 S.stipitis:194

H3A0R6              	100.00%		A3LWP2              	100.00%
Bootstrap support for H3A0R6 as seed ortholog is 100%.
Bootstrap support for A3LWP2 as seed ortholog is 100%.

Group of orthologs #966. Best score 194 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 S.stipitis:53

H3ANL3              	100.00%		A3GGP7              	100.00%
Bootstrap support for H3ANL3 as seed ortholog is 99%.
Bootstrap support for A3GGP7 as seed ortholog is 96%.

Group of orthologs #967. Best score 194 bits
Score difference with first non-orthologous sequence - L.chalumnae:6 S.stipitis:194

H3ASY3              	100.00%		A3LQF2              	100.00%
Bootstrap support for H3ASY3 as seed ortholog is 55%.
Alternative seed ortholog is H3APY8 (6 bits away from this cluster)
Bootstrap support for A3LQF2 as seed ortholog is 100%.

Group of orthologs #968. Best score 194 bits
Score difference with first non-orthologous sequence - L.chalumnae:40 S.stipitis:194

H3AQV2              	100.00%		A3LTN5              	100.00%
Bootstrap support for H3AQV2 as seed ortholog is 85%.
Bootstrap support for A3LTN5 as seed ortholog is 100%.

Group of orthologs #969. Best score 194 bits
Score difference with first non-orthologous sequence - L.chalumnae:194 S.stipitis:194

H3ARX8              	100.00%		A3LWF6              	100.00%
Bootstrap support for H3ARX8 as seed ortholog is 100%.
Bootstrap support for A3LWF6 as seed ortholog is 100%.

Group of orthologs #970. Best score 194 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 S.stipitis:194

H3BEI3              	100.00%		A3LZ87              	100.00%
Bootstrap support for H3BEI3 as seed ortholog is 97%.
Bootstrap support for A3LZ87 as seed ortholog is 100%.

Group of orthologs #971. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:193 S.stipitis:193

H3AXN5              	100.00%		A3LRQ7              	100.00%
                    	       		A3LVV1              	94.66%
Bootstrap support for H3AXN5 as seed ortholog is 100%.
Bootstrap support for A3LRQ7 as seed ortholog is 100%.

Group of orthologs #972. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:24 S.stipitis:23

H3B3G7              	100.00%		A3LNN2              	100.00%
H3B4S1              	36.61%		
Bootstrap support for H3B3G7 as seed ortholog is 74%.
Alternative seed ortholog is M3XIG9 (24 bits away from this cluster)
Bootstrap support for A3LNN2 as seed ortholog is 71%.
Alternative seed ortholog is A3GHJ2 (23 bits away from this cluster)

Group of orthologs #973. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:193 S.stipitis:193

H3A5H1              	100.00%		A3LXD4              	100.00%
Bootstrap support for H3A5H1 as seed ortholog is 100%.
Bootstrap support for A3LXD4 as seed ortholog is 100%.

Group of orthologs #974. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:193 S.stipitis:193

H3AZ19              	100.00%		A3LU96              	100.00%
Bootstrap support for H3AZ19 as seed ortholog is 100%.
Bootstrap support for A3LU96 as seed ortholog is 100%.

Group of orthologs #975. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:193 S.stipitis:193

H3B878              	100.00%		A3LN72              	100.00%
Bootstrap support for H3B878 as seed ortholog is 100%.
Bootstrap support for A3LN72 as seed ortholog is 100%.

Group of orthologs #976. Best score 193 bits
Score difference with first non-orthologous sequence - L.chalumnae:193 S.stipitis:193

H3B568              	100.00%		A3LQS5              	100.00%
Bootstrap support for H3B568 as seed ortholog is 100%.
Bootstrap support for A3LQS5 as seed ortholog is 100%.

Group of orthologs #977. Best score 192 bits
Score difference with first non-orthologous sequence - L.chalumnae:19 S.stipitis:192

H3B3J5              	100.00%		A3LZY0              	100.00%
H3AG02              	49.45%		
H3B3M4              	36.35%		
Bootstrap support for H3B3J5 as seed ortholog is 67%.
Alternative seed ortholog is H3A1W1 (19 bits away from this cluster)
Bootstrap support for A3LZY0 as seed ortholog is 100%.

Group of orthologs #978. Best score 192 bits
Score difference with first non-orthologous sequence - L.chalumnae:192 S.stipitis:192

H3A886              	100.00%		A3LQN4              	100.00%
Bootstrap support for H3A886 as seed ortholog is 100%.
Bootstrap support for A3LQN4 as seed ortholog is 100%.

Group of orthologs #979. Best score 192 bits
Score difference with first non-orthologous sequence - L.chalumnae:192 S.stipitis:192

H3AYH7              	100.00%		A3LU40              	100.00%
Bootstrap support for H3AYH7 as seed ortholog is 100%.
Bootstrap support for A3LU40 as seed ortholog is 100%.

Group of orthologs #980. Best score 192 bits
Score difference with first non-orthologous sequence - L.chalumnae:10 S.stipitis:192

H3B4Q3              	100.00%		A3LVN0              	100.00%
Bootstrap support for H3B4Q3 as seed ortholog is 70%.
Alternative seed ortholog is H3A2U8 (10 bits away from this cluster)
Bootstrap support for A3LVN0 as seed ortholog is 100%.

Group of orthologs #981. Best score 191 bits
Score difference with first non-orthologous sequence - L.chalumnae:191 S.stipitis:191

H3A8I9              	100.00%		A3GH11              	100.00%
H3AD97              	28.31%		
Bootstrap support for H3A8I9 as seed ortholog is 100%.
Bootstrap support for A3GH11 as seed ortholog is 100%.

Group of orthologs #982. Best score 191 bits
Score difference with first non-orthologous sequence - L.chalumnae:191 S.stipitis:191

H2ZV22              	100.00%		A3LQB2              	100.00%
Bootstrap support for H2ZV22 as seed ortholog is 100%.
Bootstrap support for A3LQB2 as seed ortholog is 100%.

Group of orthologs #983. Best score 191 bits
Score difference with first non-orthologous sequence - L.chalumnae:191 S.stipitis:191

H2ZZG3              	100.00%		A3LX44              	100.00%
Bootstrap support for H2ZZG3 as seed ortholog is 100%.
Bootstrap support for A3LX44 as seed ortholog is 100%.

Group of orthologs #984. Best score 191 bits
Score difference with first non-orthologous sequence - L.chalumnae:191 S.stipitis:191

H3ANE2              	100.00%		A3GFW2              	100.00%
Bootstrap support for H3ANE2 as seed ortholog is 100%.
Bootstrap support for A3GFW2 as seed ortholog is 100%.

Group of orthologs #985. Best score 191 bits
Score difference with first non-orthologous sequence - L.chalumnae:191 S.stipitis:191

H3AAG2              	100.00%		A3LWK2              	100.00%
Bootstrap support for H3AAG2 as seed ortholog is 100%.
Bootstrap support for A3LWK2 as seed ortholog is 100%.

Group of orthologs #986. Best score 191 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 S.stipitis:80

H3ASF2              	100.00%		A3LSJ2              	100.00%
Bootstrap support for H3ASF2 as seed ortholog is 87%.
Bootstrap support for A3LSJ2 as seed ortholog is 97%.

Group of orthologs #987. Best score 191 bits
Score difference with first non-orthologous sequence - L.chalumnae:191 S.stipitis:191

H3BFT6              	100.00%		A3GGB0              	100.00%
Bootstrap support for H3BFT6 as seed ortholog is 100%.
Bootstrap support for A3GGB0 as seed ortholog is 100%.

Group of orthologs #988. Best score 191 bits
Score difference with first non-orthologous sequence - L.chalumnae:141 S.stipitis:191

H3BGH2              	100.00%		A3LWT0              	100.00%
Bootstrap support for H3BGH2 as seed ortholog is 99%.
Bootstrap support for A3LWT0 as seed ortholog is 100%.

Group of orthologs #989. Best score 190 bits
Score difference with first non-orthologous sequence - L.chalumnae:39 S.stipitis:190

H3AJ34              	100.00%		A3GHR9              	100.00%
H3B536              	82.76%		
H3B4T8              	81.28%		
M3XHD4              	42.86%		
H3B4T1              	39.41%		
H3ABX5              	8.37%		
Bootstrap support for H3AJ34 as seed ortholog is 94%.
Bootstrap support for A3GHR9 as seed ortholog is 100%.

Group of orthologs #990. Best score 190 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 S.stipitis:190

H3B0E2              	100.00%		A3GH82              	100.00%
H3AS30              	5.77%		
Bootstrap support for H3B0E2 as seed ortholog is 82%.
Bootstrap support for A3GH82 as seed ortholog is 100%.

Group of orthologs #991. Best score 190 bits
Score difference with first non-orthologous sequence - L.chalumnae:190 S.stipitis:41

H3BFV2              	100.00%		A3LSI3              	100.00%
H3B584              	24.53%		
Bootstrap support for H3BFV2 as seed ortholog is 100%.
Bootstrap support for A3LSI3 as seed ortholog is 92%.

Group of orthologs #992. Best score 190 bits
Score difference with first non-orthologous sequence - L.chalumnae:190 S.stipitis:190

H3AL29              	100.00%		A3LZR0              	100.00%
Bootstrap support for H3AL29 as seed ortholog is 100%.
Bootstrap support for A3LZR0 as seed ortholog is 100%.

Group of orthologs #993. Best score 190 bits
Score difference with first non-orthologous sequence - L.chalumnae:38 S.stipitis:190

H3API9              	100.00%		A3LXB0              	100.00%
Bootstrap support for H3API9 as seed ortholog is 94%.
Bootstrap support for A3LXB0 as seed ortholog is 100%.

Group of orthologs #994. Best score 189 bits
Score difference with first non-orthologous sequence - L.chalumnae:189 S.stipitis:189

H3A5H3              	100.00%		A3GFV6              	100.00%
Bootstrap support for H3A5H3 as seed ortholog is 100%.
Bootstrap support for A3GFV6 as seed ortholog is 100%.

Group of orthologs #995. Best score 189 bits
Score difference with first non-orthologous sequence - L.chalumnae:117 S.stipitis:189

H3B5N4              	100.00%		A3LW35              	100.00%
Bootstrap support for H3B5N4 as seed ortholog is 99%.
Bootstrap support for A3LW35 as seed ortholog is 100%.

Group of orthologs #996. Best score 189 bits
Score difference with first non-orthologous sequence - L.chalumnae:189 S.stipitis:189

H3BH31              	100.00%		A3LTJ4              	100.00%
Bootstrap support for H3BH31 as seed ortholog is 100%.
Bootstrap support for A3LTJ4 as seed ortholog is 100%.

Group of orthologs #997. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 S.stipitis:121

H3BBP3              	100.00%		A3LXZ3              	100.00%
H3A183              	11.72%		
M3XKG2              	6.21%		
H3AMG1              	5.98%		
Bootstrap support for H3BBP3 as seed ortholog is 99%.
Bootstrap support for A3LXZ3 as seed ortholog is 99%.

Group of orthologs #998. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 S.stipitis:140

H2ZZ84              	100.00%		A3LQ20              	100.00%
                    	       		A3LN10              	28.10%
Bootstrap support for H2ZZ84 as seed ortholog is 100%.
Bootstrap support for A3LQ20 as seed ortholog is 99%.

Group of orthologs #999. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:145 S.stipitis:188

H2ZSF2              	100.00%		A3GGN3              	100.00%
Bootstrap support for H2ZSF2 as seed ortholog is 100%.
Bootstrap support for A3GGN3 as seed ortholog is 100%.

Group of orthologs #1000. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:188 S.stipitis:188

H3A3E4              	100.00%		A3GF98              	100.00%
Bootstrap support for H3A3E4 as seed ortholog is 100%.
Bootstrap support for A3GF98 as seed ortholog is 100%.

Group of orthologs #1001. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 S.stipitis:188

H3A5R8              	100.00%		A3LYC2              	100.00%
Bootstrap support for H3A5R8 as seed ortholog is 99%.
Bootstrap support for A3LYC2 as seed ortholog is 100%.

Group of orthologs #1002. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:188 S.stipitis:188

H3AUE6              	100.00%		A3LQC7              	100.00%
Bootstrap support for H3AUE6 as seed ortholog is 100%.
Bootstrap support for A3LQC7 as seed ortholog is 100%.

Group of orthologs #1003. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:188 S.stipitis:188

H3B293              	100.00%		A3LS61              	100.00%
Bootstrap support for H3B293 as seed ortholog is 100%.
Bootstrap support for A3LS61 as seed ortholog is 100%.

Group of orthologs #1004. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:188 S.stipitis:188

H3BB50              	100.00%		A3GGF3              	100.00%
Bootstrap support for H3BB50 as seed ortholog is 100%.
Bootstrap support for A3GGF3 as seed ortholog is 100%.

Group of orthologs #1005. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:188 S.stipitis:188

H3B2D8              	100.00%		A3LW97              	100.00%
Bootstrap support for H3B2D8 as seed ortholog is 100%.
Bootstrap support for A3LW97 as seed ortholog is 100%.

Group of orthologs #1006. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:188 S.stipitis:188

H3B512              	100.00%		A3LVM3              	100.00%
Bootstrap support for H3B512 as seed ortholog is 100%.
Bootstrap support for A3LVM3 as seed ortholog is 100%.

Group of orthologs #1007. Best score 188 bits
Score difference with first non-orthologous sequence - L.chalumnae:188 S.stipitis:188

H3BI71              	100.00%		A3LYX3              	100.00%
Bootstrap support for H3BI71 as seed ortholog is 100%.
Bootstrap support for A3LYX3 as seed ortholog is 100%.

Group of orthologs #1008. Best score 187 bits
Score difference with first non-orthologous sequence - L.chalumnae:187 S.stipitis:187

H3AWT4              	100.00%		A3LW88              	100.00%
Bootstrap support for H3AWT4 as seed ortholog is 100%.
Bootstrap support for A3LW88 as seed ortholog is 100%.

Group of orthologs #1009. Best score 187 bits
Score difference with first non-orthologous sequence - L.chalumnae:187 S.stipitis:187

H3BG55              	100.00%		A3LUJ0              	100.00%
Bootstrap support for H3BG55 as seed ortholog is 100%.
Bootstrap support for A3LUJ0 as seed ortholog is 100%.

Group of orthologs #1010. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:35 S.stipitis:186

H3B8N0              	100.00%		A3LXE7              	100.00%
H3BE02              	60.00%		
H3A6T6              	48.00%		
H3A0A2              	37.33%		
Bootstrap support for H3B8N0 as seed ortholog is 98%.
Bootstrap support for A3LXE7 as seed ortholog is 100%.

Group of orthologs #1011. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:186 S.stipitis:186

H3AEC0              	100.00%		A3LRL5              	100.00%
H3A7N4              	77.82%		
H3B9Y3              	73.94%		
Bootstrap support for H3AEC0 as seed ortholog is 100%.
Bootstrap support for A3LRL5 as seed ortholog is 100%.

Group of orthologs #1012. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:186 S.stipitis:186

H3A6K1              	100.00%		A3GGH5              	100.00%
Bootstrap support for H3A6K1 as seed ortholog is 100%.
Bootstrap support for A3GGH5 as seed ortholog is 100%.

Group of orthologs #1013. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:186 S.stipitis:186

H3AC07              	100.00%		A3GGP2              	100.00%
Bootstrap support for H3AC07 as seed ortholog is 100%.
Bootstrap support for A3GGP2 as seed ortholog is 100%.

Group of orthologs #1014. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:186 S.stipitis:186

H3AP59              	100.00%		A3LPD5              	100.00%
Bootstrap support for H3AP59 as seed ortholog is 100%.
Bootstrap support for A3LPD5 as seed ortholog is 100%.

Group of orthologs #1015. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 S.stipitis:113

H3AUV4              	100.00%		A3LRC8              	100.00%
Bootstrap support for H3AUV4 as seed ortholog is 99%.
Bootstrap support for A3LRC8 as seed ortholog is 99%.

Group of orthologs #1016. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:186 S.stipitis:186

H3B0X8              	100.00%		A3GI06              	100.00%
Bootstrap support for H3B0X8 as seed ortholog is 100%.
Bootstrap support for A3GI06 as seed ortholog is 100%.

Group of orthologs #1017. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 S.stipitis:186

H3BCW4              	100.00%		A3LZ48              	100.00%
Bootstrap support for H3BCW4 as seed ortholog is 94%.
Bootstrap support for A3LZ48 as seed ortholog is 100%.

Group of orthologs #1018. Best score 186 bits
Score difference with first non-orthologous sequence - L.chalumnae:186 S.stipitis:186

H3BIA2              	100.00%		A3M007              	100.00%
Bootstrap support for H3BIA2 as seed ortholog is 100%.
Bootstrap support for A3M007 as seed ortholog is 100%.

Group of orthologs #1019. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 S.stipitis:131

H3A8K0              	100.00%		A3M0A3              	100.00%
H2ZW01              	6.16%		
Bootstrap support for H3A8K0 as seed ortholog is 99%.
Bootstrap support for A3M0A3 as seed ortholog is 100%.

Group of orthologs #1020. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:185 S.stipitis:185

H3AZT4              	100.00%		A3M0G9              	100.00%
H3BCQ6              	81.39%		
Bootstrap support for H3AZT4 as seed ortholog is 100%.
Bootstrap support for A3M0G9 as seed ortholog is 100%.

Group of orthologs #1021. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:41 S.stipitis:79

H3BBV9              	100.00%		A3LV75              	100.00%
H3B7V4              	35.32%		
Bootstrap support for H3BBV9 as seed ortholog is 86%.
Bootstrap support for A3LV75 as seed ortholog is 98%.

Group of orthologs #1022. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:185 S.stipitis:185

H3AC68              	100.00%		A3GFG7              	100.00%
Bootstrap support for H3AC68 as seed ortholog is 100%.
Bootstrap support for A3GFG7 as seed ortholog is 100%.

Group of orthologs #1023. Best score 185 bits
Score difference with first non-orthologous sequence - L.chalumnae:185 S.stipitis:185

H3AX22              	100.00%		A3LQ24              	100.00%
Bootstrap support for H3AX22 as seed ortholog is 100%.
Bootstrap support for A3LQ24 as seed ortholog is 100%.

Group of orthologs #1024. Best score 184 bits
Score difference with first non-orthologous sequence - L.chalumnae:184 S.stipitis:78

H3A7U5              	100.00%		A3LWC5              	100.00%
Bootstrap support for H3A7U5 as seed ortholog is 100%.
Bootstrap support for A3LWC5 as seed ortholog is 99%.

Group of orthologs #1025. Best score 184 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 S.stipitis:184

H3A801              	100.00%		A3LZE7              	100.00%
Bootstrap support for H3A801 as seed ortholog is 99%.
Bootstrap support for A3LZE7 as seed ortholog is 100%.

Group of orthologs #1026. Best score 184 bits
Score difference with first non-orthologous sequence - L.chalumnae:184 S.stipitis:184

H3B195              	100.00%		A3GIB9              	100.00%
Bootstrap support for H3B195 as seed ortholog is 100%.
Bootstrap support for A3GIB9 as seed ortholog is 100%.

Group of orthologs #1027. Best score 184 bits
Score difference with first non-orthologous sequence - L.chalumnae:184 S.stipitis:184

H3B857              	100.00%		A3LS30              	100.00%
Bootstrap support for H3B857 as seed ortholog is 100%.
Bootstrap support for A3LS30 as seed ortholog is 100%.

Group of orthologs #1028. Best score 184 bits
Score difference with first non-orthologous sequence - L.chalumnae:184 S.stipitis:184

H3BFC0              	100.00%		A3LS77              	100.00%
Bootstrap support for H3BFC0 as seed ortholog is 100%.
Bootstrap support for A3LS77 as seed ortholog is 100%.

Group of orthologs #1029. Best score 183 bits
Score difference with first non-orthologous sequence - L.chalumnae:183 S.stipitis:95

H3A1D0              	100.00%		A3LMX7              	100.00%
Bootstrap support for H3A1D0 as seed ortholog is 100%.
Bootstrap support for A3LMX7 as seed ortholog is 98%.

Group of orthologs #1030. Best score 183 bits
Score difference with first non-orthologous sequence - L.chalumnae:183 S.stipitis:183

H3AGB4              	100.00%		A3GI05              	100.00%
Bootstrap support for H3AGB4 as seed ortholog is 100%.
Bootstrap support for A3GI05 as seed ortholog is 100%.

Group of orthologs #1031. Best score 183 bits
Score difference with first non-orthologous sequence - L.chalumnae:183 S.stipitis:183

H3AJB8              	100.00%		A3GHK4              	100.00%
Bootstrap support for H3AJB8 as seed ortholog is 100%.
Bootstrap support for A3GHK4 as seed ortholog is 100%.

Group of orthologs #1032. Best score 182 bits
Score difference with first non-orthologous sequence - L.chalumnae:182 S.stipitis:182

H3AY18              	100.00%		A3GGM7              	100.00%
H3AN39              	58.65%		
Bootstrap support for H3AY18 as seed ortholog is 100%.
Bootstrap support for A3GGM7 as seed ortholog is 100%.

Group of orthologs #1033. Best score 182 bits
Score difference with first non-orthologous sequence - L.chalumnae:182 S.stipitis:182

H3BG17              	100.00%		A3GF94              	100.00%
                    	       		A3LV30              	8.89%
Bootstrap support for H3BG17 as seed ortholog is 100%.
Bootstrap support for A3GF94 as seed ortholog is 100%.

Group of orthologs #1034. Best score 182 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 S.stipitis:29

H2ZW91              	100.00%		A3LQ11              	100.00%
Bootstrap support for H2ZW91 as seed ortholog is 98%.
Bootstrap support for A3LQ11 as seed ortholog is 86%.

Group of orthologs #1035. Best score 182 bits
Score difference with first non-orthologous sequence - L.chalumnae:34 S.stipitis:55

H3AVE6              	100.00%		A3LR45              	100.00%
Bootstrap support for H3AVE6 as seed ortholog is 82%.
Bootstrap support for A3LR45 as seed ortholog is 91%.

Group of orthologs #1036. Best score 181 bits
Score difference with first non-orthologous sequence - L.chalumnae:36 S.stipitis:181

M3XID3              	100.00%		A3LS89              	100.00%
H3B275              	54.31%		
H3AAS5              	54.07%		
H2ZYE2              	27.85%		
H3A8G0              	25.32%		
H3BI24              	21.46%		
H3AJ64              	17.54%		
Bootstrap support for M3XID3 as seed ortholog is 82%.
Bootstrap support for A3LS89 as seed ortholog is 100%.

Group of orthologs #1037. Best score 181 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 S.stipitis:181

H3APR1              	100.00%		A3LQ03              	100.00%
H3BGB2              	35.39%		
Bootstrap support for H3APR1 as seed ortholog is 83%.
Bootstrap support for A3LQ03 as seed ortholog is 100%.

Group of orthologs #1038. Best score 181 bits
Score difference with first non-orthologous sequence - L.chalumnae:181 S.stipitis:181

H3BB85              	100.00%		A3LRU3              	100.00%
Bootstrap support for H3BB85 as seed ortholog is 100%.
Bootstrap support for A3LRU3 as seed ortholog is 100%.

Group of orthologs #1039. Best score 181 bits
Score difference with first non-orthologous sequence - L.chalumnae:43 S.stipitis:60

H3BAR5              	100.00%		A3LYH8              	100.00%
Bootstrap support for H3BAR5 as seed ortholog is 87%.
Bootstrap support for A3LYH8 as seed ortholog is 95%.

Group of orthologs #1040. Best score 180 bits
Score difference with first non-orthologous sequence - L.chalumnae:180 S.stipitis:180

H3AC76              	100.00%		A3LN33              	100.00%
M3XL92              	50.78%		
Bootstrap support for H3AC76 as seed ortholog is 100%.
Bootstrap support for A3LN33 as seed ortholog is 100%.

Group of orthologs #1041. Best score 180 bits
Score difference with first non-orthologous sequence - L.chalumnae:180 S.stipitis:180

H3AFN6              	100.00%		A3LNA7              	100.00%
H3AUX5              	33.41%		
Bootstrap support for H3AFN6 as seed ortholog is 100%.
Bootstrap support for A3LNA7 as seed ortholog is 100%.

Group of orthologs #1042. Best score 180 bits
Score difference with first non-orthologous sequence - L.chalumnae:180 S.stipitis:180

H3ARZ7              	100.00%		A3LT53              	100.00%
H3BGK0              	39.26%		
Bootstrap support for H3ARZ7 as seed ortholog is 100%.
Bootstrap support for A3LT53 as seed ortholog is 100%.

Group of orthologs #1043. Best score 180 bits
Score difference with first non-orthologous sequence - L.chalumnae:180 S.stipitis:180

H3AXU6              	100.00%		A3LXT1              	100.00%
H3AFM2              	46.16%		
Bootstrap support for H3AXU6 as seed ortholog is 100%.
Bootstrap support for A3LXT1 as seed ortholog is 100%.

Group of orthologs #1044. Best score 180 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 S.stipitis:180

H3AYW3              	100.00%		A3M047              	100.00%
H2ZWG2              	32.60%		
Bootstrap support for H3AYW3 as seed ortholog is 99%.
Bootstrap support for A3M047 as seed ortholog is 100%.

Group of orthologs #1045. Best score 180 bits
Score difference with first non-orthologous sequence - L.chalumnae:180 S.stipitis:180

H3A3Y8              	100.00%		A3GGU8              	100.00%
Bootstrap support for H3A3Y8 as seed ortholog is 100%.
Bootstrap support for A3GGU8 as seed ortholog is 100%.

Group of orthologs #1046. Best score 180 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 S.stipitis:180

H3AL24              	100.00%		A3LPF7              	100.00%
Bootstrap support for H3AL24 as seed ortholog is 99%.
Bootstrap support for A3LPF7 as seed ortholog is 100%.

Group of orthologs #1047. Best score 180 bits
Score difference with first non-orthologous sequence - L.chalumnae:180 S.stipitis:180

H3AAX8              	100.00%		A3LZW4              	100.00%
Bootstrap support for H3AAX8 as seed ortholog is 100%.
Bootstrap support for A3LZW4 as seed ortholog is 100%.

Group of orthologs #1048. Best score 180 bits
Score difference with first non-orthologous sequence - L.chalumnae:180 S.stipitis:180

H3AJT2              	100.00%		A3M0G0              	100.00%
Bootstrap support for H3AJT2 as seed ortholog is 100%.
Bootstrap support for A3M0G0 as seed ortholog is 100%.

Group of orthologs #1049. Best score 180 bits
Score difference with first non-orthologous sequence - L.chalumnae:180 S.stipitis:180

H3BID1              	100.00%		A3GHD1              	100.00%
Bootstrap support for H3BID1 as seed ortholog is 100%.
Bootstrap support for A3GHD1 as seed ortholog is 100%.

Group of orthologs #1050. Best score 179 bits
Score difference with first non-orthologous sequence - L.chalumnae:179 S.stipitis:118

H3BIA1              	100.00%		A3LRG2              	100.00%
H3B7T3              	56.05%		
H3B0A6              	41.61%		
Bootstrap support for H3BIA1 as seed ortholog is 100%.
Bootstrap support for A3LRG2 as seed ortholog is 99%.

Group of orthologs #1051. Best score 179 bits
Score difference with first non-orthologous sequence - L.chalumnae:27 S.stipitis:54

H3BH13              	100.00%		A3M0I2              	100.00%
H3AW71              	68.52%		
H3AUD4              	41.64%		
Bootstrap support for H3BH13 as seed ortholog is 78%.
Bootstrap support for A3M0I2 as seed ortholog is 89%.

Group of orthologs #1052. Best score 179 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 S.stipitis:179

H3A640              	100.00%		A3M0P2              	100.00%
H2ZV67              	37.99%		
Bootstrap support for H3A640 as seed ortholog is 99%.
Bootstrap support for A3M0P2 as seed ortholog is 100%.

Group of orthologs #1053. Best score 179 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 S.stipitis:41

H3B665              	100.00%		A3LP75              	100.00%
Bootstrap support for H3B665 as seed ortholog is 96%.
Bootstrap support for A3LP75 as seed ortholog is 88%.

Group of orthologs #1054. Best score 179 bits
Score difference with first non-orthologous sequence - L.chalumnae:179 S.stipitis:179

H3B7G8              	100.00%		A3LSA0              	100.00%
Bootstrap support for H3B7G8 as seed ortholog is 100%.
Bootstrap support for A3LSA0 as seed ortholog is 100%.

Group of orthologs #1055. Best score 178 bits
Score difference with first non-orthologous sequence - L.chalumnae:178 S.stipitis:178

H3B527              	100.00%		A3LRM3              	100.00%
H3BFX5              	31.01%		
H3A328              	30.31%		
Bootstrap support for H3B527 as seed ortholog is 100%.
Bootstrap support for A3LRM3 as seed ortholog is 100%.

Group of orthologs #1056. Best score 178 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 S.stipitis:178

H3AMZ3              	100.00%		A3LZT4              	100.00%
Bootstrap support for H3AMZ3 as seed ortholog is 99%.
Bootstrap support for A3LZT4 as seed ortholog is 100%.

Group of orthologs #1057. Best score 178 bits
Score difference with first non-orthologous sequence - L.chalumnae:178 S.stipitis:178

H3BDF2              	100.00%		A3GH31              	100.00%
Bootstrap support for H3BDF2 as seed ortholog is 100%.
Bootstrap support for A3GH31 as seed ortholog is 100%.

Group of orthologs #1058. Best score 178 bits
Score difference with first non-orthologous sequence - L.chalumnae:120 S.stipitis:178

H3B2B4              	100.00%		A3LX25              	100.00%
Bootstrap support for H3B2B4 as seed ortholog is 100%.
Bootstrap support for A3LX25 as seed ortholog is 100%.

Group of orthologs #1059. Best score 178 bits
Score difference with first non-orthologous sequence - L.chalumnae:178 S.stipitis:178

H3B001              	100.00%		A3LZV2              	100.00%
Bootstrap support for H3B001 as seed ortholog is 100%.
Bootstrap support for A3LZV2 as seed ortholog is 100%.

Group of orthologs #1060. Best score 177 bits
Score difference with first non-orthologous sequence - L.chalumnae:177 S.stipitis:177

H3B169              	100.00%		A3LX38              	100.00%
H2ZYV3              	25.10%		
H2ZTW7              	21.34%		
H3A6F5              	19.25%		
H3B4N0              	17.15%		
H3A8L1              	5.86%		
Bootstrap support for H3B169 as seed ortholog is 100%.
Bootstrap support for A3LX38 as seed ortholog is 100%.

Group of orthologs #1061. Best score 177 bits
Score difference with first non-orthologous sequence - L.chalumnae:177 S.stipitis:177

H3AAB6              	100.00%		A3LU67              	100.00%
Bootstrap support for H3AAB6 as seed ortholog is 100%.
Bootstrap support for A3LU67 as seed ortholog is 100%.

Group of orthologs #1062. Best score 177 bits
Score difference with first non-orthologous sequence - L.chalumnae:177 S.stipitis:177

H3AU57              	100.00%		A3LPG1              	100.00%
Bootstrap support for H3AU57 as seed ortholog is 100%.
Bootstrap support for A3LPG1 as seed ortholog is 100%.

Group of orthologs #1063. Best score 177 bits
Score difference with first non-orthologous sequence - L.chalumnae:177 S.stipitis:177

H3B205              	100.00%		A3LSX2              	100.00%
Bootstrap support for H3B205 as seed ortholog is 100%.
Bootstrap support for A3LSX2 as seed ortholog is 100%.

Group of orthologs #1064. Best score 176 bits
Score difference with first non-orthologous sequence - L.chalumnae:176 S.stipitis:176

H3AEW1              	100.00%		A3LVQ8              	100.00%
Bootstrap support for H3AEW1 as seed ortholog is 100%.
Bootstrap support for A3LVQ8 as seed ortholog is 100%.

Group of orthologs #1065. Best score 176 bits
Score difference with first non-orthologous sequence - L.chalumnae:176 S.stipitis:176

H3AGY0              	100.00%		A3LZB0              	100.00%
Bootstrap support for H3AGY0 as seed ortholog is 100%.
Bootstrap support for A3LZB0 as seed ortholog is 100%.

Group of orthologs #1066. Best score 176 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 S.stipitis:176

H3AXG8              	100.00%		A3LZH1              	100.00%
Bootstrap support for H3AXG8 as seed ortholog is 100%.
Bootstrap support for A3LZH1 as seed ortholog is 100%.

Group of orthologs #1067. Best score 176 bits
Score difference with first non-orthologous sequence - L.chalumnae:176 S.stipitis:176

H3BGA2              	100.00%		A3LXM0              	100.00%
Bootstrap support for H3BGA2 as seed ortholog is 100%.
Bootstrap support for A3LXM0 as seed ortholog is 100%.

Group of orthologs #1068. Best score 175 bits
Score difference with first non-orthologous sequence - L.chalumnae:175 S.stipitis:175

H3AA15              	100.00%		A3LPN3              	100.00%
                    	       		A3LSP4              	87.77%
Bootstrap support for H3AA15 as seed ortholog is 100%.
Bootstrap support for A3LPN3 as seed ortholog is 100%.

Group of orthologs #1069. Best score 175 bits
Score difference with first non-orthologous sequence - L.chalumnae:175 S.stipitis:175

H3AJU8              	100.00%		A3GHS1              	100.00%
Bootstrap support for H3AJU8 as seed ortholog is 100%.
Bootstrap support for A3GHS1 as seed ortholog is 100%.

Group of orthologs #1070. Best score 175 bits
Score difference with first non-orthologous sequence - L.chalumnae:175 S.stipitis:175

H3BIF8              	100.00%		A3LVF4              	100.00%
Bootstrap support for H3BIF8 as seed ortholog is 100%.
Bootstrap support for A3LVF4 as seed ortholog is 100%.

Group of orthologs #1071. Best score 174 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 S.stipitis:174

H3B5M9              	100.00%		A3LNS5              	100.00%
H3ADF7              	42.89%		
Bootstrap support for H3B5M9 as seed ortholog is 99%.
Bootstrap support for A3LNS5 as seed ortholog is 100%.

Group of orthologs #1072. Best score 174 bits
Score difference with first non-orthologous sequence - L.chalumnae:174 S.stipitis:174

H3A243              	100.00%		A3GHP2              	100.00%
Bootstrap support for H3A243 as seed ortholog is 100%.
Bootstrap support for A3GHP2 as seed ortholog is 100%.

Group of orthologs #1073. Best score 174 bits
Score difference with first non-orthologous sequence - L.chalumnae:174 S.stipitis:174

H3AGN4              	100.00%		A3LP14              	100.00%
Bootstrap support for H3AGN4 as seed ortholog is 100%.
Bootstrap support for A3LP14 as seed ortholog is 100%.

Group of orthologs #1074. Best score 174 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 S.stipitis:174

H3B131              	100.00%		A3LTJ0              	100.00%
Bootstrap support for H3B131 as seed ortholog is 98%.
Bootstrap support for A3LTJ0 as seed ortholog is 100%.

Group of orthologs #1075. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:8 S.stipitis:173

H3ASX0              	100.00%		A3LW70              	100.00%
H3A878              	11.86%		
Bootstrap support for H3ASX0 as seed ortholog is 57%.
Alternative seed ortholog is H3A6Z8 (8 bits away from this cluster)
Bootstrap support for A3LW70 as seed ortholog is 100%.

Group of orthologs #1076. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:173 S.stipitis:173

H3A8B6              	100.00%		A3GG10              	100.00%
Bootstrap support for H3A8B6 as seed ortholog is 100%.
Bootstrap support for A3GG10 as seed ortholog is 100%.

Group of orthologs #1077. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:173 S.stipitis:173

H3AMK4              	100.00%		A3GHH8              	100.00%
Bootstrap support for H3AMK4 as seed ortholog is 100%.
Bootstrap support for A3GHH8 as seed ortholog is 100%.

Group of orthologs #1078. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 S.stipitis:51

H3AU30              	100.00%		A3LQA8              	100.00%
Bootstrap support for H3AU30 as seed ortholog is 94%.
Bootstrap support for A3LQA8 as seed ortholog is 88%.

Group of orthologs #1079. Best score 173 bits
Score difference with first non-orthologous sequence - L.chalumnae:173 S.stipitis:173

H3ATK7              	100.00%		A3LR67              	100.00%
Bootstrap support for H3ATK7 as seed ortholog is 100%.
Bootstrap support for A3LR67 as seed ortholog is 100%.

Group of orthologs #1080. Best score 172 bits
Score difference with first non-orthologous sequence - L.chalumnae:43 S.stipitis:172

H2ZZP4              	100.00%		A3LXE6              	100.00%
H3A427              	100.00%		A3LZZ1              	100.00%
H2ZS39              	68.04%		
H3A2S8              	61.86%		
H3A485              	55.67%		
H3A5E7              	29.90%		
H3AQ34              	6.12%		
Bootstrap support for H2ZZP4 as seed ortholog is 97%.
Bootstrap support for H3A427 as seed ortholog is 99%.
Bootstrap support for A3LXE6 as seed ortholog is 100%.
Bootstrap support for A3LZZ1 as seed ortholog is 100%.

Group of orthologs #1081. Best score 172 bits
Score difference with first non-orthologous sequence - L.chalumnae:30 S.stipitis:94

H3AVR2              	100.00%		A3LZT1              	100.00%
H3BI91              	51.58%		
Bootstrap support for H3AVR2 as seed ortholog is 97%.
Bootstrap support for A3LZT1 as seed ortholog is 99%.

Group of orthologs #1082. Best score 172 bits
Score difference with first non-orthologous sequence - L.chalumnae:172 S.stipitis:172

H3ADU9              	100.00%		A3GI00              	100.00%
Bootstrap support for H3ADU9 as seed ortholog is 100%.
Bootstrap support for A3GI00 as seed ortholog is 100%.

Group of orthologs #1083. Best score 172 bits
Score difference with first non-orthologous sequence - L.chalumnae:172 S.stipitis:172

H3ARF8              	100.00%		A3LQV6              	100.00%
Bootstrap support for H3ARF8 as seed ortholog is 100%.
Bootstrap support for A3LQV6 as seed ortholog is 100%.

Group of orthologs #1084. Best score 172 bits
Score difference with first non-orthologous sequence - L.chalumnae:172 S.stipitis:172

H3B0K1              	100.00%		A3LNR7              	100.00%
Bootstrap support for H3B0K1 as seed ortholog is 100%.
Bootstrap support for A3LNR7 as seed ortholog is 100%.

Group of orthologs #1085. Best score 172 bits
Score difference with first non-orthologous sequence - L.chalumnae:172 S.stipitis:172

H3BBK7              	100.00%		A3LWQ7              	100.00%
Bootstrap support for H3BBK7 as seed ortholog is 100%.
Bootstrap support for A3LWQ7 as seed ortholog is 100%.

Group of orthologs #1086. Best score 171 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 S.stipitis:171

H3BA10              	100.00%		A3LPM6              	100.00%
H3AI08              	27.14%		A3LSX4              	14.29%
H3AG72              	21.15%		
Bootstrap support for H3BA10 as seed ortholog is 99%.
Bootstrap support for A3LPM6 as seed ortholog is 100%.

Group of orthologs #1087. Best score 171 bits
Score difference with first non-orthologous sequence - L.chalumnae:171 S.stipitis:171

H2ZX30              	100.00%		A3GFJ9              	100.00%
Bootstrap support for H2ZX30 as seed ortholog is 100%.
Bootstrap support for A3GFJ9 as seed ortholog is 100%.

Group of orthologs #1088. Best score 171 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 S.stipitis:171

H2ZV98              	100.00%		A3LNY2              	100.00%
Bootstrap support for H2ZV98 as seed ortholog is 99%.
Bootstrap support for A3LNY2 as seed ortholog is 100%.

Group of orthologs #1089. Best score 171 bits
Score difference with first non-orthologous sequence - L.chalumnae:171 S.stipitis:171

H3A7W2              	100.00%		A3LV46              	100.00%
Bootstrap support for H3A7W2 as seed ortholog is 100%.
Bootstrap support for A3LV46 as seed ortholog is 100%.

Group of orthologs #1090. Best score 171 bits
Score difference with first non-orthologous sequence - L.chalumnae:171 S.stipitis:171

H3ARU3              	100.00%		A3LMY8              	100.00%
Bootstrap support for H3ARU3 as seed ortholog is 100%.
Bootstrap support for A3LMY8 as seed ortholog is 100%.

Group of orthologs #1091. Best score 171 bits
Score difference with first non-orthologous sequence - L.chalumnae:171 S.stipitis:171

H3B5P7              	100.00%		A3LSK0              	100.00%
Bootstrap support for H3B5P7 as seed ortholog is 100%.
Bootstrap support for A3LSK0 as seed ortholog is 100%.

Group of orthologs #1092. Best score 171 bits
Score difference with first non-orthologous sequence - L.chalumnae:171 S.stipitis:171

H3BAE2              	100.00%		A3LWU4              	100.00%
Bootstrap support for H3BAE2 as seed ortholog is 100%.
Bootstrap support for A3LWU4 as seed ortholog is 100%.

Group of orthologs #1093. Best score 170 bits
Score difference with first non-orthologous sequence - L.chalumnae:170 S.stipitis:170

H2ZZ94              	100.00%		A3LNF6              	100.00%
H3BI83              	31.81%		
Bootstrap support for H2ZZ94 as seed ortholog is 100%.
Bootstrap support for A3LNF6 as seed ortholog is 100%.

Group of orthologs #1094. Best score 170 bits
Score difference with first non-orthologous sequence - L.chalumnae:170 S.stipitis:170

H3AN43              	100.00%		A3GH50              	100.00%
H3AHV6              	18.58%		
Bootstrap support for H3AN43 as seed ortholog is 100%.
Bootstrap support for A3GH50 as seed ortholog is 100%.

Group of orthologs #1095. Best score 170 bits
Score difference with first non-orthologous sequence - L.chalumnae:170 S.stipitis:170

H3AM32              	100.00%		A3LP33              	100.00%
H2ZS30              	19.52%		
Bootstrap support for H3AM32 as seed ortholog is 100%.
Bootstrap support for A3LP33 as seed ortholog is 100%.

Group of orthologs #1096. Best score 170 bits
Score difference with first non-orthologous sequence - L.chalumnae:170 S.stipitis:170

H3A9W2              	100.00%		A3GF63              	100.00%
Bootstrap support for H3A9W2 as seed ortholog is 100%.
Bootstrap support for A3GF63 as seed ortholog is 100%.

Group of orthologs #1097. Best score 170 bits
Score difference with first non-orthologous sequence - L.chalumnae:170 S.stipitis:170

H3AJA5              	100.00%		A3GEZ9              	100.00%
Bootstrap support for H3AJA5 as seed ortholog is 100%.
Bootstrap support for A3GEZ9 as seed ortholog is 100%.

Group of orthologs #1098. Best score 170 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 S.stipitis:46

H3A6U6              	100.00%		A3LVB6              	100.00%
Bootstrap support for H3A6U6 as seed ortholog is 93%.
Bootstrap support for A3LVB6 as seed ortholog is 88%.

Group of orthologs #1099. Best score 170 bits
Score difference with first non-orthologous sequence - L.chalumnae:170 S.stipitis:170

H3AWR4              	100.00%		A3LVI9              	100.00%
Bootstrap support for H3AWR4 as seed ortholog is 100%.
Bootstrap support for A3LVI9 as seed ortholog is 100%.

Group of orthologs #1100. Best score 169 bits
Score difference with first non-orthologous sequence - L.chalumnae:169 S.stipitis:169

H2ZVN7              	100.00%		A3LPF8              	100.00%
H3AQU4              	62.37%		
H3B2N2              	42.16%		
Bootstrap support for H2ZVN7 as seed ortholog is 100%.
Bootstrap support for A3LPF8 as seed ortholog is 100%.

Group of orthologs #1101. Best score 169 bits
Score difference with first non-orthologous sequence - L.chalumnae:169 S.stipitis:169

H3AUG1              	100.00%		A3LVK6              	100.00%
Bootstrap support for H3AUG1 as seed ortholog is 100%.
Bootstrap support for A3LVK6 as seed ortholog is 100%.

Group of orthologs #1102. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 S.stipitis:168

H3ARI4              	100.00%		A3GFC5              	100.00%
Bootstrap support for H3ARI4 as seed ortholog is 100%.
Bootstrap support for A3GFC5 as seed ortholog is 100%.

Group of orthologs #1103. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 S.stipitis:168

H3AWI4              	100.00%		A3LUC2              	100.00%
Bootstrap support for H3AWI4 as seed ortholog is 100%.
Bootstrap support for A3LUC2 as seed ortholog is 100%.

Group of orthologs #1104. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 S.stipitis:168

H3BCS7              	100.00%		A3LQA4              	100.00%
Bootstrap support for H3BCS7 as seed ortholog is 100%.
Bootstrap support for A3LQA4 as seed ortholog is 100%.

Group of orthologs #1105. Best score 168 bits
Score difference with first non-orthologous sequence - L.chalumnae:168 S.stipitis:168

H3BA94              	100.00%		A3LX85              	100.00%
Bootstrap support for H3BA94 as seed ortholog is 100%.
Bootstrap support for A3LX85 as seed ortholog is 100%.

Group of orthologs #1106. Best score 167 bits
Score difference with first non-orthologous sequence - L.chalumnae:167 S.stipitis:167

H3AM73              	100.00%		A3LRK0              	100.00%
H2ZSD7              	15.44%		
Bootstrap support for H3AM73 as seed ortholog is 100%.
Bootstrap support for A3LRK0 as seed ortholog is 100%.

Group of orthologs #1107. Best score 167 bits
Score difference with first non-orthologous sequence - L.chalumnae:167 S.stipitis:167

H3B488              	100.00%		A3GGI9              	100.00%
                    	       		A3GGM0              	28.87%
Bootstrap support for H3B488 as seed ortholog is 100%.
Bootstrap support for A3GGI9 as seed ortholog is 100%.

Group of orthologs #1108. Best score 167 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 S.stipitis:167

H3A9G6              	100.00%		A3LNI6              	100.00%
Bootstrap support for H3A9G6 as seed ortholog is 99%.
Bootstrap support for A3LNI6 as seed ortholog is 100%.

Group of orthologs #1109. Best score 167 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 S.stipitis:167

H3APF5              	100.00%		A3LVB4              	100.00%
Bootstrap support for H3APF5 as seed ortholog is 99%.
Bootstrap support for A3LVB4 as seed ortholog is 100%.

Group of orthologs #1110. Best score 167 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 S.stipitis:167

H3AYS0              	100.00%		A3LP31              	100.00%
Bootstrap support for H3AYS0 as seed ortholog is 99%.
Bootstrap support for A3LP31 as seed ortholog is 100%.

Group of orthologs #1111. Best score 167 bits
Score difference with first non-orthologous sequence - L.chalumnae:167 S.stipitis:167

H3BH19              	100.00%		A3LRF6              	100.00%
Bootstrap support for H3BH19 as seed ortholog is 100%.
Bootstrap support for A3LRF6 as seed ortholog is 100%.

Group of orthologs #1112. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:166 S.stipitis:166

H3BDH3              	100.00%		A3M014              	100.00%
                    	       		A3LRY0              	50.69%
Bootstrap support for H3BDH3 as seed ortholog is 100%.
Bootstrap support for A3M014 as seed ortholog is 100%.

Group of orthologs #1113. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:166 S.stipitis:166

H3AAY2              	100.00%		A3LV74              	100.00%
Bootstrap support for H3AAY2 as seed ortholog is 100%.
Bootstrap support for A3LV74 as seed ortholog is 100%.

Group of orthologs #1114. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:166 S.stipitis:166

H3ADV7              	100.00%		A3LXC2              	100.00%
Bootstrap support for H3ADV7 as seed ortholog is 100%.
Bootstrap support for A3LXC2 as seed ortholog is 100%.

Group of orthologs #1115. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:166 S.stipitis:166

H3AUK5              	100.00%		A3GFY9              	100.00%
Bootstrap support for H3AUK5 as seed ortholog is 100%.
Bootstrap support for A3GFY9 as seed ortholog is 100%.

Group of orthologs #1116. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:166 S.stipitis:166

H3B0K7              	100.00%		A3LW33              	100.00%
Bootstrap support for H3B0K7 as seed ortholog is 100%.
Bootstrap support for A3LW33 as seed ortholog is 100%.

Group of orthologs #1117. Best score 166 bits
Score difference with first non-orthologous sequence - L.chalumnae:166 S.stipitis:166

H3BIS6              	100.00%		A3LXP5              	100.00%
Bootstrap support for H3BIS6 as seed ortholog is 100%.
Bootstrap support for A3LXP5 as seed ortholog is 100%.

Group of orthologs #1118. Best score 165 bits
Score difference with first non-orthologous sequence - L.chalumnae:165 S.stipitis:165

H2ZW30              	100.00%		A3LSM5              	100.00%
H3BH60              	41.91%		A3M034              	14.36%
H3AN91              	38.65%		
Bootstrap support for H2ZW30 as seed ortholog is 100%.
Bootstrap support for A3LSM5 as seed ortholog is 100%.

Group of orthologs #1119. Best score 165 bits
Score difference with first non-orthologous sequence - L.chalumnae:165 S.stipitis:116

H3A8C7              	100.00%		A3LZ31              	100.00%
H3B6M5              	20.44%		
Bootstrap support for H3A8C7 as seed ortholog is 100%.
Bootstrap support for A3LZ31 as seed ortholog is 98%.

Group of orthologs #1120. Best score 165 bits
Score difference with first non-orthologous sequence - L.chalumnae:165 S.stipitis:165

H3A1U3              	100.00%		A3GFD9              	100.00%
Bootstrap support for H3A1U3 as seed ortholog is 100%.
Bootstrap support for A3GFD9 as seed ortholog is 100%.

Group of orthologs #1121. Best score 165 bits
Score difference with first non-orthologous sequence - L.chalumnae:165 S.stipitis:165

H2ZVH4              	100.00%		A3LTS4              	100.00%
Bootstrap support for H2ZVH4 as seed ortholog is 100%.
Bootstrap support for A3LTS4 as seed ortholog is 100%.

Group of orthologs #1122. Best score 165 bits
Score difference with first non-orthologous sequence - L.chalumnae:165 S.stipitis:165

H3A5P0              	100.00%		A3LQ40              	100.00%
Bootstrap support for H3A5P0 as seed ortholog is 100%.
Bootstrap support for A3LQ40 as seed ortholog is 100%.

Group of orthologs #1123. Best score 165 bits
Score difference with first non-orthologous sequence - L.chalumnae:165 S.stipitis:165

H3AQQ6              	100.00%		A3LNA4              	100.00%
Bootstrap support for H3AQQ6 as seed ortholog is 100%.
Bootstrap support for A3LNA4 as seed ortholog is 100%.

Group of orthologs #1124. Best score 165 bits
Score difference with first non-orthologous sequence - L.chalumnae:165 S.stipitis:165

H3AQ54              	100.00%		A3LQ90              	100.00%
Bootstrap support for H3AQ54 as seed ortholog is 100%.
Bootstrap support for A3LQ90 as seed ortholog is 100%.

Group of orthologs #1125. Best score 164 bits
Score difference with first non-orthologous sequence - L.chalumnae:164 S.stipitis:164

H2ZSD2              	100.00%		A3GEW2              	100.00%
H3B112              	78.59%		
Bootstrap support for H2ZSD2 as seed ortholog is 100%.
Bootstrap support for A3GEW2 as seed ortholog is 100%.

Group of orthologs #1126. Best score 164 bits
Score difference with first non-orthologous sequence - L.chalumnae:164 S.stipitis:164

H3A1A8              	100.00%		A3GFV1              	100.00%
Bootstrap support for H3A1A8 as seed ortholog is 100%.
Bootstrap support for A3GFV1 as seed ortholog is 100%.

Group of orthologs #1127. Best score 164 bits
Score difference with first non-orthologous sequence - L.chalumnae:164 S.stipitis:164

H3A8N6              	100.00%		A3LZ66              	100.00%
Bootstrap support for H3A8N6 as seed ortholog is 100%.
Bootstrap support for A3LZ66 as seed ortholog is 100%.

Group of orthologs #1128. Best score 164 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 S.stipitis:164

H3B8Y0              	100.00%		A3LQN2              	100.00%
Bootstrap support for H3B8Y0 as seed ortholog is 100%.
Bootstrap support for A3LQN2 as seed ortholog is 100%.

Group of orthologs #1129. Best score 164 bits
Score difference with first non-orthologous sequence - L.chalumnae:164 S.stipitis:164

H3BBP1              	100.00%		A3LP18              	100.00%
Bootstrap support for H3BBP1 as seed ortholog is 100%.
Bootstrap support for A3LP18 as seed ortholog is 100%.

Group of orthologs #1130. Best score 164 bits
Score difference with first non-orthologous sequence - L.chalumnae:164 S.stipitis:164

H3BIR1              	100.00%		A3LQU1              	100.00%
Bootstrap support for H3BIR1 as seed ortholog is 100%.
Bootstrap support for A3LQU1 as seed ortholog is 100%.

Group of orthologs #1131. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 S.stipitis:163

H2ZXY3              	100.00%		A3LNX5              	100.00%
H3AL65              	41.15%		
H3AK84              	33.80%		
M3XKG6              	27.24%		
H3AGL5              	14.31%		
Bootstrap support for H2ZXY3 as seed ortholog is 100%.
Bootstrap support for A3LNX5 as seed ortholog is 100%.

Group of orthologs #1132. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 S.stipitis:163

H3AH62              	100.00%		A3LVL7              	100.00%
H2ZYB1              	30.39%		
Bootstrap support for H3AH62 as seed ortholog is 100%.
Bootstrap support for A3LVL7 as seed ortholog is 100%.

Group of orthologs #1133. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 S.stipitis:163

H3BI78              	100.00%		A3LR76              	100.00%
H3AUQ3              	65.99%		
Bootstrap support for H3BI78 as seed ortholog is 100%.
Bootstrap support for A3LR76 as seed ortholog is 100%.

Group of orthologs #1134. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 S.stipitis:163

H2ZZT7              	100.00%		A3LQ88              	100.00%
Bootstrap support for H2ZZT7 as seed ortholog is 100%.
Bootstrap support for A3LQ88 as seed ortholog is 100%.

Group of orthologs #1135. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 S.stipitis:163

H2ZXN9              	100.00%		A3LZK8              	100.00%
Bootstrap support for H2ZXN9 as seed ortholog is 100%.
Bootstrap support for A3LZK8 as seed ortholog is 100%.

Group of orthologs #1136. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 S.stipitis:163

H3AIF3              	100.00%		A3GG44              	100.00%
Bootstrap support for H3AIF3 as seed ortholog is 100%.
Bootstrap support for A3GG44 as seed ortholog is 100%.

Group of orthologs #1137. Best score 163 bits
Score difference with first non-orthologous sequence - L.chalumnae:163 S.stipitis:163

H3ABP8              	100.00%		A3LVR8              	100.00%
Bootstrap support for H3ABP8 as seed ortholog is 100%.
Bootstrap support for A3LVR8 as seed ortholog is 100%.

Group of orthologs #1138. Best score 162 bits
Score difference with first non-orthologous sequence - L.chalumnae:162 S.stipitis:162

H2ZZW1              	100.00%		A3GHB2              	100.00%
Bootstrap support for H2ZZW1 as seed ortholog is 100%.
Bootstrap support for A3GHB2 as seed ortholog is 100%.

Group of orthologs #1139. Best score 162 bits
Score difference with first non-orthologous sequence - L.chalumnae:95 S.stipitis:162

H3A885              	100.00%		A3GF77              	100.00%
Bootstrap support for H3A885 as seed ortholog is 98%.
Bootstrap support for A3GF77 as seed ortholog is 100%.

Group of orthologs #1140. Best score 162 bits
Score difference with first non-orthologous sequence - L.chalumnae:162 S.stipitis:162

H3B0Y4              	100.00%		A3LV31              	100.00%
Bootstrap support for H3B0Y4 as seed ortholog is 100%.
Bootstrap support for A3LV31 as seed ortholog is 100%.

Group of orthologs #1141. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 S.stipitis:161

H3AEI9              	100.00%		A3M043              	100.00%
H3B9U4              	37.24%		
H3ABR7              	22.32%		
H3BDG0              	17.71%		
Bootstrap support for H3AEI9 as seed ortholog is 99%.
Bootstrap support for A3M043 as seed ortholog is 100%.

Group of orthologs #1142. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 S.stipitis:4

H3B4I5              	100.00%		A3LN40              	100.00%
H3B2D2              	31.39%		
H3A7G3              	18.76%		
Bootstrap support for H3B4I5 as seed ortholog is 100%.
Bootstrap support for A3LN40 as seed ortholog is 56%.
Alternative seed ortholog is A3LUL4 (4 bits away from this cluster)

Group of orthologs #1143. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 S.stipitis:161

H2ZSV5              	100.00%		A3GI73              	100.00%
                    	       		A3LMU3              	16.18%
Bootstrap support for H2ZSV5 as seed ortholog is 100%.
Bootstrap support for A3GI73 as seed ortholog is 100%.

Group of orthologs #1144. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 S.stipitis:161

H3B655              	100.00%		A3LXS1              	100.00%
H3AS63              	55.56%		
Bootstrap support for H3B655 as seed ortholog is 100%.
Bootstrap support for A3LXS1 as seed ortholog is 100%.

Group of orthologs #1145. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 S.stipitis:161

H3AQ57              	100.00%		A3LVC5              	100.00%
Bootstrap support for H3AQ57 as seed ortholog is 100%.
Bootstrap support for A3LVC5 as seed ortholog is 100%.

Group of orthologs #1146. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 S.stipitis:161

H3AY70              	100.00%		A3M0L5              	100.00%
Bootstrap support for H3AY70 as seed ortholog is 100%.
Bootstrap support for A3M0L5 as seed ortholog is 100%.

Group of orthologs #1147. Best score 161 bits
Score difference with first non-orthologous sequence - L.chalumnae:161 S.stipitis:161

H3B3H8              	100.00%		A3M097              	100.00%
Bootstrap support for H3B3H8 as seed ortholog is 100%.
Bootstrap support for A3M097 as seed ortholog is 100%.

Group of orthologs #1148. Best score 160 bits
Score difference with first non-orthologous sequence - L.chalumnae:160 S.stipitis:38

H3AEL2              	100.00%		A3LQ29              	100.00%
H3AE92              	51.54%		
Bootstrap support for H3AEL2 as seed ortholog is 100%.
Bootstrap support for A3LQ29 as seed ortholog is 85%.

Group of orthologs #1149. Best score 160 bits
Score difference with first non-orthologous sequence - L.chalumnae:160 S.stipitis:160

H3AMA5              	100.00%		A3LR70              	100.00%
H3A7M7              	6.53%		
Bootstrap support for H3AMA5 as seed ortholog is 100%.
Bootstrap support for A3LR70 as seed ortholog is 100%.

Group of orthologs #1150. Best score 160 bits
Score difference with first non-orthologous sequence - L.chalumnae:160 S.stipitis:160

H3BG15              	100.00%		A3LWL7              	100.00%
                    	       		A3LPU2              	8.38%
Bootstrap support for H3BG15 as seed ortholog is 100%.
Bootstrap support for A3LWL7 as seed ortholog is 100%.

Group of orthologs #1151. Best score 160 bits
Score difference with first non-orthologous sequence - L.chalumnae:160 S.stipitis:160

H2ZTN8              	100.00%		A3LTD6              	100.00%
Bootstrap support for H2ZTN8 as seed ortholog is 100%.
Bootstrap support for A3LTD6 as seed ortholog is 100%.

Group of orthologs #1152. Best score 160 bits
Score difference with first non-orthologous sequence - L.chalumnae:160 S.stipitis:160

H2ZWR9              	100.00%		A3LRM2              	100.00%
Bootstrap support for H2ZWR9 as seed ortholog is 100%.
Bootstrap support for A3LRM2 as seed ortholog is 100%.

Group of orthologs #1153. Best score 160 bits
Score difference with first non-orthologous sequence - L.chalumnae:160 S.stipitis:160

H3AMD3              	100.00%		A3LWK7              	100.00%
Bootstrap support for H3AMD3 as seed ortholog is 100%.
Bootstrap support for A3LWK7 as seed ortholog is 100%.

Group of orthologs #1154. Best score 160 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 S.stipitis:99

H3AYS2              	100.00%		A3LUE8              	100.00%
Bootstrap support for H3AYS2 as seed ortholog is 99%.
Bootstrap support for A3LUE8 as seed ortholog is 99%.

Group of orthologs #1155. Best score 160 bits
Score difference with first non-orthologous sequence - L.chalumnae:160 S.stipitis:160

H3B812              	100.00%		A3GIA4              	100.00%
Bootstrap support for H3B812 as seed ortholog is 100%.
Bootstrap support for A3GIA4 as seed ortholog is 100%.

Group of orthologs #1156. Best score 159 bits
Score difference with first non-orthologous sequence - L.chalumnae:34 S.stipitis:159

H3AF61              	100.00%		A3LYF5              	100.00%
M3XJ20              	32.83%		
Bootstrap support for H3AF61 as seed ortholog is 76%.
Bootstrap support for A3LYF5 as seed ortholog is 100%.

Group of orthologs #1157. Best score 159 bits
Score difference with first non-orthologous sequence - L.chalumnae:159 S.stipitis:159

H3AI81              	100.00%		F5Y6K2              	100.00%
H3BES1              	12.47%		
Bootstrap support for H3AI81 as seed ortholog is 100%.
Bootstrap support for F5Y6K2 as seed ortholog is 100%.

Group of orthologs #1158. Best score 159 bits
Score difference with first non-orthologous sequence - L.chalumnae:159 S.stipitis:159

H3AMD1              	100.00%		A3LXS4              	100.00%
H3B8W2              	34.94%		
Bootstrap support for H3AMD1 as seed ortholog is 100%.
Bootstrap support for A3LXS4 as seed ortholog is 100%.

Group of orthologs #1159. Best score 159 bits
Score difference with first non-orthologous sequence - L.chalumnae:159 S.stipitis:159

H3AHH1              	100.00%		A3LPA4              	100.00%
Bootstrap support for H3AHH1 as seed ortholog is 100%.
Bootstrap support for A3LPA4 as seed ortholog is 100%.

Group of orthologs #1160. Best score 159 bits
Score difference with first non-orthologous sequence - L.chalumnae:159 S.stipitis:159

H3B8C1              	100.00%		A3GGZ2              	100.00%
Bootstrap support for H3B8C1 as seed ortholog is 100%.
Bootstrap support for A3GGZ2 as seed ortholog is 100%.

Group of orthologs #1161. Best score 159 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 S.stipitis:9

H3B0X0              	100.00%		A3LU34              	100.00%
Bootstrap support for H3B0X0 as seed ortholog is 93%.
Bootstrap support for A3LU34 as seed ortholog is 56%.
Alternative seed ortholog is A3LSC5 (9 bits away from this cluster)

Group of orthologs #1162. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 S.stipitis:158

H3AJ48              	100.00%		A3GF53              	100.00%
H3B7P6              	39.63%		
H3B3U3              	31.99%		
H3B7J9              	24.66%		
Bootstrap support for H3AJ48 as seed ortholog is 99%.
Bootstrap support for A3GF53 as seed ortholog is 100%.

Group of orthologs #1163. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:158 S.stipitis:158

H3AGQ4              	100.00%		A3GHY7              	100.00%
H3ABM3              	93.16%		
Bootstrap support for H3AGQ4 as seed ortholog is 100%.
Bootstrap support for A3GHY7 as seed ortholog is 100%.

Group of orthologs #1164. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 S.stipitis:95

H3AJ63              	100.00%		A3LPD4              	100.00%
Bootstrap support for H3AJ63 as seed ortholog is 99%.
Bootstrap support for A3LPD4 as seed ortholog is 98%.

Group of orthologs #1165. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 S.stipitis:158

H3AVH8              	100.00%		A3GHC1              	100.00%
Bootstrap support for H3AVH8 as seed ortholog is 98%.
Bootstrap support for A3GHC1 as seed ortholog is 100%.

Group of orthologs #1166. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 S.stipitis:158

H3AWP7              	100.00%		A3GHQ2              	100.00%
Bootstrap support for H3AWP7 as seed ortholog is 98%.
Bootstrap support for A3GHQ2 as seed ortholog is 100%.

Group of orthologs #1167. Best score 158 bits
Score difference with first non-orthologous sequence - L.chalumnae:158 S.stipitis:158

H3AVH6              	100.00%		A3LRP1              	100.00%
Bootstrap support for H3AVH6 as seed ortholog is 100%.
Bootstrap support for A3LRP1 as seed ortholog is 100%.

Group of orthologs #1168. Best score 157 bits
Score difference with first non-orthologous sequence - L.chalumnae:28 S.stipitis:53

H2ZW17              	100.00%		A3LWZ7              	100.00%
H3A967              	8.24%		A3LRW8              	13.86%
Bootstrap support for H2ZW17 as seed ortholog is 77%.
Bootstrap support for A3LWZ7 as seed ortholog is 92%.

Group of orthologs #1169. Best score 157 bits
Score difference with first non-orthologous sequence - L.chalumnae:157 S.stipitis:157

M3XK17              	100.00%		A3LS34              	100.00%
H3A264              	17.39%		
Bootstrap support for M3XK17 as seed ortholog is 100%.
Bootstrap support for A3LS34 as seed ortholog is 100%.

Group of orthologs #1170. Best score 157 bits
Score difference with first non-orthologous sequence - L.chalumnae:157 S.stipitis:157

H3ABX2              	100.00%		A3LRT7              	100.00%
Bootstrap support for H3ABX2 as seed ortholog is 100%.
Bootstrap support for A3LRT7 as seed ortholog is 100%.

Group of orthologs #1171. Best score 157 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 S.stipitis:73

H3AF98              	100.00%		A3LRA1              	100.00%
Bootstrap support for H3AF98 as seed ortholog is 97%.
Bootstrap support for A3LRA1 as seed ortholog is 96%.

Group of orthologs #1172. Best score 157 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 S.stipitis:157

H3B057              	100.00%		A3GH99              	100.00%
Bootstrap support for H3B057 as seed ortholog is 99%.
Bootstrap support for A3GH99 as seed ortholog is 100%.

Group of orthologs #1173. Best score 157 bits
Score difference with first non-orthologous sequence - L.chalumnae:157 S.stipitis:157

H3B8R7              	100.00%		A3GF11              	100.00%
Bootstrap support for H3B8R7 as seed ortholog is 100%.
Bootstrap support for A3GF11 as seed ortholog is 100%.

Group of orthologs #1174. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 S.stipitis:156

H3AJM5              	100.00%		A3GHG8              	100.00%
H3AFY6              	33.33%		
Bootstrap support for H3AJM5 as seed ortholog is 97%.
Bootstrap support for A3GHG8 as seed ortholog is 100%.

Group of orthologs #1175. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:32 S.stipitis:156

H2ZZK8              	100.00%		A3LXU5              	100.00%
Bootstrap support for H2ZZK8 as seed ortholog is 78%.
Bootstrap support for A3LXU5 as seed ortholog is 100%.

Group of orthologs #1176. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 S.stipitis:156

H3A7T4              	100.00%		A3LZW2              	100.00%
Bootstrap support for H3A7T4 as seed ortholog is 99%.
Bootstrap support for A3LZW2 as seed ortholog is 100%.

Group of orthologs #1177. Best score 156 bits
Score difference with first non-orthologous sequence - L.chalumnae:156 S.stipitis:156

H3ATQ3              	100.00%		A3LQJ0              	100.00%
Bootstrap support for H3ATQ3 as seed ortholog is 100%.
Bootstrap support for A3LQJ0 as seed ortholog is 100%.

Group of orthologs #1178. Best score 155 bits
Score difference with first non-orthologous sequence - L.chalumnae:155 S.stipitis:155

H3APW1              	100.00%		A3LYQ8              	100.00%
H2ZW84              	6.38%		
Bootstrap support for H3APW1 as seed ortholog is 100%.
Bootstrap support for A3LYQ8 as seed ortholog is 100%.

Group of orthologs #1179. Best score 155 bits
Score difference with first non-orthologous sequence - L.chalumnae:155 S.stipitis:155

H3A1M6              	100.00%		A3LNJ3              	100.00%
Bootstrap support for H3A1M6 as seed ortholog is 100%.
Bootstrap support for A3LNJ3 as seed ortholog is 100%.

Group of orthologs #1180. Best score 155 bits
Score difference with first non-orthologous sequence - L.chalumnae:155 S.stipitis:105

H3A2I6              	100.00%		A3LZK6              	100.00%
Bootstrap support for H3A2I6 as seed ortholog is 100%.
Bootstrap support for A3LZK6 as seed ortholog is 99%.

Group of orthologs #1181. Best score 155 bits
Score difference with first non-orthologous sequence - L.chalumnae:155 S.stipitis:155

H3B6I8              	100.00%		A3LQ02              	100.00%
Bootstrap support for H3B6I8 as seed ortholog is 100%.
Bootstrap support for A3LQ02 as seed ortholog is 100%.

Group of orthologs #1182. Best score 155 bits
Score difference with first non-orthologous sequence - L.chalumnae:155 S.stipitis:155

H3B9D0              	100.00%		A3LQF1              	100.00%
Bootstrap support for H3B9D0 as seed ortholog is 100%.
Bootstrap support for A3LQF1 as seed ortholog is 100%.

Group of orthologs #1183. Best score 154 bits
Score difference with first non-orthologous sequence - L.chalumnae:17 S.stipitis:154

M3XH38              	100.00%		A3LUT3              	100.00%
Bootstrap support for M3XH38 as seed ortholog is 62%.
Alternative seed ortholog is H3A8M8 (17 bits away from this cluster)
Bootstrap support for A3LUT3 as seed ortholog is 100%.

Group of orthologs #1184. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:153 S.stipitis:153

H3A9J9              	100.00%		A3LVT6              	100.00%
H3ABR6              	30.72%		
H3A2D5              	27.13%		
H3A5M5              	21.90%		
Bootstrap support for H3A9J9 as seed ortholog is 100%.
Bootstrap support for A3LVT6 as seed ortholog is 100%.

Group of orthologs #1185. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 S.stipitis:153

H3AE10              	100.00%		A3LRC5              	100.00%
H3AB23              	11.83%		
Bootstrap support for H3AE10 as seed ortholog is 99%.
Bootstrap support for A3LRC5 as seed ortholog is 100%.

Group of orthologs #1186. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:153 S.stipitis:153

H2ZSR4              	100.00%		A3LRA0              	100.00%
Bootstrap support for H2ZSR4 as seed ortholog is 100%.
Bootstrap support for A3LRA0 as seed ortholog is 100%.

Group of orthologs #1187. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 S.stipitis:153

H3AF95              	100.00%		A3M0F3              	100.00%
Bootstrap support for H3AF95 as seed ortholog is 95%.
Bootstrap support for A3M0F3 as seed ortholog is 100%.

Group of orthologs #1188. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:6 S.stipitis:153

H3B5X8              	100.00%		A3LP86              	100.00%
Bootstrap support for H3B5X8 as seed ortholog is 56%.
Alternative seed ortholog is H3AB13 (6 bits away from this cluster)
Bootstrap support for A3LP86 as seed ortholog is 100%.

Group of orthologs #1189. Best score 153 bits
Score difference with first non-orthologous sequence - L.chalumnae:153 S.stipitis:153

H3BG00              	100.00%		A3LN86              	100.00%
Bootstrap support for H3BG00 as seed ortholog is 100%.
Bootstrap support for A3LN86 as seed ortholog is 100%.

Group of orthologs #1190. Best score 152 bits
Score difference with first non-orthologous sequence - L.chalumnae:152 S.stipitis:152

H2ZTB8              	100.00%		A3GFA1              	100.00%
                    	       		A3GH12              	16.74%
Bootstrap support for H2ZTB8 as seed ortholog is 100%.
Bootstrap support for A3GFA1 as seed ortholog is 100%.

Group of orthologs #1191. Best score 152 bits
Score difference with first non-orthologous sequence - L.chalumnae:152 S.stipitis:152

H3AJ60              	100.00%		A3LYZ7              	100.00%
Bootstrap support for H3AJ60 as seed ortholog is 100%.
Bootstrap support for A3LYZ7 as seed ortholog is 100%.

Group of orthologs #1192. Best score 152 bits
Score difference with first non-orthologous sequence - L.chalumnae:152 S.stipitis:152

H3BI06              	100.00%		A3GGL0              	100.00%
Bootstrap support for H3BI06 as seed ortholog is 100%.
Bootstrap support for A3GGL0 as seed ortholog is 100%.

Group of orthologs #1193. Best score 152 bits
Score difference with first non-orthologous sequence - L.chalumnae:152 S.stipitis:152

H3B4S8              	100.00%		A3LZC9              	100.00%
Bootstrap support for H3B4S8 as seed ortholog is 100%.
Bootstrap support for A3LZC9 as seed ortholog is 100%.

Group of orthologs #1194. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 S.stipitis:151

H3AHW9              	100.00%		A3GHP8              	100.00%
H3A981              	100.00%		A3GHE5              	100.00%
H3AEZ9              	62.52%		A3LTS7              	14.97%
H3APS3              	38.14%		A3LSW3              	12.36%
H3ATR4              	36.61%		
H3AUZ7              	36.00%		
H3B3X6              	35.74%		
H3A009              	35.08%		
H3A9F1              	34.75%		
H3ALS9              	32.35%		
H3A827              	30.71%		
H3A3I2              	14.06%		
H2ZXM3              	13.66%		
Bootstrap support for H3AHW9 as seed ortholog is 100%.
Bootstrap support for H3A981 as seed ortholog is 100%.
Bootstrap support for A3GHP8 as seed ortholog is 100%.
Bootstrap support for A3GHE5 as seed ortholog is 100%.

Group of orthologs #1195. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 S.stipitis:151

H3AV13              	100.00%		A3GG02              	100.00%
H2ZW63              	67.45%		
H3BE56              	61.32%		
Bootstrap support for H3AV13 as seed ortholog is 95%.
Bootstrap support for A3GG02 as seed ortholog is 100%.

Group of orthologs #1196. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 S.stipitis:151

H3AN22              	100.00%		A3LY46              	100.00%
                    	       		A3LTQ3              	31.43%
                    	       		A3GH40              	8.98%
Bootstrap support for H3AN22 as seed ortholog is 100%.
Bootstrap support for A3LY46 as seed ortholog is 100%.

Group of orthologs #1197. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 S.stipitis:151

M3XHU7              	100.00%		P34736              	100.00%
H3AYY5              	48.58%		A3GIF0              	29.02%
Bootstrap support for M3XHU7 as seed ortholog is 100%.
Bootstrap support for P34736 as seed ortholog is 100%.

Group of orthologs #1198. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 S.stipitis:151

H3B884              	100.00%		A3LPP9              	100.00%
H3AJD1              	32.61%		
Bootstrap support for H3B884 as seed ortholog is 100%.
Bootstrap support for A3LPP9 as seed ortholog is 100%.

Group of orthologs #1199. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 S.stipitis:151

H3A2N8              	100.00%		A3LTI1              	100.00%
Bootstrap support for H3A2N8 as seed ortholog is 100%.
Bootstrap support for A3LTI1 as seed ortholog is 100%.

Group of orthologs #1200. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 S.stipitis:151

H3AAC1              	100.00%		A3LQ26              	100.00%
Bootstrap support for H3AAC1 as seed ortholog is 98%.
Bootstrap support for A3LQ26 as seed ortholog is 100%.

Group of orthologs #1201. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 S.stipitis:151

H3AE06              	100.00%		A3LPY3              	100.00%
Bootstrap support for H3AE06 as seed ortholog is 100%.
Bootstrap support for A3LPY3 as seed ortholog is 100%.

Group of orthologs #1202. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 S.stipitis:151

H3B6B1              	100.00%		A3GFT6              	100.00%
Bootstrap support for H3B6B1 as seed ortholog is 100%.
Bootstrap support for A3GFT6 as seed ortholog is 100%.

Group of orthologs #1203. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:27 S.stipitis:151

H3B157              	100.00%		A3LRK3              	100.00%
Bootstrap support for H3B157 as seed ortholog is 87%.
Bootstrap support for A3LRK3 as seed ortholog is 100%.

Group of orthologs #1204. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 S.stipitis:151

H3AZ72              	100.00%		A3LXS6              	100.00%
Bootstrap support for H3AZ72 as seed ortholog is 100%.
Bootstrap support for A3LXS6 as seed ortholog is 100%.

Group of orthologs #1205. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 S.stipitis:151

H3BFD4              	100.00%		A3GIA8              	100.00%
Bootstrap support for H3BFD4 as seed ortholog is 100%.
Bootstrap support for A3GIA8 as seed ortholog is 100%.

Group of orthologs #1206. Best score 151 bits
Score difference with first non-orthologous sequence - L.chalumnae:151 S.stipitis:151

H3BIP8              	100.00%		A3GHN0              	100.00%
Bootstrap support for H3BIP8 as seed ortholog is 100%.
Bootstrap support for A3GHN0 as seed ortholog is 100%.

Group of orthologs #1207. Best score 150 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 S.stipitis:150

H2ZT96              	100.00%		A3GGU2              	100.00%
Bootstrap support for H2ZT96 as seed ortholog is 99%.
Bootstrap support for A3GGU2 as seed ortholog is 100%.

Group of orthologs #1208. Best score 149 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 S.stipitis:149

H3A836              	100.00%		O13393              	100.00%
H2ZV61              	51.43%		
Bootstrap support for H3A836 as seed ortholog is 100%.
Bootstrap support for O13393 as seed ortholog is 100%.

Group of orthologs #1209. Best score 149 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 S.stipitis:149

H3A4C1              	100.00%		A3LXP9              	100.00%
Bootstrap support for H3A4C1 as seed ortholog is 100%.
Bootstrap support for A3LXP9 as seed ortholog is 100%.

Group of orthologs #1210. Best score 149 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 S.stipitis:149

H3A7F4              	100.00%		A3LW68              	100.00%
Bootstrap support for H3A7F4 as seed ortholog is 100%.
Bootstrap support for A3LW68 as seed ortholog is 100%.

Group of orthologs #1211. Best score 149 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 S.stipitis:149

H3A519              	100.00%		A3LZ30              	100.00%
Bootstrap support for H3A519 as seed ortholog is 100%.
Bootstrap support for A3LZ30 as seed ortholog is 100%.

Group of orthologs #1212. Best score 149 bits
Score difference with first non-orthologous sequence - L.chalumnae:149 S.stipitis:149

H3B312              	100.00%		A3LW95              	100.00%
Bootstrap support for H3B312 as seed ortholog is 100%.
Bootstrap support for A3LW95 as seed ortholog is 100%.

Group of orthologs #1213. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 S.stipitis:69

H3AI22              	100.00%		A3LY37              	100.00%
H3AB76              	82.08%		
M3XGK5              	9.83%		
H3B8F7              	7.80%		
Bootstrap support for H3AI22 as seed ortholog is 98%.
Bootstrap support for A3LY37 as seed ortholog is 97%.

Group of orthologs #1214. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 S.stipitis:34

H3B626              	100.00%		A3GGP3              	100.00%
H3B5G2              	62.90%		A3LRD4              	14.12%
H3A3S4              	15.50%		
Bootstrap support for H3B626 as seed ortholog is 100%.
Bootstrap support for A3GGP3 as seed ortholog is 77%.

Group of orthologs #1215. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 S.stipitis:148

H3A8Y7              	100.00%		A3LYT8              	100.00%
H3BDI8              	40.70%		
H3AMT3              	37.36%		
Bootstrap support for H3A8Y7 as seed ortholog is 100%.
Bootstrap support for A3LYT8 as seed ortholog is 100%.

Group of orthologs #1216. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 S.stipitis:148

H3AWQ3              	100.00%		A3LVS5              	100.00%
Bootstrap support for H3AWQ3 as seed ortholog is 97%.
Bootstrap support for A3LVS5 as seed ortholog is 100%.

Group of orthologs #1217. Best score 148 bits
Score difference with first non-orthologous sequence - L.chalumnae:148 S.stipitis:148

H3BCA1              	100.00%		A3M070              	100.00%
Bootstrap support for H3BCA1 as seed ortholog is 100%.
Bootstrap support for A3M070 as seed ortholog is 100%.

Group of orthologs #1218. Best score 147 bits
Score difference with first non-orthologous sequence - L.chalumnae:147 S.stipitis:147

H3AJJ9              	100.00%		A3LXF4              	100.00%
H3BCN0              	65.91%		
H3B2E3              	26.08%		
Bootstrap support for H3AJJ9 as seed ortholog is 100%.
Bootstrap support for A3LXF4 as seed ortholog is 100%.

Group of orthologs #1219. Best score 147 bits
Score difference with first non-orthologous sequence - L.chalumnae:147 S.stipitis:147

H3B814              	100.00%		A3GHC2              	100.00%
Bootstrap support for H3B814 as seed ortholog is 100%.
Bootstrap support for A3GHC2 as seed ortholog is 100%.

Group of orthologs #1220. Best score 147 bits
Score difference with first non-orthologous sequence - L.chalumnae:147 S.stipitis:147

H3B9J9              	100.00%		A3LY15              	100.00%
Bootstrap support for H3B9J9 as seed ortholog is 100%.
Bootstrap support for A3LY15 as seed ortholog is 100%.

Group of orthologs #1221. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 S.stipitis:146

H3AVF2              	100.00%		A3LVT0              	100.00%
H3AV94              	33.72%		
Bootstrap support for H3AVF2 as seed ortholog is 100%.
Bootstrap support for A3LVT0 as seed ortholog is 100%.

Group of orthologs #1222. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 S.stipitis:146

H2ZWY8              	100.00%		A3LW23              	100.00%
Bootstrap support for H2ZWY8 as seed ortholog is 97%.
Bootstrap support for A3LW23 as seed ortholog is 100%.

Group of orthologs #1223. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 S.stipitis:146

H3AEI5              	100.00%		A3GGT1              	100.00%
Bootstrap support for H3AEI5 as seed ortholog is 100%.
Bootstrap support for A3GGT1 as seed ortholog is 100%.

Group of orthologs #1224. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 S.stipitis:146

H3AR96              	100.00%		A3GHG7              	100.00%
Bootstrap support for H3AR96 as seed ortholog is 95%.
Bootstrap support for A3GHG7 as seed ortholog is 100%.

Group of orthologs #1225. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 S.stipitis:146

H3BFH2              	100.00%		A3LQW0              	100.00%
Bootstrap support for H3BFH2 as seed ortholog is 100%.
Bootstrap support for A3LQW0 as seed ortholog is 100%.

Group of orthologs #1226. Best score 146 bits
Score difference with first non-orthologous sequence - L.chalumnae:146 S.stipitis:146

H3BHU1              	100.00%		A3LR91              	100.00%
Bootstrap support for H3BHU1 as seed ortholog is 100%.
Bootstrap support for A3LR91 as seed ortholog is 100%.

Group of orthologs #1227. Best score 145 bits
Score difference with first non-orthologous sequence - L.chalumnae:145 S.stipitis:145

H3AQF2              	100.00%		A3LWI2              	100.00%
H3ADH0              	48.07%		
Bootstrap support for H3AQF2 as seed ortholog is 100%.
Bootstrap support for A3LWI2 as seed ortholog is 100%.

Group of orthologs #1228. Best score 145 bits
Score difference with first non-orthologous sequence - L.chalumnae:145 S.stipitis:145

H3AFY8              	100.00%		A3LXF6              	100.00%
Bootstrap support for H3AFY8 as seed ortholog is 100%.
Bootstrap support for A3LXF6 as seed ortholog is 100%.

Group of orthologs #1229. Best score 145 bits
Score difference with first non-orthologous sequence - L.chalumnae:145 S.stipitis:145

H3B3L5              	100.00%		A3GEV2              	100.00%
Bootstrap support for H3B3L5 as seed ortholog is 100%.
Bootstrap support for A3GEV2 as seed ortholog is 100%.

Group of orthologs #1230. Best score 145 bits
Score difference with first non-orthologous sequence - L.chalumnae:145 S.stipitis:145

H3AW58              	100.00%		A3LU25              	100.00%
Bootstrap support for H3AW58 as seed ortholog is 100%.
Bootstrap support for A3LU25 as seed ortholog is 100%.

Group of orthologs #1231. Best score 145 bits
Score difference with first non-orthologous sequence - L.chalumnae:145 S.stipitis:145

H3B8I2              	100.00%		A3GH04              	100.00%
Bootstrap support for H3B8I2 as seed ortholog is 100%.
Bootstrap support for A3GH04 as seed ortholog is 100%.

Group of orthologs #1232. Best score 145 bits
Score difference with first non-orthologous sequence - L.chalumnae:145 S.stipitis:145

M3XJ77              	100.00%		A3LUZ3              	100.00%
Bootstrap support for M3XJ77 as seed ortholog is 100%.
Bootstrap support for A3LUZ3 as seed ortholog is 100%.

Group of orthologs #1233. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 S.stipitis:19

H3AL49              	100.00%		A3LTB1              	100.00%
H3A818              	48.78%		A3LN92              	24.52%
H3B1W9              	25.87%		
H2ZUI9              	23.97%		
Bootstrap support for H3AL49 as seed ortholog is 81%.
Bootstrap support for A3LTB1 as seed ortholog is 83%.

Group of orthologs #1234. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 S.stipitis:144

H3A6P7              	100.00%		A3LVY5              	100.00%
H3A3S6              	68.57%		A3LNA9              	15.96%
H3AUM1              	32.04%		
Bootstrap support for H3A6P7 as seed ortholog is 100%.
Bootstrap support for A3LVY5 as seed ortholog is 100%.

Group of orthologs #1235. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 S.stipitis:144

M3XHK2              	100.00%		A3LUW6              	100.00%
H3A224              	37.84%		A3LWU8              	9.87%
H3A7F7              	19.51%		
Bootstrap support for M3XHK2 as seed ortholog is 100%.
Bootstrap support for A3LUW6 as seed ortholog is 100%.

Group of orthologs #1236. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 S.stipitis:144

H2ZWX7              	100.00%		A3GFL9              	100.00%
H3B840              	42.28%		
H3AGS7              	40.38%		
Bootstrap support for H2ZWX7 as seed ortholog is 100%.
Bootstrap support for A3GFL9 as seed ortholog is 100%.

Group of orthologs #1237. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:73 S.stipitis:144

H2ZWG7              	100.00%		A3LY58              	100.00%
H3BAU8              	31.11%		
H3AZC8              	17.48%		
Bootstrap support for H2ZWG7 as seed ortholog is 99%.
Bootstrap support for A3LY58 as seed ortholog is 100%.

Group of orthologs #1238. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 S.stipitis:144

M3XK92              	100.00%		A3LS60              	100.00%
M3XK49              	68.40%		
Bootstrap support for M3XK92 as seed ortholog is 100%.
Bootstrap support for A3LS60 as seed ortholog is 100%.

Group of orthologs #1239. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 S.stipitis:144

H3AUI9              	100.00%		A3LMR8              	100.00%
Bootstrap support for H3AUI9 as seed ortholog is 100%.
Bootstrap support for A3LMR8 as seed ortholog is 100%.

Group of orthologs #1240. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 S.stipitis:144

H3AWQ0              	100.00%		A3LNE4              	100.00%
Bootstrap support for H3AWQ0 as seed ortholog is 100%.
Bootstrap support for A3LNE4 as seed ortholog is 100%.

Group of orthologs #1241. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 S.stipitis:144

H3ASE1              	100.00%		A3LWT3              	100.00%
Bootstrap support for H3ASE1 as seed ortholog is 100%.
Bootstrap support for A3LWT3 as seed ortholog is 100%.

Group of orthologs #1242. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 S.stipitis:144

H3B2N8              	100.00%		A3LN95              	100.00%
Bootstrap support for H3B2N8 as seed ortholog is 100%.
Bootstrap support for A3LN95 as seed ortholog is 100%.

Group of orthologs #1243. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 S.stipitis:144

H3BG24              	100.00%		A3LP06              	100.00%
Bootstrap support for H3BG24 as seed ortholog is 100%.
Bootstrap support for A3LP06 as seed ortholog is 100%.

Group of orthologs #1244. Best score 144 bits
Score difference with first non-orthologous sequence - L.chalumnae:144 S.stipitis:144

M3XGK0              	100.00%		A3LMZ3              	100.00%
Bootstrap support for M3XGK0 as seed ortholog is 100%.
Bootstrap support for A3LMZ3 as seed ortholog is 100%.

Group of orthologs #1245. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:41 S.stipitis:143

H3B8P8              	100.00%		A3LZ13              	100.00%
H3A457              	7.48%		
H3A843              	6.63%		
H3A5K2              	6.46%		
H3B524              	5.61%		
H2ZX90              	5.44%		
H3BGD7              	5.10%		
Bootstrap support for H3B8P8 as seed ortholog is 84%.
Bootstrap support for A3LZ13 as seed ortholog is 100%.

Group of orthologs #1246. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 S.stipitis:143

M3XGT8              	100.00%		A3LRG0              	100.00%
H3ARK1              	57.75%		
H2ZW44              	51.32%		
H3AQ78              	42.84%		
Bootstrap support for M3XGT8 as seed ortholog is 92%.
Bootstrap support for A3LRG0 as seed ortholog is 100%.

Group of orthologs #1247. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 S.stipitis:143

H3ATC3              	100.00%		A3LVD2              	100.00%
H3B980              	40.62%		
Bootstrap support for H3ATC3 as seed ortholog is 96%.
Bootstrap support for A3LVD2 as seed ortholog is 100%.

Group of orthologs #1248. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:12 S.stipitis:143

H3A3U4              	100.00%		A3GFU8              	100.00%
Bootstrap support for H3A3U4 as seed ortholog is 76%.
Bootstrap support for A3GFU8 as seed ortholog is 100%.

Group of orthologs #1249. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:143 S.stipitis:143

H3A242              	100.00%		A3GHQ3              	100.00%
Bootstrap support for H3A242 as seed ortholog is 100%.
Bootstrap support for A3GHQ3 as seed ortholog is 100%.

Group of orthologs #1250. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:143 S.stipitis:143

H3ABA0              	100.00%		A3GI98              	100.00%
Bootstrap support for H3ABA0 as seed ortholog is 100%.
Bootstrap support for A3GI98 as seed ortholog is 100%.

Group of orthologs #1251. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:143 S.stipitis:143

H3AJI9              	100.00%		A3LZH4              	100.00%
Bootstrap support for H3AJI9 as seed ortholog is 100%.
Bootstrap support for A3LZH4 as seed ortholog is 100%.

Group of orthologs #1252. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:143 S.stipitis:143

H3B3K0              	100.00%		A3LUD2              	100.00%
Bootstrap support for H3B3K0 as seed ortholog is 100%.
Bootstrap support for A3LUD2 as seed ortholog is 100%.

Group of orthologs #1253. Best score 143 bits
Score difference with first non-orthologous sequence - L.chalumnae:143 S.stipitis:143

H3BDW3              	100.00%		A3LW77              	100.00%
Bootstrap support for H3BDW3 as seed ortholog is 100%.
Bootstrap support for A3LW77 as seed ortholog is 100%.

Group of orthologs #1254. Best score 142 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 S.stipitis:142

H3BAH1              	100.00%		A3LVV6              	100.00%
H3B393              	31.94%		
Bootstrap support for H3BAH1 as seed ortholog is 92%.
Bootstrap support for A3LVV6 as seed ortholog is 100%.

Group of orthologs #1255. Best score 142 bits
Score difference with first non-orthologous sequence - L.chalumnae:142 S.stipitis:142

H3ATE3              	100.00%		A3GHM1              	100.00%
Bootstrap support for H3ATE3 as seed ortholog is 100%.
Bootstrap support for A3GHM1 as seed ortholog is 100%.

Group of orthologs #1256. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:141 S.stipitis:141

H2ZUE9              	100.00%		A3GG87              	100.00%
Bootstrap support for H2ZUE9 as seed ortholog is 100%.
Bootstrap support for A3GG87 as seed ortholog is 100%.

Group of orthologs #1257. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:141 S.stipitis:141

H2ZXQ5              	100.00%		A3LQL1              	100.00%
Bootstrap support for H2ZXQ5 as seed ortholog is 100%.
Bootstrap support for A3LQL1 as seed ortholog is 100%.

Group of orthologs #1258. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:141 S.stipitis:141

H2ZRK8              	100.00%		A3M0I4              	100.00%
Bootstrap support for H2ZRK8 as seed ortholog is 100%.
Bootstrap support for A3M0I4 as seed ortholog is 100%.

Group of orthologs #1259. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:43 S.stipitis:141

H2ZUA3              	100.00%		A3M0J0              	100.00%
Bootstrap support for H2ZUA3 as seed ortholog is 98%.
Bootstrap support for A3M0J0 as seed ortholog is 100%.

Group of orthologs #1260. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:141 S.stipitis:141

H2ZY81              	100.00%		A3LZD3              	100.00%
Bootstrap support for H2ZY81 as seed ortholog is 100%.
Bootstrap support for A3LZD3 as seed ortholog is 100%.

Group of orthologs #1261. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:141 S.stipitis:141

H3ASN9              	100.00%		A3LN15              	100.00%
Bootstrap support for H3ASN9 as seed ortholog is 100%.
Bootstrap support for A3LN15 as seed ortholog is 100%.

Group of orthologs #1262. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:26 S.stipitis:14

H3AVS6              	100.00%		A3LU83              	100.00%
Bootstrap support for H3AVS6 as seed ortholog is 47%.
Alternative seed ortholog is H3AFV8 (26 bits away from this cluster)
Bootstrap support for A3LU83 as seed ortholog is 70%.
Alternative seed ortholog is A3LN81 (14 bits away from this cluster)

Group of orthologs #1263. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:141 S.stipitis:141

H3B886              	100.00%		A3LUV2              	100.00%
Bootstrap support for H3B886 as seed ortholog is 100%.
Bootstrap support for A3LUV2 as seed ortholog is 100%.

Group of orthologs #1264. Best score 141 bits
Score difference with first non-orthologous sequence - L.chalumnae:141 S.stipitis:141

M3XHQ1              	100.00%		A3GH43              	100.00%
Bootstrap support for M3XHQ1 as seed ortholog is 100%.
Bootstrap support for A3GH43 as seed ortholog is 100%.

Group of orthologs #1265. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 S.stipitis:140

H3AG26              	100.00%		A3LR81              	100.00%
H3A097              	96.64%		
H3BG90              	89.26%		
Bootstrap support for H3AG26 as seed ortholog is 100%.
Bootstrap support for A3LR81 as seed ortholog is 100%.

Group of orthologs #1266. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 S.stipitis:140

H3AEH4              	100.00%		A3LX65              	100.00%
H2ZWF4              	77.34%		
Bootstrap support for H3AEH4 as seed ortholog is 99%.
Bootstrap support for A3LX65 as seed ortholog is 100%.

Group of orthologs #1267. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 S.stipitis:140

H3BEJ8              	100.00%		A3GI69              	100.00%
H3AZS8              	14.37%		
Bootstrap support for H3BEJ8 as seed ortholog is 99%.
Bootstrap support for A3GI69 as seed ortholog is 100%.

Group of orthologs #1268. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 S.stipitis:140

H2ZTI6              	100.00%		A3LVD5              	100.00%
Bootstrap support for H2ZTI6 as seed ortholog is 100%.
Bootstrap support for A3LVD5 as seed ortholog is 100%.

Group of orthologs #1269. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 S.stipitis:140

H3A449              	100.00%		A3LVF6              	100.00%
Bootstrap support for H3A449 as seed ortholog is 100%.
Bootstrap support for A3LVF6 as seed ortholog is 100%.

Group of orthologs #1270. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 S.stipitis:140

H3A5C2              	100.00%		A3LXS7              	100.00%
Bootstrap support for H3A5C2 as seed ortholog is 100%.
Bootstrap support for A3LXS7 as seed ortholog is 100%.

Group of orthologs #1271. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 S.stipitis:140

H3A535              	100.00%		A3LZI6              	100.00%
Bootstrap support for H3A535 as seed ortholog is 100%.
Bootstrap support for A3LZI6 as seed ortholog is 100%.

Group of orthologs #1272. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 S.stipitis:140

H3B0N0              	100.00%		A3LUJ7              	100.00%
Bootstrap support for H3B0N0 as seed ortholog is 100%.
Bootstrap support for A3LUJ7 as seed ortholog is 100%.

Group of orthologs #1273. Best score 140 bits
Score difference with first non-orthologous sequence - L.chalumnae:140 S.stipitis:140

H3B9Z7              	100.00%		A3M090              	100.00%
Bootstrap support for H3B9Z7 as seed ortholog is 100%.
Bootstrap support for A3M090 as seed ortholog is 100%.

Group of orthologs #1274. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 S.stipitis:139

H3A8N3              	100.00%		A3LX45              	100.00%
H3A6G0              	61.06%		
H3AHT6              	57.43%		
Bootstrap support for H3A8N3 as seed ortholog is 100%.
Bootstrap support for A3LX45 as seed ortholog is 100%.

Group of orthologs #1275. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 S.stipitis:139

H3AKS5              	100.00%		A3LWD7              	100.00%
H3AHV2              	26.54%		
Bootstrap support for H3AKS5 as seed ortholog is 100%.
Bootstrap support for A3LWD7 as seed ortholog is 100%.

Group of orthologs #1276. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 S.stipitis:139

H3A604              	100.00%		A3GIA5              	100.00%
Bootstrap support for H3A604 as seed ortholog is 98%.
Bootstrap support for A3GIA5 as seed ortholog is 100%.

Group of orthologs #1277. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:8 S.stipitis:139

H3ALF6              	100.00%		A3GHM5              	100.00%
Bootstrap support for H3ALF6 as seed ortholog is 63%.
Alternative seed ortholog is H3AKU5 (8 bits away from this cluster)
Bootstrap support for A3GHM5 as seed ortholog is 100%.

Group of orthologs #1278. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 S.stipitis:139

H3B9G9              	100.00%		A3GGJ1              	100.00%
Bootstrap support for H3B9G9 as seed ortholog is 100%.
Bootstrap support for A3GGJ1 as seed ortholog is 100%.

Group of orthologs #1279. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 S.stipitis:84

H3B6P2              	100.00%		A3LQ86              	100.00%
Bootstrap support for H3B6P2 as seed ortholog is 90%.
Bootstrap support for A3LQ86 as seed ortholog is 99%.

Group of orthologs #1280. Best score 139 bits
Score difference with first non-orthologous sequence - L.chalumnae:139 S.stipitis:139

H3B7I5              	100.00%		A3LQ97              	100.00%
Bootstrap support for H3B7I5 as seed ortholog is 100%.
Bootstrap support for A3LQ97 as seed ortholog is 100%.

Group of orthologs #1281. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 S.stipitis:3

H3ASG5              	100.00%		A3LNK1              	100.00%
H3B7E7              	100.00%		A3LVN1              	12.70%
H3B2B3              	56.56%		
H2ZXF2              	37.90%		
H3APZ9              	19.58%		
H3BFD6              	12.21%		
H3AAF1              	11.56%		
H3BGN6              	10.98%		
H3AZI0              	7.66%		
Bootstrap support for H3ASG5 as seed ortholog is 100%.
Bootstrap support for H3B7E7 as seed ortholog is 100%.
Bootstrap support for A3LNK1 as seed ortholog is 48%.
Alternative seed ortholog is A3LUH2 (3 bits away from this cluster)

Group of orthologs #1282. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 S.stipitis:138

H3BG52              	100.00%		A3GHY4              	100.00%
H3BAU6              	35.02%		
Bootstrap support for H3BG52 as seed ortholog is 100%.
Bootstrap support for A3GHY4 as seed ortholog is 100%.

Group of orthologs #1283. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 S.stipitis:138

H3BFM6              	100.00%		A3LUU7              	100.00%
                    	       		A3LQJ4              	9.96%
Bootstrap support for H3BFM6 as seed ortholog is 100%.
Bootstrap support for A3LUU7 as seed ortholog is 100%.

Group of orthologs #1284. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 S.stipitis:138

H3AEB3              	100.00%		A3M053              	100.00%
Bootstrap support for H3AEB3 as seed ortholog is 100%.
Bootstrap support for A3M053 as seed ortholog is 100%.

Group of orthologs #1285. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:14 S.stipitis:138

H3AYU6              	100.00%		A3LPF1              	100.00%
Bootstrap support for H3AYU6 as seed ortholog is 75%.
Bootstrap support for A3LPF1 as seed ortholog is 100%.

Group of orthologs #1286. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 S.stipitis:138

H3B0P6              	100.00%		A3LN29              	100.00%
Bootstrap support for H3B0P6 as seed ortholog is 100%.
Bootstrap support for A3LN29 as seed ortholog is 100%.

Group of orthologs #1287. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 S.stipitis:138

H3AQ13              	100.00%		A3LXG0              	100.00%
Bootstrap support for H3AQ13 as seed ortholog is 100%.
Bootstrap support for A3LXG0 as seed ortholog is 100%.

Group of orthologs #1288. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 S.stipitis:138

H3B0S0              	100.00%		A3LTT4              	100.00%
Bootstrap support for H3B0S0 as seed ortholog is 100%.
Bootstrap support for A3LTT4 as seed ortholog is 100%.

Group of orthologs #1289. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 S.stipitis:138

H3B183              	100.00%		A3LZU1              	100.00%
Bootstrap support for H3B183 as seed ortholog is 100%.
Bootstrap support for A3LZU1 as seed ortholog is 100%.

Group of orthologs #1290. Best score 138 bits
Score difference with first non-orthologous sequence - L.chalumnae:138 S.stipitis:138

M3XGW8              	100.00%		A3GHB5              	100.00%
Bootstrap support for M3XGW8 as seed ortholog is 100%.
Bootstrap support for A3GHB5 as seed ortholog is 100%.

Group of orthologs #1291. Best score 137 bits
Score difference with first non-orthologous sequence - L.chalumnae:36 S.stipitis:16

H3B9P8              	100.00%		A3LS16              	100.00%
H2ZU71              	19.60%		A3LWD6              	18.22%
H3AW06              	17.80%		A3LWD5              	17.90%
H3ADG2              	16.25%		A3GFF7              	16.00%
Bootstrap support for H3B9P8 as seed ortholog is 74%.
Alternative seed ortholog is H3AN83 (36 bits away from this cluster)
Bootstrap support for A3LS16 as seed ortholog is 79%.

Group of orthologs #1292. Best score 137 bits
Score difference with first non-orthologous sequence - L.chalumnae:137 S.stipitis:137

H3A723              	100.00%		A3LTW7              	100.00%
H3A0R8              	48.97%		
H3AFS1              	7.38%		
Bootstrap support for H3A723 as seed ortholog is 100%.
Bootstrap support for A3LTW7 as seed ortholog is 100%.

Group of orthologs #1293. Best score 137 bits
Score difference with first non-orthologous sequence - L.chalumnae:137 S.stipitis:137

H2ZYC1              	100.00%		A3GF04              	100.00%
H3B821              	34.24%		
Bootstrap support for H2ZYC1 as seed ortholog is 100%.
Bootstrap support for A3GF04 as seed ortholog is 100%.

Group of orthologs #1294. Best score 137 bits
Score difference with first non-orthologous sequence - L.chalumnae:36 S.stipitis:87

H3A3L7              	100.00%		A3LSA8              	100.00%
H3BDI2              	57.21%		
Bootstrap support for H3A3L7 as seed ortholog is 79%.
Bootstrap support for A3LSA8 as seed ortholog is 95%.

Group of orthologs #1295. Best score 137 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 S.stipitis:63

H3AC21              	100.00%		A3M0K2              	100.00%
H3BB40              	32.65%		
Bootstrap support for H3AC21 as seed ortholog is 99%.
Bootstrap support for A3M0K2 as seed ortholog is 95%.

Group of orthologs #1296. Best score 137 bits
Score difference with first non-orthologous sequence - L.chalumnae:137 S.stipitis:94

H2ZTK0              	100.00%		A3M0M8              	100.00%
Bootstrap support for H2ZTK0 as seed ortholog is 100%.
Bootstrap support for A3M0M8 as seed ortholog is 100%.

Group of orthologs #1297. Best score 137 bits
Score difference with first non-orthologous sequence - L.chalumnae:137 S.stipitis:137

H3A6K0              	100.00%		A3LQB4              	100.00%
Bootstrap support for H3A6K0 as seed ortholog is 100%.
Bootstrap support for A3LQB4 as seed ortholog is 100%.

Group of orthologs #1298. Best score 137 bits
Score difference with first non-orthologous sequence - L.chalumnae:137 S.stipitis:137

H3AD86              	100.00%		A3LNE5              	100.00%
Bootstrap support for H3AD86 as seed ortholog is 100%.
Bootstrap support for A3LNE5 as seed ortholog is 100%.

Group of orthologs #1299. Best score 137 bits
Score difference with first non-orthologous sequence - L.chalumnae:137 S.stipitis:137

H3A8K4              	100.00%		A3LWU2              	100.00%
Bootstrap support for H3A8K4 as seed ortholog is 100%.
Bootstrap support for A3LWU2 as seed ortholog is 100%.

Group of orthologs #1300. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:34 S.stipitis:136

H3AKL4              	100.00%		A3GIA6              	100.00%
H3B5X1              	39.18%		
Bootstrap support for H3AKL4 as seed ortholog is 87%.
Bootstrap support for A3GIA6 as seed ortholog is 100%.

Group of orthologs #1301. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 S.stipitis:136

H2ZZX2              	100.00%		A3LNZ9              	100.00%
Bootstrap support for H2ZZX2 as seed ortholog is 100%.
Bootstrap support for A3LNZ9 as seed ortholog is 100%.

Group of orthologs #1302. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 S.stipitis:136

H3A946              	100.00%		A3GG32              	100.00%
Bootstrap support for H3A946 as seed ortholog is 100%.
Bootstrap support for A3GG32 as seed ortholog is 100%.

Group of orthologs #1303. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 S.stipitis:136

H3A6I2              	100.00%		A3LU63              	100.00%
Bootstrap support for H3A6I2 as seed ortholog is 97%.
Bootstrap support for A3LU63 as seed ortholog is 100%.

Group of orthologs #1304. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 S.stipitis:136

H3ATH4              	100.00%		A3GI95              	100.00%
Bootstrap support for H3ATH4 as seed ortholog is 100%.
Bootstrap support for A3GI95 as seed ortholog is 100%.

Group of orthologs #1305. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 S.stipitis:136

H3B869              	100.00%		A3LPE0              	100.00%
Bootstrap support for H3B869 as seed ortholog is 100%.
Bootstrap support for A3LPE0 as seed ortholog is 100%.

Group of orthologs #1306. Best score 136 bits
Score difference with first non-orthologous sequence - L.chalumnae:136 S.stipitis:136

H3BGK8              	100.00%		A3LZ78              	100.00%
Bootstrap support for H3BGK8 as seed ortholog is 100%.
Bootstrap support for A3LZ78 as seed ortholog is 100%.

Group of orthologs #1307. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 S.stipitis:23

H3AH67              	100.00%		A3LTW9              	100.00%
H3A6U3              	42.22%		
H2ZZ92              	7.45%		
Bootstrap support for H3AH67 as seed ortholog is 100%.
Bootstrap support for A3LTW9 as seed ortholog is 74%.
Alternative seed ortholog is A3M028 (23 bits away from this cluster)

Group of orthologs #1308. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 S.stipitis:135

H3B1A6              	100.00%		A3LZB3              	100.00%
H3AII0              	43.29%		
H3A011              	20.87%		
Bootstrap support for H3B1A6 as seed ortholog is 100%.
Bootstrap support for A3LZB3 as seed ortholog is 100%.

Group of orthologs #1309. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 S.stipitis:135

H3AG94              	100.00%		A3LZI5              	100.00%
H3A455              	88.32%		
Bootstrap support for H3AG94 as seed ortholog is 100%.
Bootstrap support for A3LZI5 as seed ortholog is 100%.

Group of orthologs #1310. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 S.stipitis:135

H3B3H5              	100.00%		A3LSX0              	100.00%
H3B985              	36.46%		
Bootstrap support for H3B3H5 as seed ortholog is 100%.
Bootstrap support for A3LSX0 as seed ortholog is 100%.

Group of orthologs #1311. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:135 S.stipitis:135

H3A4B7              	100.00%		A3LTC4              	100.00%
Bootstrap support for H3A4B7 as seed ortholog is 100%.
Bootstrap support for A3LTC4 as seed ortholog is 100%.

Group of orthologs #1312. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:14 S.stipitis:135

H3A4H1              	100.00%		A3LXY9              	100.00%
Bootstrap support for H3A4H1 as seed ortholog is 56%.
Alternative seed ortholog is H3AUY7 (14 bits away from this cluster)
Bootstrap support for A3LXY9 as seed ortholog is 100%.

Group of orthologs #1313. Best score 135 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 S.stipitis:135

M3XKD0              	100.00%		A3LQD8              	100.00%
Bootstrap support for M3XKD0 as seed ortholog is 98%.
Bootstrap support for A3LQD8 as seed ortholog is 100%.

Group of orthologs #1314. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:34 S.stipitis:134

H3AIP5              	100.00%		A3LWS3              	100.00%
H3AJR4              	51.41%		A3LR58              	54.42%
H3B4F4              	50.03%		
H3AJZ5              	48.16%		
H3AAY4              	29.09%		
H3B2R0              	21.39%		
H3AU42              	16.70%		
H3B6E5              	7.65%		
Bootstrap support for H3AIP5 as seed ortholog is 73%.
Alternative seed ortholog is H3A114 (34 bits away from this cluster)
Bootstrap support for A3LWS3 as seed ortholog is 100%.

Group of orthologs #1315. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 S.stipitis:134

H3A622              	100.00%		A3GGS4              	100.00%
M3XGL7              	46.37%		
Bootstrap support for H3A622 as seed ortholog is 100%.
Bootstrap support for A3GGS4 as seed ortholog is 100%.

Group of orthologs #1316. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 S.stipitis:80

H3A4F7              	100.00%		A3LWC2              	100.00%
H3APW8              	10.02%		
Bootstrap support for H3A4F7 as seed ortholog is 97%.
Bootstrap support for A3LWC2 as seed ortholog is 98%.

Group of orthologs #1317. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 S.stipitis:134

H3ARE2              	100.00%		A3M0H3              	100.00%
H3ABV3              	21.33%		
Bootstrap support for H3ARE2 as seed ortholog is 100%.
Bootstrap support for A3M0H3 as seed ortholog is 100%.

Group of orthologs #1318. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 S.stipitis:134

H3BBT6              	100.00%		A3LUE2              	100.00%
H3BBF5              	56.80%		
Bootstrap support for H3BBT6 as seed ortholog is 100%.
Bootstrap support for A3LUE2 as seed ortholog is 100%.

Group of orthologs #1319. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 S.stipitis:78

H2ZWB2              	100.00%		A3LSL3              	100.00%
Bootstrap support for H2ZWB2 as seed ortholog is 97%.
Bootstrap support for A3LSL3 as seed ortholog is 97%.

Group of orthologs #1320. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 S.stipitis:134

H2ZVQ1              	100.00%		A3LW50              	100.00%
Bootstrap support for H2ZVQ1 as seed ortholog is 99%.
Bootstrap support for A3LW50 as seed ortholog is 100%.

Group of orthologs #1321. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:5 S.stipitis:14

H2ZXP5              	100.00%		A3LVX1              	100.00%
Bootstrap support for H2ZXP5 as seed ortholog is 56%.
Alternative seed ortholog is H3ARI8 (5 bits away from this cluster)
Bootstrap support for A3LVX1 as seed ortholog is 61%.
Alternative seed ortholog is A3LMZ6 (14 bits away from this cluster)

Group of orthologs #1322. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 S.stipitis:134

H3AUY2              	100.00%		A3LPA0              	100.00%
Bootstrap support for H3AUY2 as seed ortholog is 84%.
Bootstrap support for A3LPA0 as seed ortholog is 100%.

Group of orthologs #1323. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 S.stipitis:134

H3AV11              	100.00%		A3LSS0              	100.00%
Bootstrap support for H3AV11 as seed ortholog is 100%.
Bootstrap support for A3LSS0 as seed ortholog is 100%.

Group of orthologs #1324. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 S.stipitis:55

H3B0Q9              	100.00%		A3LT57              	100.00%
Bootstrap support for H3B0Q9 as seed ortholog is 100%.
Bootstrap support for A3LT57 as seed ortholog is 98%.

Group of orthologs #1325. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 S.stipitis:134

H3B100              	100.00%		A3M0D9              	100.00%
Bootstrap support for H3B100 as seed ortholog is 100%.
Bootstrap support for A3M0D9 as seed ortholog is 100%.

Group of orthologs #1326. Best score 134 bits
Score difference with first non-orthologous sequence - L.chalumnae:134 S.stipitis:134

H3BIG3              	100.00%		A3LQL0              	100.00%
Bootstrap support for H3BIG3 as seed ortholog is 100%.
Bootstrap support for A3LQL0 as seed ortholog is 100%.

Group of orthologs #1327. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 S.stipitis:133

H3AT45              	100.00%		A3LND2              	100.00%
H3BAC9              	100.00%		A3LWR1              	100.00%
M3XH33              	17.42%		A3GHZ4              	57.32%
H2ZXI5              	16.55%		
M3XGT4              	9.60%		
H3ACZ0              	6.84%		
H2ZU91              	6.12%		
Bootstrap support for H3AT45 as seed ortholog is 100%.
Bootstrap support for H3BAC9 as seed ortholog is 100%.
Bootstrap support for A3LND2 as seed ortholog is 100%.
Bootstrap support for A3LWR1 as seed ortholog is 100%.

Group of orthologs #1328. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:33 S.stipitis:52

H3B4L5              	100.00%		A3LRT5              	100.00%
M3XK02              	22.71%		A3LR60              	58.13%
H3A3M6              	14.64%		A3LZV9              	44.58%
Bootstrap support for H3B4L5 as seed ortholog is 74%.
Alternative seed ortholog is H3BF84 (33 bits away from this cluster)
Bootstrap support for A3LRT5 as seed ortholog is 81%.

Group of orthologs #1329. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 S.stipitis:133

H3A493              	100.00%		A3LRY5              	100.00%
H3BCC3              	21.51%		A3LRY4              	36.29%
Bootstrap support for H3A493 as seed ortholog is 100%.
Bootstrap support for A3LRY5 as seed ortholog is 100%.

Group of orthologs #1330. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:24 S.stipitis:133

H3ACM5              	100.00%		A3GFQ9              	100.00%
H3B188              	26.97%		
H3BBZ2              	21.43%		
Bootstrap support for H3ACM5 as seed ortholog is 67%.
Alternative seed ortholog is H3A3K0 (24 bits away from this cluster)
Bootstrap support for A3GFQ9 as seed ortholog is 100%.

Group of orthologs #1331. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 S.stipitis:133

H3AUB8              	100.00%		A3LVA1              	100.00%
H3AIT2              	37.40%		
H2ZWP4              	5.18%		
Bootstrap support for H3AUB8 as seed ortholog is 100%.
Bootstrap support for A3LVA1 as seed ortholog is 100%.

Group of orthologs #1332. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 S.stipitis:49

H2ZWR6              	100.00%		A3GF36              	100.00%
H3A574              	54.31%		
Bootstrap support for H2ZWR6 as seed ortholog is 100%.
Bootstrap support for A3GF36 as seed ortholog is 88%.

Group of orthologs #1333. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 S.stipitis:133

H2ZT56              	100.00%		A3LNZ7              	100.00%
Bootstrap support for H2ZT56 as seed ortholog is 100%.
Bootstrap support for A3LNZ7 as seed ortholog is 100%.

Group of orthologs #1334. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 S.stipitis:133

H2ZZH6              	100.00%		A3LNI8              	100.00%
Bootstrap support for H2ZZH6 as seed ortholog is 100%.
Bootstrap support for A3LNI8 as seed ortholog is 100%.

Group of orthologs #1335. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 S.stipitis:133

H3A3Z4              	100.00%		A3LPR7              	100.00%
Bootstrap support for H3A3Z4 as seed ortholog is 100%.
Bootstrap support for A3LPR7 as seed ortholog is 100%.

Group of orthologs #1336. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 S.stipitis:133

H3AMH8              	100.00%		A3LNM6              	100.00%
Bootstrap support for H3AMH8 as seed ortholog is 100%.
Bootstrap support for A3LNM6 as seed ortholog is 100%.

Group of orthologs #1337. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 S.stipitis:133

H3ALC4              	100.00%		A3LZH3              	100.00%
Bootstrap support for H3ALC4 as seed ortholog is 100%.
Bootstrap support for A3LZH3 as seed ortholog is 100%.

Group of orthologs #1338. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 S.stipitis:133

H3AZJ0              	100.00%		A3LT86              	100.00%
Bootstrap support for H3AZJ0 as seed ortholog is 100%.
Bootstrap support for A3LT86 as seed ortholog is 100%.

Group of orthologs #1339. Best score 133 bits
Score difference with first non-orthologous sequence - L.chalumnae:133 S.stipitis:133

H3B1N8              	100.00%		A3LW90              	100.00%
Bootstrap support for H3B1N8 as seed ortholog is 100%.
Bootstrap support for A3LW90 as seed ortholog is 100%.

Group of orthologs #1340. Best score 132 bits
Score difference with first non-orthologous sequence - L.chalumnae:132 S.stipitis:132

H3AH26              	100.00%		A3LZ02              	100.00%
H3AXL2              	81.63%		A3GFX8              	70.73%
Bootstrap support for H3AH26 as seed ortholog is 100%.
Bootstrap support for A3LZ02 as seed ortholog is 100%.

Group of orthologs #1341. Best score 132 bits
Score difference with first non-orthologous sequence - L.chalumnae:132 S.stipitis:132

H3AJE5              	100.00%		A3LST6              	100.00%
H2ZSG4              	5.28%		
Bootstrap support for H3AJE5 as seed ortholog is 100%.
Bootstrap support for A3LST6 as seed ortholog is 100%.

Group of orthologs #1342. Best score 132 bits
Score difference with first non-orthologous sequence - L.chalumnae:132 S.stipitis:2

H3AIQ9              	100.00%		A3GGM8              	100.00%
Bootstrap support for H3AIQ9 as seed ortholog is 100%.
Bootstrap support for A3GGM8 as seed ortholog is 54%.
Alternative seed ortholog is A3LZC6 (2 bits away from this cluster)

Group of orthologs #1343. Best score 132 bits
Score difference with first non-orthologous sequence - L.chalumnae:132 S.stipitis:132

H3AGW2              	100.00%		A3LRS5              	100.00%
Bootstrap support for H3AGW2 as seed ortholog is 100%.
Bootstrap support for A3LRS5 as seed ortholog is 100%.

Group of orthologs #1344. Best score 132 bits
Score difference with first non-orthologous sequence - L.chalumnae:132 S.stipitis:132

H3AL27              	100.00%		A3LNT2              	100.00%
Bootstrap support for H3AL27 as seed ortholog is 100%.
Bootstrap support for A3LNT2 as seed ortholog is 100%.

Group of orthologs #1345. Best score 132 bits
Score difference with first non-orthologous sequence - L.chalumnae:132 S.stipitis:132

H3ALY6              	100.00%		A3LS70              	100.00%
Bootstrap support for H3ALY6 as seed ortholog is 100%.
Bootstrap support for A3LS70 as seed ortholog is 100%.

Group of orthologs #1346. Best score 132 bits
Score difference with first non-orthologous sequence - L.chalumnae:132 S.stipitis:132

H3BAW9              	100.00%		A3LNF7              	100.00%
Bootstrap support for H3BAW9 as seed ortholog is 100%.
Bootstrap support for A3LNF7 as seed ortholog is 100%.

Group of orthologs #1347. Best score 132 bits
Score difference with first non-orthologous sequence - L.chalumnae:132 S.stipitis:132

H3AZH6              	100.00%		A3LZL2              	100.00%
Bootstrap support for H3AZH6 as seed ortholog is 100%.
Bootstrap support for A3LZL2 as seed ortholog is 100%.

Group of orthologs #1348. Best score 132 bits
Score difference with first non-orthologous sequence - L.chalumnae:36 S.stipitis:132

H3BBU3              	100.00%		A3LV92              	100.00%
Bootstrap support for H3BBU3 as seed ortholog is 90%.
Bootstrap support for A3LV92 as seed ortholog is 100%.

Group of orthologs #1349. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 S.stipitis:131

H3B1Z3              	100.00%		A3LYQ1              	100.00%
H3AT25              	40.80%		
H3B9S0              	28.31%		
H3BBB2              	26.59%		
H3AM34              	13.89%		
H3B0T1              	12.81%		
H3AS13              	11.95%		
H3AF76              	11.73%		
H3APN0              	10.98%		
H3ANT2              	9.36%		
H3A784              	6.67%		
H2ZVK5              	5.81%		
Bootstrap support for H3B1Z3 as seed ortholog is 92%.
Bootstrap support for A3LYQ1 as seed ortholog is 100%.

Group of orthologs #1350. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 S.stipitis:131

H2ZXS0              	100.00%		A3LSU0              	100.00%
H3AZN1              	69.17%		
H3AG23              	18.25%		
H3ABC3              	10.12%		
Bootstrap support for H2ZXS0 as seed ortholog is 100%.
Bootstrap support for A3LSU0 as seed ortholog is 100%.

Group of orthologs #1351. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 S.stipitis:131

M3XL51              	100.00%		A3LYB1              	100.00%
H3ALK7              	53.29%		
H3AD17              	28.51%		
M3XLD2              	18.64%		
Bootstrap support for M3XL51 as seed ortholog is 100%.
Bootstrap support for A3LYB1 as seed ortholog is 100%.

Group of orthologs #1352. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:39 S.stipitis:131

H3A215              	100.00%		A3LXH8              	100.00%
H3AZ37              	36.76%		
H3ACH4              	36.61%		
Bootstrap support for H3A215 as seed ortholog is 77%.
Bootstrap support for A3LXH8 as seed ortholog is 100%.

Group of orthologs #1353. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 S.stipitis:131

H3ARQ4              	100.00%		A3LPX2              	100.00%
H3BDW4              	52.05%		
H3A9R9              	26.25%		
Bootstrap support for H3ARQ4 as seed ortholog is 94%.
Bootstrap support for A3LPX2 as seed ortholog is 100%.

Group of orthologs #1354. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 S.stipitis:131

H2ZS14              	100.00%		A3LQK8              	100.00%
H3A3V5              	32.24%		
Bootstrap support for H2ZS14 as seed ortholog is 100%.
Bootstrap support for A3LQK8 as seed ortholog is 100%.

Group of orthologs #1355. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 S.stipitis:131

H2ZWM6              	100.00%		A3LMS3              	100.00%
H3A9U3              	7.67%		
Bootstrap support for H2ZWM6 as seed ortholog is 100%.
Bootstrap support for A3LMS3 as seed ortholog is 100%.

Group of orthologs #1356. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 S.stipitis:131

H3A4E1              	100.00%		A3LVH2              	100.00%
M3XGN6              	50.51%		
Bootstrap support for H3A4E1 as seed ortholog is 100%.
Bootstrap support for A3LVH2 as seed ortholog is 100%.

Group of orthologs #1357. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 S.stipitis:131

H3AHR3              	100.00%		A3GGC2              	100.00%
                    	       		A3M077              	10.32%
Bootstrap support for H3AHR3 as seed ortholog is 100%.
Bootstrap support for A3GGC2 as seed ortholog is 100%.

Group of orthologs #1358. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 S.stipitis:131

H3A2R5              	100.00%		A3GGI6              	100.00%
Bootstrap support for H3A2R5 as seed ortholog is 100%.
Bootstrap support for A3GGI6 as seed ortholog is 100%.

Group of orthologs #1359. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 S.stipitis:131

H3A5B8              	100.00%		A3LS71              	100.00%
Bootstrap support for H3A5B8 as seed ortholog is 100%.
Bootstrap support for A3LS71 as seed ortholog is 100%.

Group of orthologs #1360. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 S.stipitis:89

H3A6P0              	100.00%		A3LW18              	100.00%
Bootstrap support for H3A6P0 as seed ortholog is 100%.
Bootstrap support for A3LW18 as seed ortholog is 100%.

Group of orthologs #1361. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 S.stipitis:131

H3APT4              	100.00%		A3M0I6              	100.00%
Bootstrap support for H3APT4 as seed ortholog is 99%.
Bootstrap support for A3M0I6 as seed ortholog is 100%.

Group of orthologs #1362. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 S.stipitis:131

H3B9E4              	100.00%		A3GFA6              	100.00%
Bootstrap support for H3B9E4 as seed ortholog is 100%.
Bootstrap support for A3GFA6 as seed ortholog is 100%.

Group of orthologs #1363. Best score 131 bits
Score difference with first non-orthologous sequence - L.chalumnae:131 S.stipitis:131

H3B7D2              	100.00%		A3LNY4              	100.00%
Bootstrap support for H3B7D2 as seed ortholog is 100%.
Bootstrap support for A3LNY4 as seed ortholog is 100%.

Group of orthologs #1364. Best score 130 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 S.stipitis:7

H3A4A5              	100.00%		A3LYM0              	100.00%
H3ACI2              	13.36%		
H3A870              	9.82%		
Bootstrap support for H3A4A5 as seed ortholog is 100%.
Bootstrap support for A3LYM0 as seed ortholog is 57%.
Alternative seed ortholog is A3LPV6 (7 bits away from this cluster)

Group of orthologs #1365. Best score 130 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 S.stipitis:130

H3APW7              	100.00%		A3GGS3              	100.00%
H2ZRM6              	31.62%		
Bootstrap support for H3APW7 as seed ortholog is 100%.
Bootstrap support for A3GGS3 as seed ortholog is 100%.

Group of orthologs #1366. Best score 130 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 S.stipitis:130

H3B3U0              	100.00%		A3LT03              	100.00%
H3B3F2              	22.62%		
Bootstrap support for H3B3U0 as seed ortholog is 100%.
Bootstrap support for A3LT03 as seed ortholog is 100%.

Group of orthologs #1367. Best score 130 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 S.stipitis:130

H3B274              	100.00%		A3M0A8              	100.00%
H3A8D8              	69.05%		
Bootstrap support for H3B274 as seed ortholog is 98%.
Bootstrap support for A3M0A8 as seed ortholog is 100%.

Group of orthologs #1368. Best score 130 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 S.stipitis:130

H3A4I9              	100.00%		A3LX88              	100.00%
Bootstrap support for H3A4I9 as seed ortholog is 100%.
Bootstrap support for A3LX88 as seed ortholog is 100%.

Group of orthologs #1369. Best score 130 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 S.stipitis:130

H3AU25              	100.00%		A3LVS4              	100.00%
Bootstrap support for H3AU25 as seed ortholog is 100%.
Bootstrap support for A3LVS4 as seed ortholog is 100%.

Group of orthologs #1370. Best score 130 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 S.stipitis:130

M3XJJ1              	100.00%		A3GFN2              	100.00%
Bootstrap support for M3XJJ1 as seed ortholog is 100%.
Bootstrap support for A3GFN2 as seed ortholog is 100%.

Group of orthologs #1371. Best score 130 bits
Score difference with first non-orthologous sequence - L.chalumnae:130 S.stipitis:130

H3BFN3              	100.00%		A3LSW2              	100.00%
Bootstrap support for H3BFN3 as seed ortholog is 100%.
Bootstrap support for A3LSW2 as seed ortholog is 100%.

Group of orthologs #1372. Best score 129 bits
Score difference with first non-orthologous sequence - L.chalumnae:129 S.stipitis:129

H3B5F5              	100.00%		A3GFZ8              	100.00%
H3A2Z1              	45.64%		A3LVI6              	13.39%
H3AS69              	38.53%		
Bootstrap support for H3B5F5 as seed ortholog is 100%.
Bootstrap support for A3GFZ8 as seed ortholog is 100%.

Group of orthologs #1373. Best score 129 bits
Score difference with first non-orthologous sequence - L.chalumnae:129 S.stipitis:129

H3B1V1              	100.00%		A3GID1              	100.00%
Bootstrap support for H3B1V1 as seed ortholog is 100%.
Bootstrap support for A3GID1 as seed ortholog is 100%.

Group of orthologs #1374. Best score 129 bits
Score difference with first non-orthologous sequence - L.chalumnae:129 S.stipitis:129

H3BCM6              	100.00%		A3GG28              	100.00%
Bootstrap support for H3BCM6 as seed ortholog is 100%.
Bootstrap support for A3GG28 as seed ortholog is 100%.

Group of orthologs #1375. Best score 129 bits
Score difference with first non-orthologous sequence - L.chalumnae:129 S.stipitis:129

H3B6U6              	100.00%		A3LU02              	100.00%
Bootstrap support for H3B6U6 as seed ortholog is 100%.
Bootstrap support for A3LU02 as seed ortholog is 100%.

Group of orthologs #1376. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 S.stipitis:17

H3B270              	100.00%		A3LNQ0              	100.00%
H2ZXJ7              	52.00%		A3LNP9              	51.26%
H3BEA6              	42.10%		
H3A5P5              	35.81%		
H3AXM0              	29.52%		
H2ZSJ0              	20.00%		
Bootstrap support for H3B270 as seed ortholog is 100%.
Bootstrap support for A3LNQ0 as seed ortholog is 64%.
Alternative seed ortholog is A3GFG2 (17 bits away from this cluster)

Group of orthologs #1377. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:6 S.stipitis:45

H3BDR1              	100.00%		A3LSM4              	100.00%
H3BC71              	18.38%		
H3AT03              	5.55%		
Bootstrap support for H3BDR1 as seed ortholog is 46%.
Alternative seed ortholog is H3BBE6 (6 bits away from this cluster)
Bootstrap support for A3LSM4 as seed ortholog is 65%.
Alternative seed ortholog is A3LRR0 (45 bits away from this cluster)

Group of orthologs #1378. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 S.stipitis:128

H3AGC4              	100.00%		A3LSU6              	100.00%
H3AU62              	12.96%		
Bootstrap support for H3AGC4 as seed ortholog is 100%.
Bootstrap support for A3LSU6 as seed ortholog is 100%.

Group of orthologs #1379. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 S.stipitis:128

H3ATA4              	100.00%		A3LQI3              	100.00%
H3ATK9              	30.06%		
Bootstrap support for H3ATA4 as seed ortholog is 100%.
Bootstrap support for A3LQI3 as seed ortholog is 100%.

Group of orthologs #1380. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 S.stipitis:128

H3A667              	100.00%		A3LTX8              	100.00%
Bootstrap support for H3A667 as seed ortholog is 86%.
Bootstrap support for A3LTX8 as seed ortholog is 100%.

Group of orthologs #1381. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 S.stipitis:128

H3AD65              	100.00%		A3LS93              	100.00%
Bootstrap support for H3AD65 as seed ortholog is 100%.
Bootstrap support for A3LS93 as seed ortholog is 100%.

Group of orthologs #1382. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 S.stipitis:128

H3AGZ0              	100.00%		A3LSB8              	100.00%
Bootstrap support for H3AGZ0 as seed ortholog is 100%.
Bootstrap support for A3LSB8 as seed ortholog is 100%.

Group of orthologs #1383. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 S.stipitis:37

H3AA45              	100.00%		A3M019              	100.00%
Bootstrap support for H3AA45 as seed ortholog is 90%.
Bootstrap support for A3M019 as seed ortholog is 85%.

Group of orthologs #1384. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:26 S.stipitis:3

H3AIY0              	100.00%		A3LT13              	100.00%
Bootstrap support for H3AIY0 as seed ortholog is 86%.
Bootstrap support for A3LT13 as seed ortholog is 57%.
Alternative seed ortholog is A3LUB0 (3 bits away from this cluster)

Group of orthologs #1385. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 S.stipitis:33

H3AS15              	100.00%		A3LQW1              	100.00%
Bootstrap support for H3AS15 as seed ortholog is 100%.
Bootstrap support for A3LQW1 as seed ortholog is 93%.

Group of orthologs #1386. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 S.stipitis:128

H3AWZ9              	100.00%		A3GIE0              	100.00%
Bootstrap support for H3AWZ9 as seed ortholog is 100%.
Bootstrap support for A3GIE0 as seed ortholog is 100%.

Group of orthologs #1387. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 S.stipitis:128

H3AZ11              	100.00%		A3GH49              	100.00%
Bootstrap support for H3AZ11 as seed ortholog is 100%.
Bootstrap support for A3GH49 as seed ortholog is 100%.

Group of orthologs #1388. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 S.stipitis:128

H3AXH8              	100.00%		A3LQI4              	100.00%
Bootstrap support for H3AXH8 as seed ortholog is 100%.
Bootstrap support for A3LQI4 as seed ortholog is 100%.

Group of orthologs #1389. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 S.stipitis:128

H3B200              	100.00%		A3LS29              	100.00%
Bootstrap support for H3B200 as seed ortholog is 100%.
Bootstrap support for A3LS29 as seed ortholog is 100%.

Group of orthologs #1390. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 S.stipitis:128

H3B6K6              	100.00%		A3LRY9              	100.00%
Bootstrap support for H3B6K6 as seed ortholog is 100%.
Bootstrap support for A3LRY9 as seed ortholog is 100%.

Group of orthologs #1391. Best score 128 bits
Score difference with first non-orthologous sequence - L.chalumnae:128 S.stipitis:52

H3BEQ3              	100.00%		A3GFW7              	100.00%
Bootstrap support for H3BEQ3 as seed ortholog is 100%.
Bootstrap support for A3GFW7 as seed ortholog is 97%.

Group of orthologs #1392. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 S.stipitis:127

H3ACP6              	100.00%		A3LS13              	100.00%
M3XI37              	26.89%		
H3AXM3              	17.28%		
Bootstrap support for H3ACP6 as seed ortholog is 100%.
Bootstrap support for A3LS13 as seed ortholog is 100%.

Group of orthologs #1393. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 S.stipitis:127

H3AIG7              	100.00%		A3M0A9              	100.00%
H3ABI1              	42.14%		
Bootstrap support for H3AIG7 as seed ortholog is 100%.
Bootstrap support for A3M0A9 as seed ortholog is 100%.

Group of orthologs #1394. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 S.stipitis:127

H3A9T0              	100.00%		A3LPE7              	100.00%
Bootstrap support for H3A9T0 as seed ortholog is 90%.
Bootstrap support for A3LPE7 as seed ortholog is 100%.

Group of orthologs #1395. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 S.stipitis:127

H3AEF1              	100.00%		A3LY19              	100.00%
Bootstrap support for H3AEF1 as seed ortholog is 100%.
Bootstrap support for A3LY19 as seed ortholog is 100%.

Group of orthologs #1396. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:127 S.stipitis:66

H3AUA2              	100.00%		A3GHV8              	100.00%
Bootstrap support for H3AUA2 as seed ortholog is 100%.
Bootstrap support for A3GHV8 as seed ortholog is 99%.

Group of orthologs #1397. Best score 127 bits
Score difference with first non-orthologous sequence - L.chalumnae:33 S.stipitis:127

H3AUG6              	100.00%		A3LNU7              	100.00%
Bootstrap support for H3AUG6 as seed ortholog is 87%.
Bootstrap support for A3LNU7 as seed ortholog is 100%.

Group of orthologs #1398. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 S.stipitis:34

H3AVZ3              	100.00%		A3LWJ3              	100.00%
H3ABB4              	50.82%		A3LNJ5              	11.57%
                    	       		A3GHR3              	9.80%
Bootstrap support for H3AVZ3 as seed ortholog is 89%.
Bootstrap support for A3LWJ3 as seed ortholog is 85%.

Group of orthologs #1399. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 S.stipitis:126

H2ZV63              	100.00%		A3GI41              	100.00%
H3AGU1              	78.83%		
Bootstrap support for H2ZV63 as seed ortholog is 100%.
Bootstrap support for A3GI41 as seed ortholog is 100%.

Group of orthologs #1400. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 S.stipitis:126

H3ATT1              	100.00%		A3LXQ8              	100.00%
H3AWG8              	47.77%		
Bootstrap support for H3ATT1 as seed ortholog is 100%.
Bootstrap support for A3LXQ8 as seed ortholog is 100%.

Group of orthologs #1401. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 S.stipitis:126

H3BAR8              	100.00%		A3GGK5              	100.00%
H3B349              	19.10%		
Bootstrap support for H3BAR8 as seed ortholog is 100%.
Bootstrap support for A3GGK5 as seed ortholog is 100%.

Group of orthologs #1402. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 S.stipitis:126

H2ZUP0              	100.00%		A3GGG2              	100.00%
Bootstrap support for H2ZUP0 as seed ortholog is 100%.
Bootstrap support for A3GGG2 as seed ortholog is 100%.

Group of orthologs #1403. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 S.stipitis:126

H3A5X8              	100.00%		A3LY75              	100.00%
Bootstrap support for H3A5X8 as seed ortholog is 100%.
Bootstrap support for A3LY75 as seed ortholog is 100%.

Group of orthologs #1404. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 S.stipitis:126

H3A9N4              	100.00%		A3LXP1              	100.00%
Bootstrap support for H3A9N4 as seed ortholog is 92%.
Bootstrap support for A3LXP1 as seed ortholog is 100%.

Group of orthologs #1405. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 S.stipitis:126

H3AGP5              	100.00%		A3LSC6              	100.00%
Bootstrap support for H3AGP5 as seed ortholog is 100%.
Bootstrap support for A3LSC6 as seed ortholog is 100%.

Group of orthologs #1406. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 S.stipitis:126

H3B2E4              	100.00%		A3GF64              	100.00%
Bootstrap support for H3B2E4 as seed ortholog is 100%.
Bootstrap support for A3GF64 as seed ortholog is 100%.

Group of orthologs #1407. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 S.stipitis:126

H3ASJ3              	100.00%		A3M078              	100.00%
Bootstrap support for H3ASJ3 as seed ortholog is 100%.
Bootstrap support for A3M078 as seed ortholog is 100%.

Group of orthologs #1408. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:126 S.stipitis:126

H3BBG8              	100.00%		A3LNG9              	100.00%
Bootstrap support for H3BBG8 as seed ortholog is 100%.
Bootstrap support for A3LNG9 as seed ortholog is 100%.

Group of orthologs #1409. Best score 126 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 S.stipitis:126

H3BH65              	100.00%		A3LQ56              	100.00%
Bootstrap support for H3BH65 as seed ortholog is 97%.
Bootstrap support for A3LQ56 as seed ortholog is 100%.

Group of orthologs #1410. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 S.stipitis:125

H3AFC4              	100.00%		A3LPV2              	100.00%
H3BE43              	51.82%		
Bootstrap support for H3AFC4 as seed ortholog is 100%.
Bootstrap support for A3LPV2 as seed ortholog is 100%.

Group of orthologs #1411. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 S.stipitis:125

H3A7C3              	100.00%		A3LTY1              	100.00%
Bootstrap support for H3A7C3 as seed ortholog is 100%.
Bootstrap support for A3LTY1 as seed ortholog is 100%.

Group of orthologs #1412. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 S.stipitis:83

H3AMQ6              	100.00%		A3LPX1              	100.00%
Bootstrap support for H3AMQ6 as seed ortholog is 100%.
Bootstrap support for A3LPX1 as seed ortholog is 99%.

Group of orthologs #1413. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 S.stipitis:125

H3ART8              	100.00%		A3LPE9              	100.00%
Bootstrap support for H3ART8 as seed ortholog is 99%.
Bootstrap support for A3LPE9 as seed ortholog is 100%.

Group of orthologs #1414. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 S.stipitis:125

H3AL79              	100.00%		A3LWT5              	100.00%
Bootstrap support for H3AL79 as seed ortholog is 100%.
Bootstrap support for A3LWT5 as seed ortholog is 100%.

Group of orthologs #1415. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 S.stipitis:125

H3B7W6              	100.00%		A3GFC3              	100.00%
Bootstrap support for H3B7W6 as seed ortholog is 100%.
Bootstrap support for A3GFC3 as seed ortholog is 100%.

Group of orthologs #1416. Best score 125 bits
Score difference with first non-orthologous sequence - L.chalumnae:125 S.stipitis:125

H3B5U5              	100.00%		A3LQK7              	100.00%
Bootstrap support for H3B5U5 as seed ortholog is 100%.
Bootstrap support for A3LQK7 as seed ortholog is 100%.

Group of orthologs #1417. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 S.stipitis:124

H3AFP3              	100.00%		A3LWT2              	100.00%
H3A248              	10.69%		
H2ZSH6              	10.33%		
H2ZTP8              	8.93%		
H3A8Z3              	6.11%		
H3AL09              	5.52%		
Bootstrap support for H3AFP3 as seed ortholog is 100%.
Bootstrap support for A3LWT2 as seed ortholog is 100%.

Group of orthologs #1418. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:33 S.stipitis:25

H3A101              	100.00%		A3LP30              	100.00%
H3A3M4              	28.95%		
Bootstrap support for H3A101 as seed ortholog is 81%.
Bootstrap support for A3LP30 as seed ortholog is 77%.

Group of orthologs #1419. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 S.stipitis:67

H3ATU4              	100.00%		A3LNP0              	100.00%
H3AUW9              	57.99%		
Bootstrap support for H3ATU4 as seed ortholog is 100%.
Bootstrap support for A3LNP0 as seed ortholog is 95%.

Group of orthologs #1420. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 S.stipitis:124

H3B128              	100.00%		A3LNC5              	100.00%
                    	       		A3LRU8              	100.00%
Bootstrap support for H3B128 as seed ortholog is 100%.
Bootstrap support for A3LNC5 as seed ortholog is 100%.
Bootstrap support for A3LRU8 as seed ortholog is 100%.

Group of orthologs #1421. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 S.stipitis:124

H3B6I1              	100.00%		A3LU38              	100.00%
H3APN9              	40.14%		
Bootstrap support for H3B6I1 as seed ortholog is 100%.
Bootstrap support for A3LU38 as seed ortholog is 100%.

Group of orthologs #1422. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 S.stipitis:124

H2ZTX1              	100.00%		A3LYP0              	100.00%
Bootstrap support for H2ZTX1 as seed ortholog is 100%.
Bootstrap support for A3LYP0 as seed ortholog is 100%.

Group of orthologs #1423. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 S.stipitis:124

H3ACH9              	100.00%		A3LRL1              	100.00%
Bootstrap support for H3ACH9 as seed ortholog is 100%.
Bootstrap support for A3LRL1 as seed ortholog is 100%.

Group of orthologs #1424. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 S.stipitis:124

H3APQ5              	100.00%		A3LQC9              	100.00%
Bootstrap support for H3APQ5 as seed ortholog is 100%.
Bootstrap support for A3LQC9 as seed ortholog is 100%.

Group of orthologs #1425. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 S.stipitis:124

H3AWA1              	100.00%		A3LSI8              	100.00%
Bootstrap support for H3AWA1 as seed ortholog is 100%.
Bootstrap support for A3LSI8 as seed ortholog is 100%.

Group of orthologs #1426. Best score 124 bits
Score difference with first non-orthologous sequence - L.chalumnae:124 S.stipitis:124

H3B7Z2              	100.00%		A3LR86              	100.00%
Bootstrap support for H3B7Z2 as seed ortholog is 100%.
Bootstrap support for A3LR86 as seed ortholog is 100%.

Group of orthologs #1427. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:24 S.stipitis:61

H3A2W4              	100.00%		A3LV69              	100.00%
H3B4R1              	32.51%		A3GGA9              	53.63%
H3B4T9              	31.47%		
Bootstrap support for H3A2W4 as seed ortholog is 70%.
Alternative seed ortholog is H3BHD0 (24 bits away from this cluster)
Bootstrap support for A3LV69 as seed ortholog is 94%.

Group of orthologs #1428. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 S.stipitis:123

H3AKF6              	100.00%		A3LW62              	100.00%
H3B324              	24.23%		
Bootstrap support for H3AKF6 as seed ortholog is 96%.
Bootstrap support for A3LW62 as seed ortholog is 100%.

Group of orthologs #1429. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 S.stipitis:123

H3APE6              	100.00%		A3LW96              	100.00%
H2ZV00              	11.62%		
Bootstrap support for H3APE6 as seed ortholog is 77%.
Bootstrap support for A3LW96 as seed ortholog is 100%.

Group of orthologs #1430. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 S.stipitis:123

H3AVA0              	100.00%		A3LSH1              	100.00%
                    	       		A3GG06              	11.97%
Bootstrap support for H3AVA0 as seed ortholog is 100%.
Bootstrap support for A3LSH1 as seed ortholog is 100%.

Group of orthologs #1431. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 S.stipitis:54

H3BAL5              	100.00%		A3LQG0              	100.00%
H3B824              	66.96%		
Bootstrap support for H3BAL5 as seed ortholog is 99%.
Bootstrap support for A3LQG0 as seed ortholog is 96%.

Group of orthologs #1432. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 S.stipitis:123

H2ZYK6              	100.00%		A3GFD6              	100.00%
Bootstrap support for H2ZYK6 as seed ortholog is 100%.
Bootstrap support for A3GFD6 as seed ortholog is 100%.

Group of orthologs #1433. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 S.stipitis:123

H3A8Q5              	100.00%		A3LS99              	100.00%
Bootstrap support for H3A8Q5 as seed ortholog is 100%.
Bootstrap support for A3LS99 as seed ortholog is 100%.

Group of orthologs #1434. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 S.stipitis:123

H3B6K4              	100.00%		A3GGM1              	100.00%
Bootstrap support for H3B6K4 as seed ortholog is 100%.
Bootstrap support for A3GGM1 as seed ortholog is 100%.

Group of orthologs #1435. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 S.stipitis:123

H3AYT9              	100.00%		A3LTC6              	100.00%
Bootstrap support for H3AYT9 as seed ortholog is 100%.
Bootstrap support for A3LTC6 as seed ortholog is 100%.

Group of orthologs #1436. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 S.stipitis:123

H3BAB5              	100.00%		A3LN04              	100.00%
Bootstrap support for H3BAB5 as seed ortholog is 100%.
Bootstrap support for A3LN04 as seed ortholog is 100%.

Group of orthologs #1437. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 S.stipitis:123

H3B8D0              	100.00%		A3LRG3              	100.00%
Bootstrap support for H3B8D0 as seed ortholog is 100%.
Bootstrap support for A3LRG3 as seed ortholog is 100%.

Group of orthologs #1438. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 S.stipitis:123

H3BGB3              	100.00%		A3GFR4              	100.00%
Bootstrap support for H3BGB3 as seed ortholog is 100%.
Bootstrap support for A3GFR4 as seed ortholog is 100%.

Group of orthologs #1439. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 S.stipitis:123

H3BD85              	100.00%		A3LNB4              	100.00%
Bootstrap support for H3BD85 as seed ortholog is 100%.
Bootstrap support for A3LNB4 as seed ortholog is 100%.

Group of orthologs #1440. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 S.stipitis:123

H3B418              	100.00%		A3LW94              	100.00%
Bootstrap support for H3B418 as seed ortholog is 100%.
Bootstrap support for A3LW94 as seed ortholog is 100%.

Group of orthologs #1441. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:16 S.stipitis:46

H3B211              	100.00%		A3LYC3              	100.00%
Bootstrap support for H3B211 as seed ortholog is 66%.
Alternative seed ortholog is H3AZV5 (16 bits away from this cluster)
Bootstrap support for A3LYC3 as seed ortholog is 88%.

Group of orthologs #1442. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 S.stipitis:123

M3XLB8              	100.00%		A3GF88              	100.00%
Bootstrap support for M3XLB8 as seed ortholog is 100%.
Bootstrap support for A3GF88 as seed ortholog is 100%.

Group of orthologs #1443. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 S.stipitis:61

H3BFP8              	100.00%		A3LQ17              	100.00%
Bootstrap support for H3BFP8 as seed ortholog is 100%.
Bootstrap support for A3LQ17 as seed ortholog is 98%.

Group of orthologs #1444. Best score 123 bits
Score difference with first non-orthologous sequence - L.chalumnae:123 S.stipitis:123

M3XJ75              	100.00%		A3LZR7              	100.00%
Bootstrap support for M3XJ75 as seed ortholog is 100%.
Bootstrap support for A3LZR7 as seed ortholog is 100%.

Group of orthologs #1445. Best score 122 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 S.stipitis:122

H3B2C2              	100.00%		A3LXL2              	100.00%
H3API5              	100.00%		A3LYI3              	100.00%
Bootstrap support for H3B2C2 as seed ortholog is 85%.
Bootstrap support for H3API5 as seed ortholog is 87%.
Bootstrap support for A3LXL2 as seed ortholog is 100%.
Bootstrap support for A3LYI3 as seed ortholog is 100%.

Group of orthologs #1446. Best score 122 bits
Score difference with first non-orthologous sequence - L.chalumnae:122 S.stipitis:122

H3A0E0              	100.00%		A3LNK5              	100.00%
H3B4H4              	50.60%		
Bootstrap support for H3A0E0 as seed ortholog is 100%.
Bootstrap support for A3LNK5 as seed ortholog is 100%.

Group of orthologs #1447. Best score 122 bits
Score difference with first non-orthologous sequence - L.chalumnae:122 S.stipitis:122

H3B855              	100.00%		A3LYA2              	100.00%
Bootstrap support for H3B855 as seed ortholog is 100%.
Bootstrap support for A3LYA2 as seed ortholog is 100%.

Group of orthologs #1448. Best score 122 bits
Score difference with first non-orthologous sequence - L.chalumnae:122 S.stipitis:122

H3BDZ6              	100.00%		A3LUG6              	100.00%
Bootstrap support for H3BDZ6 as seed ortholog is 100%.
Bootstrap support for A3LUG6 as seed ortholog is 100%.

Group of orthologs #1449. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 S.stipitis:121

H3BEH2              	100.00%		A3LYS2              	100.00%
H2ZVK9              	23.64%		A3LX66              	16.90%
Bootstrap support for H3BEH2 as seed ortholog is 100%.
Bootstrap support for A3LYS2 as seed ortholog is 100%.

Group of orthologs #1450. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 S.stipitis:121

H3AD09              	100.00%		A3LXR3              	100.00%
H3BIN8              	58.52%		
Bootstrap support for H3AD09 as seed ortholog is 100%.
Bootstrap support for A3LXR3 as seed ortholog is 100%.

Group of orthologs #1451. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 S.stipitis:121

H3ASE7              	100.00%		A3LZT7              	100.00%
H3B8V7              	63.86%		
Bootstrap support for H3ASE7 as seed ortholog is 100%.
Bootstrap support for A3LZT7 as seed ortholog is 100%.

Group of orthologs #1452. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 S.stipitis:121

H3B6B2              	100.00%		A3LUS9              	100.00%
H3BAK0              	35.36%		
Bootstrap support for H3B6B2 as seed ortholog is 100%.
Bootstrap support for A3LUS9 as seed ortholog is 100%.

Group of orthologs #1453. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 S.stipitis:121

H2ZSJ7              	100.00%		A3LRC0              	100.00%
Bootstrap support for H2ZSJ7 as seed ortholog is 100%.
Bootstrap support for A3LRC0 as seed ortholog is 100%.

Group of orthologs #1454. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:3 S.stipitis:121

H3A8F1              	100.00%		A3LPE2              	100.00%
Bootstrap support for H3A8F1 as seed ortholog is 52%.
Alternative seed ortholog is H2ZU08 (3 bits away from this cluster)
Bootstrap support for A3LPE2 as seed ortholog is 100%.

Group of orthologs #1455. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 S.stipitis:121

H3AFW8              	100.00%		A3LMS0              	100.00%
Bootstrap support for H3AFW8 as seed ortholog is 88%.
Bootstrap support for A3LMS0 as seed ortholog is 100%.

Group of orthologs #1456. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:121 S.stipitis:121

H3ASK7              	100.00%		A3LV76              	100.00%
Bootstrap support for H3ASK7 as seed ortholog is 100%.
Bootstrap support for A3LV76 as seed ortholog is 100%.

Group of orthologs #1457. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:18 S.stipitis:20

H3AXS7              	100.00%		A3LSN6              	100.00%
Bootstrap support for H3AXS7 as seed ortholog is 71%.
Alternative seed ortholog is H3B355 (18 bits away from this cluster)
Bootstrap support for A3LSN6 as seed ortholog is 74%.
Alternative seed ortholog is P50167 (20 bits away from this cluster)

Group of orthologs #1458. Best score 121 bits
Score difference with first non-orthologous sequence - L.chalumnae:2 S.stipitis:31

H3AXF4              	100.00%		A3LZU7              	100.00%
Bootstrap support for H3AXF4 as seed ortholog is 54%.
Alternative seed ortholog is H3B355 (2 bits away from this cluster)
Bootstrap support for A3LZU7 as seed ortholog is 83%.

Group of orthologs #1459. Best score 120 bits
Score difference with first non-orthologous sequence - L.chalumnae:10 S.stipitis:120

H3BBE0              	100.00%		A3LQY2              	100.00%
H3BF11              	27.82%		
H3BIC8              	24.81%		
H3BF34              	22.56%		
H3ADX5              	20.05%		
H3AEK5              	13.28%		
Bootstrap support for H3BBE0 as seed ortholog is 62%.
Alternative seed ortholog is H3AXY4 (10 bits away from this cluster)
Bootstrap support for A3LQY2 as seed ortholog is 100%.

Group of orthologs #1460. Best score 120 bits
Score difference with first non-orthologous sequence - L.chalumnae:120 S.stipitis:120

H3AEV3              	100.00%		A3GGT0              	100.00%
H3AL96              	52.08%		
H3B623              	43.96%		
Bootstrap support for H3AEV3 as seed ortholog is 100%.
Bootstrap support for A3GGT0 as seed ortholog is 100%.

Group of orthologs #1461. Best score 120 bits
Score difference with first non-orthologous sequence - L.chalumnae:120 S.stipitis:120

H2ZYY6              	100.00%		A3LNH4              	100.00%
H3A5S6              	100.00%		
Bootstrap support for H2ZYY6 as seed ortholog is 100%.
Bootstrap support for H3A5S6 as seed ortholog is 100%.
Bootstrap support for A3LNH4 as seed ortholog is 100%.

Group of orthologs #1462. Best score 120 bits
Score difference with first non-orthologous sequence - L.chalumnae:120 S.stipitis:120

H3ABR9              	100.00%		A3GFL2              	100.00%
H3A3N3              	96.52%		
Bootstrap support for H3ABR9 as seed ortholog is 100%.
Bootstrap support for A3GFL2 as seed ortholog is 100%.

Group of orthologs #1463. Best score 120 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 S.stipitis:120

H3AP64              	100.00%		A3LQC3              	100.00%
H3B7K1              	25.93%		
Bootstrap support for H3AP64 as seed ortholog is 99%.
Bootstrap support for A3LQC3 as seed ortholog is 100%.

Group of orthologs #1464. Best score 120 bits
Score difference with first non-orthologous sequence - L.chalumnae:120 S.stipitis:120

H3AEJ9              	100.00%		A3LWH8              	100.00%
Bootstrap support for H3AEJ9 as seed ortholog is 100%.
Bootstrap support for A3LWH8 as seed ortholog is 100%.

Group of orthologs #1465. Best score 120 bits
Score difference with first non-orthologous sequence - L.chalumnae:120 S.stipitis:120

H3ALW7              	100.00%		A3LTC9              	100.00%
Bootstrap support for H3ALW7 as seed ortholog is 100%.
Bootstrap support for A3LTC9 as seed ortholog is 100%.

Group of orthologs #1466. Best score 120 bits
Score difference with first non-orthologous sequence - L.chalumnae:120 S.stipitis:120

H3AMM8              	100.00%		A3LYD6              	100.00%
Bootstrap support for H3AMM8 as seed ortholog is 100%.
Bootstrap support for A3LYD6 as seed ortholog is 100%.

Group of orthologs #1467. Best score 120 bits
Score difference with first non-orthologous sequence - L.chalumnae:120 S.stipitis:120

H3BDY9              	100.00%		A3LRP8              	100.00%
Bootstrap support for H3BDY9 as seed ortholog is 100%.
Bootstrap support for A3LRP8 as seed ortholog is 100%.

Group of orthologs #1468. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 S.stipitis:119

H3ABY4              	100.00%		A3LQJ6              	100.00%
H3BBN2              	61.91%		A3LZP0              	85.31%
H3ATQ8              	57.43%		A3LPQ4              	37.93%
H3AE46              	26.18%		A3LUM2              	24.52%
H3ABV4              	24.65%		A3GGF8              	21.84%
H3ACA2              	17.81%		
H3ASF4              	16.86%		
M3XGH9              	14.39%		
H3AZL0              	9.32%		
Bootstrap support for H3ABY4 as seed ortholog is 100%.
Bootstrap support for A3LQJ6 as seed ortholog is 100%.

Group of orthologs #1469. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 S.stipitis:119

H3AMW2              	100.00%		A3LQ63              	100.00%
H3BFI8              	81.86%		
H3AC31              	11.46%		
H3ASN1              	5.73%		
Bootstrap support for H3AMW2 as seed ortholog is 100%.
Bootstrap support for A3LQ63 as seed ortholog is 100%.

Group of orthologs #1470. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 S.stipitis:119

H3AB03              	100.00%		A3GHH7              	100.00%
                    	       		A3LSH5              	28.74%
Bootstrap support for H3AB03 as seed ortholog is 100%.
Bootstrap support for A3GHH7 as seed ortholog is 100%.

Group of orthologs #1471. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 S.stipitis:119

H3AJN6              	100.00%		A3GG25              	100.00%
                    	       		A3LZD9              	21.39%
Bootstrap support for H3AJN6 as seed ortholog is 100%.
Bootstrap support for A3GG25 as seed ortholog is 100%.

Group of orthologs #1472. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:8 S.stipitis:22

H3B0J0              	100.00%		A3LPQ2              	100.00%
H3BDK4              	81.28%		
Bootstrap support for H3B0J0 as seed ortholog is 56%.
Alternative seed ortholog is H3B186 (8 bits away from this cluster)
Bootstrap support for A3LPQ2 as seed ortholog is 72%.
Alternative seed ortholog is A3M029 (22 bits away from this cluster)

Group of orthologs #1473. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 S.stipitis:47

H3BCY5              	100.00%		A3LSR9              	100.00%
H3B7H9              	68.09%		
Bootstrap support for H3BCY5 as seed ortholog is 100%.
Bootstrap support for A3LSR9 as seed ortholog is 90%.

Group of orthologs #1474. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 S.stipitis:119

H3AVF5              	100.00%		A3LWS1              	100.00%
Bootstrap support for H3AVF5 as seed ortholog is 100%.
Bootstrap support for A3LWS1 as seed ortholog is 100%.

Group of orthologs #1475. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 S.stipitis:119

H3BC27              	100.00%		A3GH29              	100.00%
Bootstrap support for H3BC27 as seed ortholog is 100%.
Bootstrap support for A3GH29 as seed ortholog is 100%.

Group of orthologs #1476. Best score 119 bits
Score difference with first non-orthologous sequence - L.chalumnae:119 S.stipitis:119

H3B740              	100.00%		A3LT89              	100.00%
Bootstrap support for H3B740 as seed ortholog is 100%.
Bootstrap support for A3LT89 as seed ortholog is 100%.

Group of orthologs #1477. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:26 S.stipitis:43

H3B7K5              	100.00%		A3LS01              	100.00%
H3B0V4              	5.97%		A3LSP0              	60.58%
H3AI64              	5.75%		
Bootstrap support for H3B7K5 as seed ortholog is 74%.
Alternative seed ortholog is H3BF84 (26 bits away from this cluster)
Bootstrap support for A3LS01 as seed ortholog is 81%.

Group of orthologs #1478. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 S.stipitis:118

H3BDA3              	100.00%		A3GG27              	100.00%
H3B5R9              	24.89%		
Bootstrap support for H3BDA3 as seed ortholog is 99%.
Bootstrap support for A3GG27 as seed ortholog is 100%.

Group of orthologs #1479. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:118 S.stipitis:118

H3B8P1              	100.00%		A3LRT4              	100.00%
M3XI03              	52.45%		
Bootstrap support for H3B8P1 as seed ortholog is 100%.
Bootstrap support for A3LRT4 as seed ortholog is 100%.

Group of orthologs #1480. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:118 S.stipitis:118

H3AA97              	100.00%		A3GFJ8              	100.00%
Bootstrap support for H3AA97 as seed ortholog is 100%.
Bootstrap support for A3GFJ8 as seed ortholog is 100%.

Group of orthologs #1481. Best score 118 bits
Score difference with first non-orthologous sequence - L.chalumnae:118 S.stipitis:118

H3AKI6              	100.00%		A3LUG9              	100.00%
Bootstrap support for H3AKI6 as seed ortholog is 100%.
Bootstrap support for A3LUG9 as seed ortholog is 100%.

Group of orthologs #1482. Best score 117 bits
Score difference with first non-orthologous sequence - L.chalumnae:117 S.stipitis:117

H3AY61              	100.00%		A3GHH4              	100.00%
H3AFA3              	39.12%		A3LQH6              	100.00%
Bootstrap support for H3AY61 as seed ortholog is 100%.
Bootstrap support for A3GHH4 as seed ortholog is 100%.
Bootstrap support for A3LQH6 as seed ortholog is 100%.

Group of orthologs #1483. Best score 117 bits
Score difference with first non-orthologous sequence - L.chalumnae:117 S.stipitis:117

H3A3G0              	100.00%		A3LNC6              	100.00%
H3B7Y4              	68.16%		
Bootstrap support for H3A3G0 as seed ortholog is 100%.
Bootstrap support for A3LNC6 as seed ortholog is 100%.

Group of orthologs #1484. Best score 117 bits
Score difference with first non-orthologous sequence - L.chalumnae:117 S.stipitis:117

H3AE86              	100.00%		A3LVF0              	100.00%
H3B110              	50.77%		
Bootstrap support for H3AE86 as seed ortholog is 100%.
Bootstrap support for A3LVF0 as seed ortholog is 100%.

Group of orthologs #1485. Best score 117 bits
Score difference with first non-orthologous sequence - L.chalumnae:117 S.stipitis:117

H3ABJ5              	100.00%		A3LUI4              	100.00%
Bootstrap support for H3ABJ5 as seed ortholog is 100%.
Bootstrap support for A3LUI4 as seed ortholog is 100%.

Group of orthologs #1486. Best score 117 bits
Score difference with first non-orthologous sequence - L.chalumnae:117 S.stipitis:117

H3BI49              	100.00%		A3LZL6              	100.00%
Bootstrap support for H3BI49 as seed ortholog is 100%.
Bootstrap support for A3LZL6 as seed ortholog is 100%.

Group of orthologs #1487. Best score 116 bits
Score difference with first non-orthologous sequence - L.chalumnae:40 S.stipitis:116

H3A8K9              	100.00%		A3LNU6              	100.00%
Bootstrap support for H3A8K9 as seed ortholog is 97%.
Bootstrap support for A3LNU6 as seed ortholog is 100%.

Group of orthologs #1488. Best score 116 bits
Score difference with first non-orthologous sequence - L.chalumnae:116 S.stipitis:116

H3AK60              	100.00%		A3GH16              	100.00%
Bootstrap support for H3AK60 as seed ortholog is 100%.
Bootstrap support for A3GH16 as seed ortholog is 100%.

Group of orthologs #1489. Best score 116 bits
Score difference with first non-orthologous sequence - L.chalumnae:116 S.stipitis:61

H3AT96              	100.00%		A3LNL5              	100.00%
Bootstrap support for H3AT96 as seed ortholog is 100%.
Bootstrap support for A3LNL5 as seed ortholog is 95%.

Group of orthologs #1490. Best score 116 bits
Score difference with first non-orthologous sequence - L.chalumnae:116 S.stipitis:116

H3AKA6              	100.00%		A3LYI7              	100.00%
Bootstrap support for H3AKA6 as seed ortholog is 100%.
Bootstrap support for A3LYI7 as seed ortholog is 100%.

Group of orthologs #1491. Best score 116 bits
Score difference with first non-orthologous sequence - L.chalumnae:116 S.stipitis:116

H3ANL2              	100.00%		A3LYG5              	100.00%
Bootstrap support for H3ANL2 as seed ortholog is 100%.
Bootstrap support for A3LYG5 as seed ortholog is 100%.

Group of orthologs #1492. Best score 116 bits
Score difference with first non-orthologous sequence - L.chalumnae:116 S.stipitis:116

H3B6G4              	100.00%		A3LNH9              	100.00%
Bootstrap support for H3B6G4 as seed ortholog is 100%.
Bootstrap support for A3LNH9 as seed ortholog is 100%.

Group of orthologs #1493. Best score 116 bits
Score difference with first non-orthologous sequence - L.chalumnae:116 S.stipitis:116

H3B904              	100.00%		A3LN20              	100.00%
Bootstrap support for H3B904 as seed ortholog is 100%.
Bootstrap support for A3LN20 as seed ortholog is 100%.

Group of orthologs #1494. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 S.stipitis:115

H3AFU9              	100.00%		A3LQU0              	100.00%
H3AXZ0              	36.96%		
H3A318              	8.45%		
M3XJS5              	6.28%		
Bootstrap support for H3AFU9 as seed ortholog is 100%.
Bootstrap support for A3LQU0 as seed ortholog is 100%.

Group of orthologs #1495. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:27 S.stipitis:115

H3AIN3              	100.00%		A3LXI5              	100.00%
H3B920              	34.95%		
H3B259              	18.31%		
Bootstrap support for H3AIN3 as seed ortholog is 81%.
Bootstrap support for A3LXI5 as seed ortholog is 100%.

Group of orthologs #1496. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:29 S.stipitis:115

H3AAV3              	100.00%		A3LQL8              	100.00%
M3XIP7              	43.54%		
Bootstrap support for H3AAV3 as seed ortholog is 85%.
Bootstrap support for A3LQL8 as seed ortholog is 100%.

Group of orthologs #1497. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 S.stipitis:115

M3XK98              	100.00%		A3GH88              	100.00%
                    	       		A3GHQ6              	31.46%
Bootstrap support for M3XK98 as seed ortholog is 99%.
Bootstrap support for A3GH88 as seed ortholog is 100%.

Group of orthologs #1498. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 S.stipitis:115

M3XJF6              	100.00%		A3LV36              	100.00%
                    	       		A3GFS4              	12.25%
Bootstrap support for M3XJF6 as seed ortholog is 100%.
Bootstrap support for A3LV36 as seed ortholog is 100%.

Group of orthologs #1499. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 S.stipitis:115

H2ZZA9              	100.00%		A3LR14              	100.00%
Bootstrap support for H2ZZA9 as seed ortholog is 100%.
Bootstrap support for A3LR14 as seed ortholog is 100%.

Group of orthologs #1500. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 S.stipitis:18

H3A4N1              	100.00%		A3GHI2              	100.00%
Bootstrap support for H3A4N1 as seed ortholog is 96%.
Bootstrap support for A3GHI2 as seed ortholog is 73%.
Alternative seed ortholog is A3LSC5 (18 bits away from this cluster)

Group of orthologs #1501. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 S.stipitis:115

H3BET6              	100.00%		A3LT87              	100.00%
Bootstrap support for H3BET6 as seed ortholog is 100%.
Bootstrap support for A3LT87 as seed ortholog is 100%.

Group of orthologs #1502. Best score 115 bits
Score difference with first non-orthologous sequence - L.chalumnae:115 S.stipitis:115

H3BCD5              	100.00%		A3LY64              	100.00%
Bootstrap support for H3BCD5 as seed ortholog is 100%.
Bootstrap support for A3LY64 as seed ortholog is 100%.

Group of orthologs #1503. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 S.stipitis:65

H3ALI2              	100.00%		A3LW44              	100.00%
H3AMB4              	100.00%		A3LU21              	100.00%
                    	       		A3GG78              	88.76%
                    	       		A3GH10              	86.71%
                    	       		A3GGR3              	75.98%
Bootstrap support for H3ALI2 as seed ortholog is 93%.
Bootstrap support for H3AMB4 as seed ortholog is 93%.
Bootstrap support for A3LW44 as seed ortholog is 95%.
Bootstrap support for A3LU21 as seed ortholog is 97%.

Group of orthologs #1504. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 S.stipitis:13

H3AJ74              	100.00%		A3LNL9              	100.00%
M3XI98              	10.54%		
H3AX46              	6.97%		
I6L4Q1              	5.78%		
H2ZX94              	5.10%		
Bootstrap support for H3AJ74 as seed ortholog is 100%.
Bootstrap support for A3LNL9 as seed ortholog is 68%.
Alternative seed ortholog is A3GFG2 (13 bits away from this cluster)

Group of orthologs #1505. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 S.stipitis:58

H3AGF9              	100.00%		A3LZR4              	100.00%
H3A7Z2              	49.13%		
H3A362              	19.38%		
Bootstrap support for H3AGF9 as seed ortholog is 100%.
Bootstrap support for A3LZR4 as seed ortholog is 97%.

Group of orthologs #1506. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 S.stipitis:114

H3AC34              	100.00%		A3LPE3              	100.00%
H3BF37              	59.26%		
Bootstrap support for H3AC34 as seed ortholog is 100%.
Bootstrap support for A3LPE3 as seed ortholog is 100%.

Group of orthologs #1507. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 S.stipitis:114

H3A825              	100.00%		A3LWJ0              	100.00%
H3BGD2              	67.95%		
Bootstrap support for H3A825 as seed ortholog is 100%.
Bootstrap support for A3LWJ0 as seed ortholog is 100%.

Group of orthologs #1508. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 S.stipitis:114

H3AQ09              	100.00%		A3GHM6              	100.00%
H3ABM0              	42.58%		
Bootstrap support for H3AQ09 as seed ortholog is 91%.
Bootstrap support for A3GHM6 as seed ortholog is 100%.

Group of orthologs #1509. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 S.stipitis:114

H3AX58              	100.00%		A3LNE7              	100.00%
M3XII1              	28.02%		
Bootstrap support for H3AX58 as seed ortholog is 100%.
Bootstrap support for A3LNE7 as seed ortholog is 100%.

Group of orthologs #1510. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 S.stipitis:114

H2ZVF3              	100.00%		A3M0A0              	100.00%
Bootstrap support for H2ZVF3 as seed ortholog is 100%.
Bootstrap support for A3M0A0 as seed ortholog is 100%.

Group of orthologs #1511. Best score 114 bits
Score difference with first non-orthologous sequence - L.chalumnae:114 S.stipitis:114

H3BIK0              	100.00%		A3M071              	100.00%
Bootstrap support for H3BIK0 as seed ortholog is 100%.
Bootstrap support for A3M071 as seed ortholog is 100%.

Group of orthologs #1512. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 S.stipitis:113

H3B9P1              	100.00%		A3LS82              	100.00%
H3BG33              	47.06%		
Bootstrap support for H3B9P1 as seed ortholog is 100%.
Bootstrap support for A3LS82 as seed ortholog is 100%.

Group of orthologs #1513. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 S.stipitis:113

H2ZWC2              	100.00%		A3LQL5              	100.00%
Bootstrap support for H2ZWC2 as seed ortholog is 100%.
Bootstrap support for A3LQL5 as seed ortholog is 100%.

Group of orthologs #1514. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 S.stipitis:64

H2ZXI0              	100.00%		A3LTG5              	100.00%
Bootstrap support for H2ZXI0 as seed ortholog is 99%.
Bootstrap support for A3LTG5 as seed ortholog is 99%.

Group of orthologs #1515. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 S.stipitis:113

H3AAY7              	100.00%		A3GHC5              	100.00%
Bootstrap support for H3AAY7 as seed ortholog is 100%.
Bootstrap support for A3GHC5 as seed ortholog is 100%.

Group of orthologs #1516. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 S.stipitis:36

H3ALI6              	100.00%		A3LQN5              	100.00%
Bootstrap support for H3ALI6 as seed ortholog is 100%.
Bootstrap support for A3LQN5 as seed ortholog is 82%.

Group of orthologs #1517. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 S.stipitis:46

H3AS08              	100.00%		A3LTG0              	100.00%
Bootstrap support for H3AS08 as seed ortholog is 100%.
Bootstrap support for A3LTG0 as seed ortholog is 96%.

Group of orthologs #1518. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:113 S.stipitis:113

H3AYZ5              	100.00%		A3LR02              	100.00%
Bootstrap support for H3AYZ5 as seed ortholog is 100%.
Bootstrap support for A3LR02 as seed ortholog is 100%.

Group of orthologs #1519. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 S.stipitis:66

H3AQW6              	100.00%		A3LYJ5              	100.00%
Bootstrap support for H3AQW6 as seed ortholog is 98%.
Bootstrap support for A3LYJ5 as seed ortholog is 98%.

Group of orthologs #1520. Best score 113 bits
Score difference with first non-orthologous sequence - L.chalumnae:32 S.stipitis:113

H3B5T9              	100.00%		A3LTY6              	100.00%
Bootstrap support for H3B5T9 as seed ortholog is 80%.
Bootstrap support for A3LTY6 as seed ortholog is 100%.

Group of orthologs #1521. Best score 112 bits
Score difference with first non-orthologous sequence - L.chalumnae:32 S.stipitis:112

H3ADE3              	100.00%		A3LZV3              	100.00%
H3BDI4              	100.00%		
H3B7B2              	42.91%		
H2ZZ33              	34.89%		
H3B9J8              	16.55%		
H2ZZE8              	16.55%		
H3AA90              	16.55%		
H3AGR5              	7.87%		
Bootstrap support for H3ADE3 as seed ortholog is 73%.
Alternative seed ortholog is H3AV81 (32 bits away from this cluster)
Bootstrap support for H3BDI4 as seed ortholog is 73%.
Alternative seed ortholog is H3AV81 (32 bits away from this cluster)
Bootstrap support for A3LZV3 as seed ortholog is 100%.

Group of orthologs #1522. Best score 112 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 S.stipitis:112

H3ATI3              	100.00%		A3LUI1              	100.00%
H3BHG9              	34.28%		A3GFS9              	38.56%
H2ZWF5              	22.23%		
H3ALB7              	21.25%		
H3AN66              	21.25%		
Bootstrap support for H3ATI3 as seed ortholog is 100%.
Bootstrap support for A3LUI1 as seed ortholog is 100%.

Group of orthologs #1523. Best score 112 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 S.stipitis:112

H3AQH4              	100.00%		A3LZU9              	100.00%
                    	       		A3LQR8              	28.71%
                    	       		A3LSD2              	26.51%
Bootstrap support for H3AQH4 as seed ortholog is 97%.
Bootstrap support for A3LZU9 as seed ortholog is 100%.

Group of orthologs #1524. Best score 112 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 S.stipitis:112

H3BB44              	100.00%		A3GH60              	100.00%
Bootstrap support for H3BB44 as seed ortholog is 100%.
Bootstrap support for A3GH60 as seed ortholog is 100%.

Group of orthologs #1525. Best score 112 bits
Score difference with first non-orthologous sequence - L.chalumnae:112 S.stipitis:112

H3BH28              	100.00%		A3LSE6              	100.00%
Bootstrap support for H3BH28 as seed ortholog is 100%.
Bootstrap support for A3LSE6 as seed ortholog is 100%.

Group of orthologs #1526. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:26 S.stipitis:111

H3APW6              	100.00%		A3GFQ6              	100.00%
H3AYK9              	36.12%		A3LUW2              	100.00%
Bootstrap support for H3APW6 as seed ortholog is 85%.
Bootstrap support for A3GFQ6 as seed ortholog is 100%.
Bootstrap support for A3LUW2 as seed ortholog is 100%.

Group of orthologs #1527. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 S.stipitis:111

H3BDC6              	100.00%		A3GFI1              	100.00%
H3B9R3              	18.33%		A3M0D5              	15.26%
Bootstrap support for H3BDC6 as seed ortholog is 100%.
Bootstrap support for A3GFI1 as seed ortholog is 100%.

Group of orthologs #1528. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 S.stipitis:111

H2ZTG2              	100.00%		A3LVE0              	100.00%
Bootstrap support for H2ZTG2 as seed ortholog is 100%.
Bootstrap support for A3LVE0 as seed ortholog is 100%.

Group of orthologs #1529. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 S.stipitis:111

H3ATG5              	100.00%		A3LWG3              	100.00%
Bootstrap support for H3ATG5 as seed ortholog is 100%.
Bootstrap support for A3LWG3 as seed ortholog is 100%.

Group of orthologs #1530. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 S.stipitis:111

H3AZR4              	100.00%		A3LTT8              	100.00%
Bootstrap support for H3AZR4 as seed ortholog is 100%.
Bootstrap support for A3LTT8 as seed ortholog is 100%.

Group of orthologs #1531. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 S.stipitis:111

H3B1E1              	100.00%		A3LUA1              	100.00%
Bootstrap support for H3B1E1 as seed ortholog is 100%.
Bootstrap support for A3LUA1 as seed ortholog is 100%.

Group of orthologs #1532. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 S.stipitis:111

H3B7Y2              	100.00%		A3LPF4              	100.00%
Bootstrap support for H3B7Y2 as seed ortholog is 99%.
Bootstrap support for A3LPF4 as seed ortholog is 100%.

Group of orthologs #1533. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 S.stipitis:111

H3BD25              	100.00%		A3LQT3              	100.00%
Bootstrap support for H3BD25 as seed ortholog is 100%.
Bootstrap support for A3LQT3 as seed ortholog is 100%.

Group of orthologs #1534. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 S.stipitis:111

H3B5C4              	100.00%		A3M080              	100.00%
Bootstrap support for H3B5C4 as seed ortholog is 100%.
Bootstrap support for A3M080 as seed ortholog is 100%.

Group of orthologs #1535. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 S.stipitis:111

H3BBK5              	100.00%		A3M036              	100.00%
Bootstrap support for H3BBK5 as seed ortholog is 100%.
Bootstrap support for A3M036 as seed ortholog is 100%.

Group of orthologs #1536. Best score 111 bits
Score difference with first non-orthologous sequence - L.chalumnae:111 S.stipitis:111

H3BHG0              	100.00%		A3LYM6              	100.00%
Bootstrap support for H3BHG0 as seed ortholog is 100%.
Bootstrap support for A3LYM6 as seed ortholog is 100%.

Group of orthologs #1537. Best score 110 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 S.stipitis:110

H3A4P4              	100.00%		A3GG90              	100.00%
H3B1U2              	100.00%		A3LS39              	100.00%
H3A9W6              	22.87%		
H2ZTP0              	6.56%		
Bootstrap support for H3A4P4 as seed ortholog is 81%.
Bootstrap support for H3B1U2 as seed ortholog is 81%.
Bootstrap support for A3GG90 as seed ortholog is 100%.
Bootstrap support for A3LS39 as seed ortholog is 100%.

Group of orthologs #1538. Best score 110 bits
Score difference with first non-orthologous sequence - L.chalumnae:32 S.stipitis:110

H3B5E5              	100.00%		A3LSM9              	100.00%
H2ZSM3              	23.63%		A3LSM8              	10.81%
Bootstrap support for H3B5E5 as seed ortholog is 81%.
Bootstrap support for A3LSM9 as seed ortholog is 100%.

Group of orthologs #1539. Best score 110 bits
Score difference with first non-orthologous sequence - L.chalumnae:110 S.stipitis:110

H3A0T0              	100.00%		A3LT60              	100.00%
Bootstrap support for H3A0T0 as seed ortholog is 100%.
Bootstrap support for A3LT60 as seed ortholog is 100%.

Group of orthologs #1540. Best score 110 bits
Score difference with first non-orthologous sequence - L.chalumnae:11 S.stipitis:110

H3A3S9              	100.00%		A3LZI3              	100.00%
Bootstrap support for H3A3S9 as seed ortholog is 76%.
Bootstrap support for A3LZI3 as seed ortholog is 100%.

Group of orthologs #1541. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 S.stipitis:109

H3BGY7              	100.00%		A3GHM2              	100.00%
H3A4X3              	61.38%		A3LU22              	52.21%
H3BHM5              	50.00%		
H2ZZF6              	39.51%		
H3A034              	18.08%		
H3B2I3              	11.16%		
H3AGQ3              	10.49%		
Bootstrap support for H3BGY7 as seed ortholog is 100%.
Bootstrap support for A3GHM2 as seed ortholog is 100%.

Group of orthologs #1542. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 S.stipitis:109

H3A759              	100.00%		A3LTV7              	100.00%
H3BGT0              	44.44%		
Bootstrap support for H3A759 as seed ortholog is 100%.
Bootstrap support for A3LTV7 as seed ortholog is 100%.

Group of orthologs #1543. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 S.stipitis:109

H3AGB8              	100.00%		A3LTT9              	100.00%
H2ZVX0              	43.46%		
Bootstrap support for H3AGB8 as seed ortholog is 100%.
Bootstrap support for A3LTT9 as seed ortholog is 100%.

Group of orthologs #1544. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 S.stipitis:109

H3AH94              	100.00%		A3GF23              	100.00%
Bootstrap support for H3AH94 as seed ortholog is 100%.
Bootstrap support for A3GF23 as seed ortholog is 100%.

Group of orthologs #1545. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 S.stipitis:109

H3AVX1              	100.00%		A3LT61              	100.00%
Bootstrap support for H3AVX1 as seed ortholog is 100%.
Bootstrap support for A3LT61 as seed ortholog is 100%.

Group of orthologs #1546. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 S.stipitis:109

H3BDL8              	100.00%		A3GGI8              	100.00%
Bootstrap support for H3BDL8 as seed ortholog is 100%.
Bootstrap support for A3GGI8 as seed ortholog is 100%.

Group of orthologs #1547. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 S.stipitis:109

H3BG60              	100.00%		A3GFM7              	100.00%
Bootstrap support for H3BG60 as seed ortholog is 100%.
Bootstrap support for A3GFM7 as seed ortholog is 100%.

Group of orthologs #1548. Best score 109 bits
Score difference with first non-orthologous sequence - L.chalumnae:109 S.stipitis:109

H3B8U8              	100.00%		A3LS40              	100.00%
Bootstrap support for H3B8U8 as seed ortholog is 100%.
Bootstrap support for A3LS40 as seed ortholog is 100%.

Group of orthologs #1549. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 S.stipitis:108

H3A7I8              	100.00%		A3LWB7              	100.00%
H3AV41              	56.36%		
Bootstrap support for H3A7I8 as seed ortholog is 100%.
Bootstrap support for A3LWB7 as seed ortholog is 100%.

Group of orthologs #1550. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 S.stipitis:108

H3ABW4              	100.00%		A3LXN2              	100.00%
H3B3B5              	58.28%		
Bootstrap support for H3ABW4 as seed ortholog is 100%.
Bootstrap support for A3LXN2 as seed ortholog is 100%.

Group of orthologs #1551. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 S.stipitis:108

H3BCF9              	100.00%		A3LTX2              	100.00%
H3AS61              	12.89%		
Bootstrap support for H3BCF9 as seed ortholog is 100%.
Bootstrap support for A3LTX2 as seed ortholog is 100%.

Group of orthologs #1552. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 S.stipitis:10

H2ZY23              	100.00%		A3GI91              	100.00%
Bootstrap support for H2ZY23 as seed ortholog is 100%.
Bootstrap support for A3GI91 as seed ortholog is 67%.
Alternative seed ortholog is A3GG43 (10 bits away from this cluster)

Group of orthologs #1553. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 S.stipitis:108

H3ATS7              	100.00%		A3GFM9              	100.00%
Bootstrap support for H3ATS7 as seed ortholog is 100%.
Bootstrap support for A3GFM9 as seed ortholog is 100%.

Group of orthologs #1554. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:31 S.stipitis:108

H3B1A8              	100.00%		A3GHV4              	100.00%
Bootstrap support for H3B1A8 as seed ortholog is 95%.
Bootstrap support for A3GHV4 as seed ortholog is 100%.

Group of orthologs #1555. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 S.stipitis:108

H3B3V8              	100.00%		A3LR30              	100.00%
Bootstrap support for H3B3V8 as seed ortholog is 100%.
Bootstrap support for A3LR30 as seed ortholog is 100%.

Group of orthologs #1556. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:108 S.stipitis:108

H3B549              	100.00%		A3LQ39              	100.00%
Bootstrap support for H3B549 as seed ortholog is 100%.
Bootstrap support for A3LQ39 as seed ortholog is 100%.

Group of orthologs #1557. Best score 108 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 S.stipitis:108

H3BFR6              	100.00%		A3LN47              	100.00%
Bootstrap support for H3BFR6 as seed ortholog is 99%.
Bootstrap support for A3LN47 as seed ortholog is 100%.

Group of orthologs #1558. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 S.stipitis:107

H3ADG6              	100.00%		A3LQW8              	100.00%
Bootstrap support for H3ADG6 as seed ortholog is 100%.
Bootstrap support for A3LQW8 as seed ortholog is 100%.

Group of orthologs #1559. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 S.stipitis:107

H3AEW2              	100.00%		A3LTT1              	100.00%
Bootstrap support for H3AEW2 as seed ortholog is 100%.
Bootstrap support for A3LTT1 as seed ortholog is 100%.

Group of orthologs #1560. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 S.stipitis:107

H3ASL8              	100.00%		A3LNQ9              	100.00%
Bootstrap support for H3ASL8 as seed ortholog is 100%.
Bootstrap support for A3LNQ9 as seed ortholog is 100%.

Group of orthologs #1561. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 S.stipitis:107

H3BCR1              	100.00%		A3LN22              	100.00%
Bootstrap support for H3BCR1 as seed ortholog is 100%.
Bootstrap support for A3LN22 as seed ortholog is 100%.

Group of orthologs #1562. Best score 107 bits
Score difference with first non-orthologous sequence - L.chalumnae:107 S.stipitis:107

H3B311              	100.00%		A3LYB6              	100.00%
Bootstrap support for H3B311 as seed ortholog is 100%.
Bootstrap support for A3LYB6 as seed ortholog is 100%.

Group of orthologs #1563. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:16 S.stipitis:36

H3B1X8              	100.00%		A3GGB2              	100.00%
M3XJ65              	100.00%		A3GGB1              	100.00%
H3A3Y3              	49.13%		
H3B8R5              	44.08%		
H3AAG7              	31.36%		
Bootstrap support for H3B1X8 as seed ortholog is 73%.
Alternative seed ortholog is H3B6E9 (16 bits away from this cluster)
Bootstrap support for M3XJ65 as seed ortholog is 62%.
Alternative seed ortholog is H3B6E9 (16 bits away from this cluster)
Bootstrap support for A3GGB2 as seed ortholog is 88%.
Bootstrap support for A3GGB1 as seed ortholog is 64%.
Alternative seed ortholog is A3LXB1 (36 bits away from this cluster)

Group of orthologs #1564. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 S.stipitis:31

H3AE52              	100.00%		A3LU11              	100.00%
                    	       		A3LWA4              	17.20%
Bootstrap support for H3AE52 as seed ortholog is 100%.
Bootstrap support for A3LU11 as seed ortholog is 71%.
Alternative seed ortholog is A3LNV8 (31 bits away from this cluster)

Group of orthologs #1565. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 S.stipitis:106

H3AX14              	100.00%		A3M0E2              	100.00%
M3XLN5              	47.84%		
Bootstrap support for H3AX14 as seed ortholog is 100%.
Bootstrap support for A3M0E2 as seed ortholog is 100%.

Group of orthologs #1566. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 S.stipitis:106

H3A3Y7              	100.00%		A3LX84              	100.00%
Bootstrap support for H3A3Y7 as seed ortholog is 100%.
Bootstrap support for A3LX84 as seed ortholog is 100%.

Group of orthologs #1567. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 S.stipitis:106

H3AIG9              	100.00%		A3GIB0              	100.00%
Bootstrap support for H3AIG9 as seed ortholog is 100%.
Bootstrap support for A3GIB0 as seed ortholog is 100%.

Group of orthologs #1568. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 S.stipitis:106

H3AMG5              	100.00%		A3LPL9              	100.00%
Bootstrap support for H3AMG5 as seed ortholog is 100%.
Bootstrap support for A3LPL9 as seed ortholog is 100%.

Group of orthologs #1569. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 S.stipitis:106

H3B923              	100.00%		A3GG65              	100.00%
Bootstrap support for H3B923 as seed ortholog is 100%.
Bootstrap support for A3GG65 as seed ortholog is 100%.

Group of orthologs #1570. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 S.stipitis:106

H3B0T9              	100.00%		A3LWW0              	100.00%
Bootstrap support for H3B0T9 as seed ortholog is 100%.
Bootstrap support for A3LWW0 as seed ortholog is 100%.

Group of orthologs #1571. Best score 106 bits
Score difference with first non-orthologous sequence - L.chalumnae:106 S.stipitis:106

H3B9R6              	100.00%		A3LX04              	100.00%
Bootstrap support for H3B9R6 as seed ortholog is 100%.
Bootstrap support for A3LX04 as seed ortholog is 100%.

Group of orthologs #1572. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 S.stipitis:105

H3A7G1              	100.00%		A3GHR2              	100.00%
H3AQN7              	100.00%		
H3AHI0              	23.15%		
Bootstrap support for H3A7G1 as seed ortholog is 100%.
Bootstrap support for H3AQN7 as seed ortholog is 100%.
Bootstrap support for A3GHR2 as seed ortholog is 100%.

Group of orthologs #1573. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 S.stipitis:105

H3BEG2              	100.00%		A3LYF9              	100.00%
H3AUM2              	67.54%		A3GHN7              	8.11%
Bootstrap support for H3BEG2 as seed ortholog is 100%.
Bootstrap support for A3LYF9 as seed ortholog is 100%.

Group of orthologs #1574. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 S.stipitis:105

H3ACP4              	100.00%		A3LTQ6              	100.00%
H3ANU1              	27.81%		
Bootstrap support for H3ACP4 as seed ortholog is 100%.
Bootstrap support for A3LTQ6 as seed ortholog is 100%.

Group of orthologs #1575. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 S.stipitis:105

H3A2M2              	100.00%		A3LU86              	100.00%
Bootstrap support for H3A2M2 as seed ortholog is 100%.
Bootstrap support for A3LU86 as seed ortholog is 100%.

Group of orthologs #1576. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:105 S.stipitis:105

H2ZYI2              	100.00%		A3M0C9              	100.00%
Bootstrap support for H2ZYI2 as seed ortholog is 100%.
Bootstrap support for A3M0C9 as seed ortholog is 100%.

Group of orthologs #1577. Best score 105 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 S.stipitis:105

H3ATJ1              	100.00%		A3LXV2              	100.00%
Bootstrap support for H3ATJ1 as seed ortholog is 99%.
Bootstrap support for A3LXV2 as seed ortholog is 100%.

Group of orthologs #1578. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:33 S.stipitis:53

H3A021              	100.00%		A3GHL5              	100.00%
H3A7N1              	100.00%		A3LPI1              	100.00%
H3A8L2              	100.00%		A3LZX3              	100.00%
H3BHI8              	41.99%		
H3B8V5              	32.74%		
H3B9K3              	16.83%		
H3B9T6              	16.55%		
H2ZZ09              	16.28%		
H3AT35              	15.71%		
Bootstrap support for H3A021 as seed ortholog is 86%.
Bootstrap support for H3A7N1 as seed ortholog is 67%.
Alternative seed ortholog is H3B6E9 (33 bits away from this cluster)
Bootstrap support for H3A8L2 as seed ortholog is 69%.
Alternative seed ortholog is H3B6E9 (33 bits away from this cluster)
Bootstrap support for A3GHL5 as seed ortholog is 97%.
Bootstrap support for A3LPI1 as seed ortholog is 73%.
Alternative seed ortholog is A3LXB1 (53 bits away from this cluster)
Bootstrap support for A3LZX3 as seed ortholog is 75%.

Group of orthologs #1579. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 S.stipitis:104

H3B9V6              	100.00%		A3GHJ0              	100.00%
H3AZU1              	63.84%		
H3BAT0              	46.99%		
H3ALD2              	42.19%		
Bootstrap support for H3B9V6 as seed ortholog is 100%.
Bootstrap support for A3GHJ0 as seed ortholog is 100%.

Group of orthologs #1580. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 S.stipitis:104

H3BHC6              	100.00%		A3LRJ2              	100.00%
H3B3B1              	70.04%		
H3B3W6              	68.02%		
Bootstrap support for H3BHC6 as seed ortholog is 100%.
Bootstrap support for A3LRJ2 as seed ortholog is 100%.

Group of orthologs #1581. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:25 S.stipitis:104

H3A4K3              	100.00%		A3LYC6              	100.00%
H3APJ2              	48.55%		
Bootstrap support for H3A4K3 as seed ortholog is 71%.
Alternative seed ortholog is H2ZUC1 (25 bits away from this cluster)
Bootstrap support for A3LYC6 as seed ortholog is 100%.

Group of orthologs #1582. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 S.stipitis:104

H3AT15              	100.00%		A3LSV7              	100.00%
H3AAF7              	17.74%		
Bootstrap support for H3AT15 as seed ortholog is 100%.
Bootstrap support for A3LSV7 as seed ortholog is 100%.

Group of orthologs #1583. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 S.stipitis:104

H3B6X7              	100.00%		A3LVJ2              	100.00%
                    	       		A3LVG5              	13.16%
Bootstrap support for H3B6X7 as seed ortholog is 100%.
Bootstrap support for A3LVJ2 as seed ortholog is 100%.

Group of orthologs #1584. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 S.stipitis:104

H3A6Y7              	100.00%		A3GID0              	100.00%
Bootstrap support for H3A6Y7 as seed ortholog is 97%.
Bootstrap support for A3GID0 as seed ortholog is 100%.

Group of orthologs #1585. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 S.stipitis:104

H3A4M9              	100.00%		A3LT51              	100.00%
Bootstrap support for H3A4M9 as seed ortholog is 100%.
Bootstrap support for A3LT51 as seed ortholog is 100%.

Group of orthologs #1586. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 S.stipitis:104

H3AAF0              	100.00%		A3LY40              	100.00%
Bootstrap support for H3AAF0 as seed ortholog is 100%.
Bootstrap support for A3LY40 as seed ortholog is 100%.

Group of orthologs #1587. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:104 S.stipitis:104

H3ALW1              	100.00%		A3LXN3              	100.00%
Bootstrap support for H3ALW1 as seed ortholog is 100%.
Bootstrap support for A3LXN3 as seed ortholog is 100%.

Group of orthologs #1588. Best score 104 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 S.stipitis:55

H3B7F4              	100.00%		A3LVG0              	100.00%
Bootstrap support for H3B7F4 as seed ortholog is 99%.
Bootstrap support for A3LVG0 as seed ortholog is 99%.

Group of orthologs #1589. Best score 103 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 S.stipitis:55

H3AA52              	100.00%		A3LVV3              	100.00%
H3AIM6              	58.03%		
Bootstrap support for H3AA52 as seed ortholog is 100%.
Bootstrap support for A3LVV3 as seed ortholog is 97%.

Group of orthologs #1590. Best score 103 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 S.stipitis:103

H3A9L9              	100.00%		A3GI53              	100.00%
Bootstrap support for H3A9L9 as seed ortholog is 100%.
Bootstrap support for A3GI53 as seed ortholog is 100%.

Group of orthologs #1591. Best score 103 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 S.stipitis:103

H3ABN6              	100.00%		A3GHR8              	100.00%
Bootstrap support for H3ABN6 as seed ortholog is 100%.
Bootstrap support for A3GHR8 as seed ortholog is 100%.

Group of orthologs #1592. Best score 103 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 S.stipitis:103

H3BFR2              	100.00%		A3GF33              	100.00%
Bootstrap support for H3BFR2 as seed ortholog is 100%.
Bootstrap support for A3GF33 as seed ortholog is 100%.

Group of orthologs #1593. Best score 103 bits
Score difference with first non-orthologous sequence - L.chalumnae:103 S.stipitis:103

H3BCF6              	100.00%		A3LQX9              	100.00%
Bootstrap support for H3BCF6 as seed ortholog is 100%.
Bootstrap support for A3LQX9 as seed ortholog is 100%.

Group of orthologs #1594. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 S.stipitis:102

H3B4N4              	100.00%		A3LZM0              	100.00%
H3ABK2              	66.67%		
Bootstrap support for H3B4N4 as seed ortholog is 100%.
Bootstrap support for A3LZM0 as seed ortholog is 100%.

Group of orthologs #1595. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 S.stipitis:102

H3BFE6              	100.00%		A3M0A2              	100.00%
H3BG75              	30.38%		
Bootstrap support for H3BFE6 as seed ortholog is 100%.
Bootstrap support for A3M0A2 as seed ortholog is 100%.

Group of orthologs #1596. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 S.stipitis:102

H3ACJ4              	100.00%		A3LVT7              	100.00%
Bootstrap support for H3ACJ4 as seed ortholog is 100%.
Bootstrap support for A3LVT7 as seed ortholog is 100%.

Group of orthologs #1597. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 S.stipitis:102

H3AJ25              	100.00%		A3LZ32              	100.00%
Bootstrap support for H3AJ25 as seed ortholog is 100%.
Bootstrap support for A3LZ32 as seed ortholog is 100%.

Group of orthologs #1598. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 S.stipitis:102

H3B267              	100.00%		A3GFJ3              	100.00%
Bootstrap support for H3B267 as seed ortholog is 100%.
Bootstrap support for A3GFJ3 as seed ortholog is 100%.

Group of orthologs #1599. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 S.stipitis:102

H3B9L3              	100.00%		A3LNS8              	100.00%
Bootstrap support for H3B9L3 as seed ortholog is 100%.
Bootstrap support for A3LNS8 as seed ortholog is 100%.

Group of orthologs #1600. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 S.stipitis:102

M3XJB8              	100.00%		A3GEY6              	100.00%
Bootstrap support for M3XJB8 as seed ortholog is 100%.
Bootstrap support for A3GEY6 as seed ortholog is 100%.

Group of orthologs #1601. Best score 102 bits
Score difference with first non-orthologous sequence - L.chalumnae:102 S.stipitis:102

H3BIM0              	100.00%		A3LRR2              	100.00%
Bootstrap support for H3BIM0 as seed ortholog is 100%.
Bootstrap support for A3LRR2 as seed ortholog is 100%.

Group of orthologs #1602. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:17 S.stipitis:101

H2ZVA4              	100.00%		A3LVQ6              	100.00%
H3B735              	46.72%		
M3XKT8              	45.71%		
H3ARW5              	45.45%		
H3ATK1              	45.33%		
H2ZZ53              	44.44%		
H2ZSS0              	44.07%		
H3A4Z1              	42.68%		
H2ZTT3              	38.76%		
H3A372              	38.13%		
M3XHS9              	38.13%		
M3XJ70              	37.63%		
M3XJR9              	36.99%		
H3AGP2              	36.62%		
M3XKG1              	36.62%		
M3XJZ2              	36.36%		
H2ZY67              	33.08%		
H3B1D2              	31.31%		
M3XKP1              	26.64%		
H3A228              	23.11%		
H3AMT8              	22.98%		
H2ZUC7              	21.59%		
M3XHD7              	19.44%		
H3AAC3              	18.31%		
H3AF39              	18.18%		
H3ALA8              	18.06%		
H3AK65              	17.30%		
H3A8F9              	16.29%		
H3AD04              	16.29%		
H3AKQ1              	14.39%		
H3AA60              	11.62%		
H3AB94              	10.35%		
H3ARD7              	10.23%		
H3AJJ5              	6.19%		
H3AGM1              	5.93%		
Bootstrap support for H2ZVA4 as seed ortholog is 78%.
Bootstrap support for A3LVQ6 as seed ortholog is 100%.

Group of orthologs #1603. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 S.stipitis:101

H3A829              	100.00%		A3LYY2              	100.00%
H3B130              	23.57%		
H3AYZ9              	19.46%		
H3AD76              	9.73%		
Bootstrap support for H3A829 as seed ortholog is 100%.
Bootstrap support for A3LYY2 as seed ortholog is 100%.

Group of orthologs #1604. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 S.stipitis:101

H3BEW8              	100.00%		A3LXR0              	100.00%
H3B4E6              	72.62%		
H3A074              	40.48%		
Bootstrap support for H3BEW8 as seed ortholog is 100%.
Bootstrap support for A3LXR0 as seed ortholog is 100%.

Group of orthologs #1605. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 S.stipitis:101

H3AJN5              	100.00%		A3LPN8              	100.00%
H3ACX3              	12.09%		
Bootstrap support for H3AJN5 as seed ortholog is 100%.
Bootstrap support for A3LPN8 as seed ortholog is 100%.

Group of orthologs #1606. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 S.stipitis:101

H3B2P0              	100.00%		A3LPD0              	100.00%
H3AJZ2              	52.77%		
Bootstrap support for H3B2P0 as seed ortholog is 100%.
Bootstrap support for A3LPD0 as seed ortholog is 100%.

Group of orthologs #1607. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 S.stipitis:101

H3B3P2              	100.00%		A3LTF6              	100.00%
M3XKM1              	32.92%		
Bootstrap support for H3B3P2 as seed ortholog is 100%.
Bootstrap support for A3LTF6 as seed ortholog is 100%.

Group of orthologs #1608. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 S.stipitis:101

H2ZXT8              	100.00%		A3GFG1              	100.00%
Bootstrap support for H2ZXT8 as seed ortholog is 100%.
Bootstrap support for A3GFG1 as seed ortholog is 100%.

Group of orthologs #1609. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 S.stipitis:101

H2ZU10              	100.00%		A3LN46              	100.00%
Bootstrap support for H2ZU10 as seed ortholog is 100%.
Bootstrap support for A3LN46 as seed ortholog is 100%.

Group of orthologs #1610. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 S.stipitis:16

H3A2W0              	100.00%		A3LVS6              	100.00%
Bootstrap support for H3A2W0 as seed ortholog is 100%.
Bootstrap support for A3LVS6 as seed ortholog is 50%.
Alternative seed ortholog is A3LPN7 (16 bits away from this cluster)

Group of orthologs #1611. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 S.stipitis:101

H3B1B8              	100.00%		A3LW39              	100.00%
Bootstrap support for H3B1B8 as seed ortholog is 100%.
Bootstrap support for A3LW39 as seed ortholog is 100%.

Group of orthologs #1612. Best score 101 bits
Score difference with first non-orthologous sequence - L.chalumnae:101 S.stipitis:101

H3B5U9              	100.00%		A3LYQ3              	100.00%
Bootstrap support for H3B5U9 as seed ortholog is 100%.
Bootstrap support for A3LYQ3 as seed ortholog is 100%.

Group of orthologs #1613. Best score 100 bits
Score difference with first non-orthologous sequence - L.chalumnae:10 S.stipitis:38

H3AAY5              	100.00%		A3LQX0              	100.00%
H3B846              	11.41%		
H3BCH6              	9.38%		
H2ZZC8              	8.11%		
H3A357              	7.10%		
H3A2D0              	6.76%		
H3BHN7              	6.17%		
H3AZI9              	5.41%		
Bootstrap support for H3AAY5 as seed ortholog is 68%.
Alternative seed ortholog is H3ATP2 (10 bits away from this cluster)
Bootstrap support for A3LQX0 as seed ortholog is 94%.

Group of orthologs #1614. Best score 100 bits
Score difference with first non-orthologous sequence - L.chalumnae:100 S.stipitis:100

H2ZSU0              	100.00%		A3GH78              	100.00%
H3ATM4              	15.74%		
H3ASV4              	11.07%		
Bootstrap support for H2ZSU0 as seed ortholog is 100%.
Bootstrap support for A3GH78 as seed ortholog is 100%.

Group of orthologs #1615. Best score 100 bits
Score difference with first non-orthologous sequence - L.chalumnae:100 S.stipitis:100

H3AXH9              	100.00%		A3LPG9              	100.00%
H3B2A6              	97.54%		A3LX37              	31.68%
Bootstrap support for H3AXH9 as seed ortholog is 100%.
Bootstrap support for A3LPG9 as seed ortholog is 100%.

Group of orthologs #1616. Best score 100 bits
Score difference with first non-orthologous sequence - L.chalumnae:100 S.stipitis:100

H3B4B6              	100.00%		A3LY00              	100.00%
H3AUU5              	35.78%		
H2ZSD1              	22.17%		
Bootstrap support for H3B4B6 as seed ortholog is 100%.
Bootstrap support for A3LY00 as seed ortholog is 100%.

Group of orthologs #1617. Best score 100 bits
Score difference with first non-orthologous sequence - L.chalumnae:100 S.stipitis:100

H3AV08              	100.00%		A3LN18              	100.00%
H2ZYI6              	34.57%		
Bootstrap support for H3AV08 as seed ortholog is 100%.
Bootstrap support for A3LN18 as seed ortholog is 100%.

Group of orthologs #1618. Best score 100 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 S.stipitis:100

H3ATT8              	100.00%		A3LZX8              	100.00%
H3A1G3              	5.25%		
Bootstrap support for H3ATT8 as seed ortholog is 93%.
Bootstrap support for A3LZX8 as seed ortholog is 100%.

Group of orthologs #1619. Best score 100 bits
Score difference with first non-orthologous sequence - L.chalumnae:100 S.stipitis:100

H2ZU97              	100.00%		A3GFP4              	100.00%
Bootstrap support for H2ZU97 as seed ortholog is 100%.
Bootstrap support for A3GFP4 as seed ortholog is 100%.

Group of orthologs #1620. Best score 100 bits
Score difference with first non-orthologous sequence - L.chalumnae:100 S.stipitis:100

H3A2B6              	100.00%		A3LYM3              	100.00%
Bootstrap support for H3A2B6 as seed ortholog is 100%.
Bootstrap support for A3LYM3 as seed ortholog is 100%.

Group of orthologs #1621. Best score 100 bits
Score difference with first non-orthologous sequence - L.chalumnae:100 S.stipitis:100

H3AB44              	100.00%		A3LW92              	100.00%
Bootstrap support for H3AB44 as seed ortholog is 100%.
Bootstrap support for A3LW92 as seed ortholog is 100%.

Group of orthologs #1622. Best score 100 bits
Score difference with first non-orthologous sequence - L.chalumnae:100 S.stipitis:100

H3AGY8              	100.00%		A3LV58              	100.00%
Bootstrap support for H3AGY8 as seed ortholog is 100%.
Bootstrap support for A3LV58 as seed ortholog is 100%.

Group of orthologs #1623. Best score 100 bits
Score difference with first non-orthologous sequence - L.chalumnae:100 S.stipitis:100

H3BA89              	100.00%		A3LUV1              	100.00%
Bootstrap support for H3BA89 as seed ortholog is 100%.
Bootstrap support for A3LUV1 as seed ortholog is 100%.

Group of orthologs #1624. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 S.stipitis:99

M3XHU6              	100.00%		A3LZF5              	100.00%
H3AWV9              	34.54%		
H3BF21              	19.28%		
H3B0R7              	15.66%		
Bootstrap support for M3XHU6 as seed ortholog is 100%.
Bootstrap support for A3LZF5 as seed ortholog is 100%.

Group of orthologs #1625. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 S.stipitis:28

H2ZVG0              	100.00%		A3LQ46              	100.00%
H3AWN7              	59.42%		
H3B8T2              	48.31%		
Bootstrap support for H2ZVG0 as seed ortholog is 100%.
Bootstrap support for A3LQ46 as seed ortholog is 77%.

Group of orthologs #1626. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:6 S.stipitis:10

H3A2X2              	100.00%		A3LYR7              	100.00%
H3B1Z8              	26.64%		
H3B1K9              	24.19%		
Bootstrap support for H3A2X2 as seed ortholog is 53%.
Alternative seed ortholog is H3AV92 (6 bits away from this cluster)
Bootstrap support for A3LYR7 as seed ortholog is 57%.
Alternative seed ortholog is A3LPW7 (10 bits away from this cluster)

Group of orthologs #1627. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 S.stipitis:99

H3AMC2              	100.00%		A3LRM5              	100.00%
M3XL56              	36.66%		
Bootstrap support for H3AMC2 as seed ortholog is 100%.
Bootstrap support for A3LRM5 as seed ortholog is 100%.

Group of orthologs #1628. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 S.stipitis:99

H3AI10              	100.00%		A3LVB7              	100.00%
H3BE85              	47.16%		
Bootstrap support for H3AI10 as seed ortholog is 100%.
Bootstrap support for A3LVB7 as seed ortholog is 100%.

Group of orthologs #1629. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 S.stipitis:99

H3B455              	100.00%		A3GIB1              	100.00%
H3AK36              	32.16%		
Bootstrap support for H3B455 as seed ortholog is 100%.
Bootstrap support for A3GIB1 as seed ortholog is 100%.

Group of orthologs #1630. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 S.stipitis:99

H3B6D6              	100.00%		A3GHL9              	100.00%
H3ALB9              	33.72%		
Bootstrap support for H3B6D6 as seed ortholog is 100%.
Bootstrap support for A3GHL9 as seed ortholog is 100%.

Group of orthologs #1631. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 S.stipitis:99

H3B4I6              	100.00%		A3LPC0              	100.00%
H3BDF3              	25.40%		
Bootstrap support for H3B4I6 as seed ortholog is 100%.
Bootstrap support for A3LPC0 as seed ortholog is 100%.

Group of orthologs #1632. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 S.stipitis:99

H3BGS1              	100.00%		A3GHF6              	100.00%
H3AJ50              	52.62%		
Bootstrap support for H3BGS1 as seed ortholog is 100%.
Bootstrap support for A3GHF6 as seed ortholog is 100%.

Group of orthologs #1633. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 S.stipitis:36

H3A0K1              	100.00%		A3LN58              	100.00%
Bootstrap support for H3A0K1 as seed ortholog is 100%.
Bootstrap support for A3LN58 as seed ortholog is 91%.

Group of orthologs #1634. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 S.stipitis:99

H3B701              	100.00%		A3LW99              	100.00%
Bootstrap support for H3B701 as seed ortholog is 100%.
Bootstrap support for A3LW99 as seed ortholog is 100%.

Group of orthologs #1635. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 S.stipitis:99

H3BG30              	100.00%		A3LT47              	100.00%
Bootstrap support for H3BG30 as seed ortholog is 100%.
Bootstrap support for A3LT47 as seed ortholog is 100%.

Group of orthologs #1636. Best score 99 bits
Score difference with first non-orthologous sequence - L.chalumnae:99 S.stipitis:99

H3BCF8              	100.00%		A3LYI2              	100.00%
Bootstrap support for H3BCF8 as seed ortholog is 100%.
Bootstrap support for A3LYI2 as seed ortholog is 100%.

Group of orthologs #1637. Best score 98 bits
Score difference with first non-orthologous sequence - L.chalumnae:98 S.stipitis:7

H3B4I9              	100.00%		A3LTK6              	100.00%
                    	       		A3LTK7              	39.38%
Bootstrap support for H3B4I9 as seed ortholog is 100%.
Bootstrap support for A3LTK6 as seed ortholog is 59%.
Alternative seed ortholog is A3LTU5 (7 bits away from this cluster)

Group of orthologs #1638. Best score 98 bits
Score difference with first non-orthologous sequence - L.chalumnae:30 S.stipitis:5

H3BC02              	100.00%		A3LZ00              	100.00%
H3AZX2              	6.85%		
Bootstrap support for H3BC02 as seed ortholog is 84%.
Bootstrap support for A3LZ00 as seed ortholog is 55%.
Alternative seed ortholog is A3GGQ3 (5 bits away from this cluster)

Group of orthologs #1639. Best score 98 bits
Score difference with first non-orthologous sequence - L.chalumnae:98 S.stipitis:98

H2ZX33              	100.00%		A3LSE2              	100.00%
Bootstrap support for H2ZX33 as seed ortholog is 100%.
Bootstrap support for A3LSE2 as seed ortholog is 100%.

Group of orthologs #1640. Best score 98 bits
Score difference with first non-orthologous sequence - L.chalumnae:98 S.stipitis:98

H3AWK3              	100.00%		A3LR35              	100.00%
Bootstrap support for H3AWK3 as seed ortholog is 100%.
Bootstrap support for A3LR35 as seed ortholog is 100%.

Group of orthologs #1641. Best score 98 bits
Score difference with first non-orthologous sequence - L.chalumnae:98 S.stipitis:98

H3B2X4              	100.00%		A3LZK1              	100.00%
Bootstrap support for H3B2X4 as seed ortholog is 100%.
Bootstrap support for A3LZK1 as seed ortholog is 100%.

Group of orthologs #1642. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 S.stipitis:97

H2ZTV7              	100.00%		A3LP62              	100.00%
H3A9H8              	100.00%		A3LVG6              	33.86%
H3A752              	37.66%		
H3AQD8              	13.66%		
Bootstrap support for H2ZTV7 as seed ortholog is 100%.
Bootstrap support for H3A9H8 as seed ortholog is 100%.
Bootstrap support for A3LP62 as seed ortholog is 100%.

Group of orthologs #1643. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 S.stipitis:97

H3AMH7              	100.00%		A3GG48              	100.00%
                    	       		A3GG47              	32.26%
Bootstrap support for H3AMH7 as seed ortholog is 100%.
Bootstrap support for A3GG48 as seed ortholog is 100%.

Group of orthologs #1644. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:14 S.stipitis:97

H3A9S2              	100.00%		A3GHC6              	100.00%
Bootstrap support for H3A9S2 as seed ortholog is 85%.
Bootstrap support for A3GHC6 as seed ortholog is 100%.

Group of orthologs #1645. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 S.stipitis:97

H3AGG8              	100.00%		A3LST7              	100.00%
Bootstrap support for H3AGG8 as seed ortholog is 100%.
Bootstrap support for A3LST7 as seed ortholog is 100%.

Group of orthologs #1646. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 S.stipitis:97

H3AMY4              	100.00%		A3LRF9              	100.00%
Bootstrap support for H3AMY4 as seed ortholog is 100%.
Bootstrap support for A3LRF9 as seed ortholog is 100%.

Group of orthologs #1647. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 S.stipitis:97

H3B2E8              	100.00%		A3GGS2              	100.00%
Bootstrap support for H3B2E8 as seed ortholog is 100%.
Bootstrap support for A3GGS2 as seed ortholog is 100%.

Group of orthologs #1648. Best score 97 bits
Score difference with first non-orthologous sequence - L.chalumnae:97 S.stipitis:97

H3B281              	100.00%		A3LRE6              	100.00%
Bootstrap support for H3B281 as seed ortholog is 100%.
Bootstrap support for A3LRE6 as seed ortholog is 100%.

Group of orthologs #1649. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:23 S.stipitis:46

H3B5W8              	100.00%		A3GFB3              	100.00%
H3A8K6              	55.83%		
H3AI14              	17.24%		
H3B0L4              	17.08%		
H3B152              	17.08%		
H3B3G3              	13.46%		
H3ASZ3              	13.30%		
H3BFZ6              	12.81%		
Bootstrap support for H3B5W8 as seed ortholog is 60%.
Alternative seed ortholog is M3XIN1 (23 bits away from this cluster)
Bootstrap support for A3GFB3 as seed ortholog is 94%.

Group of orthologs #1650. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 S.stipitis:18

H2ZSY8              	100.00%		A3GHK9              	100.00%
H3AAA2              	45.77%		
Bootstrap support for H2ZSY8 as seed ortholog is 100%.
Bootstrap support for A3GHK9 as seed ortholog is 81%.

Group of orthologs #1651. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 S.stipitis:96

H3AIG3              	100.00%		A3GFI2              	100.00%
H3AXX2              	100.00%		
Bootstrap support for H3AIG3 as seed ortholog is 100%.
Bootstrap support for H3AXX2 as seed ortholog is 100%.
Bootstrap support for A3GFI2 as seed ortholog is 100%.

Group of orthologs #1652. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 S.stipitis:96

H3A1N9              	100.00%		A3LVX0              	100.00%
Bootstrap support for H3A1N9 as seed ortholog is 100%.
Bootstrap support for A3LVX0 as seed ortholog is 100%.

Group of orthologs #1653. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 S.stipitis:96

H3A4K9              	100.00%		A3LZY9              	100.00%
Bootstrap support for H3A4K9 as seed ortholog is 100%.
Bootstrap support for A3LZY9 as seed ortholog is 100%.

Group of orthologs #1654. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 S.stipitis:96

H3AMV3              	100.00%		A3LPG0              	100.00%
Bootstrap support for H3AMV3 as seed ortholog is 100%.
Bootstrap support for A3LPG0 as seed ortholog is 100%.

Group of orthologs #1655. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 S.stipitis:96

H3AWB1              	100.00%		A3LPH8              	100.00%
Bootstrap support for H3AWB1 as seed ortholog is 100%.
Bootstrap support for A3LPH8 as seed ortholog is 100%.

Group of orthologs #1656. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 S.stipitis:96

H3B6D7              	100.00%		A3GGS7              	100.00%
Bootstrap support for H3B6D7 as seed ortholog is 100%.
Bootstrap support for A3GGS7 as seed ortholog is 100%.

Group of orthologs #1657. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 S.stipitis:96

H3B5P1              	100.00%		A3LRS0              	100.00%
Bootstrap support for H3B5P1 as seed ortholog is 100%.
Bootstrap support for A3LRS0 as seed ortholog is 100%.

Group of orthologs #1658. Best score 96 bits
Score difference with first non-orthologous sequence - L.chalumnae:96 S.stipitis:96

H3BFS7              	100.00%		A3LPS5              	100.00%
Bootstrap support for H3BFS7 as seed ortholog is 100%.
Bootstrap support for A3LPS5 as seed ortholog is 100%.

Group of orthologs #1659. Best score 95 bits
Score difference with first non-orthologous sequence - L.chalumnae:95 S.stipitis:95

H3B1H0              	100.00%		A3LS62              	100.00%
H3B8N6              	100.00%		A3LP96              	100.00%
H3A6K7              	62.00%		A3GG56              	58.74%
H3AJ35              	60.74%		A3GG54              	44.50%
H3AQA5              	18.23%		A3GFP0              	30.21%
Bootstrap support for H3B1H0 as seed ortholog is 100%.
Bootstrap support for H3B8N6 as seed ortholog is 100%.
Bootstrap support for A3LS62 as seed ortholog is 100%.
Bootstrap support for A3LP96 as seed ortholog is 100%.

Group of orthologs #1660. Best score 95 bits
Score difference with first non-orthologous sequence - L.chalumnae:4 S.stipitis:95

H3BB07              	100.00%		A3LR33              	100.00%
H3ADC3              	45.91%		
H3AUW7              	45.87%		
H3A2Q8              	29.91%		
H3AS00              	7.98%		
H3BGY6              	6.50%		
Bootstrap support for H3BB07 as seed ortholog is 53%.
Alternative seed ortholog is M3XK56 (4 bits away from this cluster)
Bootstrap support for A3LR33 as seed ortholog is 100%.

Group of orthologs #1661. Best score 95 bits
Score difference with first non-orthologous sequence - L.chalumnae:95 S.stipitis:95

H3AAP4              	100.00%		A3LQL7              	100.00%
Bootstrap support for H3AAP4 as seed ortholog is 100%.
Bootstrap support for A3LQL7 as seed ortholog is 100%.

Group of orthologs #1662. Best score 95 bits
Score difference with first non-orthologous sequence - L.chalumnae:95 S.stipitis:95

H3AYD6              	100.00%		A3LRN2              	100.00%
Bootstrap support for H3AYD6 as seed ortholog is 100%.
Bootstrap support for A3LRN2 as seed ortholog is 100%.

Group of orthologs #1663. Best score 95 bits
Score difference with first non-orthologous sequence - L.chalumnae:95 S.stipitis:95

H3B5S7              	100.00%		A3LR47              	100.00%
Bootstrap support for H3B5S7 as seed ortholog is 100%.
Bootstrap support for A3LR47 as seed ortholog is 100%.

Group of orthologs #1664. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 S.stipitis:94

H3A4S4              	100.00%		A3LX23              	100.00%
H3AKZ8              	56.06%		
M3XK36              	45.69%		
H3BDZ9              	17.25%		
H3B3E2              	16.20%		
H3B0V9              	14.22%		
H3AM96              	8.97%		
H3APQ2              	7.46%		
H2ZSW4              	7.23%		
H3A551              	6.41%		
H3ATF9              	5.59%		
Bootstrap support for H3A4S4 as seed ortholog is 100%.
Bootstrap support for A3LX23 as seed ortholog is 100%.

Group of orthologs #1665. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 S.stipitis:94

H3ANS1              	100.00%		A3LQR6              	100.00%
H3AR81              	15.29%		
H3AZR8              	9.93%		
Bootstrap support for H3ANS1 as seed ortholog is 100%.
Bootstrap support for A3LQR6 as seed ortholog is 100%.

Group of orthologs #1666. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:4 S.stipitis:94

H2ZUL7              	100.00%		A3LP15              	100.00%
H2ZT05              	36.39%		
Bootstrap support for H2ZUL7 as seed ortholog is 56%.
Alternative seed ortholog is H3BGQ0 (4 bits away from this cluster)
Bootstrap support for A3LP15 as seed ortholog is 100%.

Group of orthologs #1667. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 S.stipitis:94

H3ADC8              	100.00%		A3LSE8              	100.00%
H3BE62              	24.14%		
Bootstrap support for H3ADC8 as seed ortholog is 100%.
Bootstrap support for A3LSE8 as seed ortholog is 100%.

Group of orthologs #1668. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 S.stipitis:94

H3AGE2              	100.00%		A3LVH5              	100.00%
H3ATA3              	51.85%		
Bootstrap support for H3AGE2 as seed ortholog is 100%.
Bootstrap support for A3LVH5 as seed ortholog is 100%.

Group of orthologs #1669. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:9 S.stipitis:94

H3A300              	100.00%		A3GF68              	100.00%
Bootstrap support for H3A300 as seed ortholog is 50%.
Alternative seed ortholog is H3BAY0 (9 bits away from this cluster)
Bootstrap support for A3GF68 as seed ortholog is 100%.

Group of orthologs #1670. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 S.stipitis:94

H3A573              	100.00%		A3LR92              	100.00%
Bootstrap support for H3A573 as seed ortholog is 100%.
Bootstrap support for A3LR92 as seed ortholog is 100%.

Group of orthologs #1671. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 S.stipitis:94

H3A055              	100.00%		A3LY08              	100.00%
Bootstrap support for H3A055 as seed ortholog is 100%.
Bootstrap support for A3LY08 as seed ortholog is 100%.

Group of orthologs #1672. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 S.stipitis:94

H3AGU0              	100.00%		A3LNX6              	100.00%
Bootstrap support for H3AGU0 as seed ortholog is 100%.
Bootstrap support for A3LNX6 as seed ortholog is 100%.

Group of orthologs #1673. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 S.stipitis:94

H3AD45              	100.00%		A3LSL1              	100.00%
Bootstrap support for H3AD45 as seed ortholog is 100%.
Bootstrap support for A3LSL1 as seed ortholog is 100%.

Group of orthologs #1674. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 S.stipitis:94

H3ADZ8              	100.00%		A3LYV8              	100.00%
Bootstrap support for H3ADZ8 as seed ortholog is 100%.
Bootstrap support for A3LYV8 as seed ortholog is 100%.

Group of orthologs #1675. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 S.stipitis:94

H3B1S7              	100.00%		A3LQD0              	100.00%
Bootstrap support for H3B1S7 as seed ortholog is 100%.
Bootstrap support for A3LQD0 as seed ortholog is 100%.

Group of orthologs #1676. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 S.stipitis:94

H3B9V9              	100.00%		A3LPL5              	100.00%
Bootstrap support for H3B9V9 as seed ortholog is 98%.
Bootstrap support for A3LPL5 as seed ortholog is 100%.

Group of orthologs #1677. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 S.stipitis:94

M3XHH6              	100.00%		A3GG45              	100.00%
Bootstrap support for M3XHH6 as seed ortholog is 100%.
Bootstrap support for A3GG45 as seed ortholog is 100%.

Group of orthologs #1678. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 S.stipitis:94

H3BDI5              	100.00%		A3LR64              	100.00%
Bootstrap support for H3BDI5 as seed ortholog is 100%.
Bootstrap support for A3LR64 as seed ortholog is 100%.

Group of orthologs #1679. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 S.stipitis:94

H3BD22              	100.00%		A3LV28              	100.00%
Bootstrap support for H3BD22 as seed ortholog is 88%.
Bootstrap support for A3LV28 as seed ortholog is 100%.

Group of orthologs #1680. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 S.stipitis:94

M3XGZ9              	100.00%		A3LQB8              	100.00%
Bootstrap support for M3XGZ9 as seed ortholog is 100%.
Bootstrap support for A3LQB8 as seed ortholog is 100%.

Group of orthologs #1681. Best score 94 bits
Score difference with first non-orthologous sequence - L.chalumnae:94 S.stipitis:94

H3BDH2              	100.00%		A3LVB9              	100.00%
Bootstrap support for H3BDH2 as seed ortholog is 100%.
Bootstrap support for A3LVB9 as seed ortholog is 100%.

Group of orthologs #1682. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:6 S.stipitis:28

H3AHF4              	100.00%		A3LVX4              	100.00%
                    	       		A3LVX5              	94.07%
                    	       		A3LPE1              	82.72%
                    	       		A3LX83              	27.41%
Bootstrap support for H3AHF4 as seed ortholog is 57%.
Alternative seed ortholog is H3B355 (6 bits away from this cluster)
Bootstrap support for A3LVX4 as seed ortholog is 80%.

Group of orthologs #1683. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:29 S.stipitis:39

H3ASW5              	100.00%		A3M099              	100.00%
H3B547              	47.06%		
H3AEB8              	21.69%		
Bootstrap support for H3ASW5 as seed ortholog is 92%.
Bootstrap support for A3M099 as seed ortholog is 96%.

Group of orthologs #1684. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 S.stipitis:93

H3AUU8              	100.00%		A3GGY1              	100.00%
H3AHX6              	59.65%		
Bootstrap support for H3AUU8 as seed ortholog is 100%.
Bootstrap support for A3GGY1 as seed ortholog is 100%.

Group of orthologs #1685. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 S.stipitis:93

H3AUW2              	100.00%		A3M0P7              	100.00%
                    	       		A3GI15              	33.33%
Bootstrap support for H3AUW2 as seed ortholog is 100%.
Bootstrap support for A3M0P7 as seed ortholog is 100%.

Group of orthologs #1686. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 S.stipitis:93

H3A2G5              	100.00%		A3LUS1              	100.00%
Bootstrap support for H3A2G5 as seed ortholog is 100%.
Bootstrap support for A3LUS1 as seed ortholog is 100%.

Group of orthologs #1687. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 S.stipitis:93

H3AJ99              	100.00%		A3GHB8              	100.00%
Bootstrap support for H3AJ99 as seed ortholog is 100%.
Bootstrap support for A3GHB8 as seed ortholog is 100%.

Group of orthologs #1688. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 S.stipitis:93

H3A4L5              	100.00%		A3M002              	100.00%
Bootstrap support for H3A4L5 as seed ortholog is 100%.
Bootstrap support for A3M002 as seed ortholog is 100%.

Group of orthologs #1689. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 S.stipitis:93

H3AJF5              	100.00%		A3LXD7              	100.00%
Bootstrap support for H3AJF5 as seed ortholog is 100%.
Bootstrap support for A3LXD7 as seed ortholog is 100%.

Group of orthologs #1690. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 S.stipitis:93

H3ARZ6              	100.00%		A3LYW4              	100.00%
Bootstrap support for H3ARZ6 as seed ortholog is 100%.
Bootstrap support for A3LYW4 as seed ortholog is 100%.

Group of orthologs #1691. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:93 S.stipitis:24

H3AXJ2              	100.00%		A3LUI2              	100.00%
Bootstrap support for H3AXJ2 as seed ortholog is 100%.
Bootstrap support for A3LUI2 as seed ortholog is 64%.
Alternative seed ortholog is A3LPW4 (24 bits away from this cluster)

Group of orthologs #1692. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:46 S.stipitis:93

H3AXF9              	100.00%		A3LUU2              	100.00%
Bootstrap support for H3AXF9 as seed ortholog is 99%.
Bootstrap support for A3LUU2 as seed ortholog is 100%.

Group of orthologs #1693. Best score 93 bits
Score difference with first non-orthologous sequence - L.chalumnae:33 S.stipitis:93

H3B3P9              	100.00%		A3LZB9              	100.00%
Bootstrap support for H3B3P9 as seed ortholog is 81%.
Bootstrap support for A3LZB9 as seed ortholog is 100%.

Group of orthologs #1694. Best score 92 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 S.stipitis:5

M3XJA3              	100.00%		A3LU39              	100.00%
H3BAW3              	27.65%		
Bootstrap support for M3XJA3 as seed ortholog is 100%.
Bootstrap support for A3LU39 as seed ortholog is 59%.
Alternative seed ortholog is A3LSC2 (5 bits away from this cluster)

Group of orthologs #1695. Best score 92 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 S.stipitis:92

H3A1B2              	100.00%		A3LVK7              	100.00%
Bootstrap support for H3A1B2 as seed ortholog is 100%.
Bootstrap support for A3LVK7 as seed ortholog is 100%.

Group of orthologs #1696. Best score 92 bits
Score difference with first non-orthologous sequence - L.chalumnae:41 S.stipitis:92

H3ALE2              	100.00%		A3GGM6              	100.00%
Bootstrap support for H3ALE2 as seed ortholog is 99%.
Bootstrap support for A3GGM6 as seed ortholog is 100%.

Group of orthologs #1697. Best score 92 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 S.stipitis:92

H3AW82              	100.00%		A3GHW6              	100.00%
Bootstrap support for H3AW82 as seed ortholog is 100%.
Bootstrap support for A3GHW6 as seed ortholog is 100%.

Group of orthologs #1698. Best score 92 bits
Score difference with first non-orthologous sequence - L.chalumnae:92 S.stipitis:92

H3BDX7              	100.00%		A3LT09              	100.00%
Bootstrap support for H3BDX7 as seed ortholog is 100%.
Bootstrap support for A3LT09 as seed ortholog is 100%.

Group of orthologs #1699. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 S.stipitis:91

H3BF73              	100.00%		A3LYA4              	100.00%
H3A8B9              	28.97%		
H3BDT7              	25.24%		
H3AJC1              	23.45%		
H3A6C7              	20.41%		
H3A144              	17.38%		
H3B2S2              	8.14%		
Bootstrap support for H3BF73 as seed ortholog is 100%.
Bootstrap support for A3LYA4 as seed ortholog is 100%.

Group of orthologs #1700. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 S.stipitis:91

H2ZS62              	100.00%		A3GF01              	100.00%
H3ALA7              	22.40%		
Bootstrap support for H2ZS62 as seed ortholog is 100%.
Bootstrap support for A3GF01 as seed ortholog is 100%.

Group of orthologs #1701. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 S.stipitis:91

H3ADL5              	100.00%		A3LSL9              	100.00%
H3AFF7              	15.81%		
Bootstrap support for H3ADL5 as seed ortholog is 100%.
Bootstrap support for A3LSL9 as seed ortholog is 100%.

Group of orthologs #1702. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 S.stipitis:91

H3B9C9              	100.00%		A3LT34              	100.00%
H3BFJ3              	13.77%		
Bootstrap support for H3B9C9 as seed ortholog is 100%.
Bootstrap support for A3LT34 as seed ortholog is 100%.

Group of orthologs #1703. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 S.stipitis:91

M3XHC8              	100.00%		A3LX86              	100.00%
H2ZRK7              	42.59%		
Bootstrap support for M3XHC8 as seed ortholog is 100%.
Bootstrap support for A3LX86 as seed ortholog is 100%.

Group of orthologs #1704. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:9 S.stipitis:91

M3XIM0              	100.00%		A3M0P0              	100.00%
H3B2X0              	25.93%		
Bootstrap support for M3XIM0 as seed ortholog is 60%.
Alternative seed ortholog is H3ADH9 (9 bits away from this cluster)
Bootstrap support for A3M0P0 as seed ortholog is 100%.

Group of orthologs #1705. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 S.stipitis:91

H2ZWA8              	100.00%		A3LN77              	100.00%
Bootstrap support for H2ZWA8 as seed ortholog is 100%.
Bootstrap support for A3LN77 as seed ortholog is 100%.

Group of orthologs #1706. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 S.stipitis:91

H2ZW73              	100.00%		A3LQM2              	100.00%
Bootstrap support for H2ZW73 as seed ortholog is 100%.
Bootstrap support for A3LQM2 as seed ortholog is 100%.

Group of orthologs #1707. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 S.stipitis:91

H2ZSU7              	100.00%		A3LZC5              	100.00%
Bootstrap support for H2ZSU7 as seed ortholog is 100%.
Bootstrap support for A3LZC5 as seed ortholog is 100%.

Group of orthologs #1708. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 S.stipitis:91

H3A4J3              	100.00%		A3LW75              	100.00%
Bootstrap support for H3A4J3 as seed ortholog is 100%.
Bootstrap support for A3LW75 as seed ortholog is 100%.

Group of orthologs #1709. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 S.stipitis:91

H3AVR8              	100.00%		A3LVZ2              	100.00%
Bootstrap support for H3AVR8 as seed ortholog is 100%.
Bootstrap support for A3LVZ2 as seed ortholog is 100%.

Group of orthologs #1710. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 S.stipitis:91

H3B7I8              	100.00%		A3LNM0              	100.00%
Bootstrap support for H3B7I8 as seed ortholog is 100%.
Bootstrap support for A3LNM0 as seed ortholog is 100%.

Group of orthologs #1711. Best score 91 bits
Score difference with first non-orthologous sequence - L.chalumnae:91 S.stipitis:91

H3BF53              	100.00%		A3GGA3              	100.00%
Bootstrap support for H3BF53 as seed ortholog is 100%.
Bootstrap support for A3GGA3 as seed ortholog is 100%.

Group of orthologs #1712. Best score 90 bits
Score difference with first non-orthologous sequence - L.chalumnae:4 S.stipitis:90

H3B0U2              	100.00%		A3GHM0              	100.00%
H3AAM1              	9.92%		
H3B109              	9.33%		
H3ATC6              	8.05%		
H3BEQ4              	7.35%		
H2ZX89              	5.95%		
M3XIU6              	5.25%		
Bootstrap support for H3B0U2 as seed ortholog is 56%.
Alternative seed ortholog is H3AHA5 (4 bits away from this cluster)
Bootstrap support for A3GHM0 as seed ortholog is 100%.

Group of orthologs #1713. Best score 90 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 S.stipitis:90

H3ACB6              	100.00%		A3LRX7              	100.00%
H3AI54              	8.32%		A3GF42              	27.41%
Bootstrap support for H3ACB6 as seed ortholog is 100%.
Bootstrap support for A3LRX7 as seed ortholog is 100%.

Group of orthologs #1714. Best score 90 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 S.stipitis:90

H2ZWU0              	100.00%		A3LZ40              	100.00%
H3AQH1              	64.44%		
Bootstrap support for H2ZWU0 as seed ortholog is 100%.
Bootstrap support for A3LZ40 as seed ortholog is 100%.

Group of orthologs #1715. Best score 90 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 S.stipitis:90

H3AHD2              	100.00%		A3GGY4              	100.00%
Bootstrap support for H3AHD2 as seed ortholog is 100%.
Bootstrap support for A3GGY4 as seed ortholog is 100%.

Group of orthologs #1716. Best score 90 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 S.stipitis:90

H3ADY2              	100.00%		A3LQS6              	100.00%
Bootstrap support for H3ADY2 as seed ortholog is 100%.
Bootstrap support for A3LQS6 as seed ortholog is 100%.

Group of orthologs #1717. Best score 90 bits
Score difference with first non-orthologous sequence - L.chalumnae:90 S.stipitis:90

H3AVV5              	100.00%		A3LV45              	100.00%
Bootstrap support for H3AVV5 as seed ortholog is 100%.
Bootstrap support for A3LV45 as seed ortholog is 100%.

Group of orthologs #1718. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 S.stipitis:30

H3AC40              	100.00%		A3LWR5              	100.00%
H3A8F4              	6.26%		
H3B1H9              	6.04%		
H3B2A8              	5.82%		
Bootstrap support for H3AC40 as seed ortholog is 100%.
Bootstrap support for A3LWR5 as seed ortholog is 77%.

Group of orthologs #1719. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:2 S.stipitis:89

H3A738              	100.00%		A3LNA0              	100.00%
H3B661              	61.98%		A3GI09              	46.81%
Bootstrap support for H3A738 as seed ortholog is 56%.
Alternative seed ortholog is H2ZYU3 (2 bits away from this cluster)
Bootstrap support for A3LNA0 as seed ortholog is 100%.

Group of orthologs #1720. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 S.stipitis:89

H3AXG1              	100.00%		A3LNK8              	100.00%
H3A7J2              	54.74%		
H3B2A1              	5.11%		
Bootstrap support for H3AXG1 as seed ortholog is 100%.
Bootstrap support for A3LNK8 as seed ortholog is 100%.

Group of orthologs #1721. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 S.stipitis:89

H3AX36              	100.00%		A3LRK7              	100.00%
H3AIC5              	52.38%		
Bootstrap support for H3AX36 as seed ortholog is 100%.
Bootstrap support for A3LRK7 as seed ortholog is 100%.

Group of orthologs #1722. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 S.stipitis:89

M3XH09              	100.00%		A3GIC1              	100.00%
                    	       		A3GIC5              	28.89%
Bootstrap support for M3XH09 as seed ortholog is 100%.
Bootstrap support for A3GIC1 as seed ortholog is 100%.

Group of orthologs #1723. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 S.stipitis:89

H2ZTZ7              	100.00%		A3GGF4              	100.00%
Bootstrap support for H2ZTZ7 as seed ortholog is 100%.
Bootstrap support for A3GGF4 as seed ortholog is 100%.

Group of orthologs #1724. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 S.stipitis:89

H3A968              	100.00%		A3GFY5              	100.00%
Bootstrap support for H3A968 as seed ortholog is 100%.
Bootstrap support for A3GFY5 as seed ortholog is 100%.

Group of orthologs #1725. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 S.stipitis:89

H3A3A7              	100.00%		A3LUB2              	100.00%
Bootstrap support for H3A3A7 as seed ortholog is 100%.
Bootstrap support for A3LUB2 as seed ortholog is 100%.

Group of orthologs #1726. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 S.stipitis:89

H3AJE9              	100.00%		A3LNQ2              	100.00%
Bootstrap support for H3AJE9 as seed ortholog is 100%.
Bootstrap support for A3LNQ2 as seed ortholog is 100%.

Group of orthologs #1727. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 S.stipitis:89

H3AWU6              	100.00%		A3GI81              	100.00%
Bootstrap support for H3AWU6 as seed ortholog is 100%.
Bootstrap support for A3GI81 as seed ortholog is 100%.

Group of orthologs #1728. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 S.stipitis:89

H3AXI6              	100.00%		A3LQU5              	100.00%
Bootstrap support for H3AXI6 as seed ortholog is 100%.
Bootstrap support for A3LQU5 as seed ortholog is 100%.

Group of orthologs #1729. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 S.stipitis:89

H3BCJ6              	100.00%		A3GHM4              	100.00%
Bootstrap support for H3BCJ6 as seed ortholog is 100%.
Bootstrap support for A3GHM4 as seed ortholog is 100%.

Group of orthologs #1730. Best score 89 bits
Score difference with first non-orthologous sequence - L.chalumnae:89 S.stipitis:89

H3B8F8              	100.00%		A3LUE3              	100.00%
Bootstrap support for H3B8F8 as seed ortholog is 100%.
Bootstrap support for A3LUE3 as seed ortholog is 100%.

Group of orthologs #1731. Best score 88 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 S.stipitis:88

H3AA50              	100.00%		A3LNL6              	100.00%
Bootstrap support for H3AA50 as seed ortholog is 100%.
Bootstrap support for A3LNL6 as seed ortholog is 100%.

Group of orthologs #1732. Best score 88 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 S.stipitis:88

H3AAA8              	100.00%		A3LPJ0              	100.00%
Bootstrap support for H3AAA8 as seed ortholog is 100%.
Bootstrap support for A3LPJ0 as seed ortholog is 100%.

Group of orthologs #1733. Best score 88 bits
Score difference with first non-orthologous sequence - L.chalumnae:88 S.stipitis:88

H3A473              	100.00%		A3LV02              	100.00%
Bootstrap support for H3A473 as seed ortholog is 100%.
Bootstrap support for A3LV02 as seed ortholog is 100%.

Group of orthologs #1734. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:34 S.stipitis:87

H2ZWX9              	100.00%		A3LWR6              	100.00%
                    	       		A3LWS7              	23.70%
Bootstrap support for H2ZWX9 as seed ortholog is 86%.
Bootstrap support for A3LWR6 as seed ortholog is 100%.

Group of orthologs #1735. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 S.stipitis:87

H2ZVQ9              	100.00%		A3LYP8              	100.00%
H3AQR4              	69.33%		
Bootstrap support for H2ZVQ9 as seed ortholog is 100%.
Bootstrap support for A3LYP8 as seed ortholog is 100%.

Group of orthologs #1736. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 S.stipitis:87

H3AQ84              	100.00%		A3GI68              	100.00%
H3A5W3              	58.17%		
Bootstrap support for H3AQ84 as seed ortholog is 100%.
Bootstrap support for A3GI68 as seed ortholog is 100%.

Group of orthologs #1737. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 S.stipitis:87

H3AP95              	100.00%		A3LR97              	100.00%
H2ZW99              	42.25%		
Bootstrap support for H3AP95 as seed ortholog is 100%.
Bootstrap support for A3LR97 as seed ortholog is 100%.

Group of orthologs #1738. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 S.stipitis:87

H3A1P6              	100.00%		A3LXH3              	100.00%
Bootstrap support for H3A1P6 as seed ortholog is 100%.
Bootstrap support for A3LXH3 as seed ortholog is 100%.

Group of orthologs #1739. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:5 S.stipitis:87

H3B3H3              	100.00%		A3GGU4              	100.00%
Bootstrap support for H3B3H3 as seed ortholog is 51%.
Alternative seed ortholog is H3B605 (5 bits away from this cluster)
Bootstrap support for A3GGU4 as seed ortholog is 100%.

Group of orthologs #1740. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 S.stipitis:87

H3AVV6              	100.00%		A3LT54              	100.00%
Bootstrap support for H3AVV6 as seed ortholog is 100%.
Bootstrap support for A3LT54 as seed ortholog is 100%.

Group of orthologs #1741. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 S.stipitis:87

H3AZG4              	100.00%		A3LR68              	100.00%
Bootstrap support for H3AZG4 as seed ortholog is 100%.
Bootstrap support for A3LR68 as seed ortholog is 100%.

Group of orthologs #1742. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:34 S.stipitis:87

H3AS06              	100.00%		A3LYA5              	100.00%
Bootstrap support for H3AS06 as seed ortholog is 93%.
Bootstrap support for A3LYA5 as seed ortholog is 100%.

Group of orthologs #1743. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 S.stipitis:87

H3B577              	100.00%		A3LP63              	100.00%
Bootstrap support for H3B577 as seed ortholog is 100%.
Bootstrap support for A3LP63 as seed ortholog is 100%.

Group of orthologs #1744. Best score 87 bits
Score difference with first non-orthologous sequence - L.chalumnae:87 S.stipitis:87

H3B875              	100.00%		A3LSG4              	100.00%
Bootstrap support for H3B875 as seed ortholog is 100%.
Bootstrap support for A3LSG4 as seed ortholog is 100%.

Group of orthologs #1745. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 S.stipitis:86

H3ANV6              	100.00%		A3LRT2              	100.00%
H3B1X9              	70.10%		
H3AV61              	64.44%		
H3AAT4              	63.65%		
H2ZUV2              	40.20%		
H3ANR4              	38.17%		
H2ZY47              	37.26%		
H2ZYE0              	30.01%		
H3A0Z6              	22.54%		
H3AQT2              	21.86%		
H3AP49              	18.01%		
H3A8U3              	17.67%		
H3B7F5              	17.55%		
H3BDN3              	17.10%		
H3A6W8              	16.65%		
H3A6S1              	16.19%		
H3AAG5              	15.97%		
H3AJP3              	15.86%		
H3A303              	15.74%		
H3AUL7              	15.63%		
H3A4H9              	15.40%		
H3AH01              	14.95%		
H3A5L0              	14.84%		
H3A146              	14.61%		
H3AM58              	13.48%		
H3B6Z7              	13.48%		
H2ZVU2              	13.36%		
H3A2M1              	13.02%		
M3XGK8              	13.02%		
H3AKG2              	13.02%		
H3AKX5              	12.91%		
H3AAS9              	12.80%		
H3AUS4              	12.57%		
H3AEI1              	12.46%		
H3AVG9              	12.46%		
H3AIS9              	12.00%		
H3AUX0              	11.78%		
H3ABS0              	11.55%		
H3A775              	11.33%		
H3AJB4              	10.99%		
H3A9I7              	10.99%		
H3ASV9              	10.76%		
H3B6X8              	10.76%		
H3A0W5              	10.65%		
H2ZRR3              	10.65%		
H3AVW9              	10.42%		
H3A2W2              	10.31%		
H3BBU1              	10.31%		
H3ALF5              	10.31%		
H3B5D1              	10.19%		
H3AY52              	9.85%		
H3AJ53              	9.74%		
H3AHT4              	9.63%		
H2ZUK4              	9.51%		
H3ANY6              	9.06%		
H3B518              	8.95%		
H3BCF5              	8.49%		
H3A203              	8.15%		
H3AID4              	7.93%		
H3AZH0              	7.36%		
H3A8D3              	7.25%		
H3A6Q7              	7.02%		
H3AIV2              	7.02%		
H3BBX8              	7.02%		
H3AH53              	6.91%		
H3AB53              	6.46%		
H3B247              	5.89%		
H3BFD7              	5.44%		
H3A121              	5.44%		
H3AMY3              	5.32%		
H3AZQ1              	5.32%		
Bootstrap support for H3ANV6 as seed ortholog is 100%.
Bootstrap support for A3LRT2 as seed ortholog is 100%.

Group of orthologs #1746. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 S.stipitis:86

H3AZW8              	100.00%		A3LW00              	100.00%
M3XKW9              	5.26%		A3LVZ9              	20.78%
Bootstrap support for H3AZW8 as seed ortholog is 100%.
Bootstrap support for A3LW00 as seed ortholog is 100%.

Group of orthologs #1747. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 S.stipitis:86

H2ZRU6              	100.00%		A3LWC8              	100.00%
                    	       		A3GFD7              	11.11%
Bootstrap support for H2ZRU6 as seed ortholog is 100%.
Bootstrap support for A3LWC8 as seed ortholog is 100%.

Group of orthologs #1748. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 S.stipitis:86

H3A116              	100.00%		A3LRK2              	100.00%
H3BEW6              	42.57%		
Bootstrap support for H3A116 as seed ortholog is 100%.
Bootstrap support for A3LRK2 as seed ortholog is 100%.

Group of orthologs #1749. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 S.stipitis:86

H2ZYM0              	100.00%		A3LQA9              	100.00%
Bootstrap support for H2ZYM0 as seed ortholog is 100%.
Bootstrap support for A3LQA9 as seed ortholog is 100%.

Group of orthologs #1750. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 S.stipitis:86

H3A5C3              	100.00%		A3GG04              	100.00%
Bootstrap support for H3A5C3 as seed ortholog is 100%.
Bootstrap support for A3GG04 as seed ortholog is 100%.

Group of orthologs #1751. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 S.stipitis:86

H3AAH0              	100.00%		A3LPJ1              	100.00%
Bootstrap support for H3AAH0 as seed ortholog is 100%.
Bootstrap support for A3LPJ1 as seed ortholog is 100%.

Group of orthologs #1752. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 S.stipitis:86

H3AN51              	100.00%		A3GGN8              	100.00%
Bootstrap support for H3AN51 as seed ortholog is 100%.
Bootstrap support for A3GGN8 as seed ortholog is 100%.

Group of orthologs #1753. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 S.stipitis:86

H3A9L3              	100.00%		A3LZG5              	100.00%
Bootstrap support for H3A9L3 as seed ortholog is 100%.
Bootstrap support for A3LZG5 as seed ortholog is 100%.

Group of orthologs #1754. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:26 S.stipitis:86

H3AI59              	100.00%		A3LTQ1              	100.00%
Bootstrap support for H3AI59 as seed ortholog is 72%.
Alternative seed ortholog is H3BHA6 (26 bits away from this cluster)
Bootstrap support for A3LTQ1 as seed ortholog is 100%.

Group of orthologs #1755. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:14 S.stipitis:86

H3ARY8              	100.00%		A3GI54              	100.00%
Bootstrap support for H3ARY8 as seed ortholog is 66%.
Alternative seed ortholog is H2ZT08 (14 bits away from this cluster)
Bootstrap support for A3GI54 as seed ortholog is 100%.

Group of orthologs #1756. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 S.stipitis:86

H3ASH2              	100.00%		A3LNI0              	100.00%
Bootstrap support for H3ASH2 as seed ortholog is 100%.
Bootstrap support for A3LNI0 as seed ortholog is 100%.

Group of orthologs #1757. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:30 S.stipitis:86

H3AM59              	100.00%		A3M098              	100.00%
Bootstrap support for H3AM59 as seed ortholog is 86%.
Bootstrap support for A3M098 as seed ortholog is 100%.

Group of orthologs #1758. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 S.stipitis:86

H3AWR8              	100.00%		A3LXT7              	100.00%
Bootstrap support for H3AWR8 as seed ortholog is 100%.
Bootstrap support for A3LXT7 as seed ortholog is 100%.

Group of orthologs #1759. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 S.stipitis:86

M3XI18              	100.00%		A3LPW2              	100.00%
Bootstrap support for M3XI18 as seed ortholog is 100%.
Bootstrap support for A3LPW2 as seed ortholog is 100%.

Group of orthologs #1760. Best score 86 bits
Score difference with first non-orthologous sequence - L.chalumnae:86 S.stipitis:86

H3BFV1              	100.00%		A3LUD6              	100.00%
Bootstrap support for H3BFV1 as seed ortholog is 100%.
Bootstrap support for A3LUD6 as seed ortholog is 100%.

Group of orthologs #1761. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 S.stipitis:85

H3BHB4              	100.00%		A3LT33              	100.00%
                    	       		A3LT31              	20.04%
                    	       		A3LT32              	5.45%
Bootstrap support for H3BHB4 as seed ortholog is 100%.
Bootstrap support for A3LT33 as seed ortholog is 100%.

Group of orthologs #1762. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 S.stipitis:85

H3BD50              	100.00%		A3LQG7              	100.00%
                    	       		A3LZA6              	15.30%
Bootstrap support for H3BD50 as seed ortholog is 100%.
Bootstrap support for A3LQG7 as seed ortholog is 100%.

Group of orthologs #1763. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 S.stipitis:85

H3A3M1              	100.00%		A3GI12              	100.00%
Bootstrap support for H3A3M1 as seed ortholog is 100%.
Bootstrap support for A3GI12 as seed ortholog is 100%.

Group of orthologs #1764. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 S.stipitis:85

H3A0T1              	100.00%		A3LRD0              	100.00%
Bootstrap support for H3A0T1 as seed ortholog is 100%.
Bootstrap support for A3LRD0 as seed ortholog is 100%.

Group of orthologs #1765. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 S.stipitis:85

H3AYR8              	100.00%		A3GGA4              	100.00%
Bootstrap support for H3AYR8 as seed ortholog is 100%.
Bootstrap support for A3GGA4 as seed ortholog is 100%.

Group of orthologs #1766. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:85 S.stipitis:85

H3B3A9              	100.00%		A3GFT9              	100.00%
Bootstrap support for H3B3A9 as seed ortholog is 100%.
Bootstrap support for A3GFT9 as seed ortholog is 100%.

Group of orthologs #1767. Best score 85 bits
Score difference with first non-orthologous sequence - L.chalumnae:38 S.stipitis:85

H3AX79              	100.00%		A3LZL8              	100.00%
Bootstrap support for H3AX79 as seed ortholog is 96%.
Bootstrap support for A3LZL8 as seed ortholog is 100%.

Group of orthologs #1768. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 S.stipitis:84

H3A4K5              	100.00%		A3GFI0              	100.00%
H3BDE1              	30.35%		
Bootstrap support for H3A4K5 as seed ortholog is 100%.
Bootstrap support for A3GFI0 as seed ortholog is 100%.

Group of orthologs #1769. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 S.stipitis:84

H3AN07              	100.00%		A3GIB3              	100.00%
Bootstrap support for H3AN07 as seed ortholog is 100%.
Bootstrap support for A3GIB3 as seed ortholog is 100%.

Group of orthologs #1770. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 S.stipitis:84

H3ANL4              	100.00%		A3LMZ1              	100.00%
Bootstrap support for H3ANL4 as seed ortholog is 100%.
Bootstrap support for A3LMZ1 as seed ortholog is 100%.

Group of orthologs #1771. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 S.stipitis:84

H3B2M9              	100.00%		A3GF37              	100.00%
Bootstrap support for H3B2M9 as seed ortholog is 100%.
Bootstrap support for A3GF37 as seed ortholog is 100%.

Group of orthologs #1772. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 S.stipitis:84

H3B6I9              	100.00%		A3GGE0              	100.00%
Bootstrap support for H3B6I9 as seed ortholog is 100%.
Bootstrap support for A3GGE0 as seed ortholog is 100%.

Group of orthologs #1773. Best score 84 bits
Score difference with first non-orthologous sequence - L.chalumnae:84 S.stipitis:84

H3B6R5              	100.00%		A3LTG9              	100.00%
Bootstrap support for H3B6R5 as seed ortholog is 100%.
Bootstrap support for A3LTG9 as seed ortholog is 100%.

Group of orthologs #1774. Best score 83 bits
Score difference with first non-orthologous sequence - L.chalumnae:25 S.stipitis:83

H3ACY1              	100.00%		A3LNN9              	100.00%
H2ZV34              	46.10%		
H2ZUV0              	17.74%		
H3BG10              	16.88%		
H2ZXK7              	15.94%		
H3A395              	14.31%		
H3AP61              	11.48%		
H3ASA4              	10.71%		
H3B8J1              	9.60%		
Bootstrap support for H3ACY1 as seed ortholog is 65%.
Alternative seed ortholog is H3ALS7 (25 bits away from this cluster)
Bootstrap support for A3LNN9 as seed ortholog is 100%.

Group of orthologs #1775. Best score 83 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 S.stipitis:83

H3AG96              	100.00%		A3LXL5              	100.00%
H3BHV8              	36.12%		
H3ABG3              	35.40%		
H2ZTH2              	11.59%		
Bootstrap support for H3AG96 as seed ortholog is 100%.
Bootstrap support for A3LXL5 as seed ortholog is 100%.

Group of orthologs #1776. Best score 83 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 S.stipitis:83

H3B579              	100.00%		A3LNS9              	100.00%
Bootstrap support for H3B579 as seed ortholog is 100%.
Bootstrap support for A3LNS9 as seed ortholog is 100%.

Group of orthologs #1777. Best score 83 bits
Score difference with first non-orthologous sequence - L.chalumnae:83 S.stipitis:83

H3BGN8              	100.00%		A3LSN4              	100.00%
Bootstrap support for H3BGN8 as seed ortholog is 100%.
Bootstrap support for A3LSN4 as seed ortholog is 100%.

Group of orthologs #1778. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 S.stipitis:29

H3BCV5              	100.00%		A3GFQ1              	100.00%
H3A5L8              	66.67%		A3LZA0              	27.41%
H3AGX9              	57.38%		A3LUX3              	27.41%
H3B3Y7              	49.16%		A3LS65              	27.08%
H3B2L2              	33.78%		A3LNX9              	26.75%
H3B9P4              	32.01%		A3GF84              	25.97%
                    	       		A3LVM7              	25.42%
                    	       		A3LVE5              	25.42%
                    	       		A3LQF6              	24.64%
                    	       		A3LWY1              	22.97%
                    	       		A3GHU4              	22.86%
                    	       		A3LRB7              	22.86%
                    	       		A3GGS5              	18.98%
                    	       		A3LNV7              	18.87%
                    	       		A3LUT5              	17.76%
                    	       		A3GFL8              	16.65%
                    	       		A3GG77              	15.65%
                    	       		A3GGY0              	15.21%
                    	       		A3LSN9              	14.32%
                    	       		A3GET0              	14.10%
                    	       		A3LPC8              	13.10%
                    	       		A3LUI5              	12.54%
                    	       		A3LRB6              	12.54%
                    	       		A3M039              	12.10%
Bootstrap support for H3BCV5 as seed ortholog is 100%.
Bootstrap support for A3GFQ1 as seed ortholog is 46%.
Alternative seed ortholog is A3GFU3 (29 bits away from this cluster)

Group of orthologs #1779. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 S.stipitis:34

H3AR67              	100.00%		A3LV21              	100.00%
                    	       		A3LU73              	44.78%
                    	       		A3LXG2              	26.24%
                    	       		A3GGH1              	25.84%
                    	       		A3LVX6              	23.30%
                    	       		A3GGH0              	14.79%
Bootstrap support for H3AR67 as seed ortholog is 100%.
Bootstrap support for A3LV21 as seed ortholog is 65%.
Alternative seed ortholog is A3LVE6 (34 bits away from this cluster)

Group of orthologs #1780. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 S.stipitis:82

H2ZWT0              	100.00%		A3LTK9              	9.29%
H3AMM3              	100.00%		A3LZE6              	100.00%
                    	       		A3LRE1              	6.93%
Bootstrap support for H2ZWT0 as seed ortholog is 100%.
Bootstrap support for H3AMM3 as seed ortholog is 100%.
Bootstrap support for A3LZE6 as seed ortholog is 100%.

Group of orthologs #1781. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:26 S.stipitis:82

H3A3D2              	100.00%		A3LYV7              	100.00%
H3B5V0              	11.07%		
Bootstrap support for H3A3D2 as seed ortholog is 81%.
Bootstrap support for A3LYV7 as seed ortholog is 100%.

Group of orthologs #1782. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 S.stipitis:82

H3ARR6              	100.00%		A3LWX1              	100.00%
H2ZUP3              	5.39%		
Bootstrap support for H3ARR6 as seed ortholog is 100%.
Bootstrap support for A3LWX1 as seed ortholog is 100%.

Group of orthologs #1783. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 S.stipitis:82

H3B292              	100.00%		A3LVJ7              	100.00%
H3B737              	57.42%		
Bootstrap support for H3B292 as seed ortholog is 100%.
Bootstrap support for A3LVJ7 as seed ortholog is 100%.

Group of orthologs #1784. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 S.stipitis:13

H2ZZI9              	100.00%		A3GFR3              	100.00%
Bootstrap support for H2ZZI9 as seed ortholog is 100%.
Bootstrap support for A3GFR3 as seed ortholog is 81%.

Group of orthologs #1785. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 S.stipitis:82

H3A3Z2              	100.00%		A3LRX1              	100.00%
Bootstrap support for H3A3Z2 as seed ortholog is 100%.
Bootstrap support for A3LRX1 as seed ortholog is 100%.

Group of orthologs #1786. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 S.stipitis:82

H3AKA0              	100.00%		A3LQI9              	100.00%
Bootstrap support for H3AKA0 as seed ortholog is 100%.
Bootstrap support for A3LQI9 as seed ortholog is 100%.

Group of orthologs #1787. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 S.stipitis:82

H3AN75              	100.00%		A3LUH8              	100.00%
Bootstrap support for H3AN75 as seed ortholog is 100%.
Bootstrap support for A3LUH8 as seed ortholog is 100%.

Group of orthologs #1788. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 S.stipitis:82

H3AXL1              	100.00%		A3GH76              	100.00%
Bootstrap support for H3AXL1 as seed ortholog is 100%.
Bootstrap support for A3GH76 as seed ortholog is 100%.

Group of orthologs #1789. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 S.stipitis:82

H3B1B1              	100.00%		A3LPD8              	100.00%
Bootstrap support for H3B1B1 as seed ortholog is 100%.
Bootstrap support for A3LPD8 as seed ortholog is 100%.

Group of orthologs #1790. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:20 S.stipitis:82

H3AY28              	100.00%		A3LVN8              	100.00%
Bootstrap support for H3AY28 as seed ortholog is 56%.
Alternative seed ortholog is H3AC03 (20 bits away from this cluster)
Bootstrap support for A3LVN8 as seed ortholog is 100%.

Group of orthologs #1791. Best score 82 bits
Score difference with first non-orthologous sequence - L.chalumnae:82 S.stipitis:82

H3B9K8              	100.00%		A3LVZ4              	100.00%
Bootstrap support for H3B9K8 as seed ortholog is 100%.
Bootstrap support for A3LVZ4 as seed ortholog is 100%.

Group of orthologs #1792. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 S.stipitis:81

M3XII0              	100.00%		A3GFC2              	100.00%
H3AMX9              	60.41%		
H3AA30              	55.35%		
H3ABD5              	18.76%		
H2ZX57              	17.72%		
Bootstrap support for M3XII0 as seed ortholog is 100%.
Bootstrap support for A3GFC2 as seed ortholog is 100%.

Group of orthologs #1793. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 S.stipitis:81

H3AA71              	100.00%		A3LXC9              	100.00%
H3B1P4              	45.11%		
Bootstrap support for H3AA71 as seed ortholog is 100%.
Bootstrap support for A3LXC9 as seed ortholog is 100%.

Group of orthologs #1794. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 S.stipitis:81

H3B3N2              	100.00%		A3LN36              	100.00%
H3AQ43              	34.00%		
Bootstrap support for H3B3N2 as seed ortholog is 100%.
Bootstrap support for A3LN36 as seed ortholog is 100%.

Group of orthologs #1795. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:29 S.stipitis:81

H2ZZC6              	100.00%		A3LVF3              	100.00%
Bootstrap support for H2ZZC6 as seed ortholog is 93%.
Bootstrap support for A3LVF3 as seed ortholog is 100%.

Group of orthologs #1796. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 S.stipitis:81

H3B6N8              	100.00%		A3GFG6              	100.00%
Bootstrap support for H3B6N8 as seed ortholog is 100%.
Bootstrap support for A3GFG6 as seed ortholog is 100%.

Group of orthologs #1797. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 S.stipitis:81

H3ASN4              	100.00%		A3LX96              	100.00%
Bootstrap support for H3ASN4 as seed ortholog is 100%.
Bootstrap support for A3LX96 as seed ortholog is 100%.

Group of orthologs #1798. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 S.stipitis:81

H3B380              	100.00%		A3LPM0              	100.00%
Bootstrap support for H3B380 as seed ortholog is 100%.
Bootstrap support for A3LPM0 as seed ortholog is 100%.

Group of orthologs #1799. Best score 81 bits
Score difference with first non-orthologous sequence - L.chalumnae:81 S.stipitis:81

M3XH57              	100.00%		A3LN27              	100.00%
Bootstrap support for M3XH57 as seed ortholog is 100%.
Bootstrap support for A3LN27 as seed ortholog is 100%.

Group of orthologs #1800. Best score 80 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 S.stipitis:80

M3XJM0              	100.00%		A3LSR0              	100.00%
                    	       		A3LUG7              	31.55%
                    	       		A3LWZ8              	20.00%
Bootstrap support for M3XJM0 as seed ortholog is 100%.
Bootstrap support for A3LSR0 as seed ortholog is 100%.

Group of orthologs #1801. Best score 80 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 S.stipitis:80

H2ZXN6              	100.00%		A3LP80              	100.00%
H3A7D1              	43.32%		
Bootstrap support for H2ZXN6 as seed ortholog is 100%.
Bootstrap support for A3LP80 as seed ortholog is 100%.

Group of orthologs #1802. Best score 80 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 S.stipitis:80

H3A390              	100.00%		A3GI10              	100.00%
Bootstrap support for H3A390 as seed ortholog is 100%.
Bootstrap support for A3GI10 as seed ortholog is 100%.

Group of orthologs #1803. Best score 80 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 S.stipitis:80

H3AQK0              	100.00%		A3GGH4              	100.00%
Bootstrap support for H3AQK0 as seed ortholog is 100%.
Bootstrap support for A3GGH4 as seed ortholog is 100%.

Group of orthologs #1804. Best score 80 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 S.stipitis:80

H3AQQ9              	100.00%		A3LTN9              	100.00%
Bootstrap support for H3AQQ9 as seed ortholog is 100%.
Bootstrap support for A3LTN9 as seed ortholog is 100%.

Group of orthologs #1805. Best score 80 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 S.stipitis:80

H3BDL0              	100.00%		A3M0H5              	100.00%
Bootstrap support for H3BDL0 as seed ortholog is 100%.
Bootstrap support for A3M0H5 as seed ortholog is 100%.

Group of orthologs #1806. Best score 80 bits
Score difference with first non-orthologous sequence - L.chalumnae:80 S.stipitis:80

M3XHD0              	100.00%		A3LWP7              	100.00%
Bootstrap support for M3XHD0 as seed ortholog is 100%.
Bootstrap support for A3LWP7 as seed ortholog is 100%.

Group of orthologs #1807. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 S.stipitis:79

H3ADM4              	100.00%		A3LZE5              	100.00%
H3BA63              	55.65%		A3LUT9              	46.40%
H3AME7              	53.42%		
Bootstrap support for H3ADM4 as seed ortholog is 100%.
Bootstrap support for A3LZE5 as seed ortholog is 100%.

Group of orthologs #1808. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 S.stipitis:79

H3AW30              	100.00%		A3LQJ9              	100.00%
                    	       		A3LSB6              	55.41%
                    	       		A3LUX6              	36.76%
Bootstrap support for H3AW30 as seed ortholog is 100%.
Bootstrap support for A3LQJ9 as seed ortholog is 100%.

Group of orthologs #1809. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 S.stipitis:79

H3B2T4              	100.00%		A3LTL2              	100.00%
H3AF68              	97.74%		
H3A460              	39.55%		
Bootstrap support for H3B2T4 as seed ortholog is 100%.
Bootstrap support for A3LTL2 as seed ortholog is 100%.

Group of orthologs #1810. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 S.stipitis:79

H3AWP5              	100.00%		A3LRD9              	100.00%
H3APQ0              	29.37%		
Bootstrap support for H3AWP5 as seed ortholog is 100%.
Bootstrap support for A3LRD9 as seed ortholog is 100%.

Group of orthologs #1811. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 S.stipitis:79

H2ZT34              	100.00%		A3GGB5              	100.00%
Bootstrap support for H2ZT34 as seed ortholog is 100%.
Bootstrap support for A3GGB5 as seed ortholog is 100%.

Group of orthologs #1812. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 S.stipitis:79

H3AIA8              	100.00%		A3GGY3              	100.00%
Bootstrap support for H3AIA8 as seed ortholog is 100%.
Bootstrap support for A3GGY3 as seed ortholog is 100%.

Group of orthologs #1813. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 S.stipitis:79

H3AR72              	100.00%		A3M0L4              	100.00%
Bootstrap support for H3AR72 as seed ortholog is 100%.
Bootstrap support for A3M0L4 as seed ortholog is 100%.

Group of orthologs #1814. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 S.stipitis:79

H3BCW8              	100.00%		A3LW16              	100.00%
Bootstrap support for H3BCW8 as seed ortholog is 100%.
Bootstrap support for A3LW16 as seed ortholog is 100%.

Group of orthologs #1815. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 S.stipitis:79

H3BE01              	100.00%		A3LWI6              	100.00%
Bootstrap support for H3BE01 as seed ortholog is 100%.
Bootstrap support for A3LWI6 as seed ortholog is 100%.

Group of orthologs #1816. Best score 79 bits
Score difference with first non-orthologous sequence - L.chalumnae:79 S.stipitis:79

M3XKT3              	100.00%		A3LX93              	100.00%
Bootstrap support for M3XKT3 as seed ortholog is 100%.
Bootstrap support for A3LX93 as seed ortholog is 100%.

Group of orthologs #1817. Best score 78 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 S.stipitis:78

H3A7H4              	100.00%		A3GGT6              	100.00%
Bootstrap support for H3A7H4 as seed ortholog is 100%.
Bootstrap support for A3GGT6 as seed ortholog is 100%.

Group of orthologs #1818. Best score 78 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 S.stipitis:78

H3A4G2              	100.00%		A3LXN6              	100.00%
Bootstrap support for H3A4G2 as seed ortholog is 100%.
Bootstrap support for A3LXN6 as seed ortholog is 100%.

Group of orthologs #1819. Best score 78 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 S.stipitis:78

H3ASU4              	100.00%		A3LN93              	100.00%
Bootstrap support for H3ASU4 as seed ortholog is 100%.
Bootstrap support for A3LN93 as seed ortholog is 100%.

Group of orthologs #1820. Best score 78 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 S.stipitis:78

H3B135              	100.00%		A3LPB8              	100.00%
Bootstrap support for H3B135 as seed ortholog is 100%.
Bootstrap support for A3LPB8 as seed ortholog is 100%.

Group of orthologs #1821. Best score 78 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 S.stipitis:78

H3ATN5              	100.00%		A3LXX4              	100.00%
Bootstrap support for H3ATN5 as seed ortholog is 100%.
Bootstrap support for A3LXX4 as seed ortholog is 100%.

Group of orthologs #1822. Best score 78 bits
Score difference with first non-orthologous sequence - L.chalumnae:78 S.stipitis:78

H3B5B2              	100.00%		A3LVW6              	100.00%
Bootstrap support for H3B5B2 as seed ortholog is 100%.
Bootstrap support for A3LVW6 as seed ortholog is 100%.

Group of orthologs #1823. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 S.stipitis:77

H3AVS8              	100.00%		A3LZC4              	100.00%
                    	       		A3LZ89              	8.13%
Bootstrap support for H3AVS8 as seed ortholog is 100%.
Bootstrap support for A3LZC4 as seed ortholog is 100%.

Group of orthologs #1824. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 S.stipitis:77

H2ZXJ0              	100.00%		A3LP95              	100.00%
Bootstrap support for H2ZXJ0 as seed ortholog is 100%.
Bootstrap support for A3LP95 as seed ortholog is 100%.

Group of orthologs #1825. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 S.stipitis:77

H3A8T8              	100.00%		A3GFM5              	100.00%
Bootstrap support for H3A8T8 as seed ortholog is 100%.
Bootstrap support for A3GFM5 as seed ortholog is 100%.

Group of orthologs #1826. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 S.stipitis:77

H3A934              	100.00%		A3GH20              	100.00%
Bootstrap support for H3A934 as seed ortholog is 100%.
Bootstrap support for A3GH20 as seed ortholog is 100%.

Group of orthologs #1827. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 S.stipitis:77

H3A0F6              	100.00%		A3LZ07              	100.00%
Bootstrap support for H3A0F6 as seed ortholog is 100%.
Bootstrap support for A3LZ07 as seed ortholog is 100%.

Group of orthologs #1828. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 S.stipitis:77

H3API7              	100.00%		A3LQ61              	100.00%
Bootstrap support for H3API7 as seed ortholog is 100%.
Bootstrap support for A3LQ61 as seed ortholog is 100%.

Group of orthologs #1829. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 S.stipitis:77

H3AHZ8              	100.00%		A3LYE7              	100.00%
Bootstrap support for H3AHZ8 as seed ortholog is 100%.
Bootstrap support for A3LYE7 as seed ortholog is 100%.

Group of orthologs #1830. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 S.stipitis:77

H3AJF2              	100.00%		A3LXG4              	100.00%
Bootstrap support for H3AJF2 as seed ortholog is 100%.
Bootstrap support for A3LXG4 as seed ortholog is 100%.

Group of orthologs #1831. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 S.stipitis:22

H3AM14              	100.00%		A3LVR1              	100.00%
Bootstrap support for H3AM14 as seed ortholog is 100%.
Bootstrap support for A3LVR1 as seed ortholog is 69%.
Alternative seed ortholog is A3GEV3 (22 bits away from this cluster)

Group of orthologs #1832. Best score 77 bits
Score difference with first non-orthologous sequence - L.chalumnae:77 S.stipitis:77

H3AM51              	100.00%		A3LW30              	100.00%
Bootstrap support for H3AM51 as seed ortholog is 100%.
Bootstrap support for A3LW30 as seed ortholog is 100%.

Group of orthologs #1833. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 S.stipitis:76

H2ZTD5              	100.00%		A3LV64              	100.00%
                    	       		A3LV73              	25.90%
Bootstrap support for H2ZTD5 as seed ortholog is 100%.
Bootstrap support for A3LV64 as seed ortholog is 100%.

Group of orthologs #1834. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 S.stipitis:76

H3A569              	100.00%		A3M0I5              	100.00%
Bootstrap support for H3A569 as seed ortholog is 100%.
Bootstrap support for A3M0I5 as seed ortholog is 100%.

Group of orthologs #1835. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:8 S.stipitis:76

H3ABD0              	100.00%		A3LZE3              	100.00%
Bootstrap support for H3ABD0 as seed ortholog is 40%.
Alternative seed ortholog is H3B2D0 (8 bits away from this cluster)
Bootstrap support for A3LZE3 as seed ortholog is 100%.

Group of orthologs #1836. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 S.stipitis:76

H3AIJ0              	100.00%		A3LYF8              	100.00%
Bootstrap support for H3AIJ0 as seed ortholog is 100%.
Bootstrap support for A3LYF8 as seed ortholog is 100%.

Group of orthologs #1837. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:31 S.stipitis:34

H3AZ04              	100.00%		A3LMU9              	100.00%
Bootstrap support for H3AZ04 as seed ortholog is 77%.
Bootstrap support for A3LMU9 as seed ortholog is 80%.

Group of orthologs #1838. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 S.stipitis:76

H3ASQ1              	100.00%		A3LVL6              	100.00%
Bootstrap support for H3ASQ1 as seed ortholog is 100%.
Bootstrap support for A3LVL6 as seed ortholog is 100%.

Group of orthologs #1839. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 S.stipitis:76

H3BBL8              	100.00%		A3GFM6              	100.00%
Bootstrap support for H3BBL8 as seed ortholog is 100%.
Bootstrap support for A3GFM6 as seed ortholog is 100%.

Group of orthologs #1840. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 S.stipitis:76

H3B591              	100.00%		A3LS54              	100.00%
Bootstrap support for H3B591 as seed ortholog is 100%.
Bootstrap support for A3LS54 as seed ortholog is 100%.

Group of orthologs #1841. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 S.stipitis:76

H3B8N7              	100.00%		A3LXJ8              	100.00%
Bootstrap support for H3B8N7 as seed ortholog is 100%.
Bootstrap support for A3LXJ8 as seed ortholog is 100%.

Group of orthologs #1842. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:76 S.stipitis:76

H3BEP6              	100.00%		A3LU03              	100.00%
Bootstrap support for H3BEP6 as seed ortholog is 100%.
Bootstrap support for A3LU03 as seed ortholog is 100%.

Group of orthologs #1843. Best score 76 bits
Score difference with first non-orthologous sequence - L.chalumnae:28 S.stipitis:76

H3BGG3              	100.00%		A3LV38              	100.00%
Bootstrap support for H3BGG3 as seed ortholog is 99%.
Bootstrap support for A3LV38 as seed ortholog is 100%.

Group of orthologs #1844. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 S.stipitis:75

H3A4F9              	100.00%		A3GI71              	100.00%
M3XKJ8              	10.46%		
Bootstrap support for H3A4F9 as seed ortholog is 100%.
Bootstrap support for A3GI71 as seed ortholog is 100%.

Group of orthologs #1845. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 S.stipitis:75

H2ZVR5              	100.00%		A3M008              	100.00%
H3AJ45              	7.05%		
Bootstrap support for H2ZVR5 as seed ortholog is 100%.
Bootstrap support for A3M008 as seed ortholog is 100%.

Group of orthologs #1846. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 S.stipitis:75

H3A014              	100.00%		A3LND5              	100.00%
Bootstrap support for H3A014 as seed ortholog is 100%.
Bootstrap support for A3LND5 as seed ortholog is 100%.

Group of orthologs #1847. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 S.stipitis:75

H3A2P6              	100.00%		A3LQ44              	100.00%
Bootstrap support for H3A2P6 as seed ortholog is 100%.
Bootstrap support for A3LQ44 as seed ortholog is 100%.

Group of orthologs #1848. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 S.stipitis:75

H3A475              	100.00%		A3LPG7              	100.00%
Bootstrap support for H3A475 as seed ortholog is 100%.
Bootstrap support for A3LPG7 as seed ortholog is 100%.

Group of orthologs #1849. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 S.stipitis:75

H3AI35              	100.00%		A3LZH6              	100.00%
Bootstrap support for H3AI35 as seed ortholog is 100%.
Bootstrap support for A3LZH6 as seed ortholog is 100%.

Group of orthologs #1850. Best score 75 bits
Score difference with first non-orthologous sequence - L.chalumnae:75 S.stipitis:75

H3B8W7              	100.00%		A3GHH3              	100.00%
Bootstrap support for H3B8W7 as seed ortholog is 100%.
Bootstrap support for A3GHH3 as seed ortholog is 100%.

Group of orthologs #1851. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 S.stipitis:74

H3AHZ2              	100.00%		A3LRD8              	100.00%
H3AXH4              	76.20%		A3LV20              	43.04%
H3AC81              	70.86%		
Bootstrap support for H3AHZ2 as seed ortholog is 100%.
Bootstrap support for A3LRD8 as seed ortholog is 100%.

Group of orthologs #1852. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 S.stipitis:74

H3A073              	100.00%		A3M0F4              	100.00%
Bootstrap support for H3A073 as seed ortholog is 100%.
Bootstrap support for A3M0F4 as seed ortholog is 100%.

Group of orthologs #1853. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 S.stipitis:74

H3AVG4              	100.00%		A3GFI9              	100.00%
Bootstrap support for H3AVG4 as seed ortholog is 100%.
Bootstrap support for A3GFI9 as seed ortholog is 100%.

Group of orthologs #1854. Best score 74 bits
Score difference with first non-orthologous sequence - L.chalumnae:74 S.stipitis:74

M3XLH2              	100.00%		A3LWI1              	100.00%
Bootstrap support for M3XLH2 as seed ortholog is 100%.
Bootstrap support for A3LWI1 as seed ortholog is 100%.

Group of orthologs #1855. Best score 73 bits
Score difference with first non-orthologous sequence - L.chalumnae:73 S.stipitis:73

H3A8G2              	100.00%		A3LWV3              	100.00%
Bootstrap support for H3A8G2 as seed ortholog is 100%.
Bootstrap support for A3LWV3 as seed ortholog is 100%.

Group of orthologs #1856. Best score 73 bits
Score difference with first non-orthologous sequence - L.chalumnae:73 S.stipitis:73

H3ALD8              	100.00%		A3LSR8              	100.00%
Bootstrap support for H3ALD8 as seed ortholog is 100%.
Bootstrap support for A3LSR8 as seed ortholog is 100%.

Group of orthologs #1857. Best score 73 bits
Score difference with first non-orthologous sequence - L.chalumnae:73 S.stipitis:73

H3AV50              	100.00%		A3LXN4              	100.00%
Bootstrap support for H3AV50 as seed ortholog is 100%.
Bootstrap support for A3LXN4 as seed ortholog is 100%.

Group of orthologs #1858. Best score 73 bits
Score difference with first non-orthologous sequence - L.chalumnae:73 S.stipitis:73

M3XJ30              	100.00%		A3LMW6              	100.00%
Bootstrap support for M3XJ30 as seed ortholog is 100%.
Bootstrap support for A3LMW6 as seed ortholog is 100%.

Group of orthologs #1859. Best score 73 bits
Score difference with first non-orthologous sequence - L.chalumnae:73 S.stipitis:73

M3XIF7              	100.00%		A3LND7              	100.00%
Bootstrap support for M3XIF7 as seed ortholog is 100%.
Bootstrap support for A3LND7 as seed ortholog is 100%.

Group of orthologs #1860. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:4 S.stipitis:72

H3BAP5              	100.00%		A3LWK5              	100.00%
H3A5Q6              	45.07%		
H3AZH5              	10.55%		
H2ZW36              	6.44%		
Bootstrap support for H3BAP5 as seed ortholog is 50%.
Alternative seed ortholog is H3APW5 (4 bits away from this cluster)
Bootstrap support for A3LWK5 as seed ortholog is 100%.

Group of orthologs #1861. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 S.stipitis:72

H2ZYK5              	100.00%		A3M083              	100.00%
H3BAJ4              	95.83%		
H3ARZ2              	35.83%		
Bootstrap support for H2ZYK5 as seed ortholog is 100%.
Bootstrap support for A3M083 as seed ortholog is 100%.

Group of orthologs #1862. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 S.stipitis:72

H3ATV1              	100.00%		A3LYG3              	100.00%
H3A0Q3              	21.17%		
Bootstrap support for H3ATV1 as seed ortholog is 100%.
Bootstrap support for A3LYG3 as seed ortholog is 100%.

Group of orthologs #1863. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 S.stipitis:72

H3A287              	100.00%		A3GIA3              	100.00%
Bootstrap support for H3A287 as seed ortholog is 100%.
Bootstrap support for A3GIA3 as seed ortholog is 100%.

Group of orthologs #1864. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 S.stipitis:72

H3ANR6              	100.00%		A3LVB8              	100.00%
Bootstrap support for H3ANR6 as seed ortholog is 100%.
Bootstrap support for A3LVB8 as seed ortholog is 100%.

Group of orthologs #1865. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 S.stipitis:72

H3AYR6              	100.00%		A3LQI8              	100.00%
Bootstrap support for H3AYR6 as seed ortholog is 100%.
Bootstrap support for A3LQI8 as seed ortholog is 100%.

Group of orthologs #1866. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 S.stipitis:72

H3ASK4              	100.00%		A3LYN7              	100.00%
Bootstrap support for H3ASK4 as seed ortholog is 100%.
Bootstrap support for A3LYN7 as seed ortholog is 100%.

Group of orthologs #1867. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 S.stipitis:72

H3B3A3              	100.00%		A3LWI5              	100.00%
Bootstrap support for H3B3A3 as seed ortholog is 100%.
Bootstrap support for A3LWI5 as seed ortholog is 100%.

Group of orthologs #1868. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 S.stipitis:72

H3B650              	100.00%		A3LVA6              	100.00%
Bootstrap support for H3B650 as seed ortholog is 100%.
Bootstrap support for A3LVA6 as seed ortholog is 100%.

Group of orthologs #1869. Best score 72 bits
Score difference with first non-orthologous sequence - L.chalumnae:72 S.stipitis:72

H3BCV8              	100.00%		A3LYC1              	100.00%
Bootstrap support for H3BCV8 as seed ortholog is 100%.
Bootstrap support for A3LYC1 as seed ortholog is 100%.

Group of orthologs #1870. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 S.stipitis:19

H3A2G0              	100.00%		A3LUF2              	100.00%
H3B7U1              	13.60%		A3LUF3              	24.03%
H3B1D9              	11.73%		A3GI47              	12.21%
H3AF82              	11.14%		A3GFR8              	10.55%
H2ZTA3              	7.70%		A3GFZ2              	9.20%
                    	       		A3LV35              	8.96%
                    	       		A3GI97              	8.01%
                    	       		A3GI96              	7.53%
Bootstrap support for H3A2G0 as seed ortholog is 100%.
Bootstrap support for A3LUF2 as seed ortholog is 67%.
Alternative seed ortholog is A3GH00 (19 bits away from this cluster)

Group of orthologs #1871. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 S.stipitis:71

M3XGG2              	100.00%		A3LTS2              	100.00%
M3XIR5              	60.36%		
M3XKN2              	6.76%		
Bootstrap support for M3XGG2 as seed ortholog is 100%.
Bootstrap support for A3LTS2 as seed ortholog is 100%.

Group of orthologs #1872. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 S.stipitis:71

H3ACZ1              	100.00%		A3LRN3              	100.00%
H3AR13              	5.07%		
Bootstrap support for H3ACZ1 as seed ortholog is 100%.
Bootstrap support for A3LRN3 as seed ortholog is 100%.

Group of orthologs #1873. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 S.stipitis:71

H3AT28              	100.00%		A3LZN0              	100.00%
H3AML0              	25.10%		
Bootstrap support for H3AT28 as seed ortholog is 100%.
Bootstrap support for A3LZN0 as seed ortholog is 100%.

Group of orthologs #1874. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 S.stipitis:71

H2ZVM5              	100.00%		A3GI31              	100.00%
Bootstrap support for H2ZVM5 as seed ortholog is 100%.
Bootstrap support for A3GI31 as seed ortholog is 100%.

Group of orthologs #1875. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 S.stipitis:71

H3AHQ0              	100.00%		A3LQZ5              	100.00%
Bootstrap support for H3AHQ0 as seed ortholog is 100%.
Bootstrap support for A3LQZ5 as seed ortholog is 100%.

Group of orthologs #1876. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 S.stipitis:71

H3AE44              	100.00%		A3LYA0              	100.00%
Bootstrap support for H3AE44 as seed ortholog is 100%.
Bootstrap support for A3LYA0 as seed ortholog is 100%.

Group of orthologs #1877. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 S.stipitis:71

H3AZ08              	100.00%		A3GG55              	100.00%
Bootstrap support for H3AZ08 as seed ortholog is 100%.
Bootstrap support for A3GG55 as seed ortholog is 100%.

Group of orthologs #1878. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 S.stipitis:71

H3BDT4              	100.00%		A3LPW8              	100.00%
Bootstrap support for H3BDT4 as seed ortholog is 100%.
Bootstrap support for A3LPW8 as seed ortholog is 100%.

Group of orthologs #1879. Best score 71 bits
Score difference with first non-orthologous sequence - L.chalumnae:71 S.stipitis:71

M3XJ92              	100.00%		A3LQZ4              	100.00%
Bootstrap support for M3XJ92 as seed ortholog is 100%.
Bootstrap support for A3LQZ4 as seed ortholog is 100%.

Group of orthologs #1880. Best score 70 bits
Score difference with first non-orthologous sequence - L.chalumnae:70 S.stipitis:70

H3AZ94              	100.00%		A3LTM3              	100.00%
H3AKZ3              	44.86%		
H3B5Y8              	26.44%		
H3ANY5              	20.13%		
H3B051              	19.95%		
H3APL3              	14.80%		
H3B7S8              	11.19%		
H3A1N5              	10.56%		
H3AMT1              	6.86%		
Bootstrap support for H3AZ94 as seed ortholog is 100%.
Bootstrap support for A3LTM3 as seed ortholog is 100%.

Group of orthologs #1881. Best score 70 bits
Score difference with first non-orthologous sequence - L.chalumnae:70 S.stipitis:70

H3ARG8              	100.00%		A3GF19              	100.00%
H3AEU6              	66.28%		
H2ZUS3              	28.91%		
H3B854              	18.59%		
Bootstrap support for H3ARG8 as seed ortholog is 100%.
Bootstrap support for A3GF19 as seed ortholog is 100%.

Group of orthologs #1882. Best score 70 bits
Score difference with first non-orthologous sequence - L.chalumnae:70 S.stipitis:70

H2ZSP1              	100.00%		A3GH85              	100.00%
H3BD58              	36.87%		
Bootstrap support for H2ZSP1 as seed ortholog is 100%.
Bootstrap support for A3GH85 as seed ortholog is 100%.

Group of orthologs #1883. Best score 70 bits
Score difference with first non-orthologous sequence - L.chalumnae:70 S.stipitis:70

H3AJQ9              	100.00%		A3LTH2              	100.00%
H3A883              	28.09%		
Bootstrap support for H3AJQ9 as seed ortholog is 100%.
Bootstrap support for A3LTH2 as seed ortholog is 100%.

Group of orthologs #1884. Best score 70 bits
Score difference with first non-orthologous sequence - L.chalumnae:70 S.stipitis:70

H3BHX1              	100.00%		A3LUW9              	100.00%
H2ZXH9              	13.42%		
Bootstrap support for H3BHX1 as seed ortholog is 100%.
Bootstrap support for A3LUW9 as seed ortholog is 100%.

Group of orthologs #1885. Best score 70 bits
Score difference with first non-orthologous sequence - L.chalumnae:70 S.stipitis:70

H3A610              	100.00%		A3LX41              	100.00%
Bootstrap support for H3A610 as seed ortholog is 100%.
Bootstrap support for A3LX41 as seed ortholog is 100%.

Group of orthologs #1886. Best score 70 bits
Score difference with first non-orthologous sequence - L.chalumnae:9 S.stipitis:29

H3A7J9              	100.00%		A3LYY7              	100.00%
Bootstrap support for H3A7J9 as seed ortholog is 60%.
Alternative seed ortholog is H3B355 (9 bits away from this cluster)
Bootstrap support for A3LYY7 as seed ortholog is 91%.

Group of orthologs #1887. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 S.stipitis:23

H2ZVN0              	100.00%		A3GEU9              	100.00%
H3A8Y3              	50.14%		A3LN56              	95.33%
Bootstrap support for H2ZVN0 as seed ortholog is 100%.
Bootstrap support for A3GEU9 as seed ortholog is 77%.

Group of orthologs #1888. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 S.stipitis:12

H3BFP2              	100.00%		A3GIB6              	100.00%
H3ANF9              	57.94%		
H3AGE4              	16.82%		
Bootstrap support for H3BFP2 as seed ortholog is 100%.
Bootstrap support for A3GIB6 as seed ortholog is 61%.
Alternative seed ortholog is A3LVI8 (12 bits away from this cluster)

Group of orthologs #1889. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 S.stipitis:69

H3A6F1              	100.00%		A3GF55              	100.00%
H3A8J0              	12.91%		
Bootstrap support for H3A6F1 as seed ortholog is 100%.
Bootstrap support for A3GF55 as seed ortholog is 100%.

Group of orthologs #1890. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 S.stipitis:69

H3BF47              	100.00%		A3GFN8              	100.00%
H3BH27              	100.00%		
Bootstrap support for H3BF47 as seed ortholog is 100%.
Bootstrap support for H3BH27 as seed ortholog is 100%.
Bootstrap support for A3GFN8 as seed ortholog is 100%.

Group of orthologs #1891. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 S.stipitis:69

H3A029              	100.00%		A3GIA9              	100.00%
Bootstrap support for H3A029 as seed ortholog is 100%.
Bootstrap support for A3GIA9 as seed ortholog is 100%.

Group of orthologs #1892. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 S.stipitis:69

H3AA34              	100.00%		A3LQ07              	100.00%
Bootstrap support for H3AA34 as seed ortholog is 100%.
Bootstrap support for A3LQ07 as seed ortholog is 100%.

Group of orthologs #1893. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 S.stipitis:69

H3AA68              	100.00%		A3LWG7              	100.00%
Bootstrap support for H3AA68 as seed ortholog is 100%.
Bootstrap support for A3LWG7 as seed ortholog is 100%.

Group of orthologs #1894. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 S.stipitis:69

H3A820              	100.00%		A3LZR9              	100.00%
Bootstrap support for H3A820 as seed ortholog is 100%.
Bootstrap support for A3LZR9 as seed ortholog is 100%.

Group of orthologs #1895. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 S.stipitis:69

H3AU07              	100.00%		A3GHC0              	100.00%
Bootstrap support for H3AU07 as seed ortholog is 100%.
Bootstrap support for A3GHC0 as seed ortholog is 100%.

Group of orthologs #1896. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 S.stipitis:69

H3APX0              	100.00%		A3M0B0              	100.00%
Bootstrap support for H3APX0 as seed ortholog is 100%.
Bootstrap support for A3M0B0 as seed ortholog is 100%.

Group of orthologs #1897. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 S.stipitis:69

H3AXF2              	100.00%		A3LTZ8              	100.00%
Bootstrap support for H3AXF2 as seed ortholog is 100%.
Bootstrap support for A3LTZ8 as seed ortholog is 100%.

Group of orthologs #1898. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 S.stipitis:6

H3BAV5              	100.00%		A3LPP1              	100.00%
Bootstrap support for H3BAV5 as seed ortholog is 100%.
Bootstrap support for A3LPP1 as seed ortholog is 54%.
Alternative seed ortholog is A3LRM0 (6 bits away from this cluster)

Group of orthologs #1899. Best score 69 bits
Score difference with first non-orthologous sequence - L.chalumnae:69 S.stipitis:69

M3XJY0              	100.00%		A3LQP6              	100.00%
Bootstrap support for M3XJY0 as seed ortholog is 100%.
Bootstrap support for A3LQP6 as seed ortholog is 100%.

Group of orthologs #1900. Best score 68 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 S.stipitis:68

H2ZWK5              	100.00%		A3LRN8              	100.00%
H3BEL7              	73.83%		
H3A5U7              	68.40%		
H2ZXV7              	63.83%		
H3A8P7              	21.91%		
H3A927              	21.70%		
H3A1E3              	19.89%		
H3B362              	19.57%		
H2ZY22              	19.04%		
H3A6Y0              	18.09%		
H3B7L0              	18.09%		
H3ARX0              	16.28%		
H3AF17              	15.96%		
H3BEN4              	15.85%		
H3AH25              	15.85%		
H2ZY19              	15.43%		
H2ZT93              	15.43%		
H3B6R6              	15.11%		
H3AZN4              	14.57%		
H3AQ33              	13.40%		
H3AUI6              	12.87%		
H2ZTQ3              	12.23%		
H2ZWC6              	12.23%		
H3B013              	10.85%		
H3B8Q5              	10.85%		
H3ARV4              	10.64%		
H3AT69              	10.43%		
H3ADV8              	10.11%		
H3A803              	9.68%		
H3AY07              	8.09%		
H3AJ56              	6.81%		
H3B6J7              	6.17%		
H2ZZF9              	5.85%		
H2ZVP3              	5.53%		
H2ZYZ9              	5.32%		
Bootstrap support for H2ZWK5 as seed ortholog is 100%.
Bootstrap support for A3LRN8 as seed ortholog is 100%.

Group of orthologs #1901. Best score 68 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 S.stipitis:68

H3BBF8              	100.00%		A3LMZ0              	100.00%
H3BEF3              	77.27%		
Bootstrap support for H3BBF8 as seed ortholog is 100%.
Bootstrap support for A3LMZ0 as seed ortholog is 100%.

Group of orthologs #1902. Best score 68 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 S.stipitis:68

H3BGA6              	100.00%		A3LXX7              	100.00%
H3A5W4              	61.78%		
Bootstrap support for H3BGA6 as seed ortholog is 100%.
Bootstrap support for A3LXX7 as seed ortholog is 100%.

Group of orthologs #1903. Best score 68 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 S.stipitis:8

H2ZZD8              	100.00%		A3GGM9              	100.00%
Bootstrap support for H2ZZD8 as seed ortholog is 100%.
Bootstrap support for A3GGM9 as seed ortholog is 66%.
Alternative seed ortholog is A3GG97 (8 bits away from this cluster)

Group of orthologs #1904. Best score 68 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 S.stipitis:68

H3A8S5              	100.00%		A3LPI5              	100.00%
Bootstrap support for H3A8S5 as seed ortholog is 100%.
Bootstrap support for A3LPI5 as seed ortholog is 100%.

Group of orthologs #1905. Best score 68 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 S.stipitis:68

H3AW97              	100.00%		A3GFL1              	100.00%
Bootstrap support for H3AW97 as seed ortholog is 100%.
Bootstrap support for A3GFL1 as seed ortholog is 100%.

Group of orthologs #1906. Best score 68 bits
Score difference with first non-orthologous sequence - L.chalumnae:68 S.stipitis:68

M3XHQ4              	100.00%		A3LQH2              	100.00%
Bootstrap support for M3XHQ4 as seed ortholog is 100%.
Bootstrap support for A3LQH2 as seed ortholog is 100%.

Group of orthologs #1907. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 S.stipitis:67

H3A9B0              	100.00%		A3LRQ0              	100.00%
H2ZXY1              	50.97%		A3LX05              	64.61%
H3AM95              	39.43%		A3GI43              	63.64%
Bootstrap support for H3A9B0 as seed ortholog is 100%.
Bootstrap support for A3LRQ0 as seed ortholog is 100%.

Group of orthologs #1908. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:5 S.stipitis:67

H3AAD3              	100.00%		A3LXU2              	100.00%
H3A8Z2              	44.89%		
Bootstrap support for H3AAD3 as seed ortholog is 60%.
Alternative seed ortholog is H3BAX9 (5 bits away from this cluster)
Bootstrap support for A3LXU2 as seed ortholog is 100%.

Group of orthologs #1909. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:8 S.stipitis:67

H3A4W0              	100.00%		A3LU06              	100.00%
Bootstrap support for H3A4W0 as seed ortholog is 61%.
Alternative seed ortholog is H3AH08 (8 bits away from this cluster)
Bootstrap support for A3LU06 as seed ortholog is 100%.

Group of orthologs #1910. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 S.stipitis:67

H3A093              	100.00%		A3LYC8              	100.00%
Bootstrap support for H3A093 as seed ortholog is 100%.
Bootstrap support for A3LYC8 as seed ortholog is 100%.

Group of orthologs #1911. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 S.stipitis:67

H3AIG5              	100.00%		A3LPM5              	100.00%
Bootstrap support for H3AIG5 as seed ortholog is 100%.
Bootstrap support for A3LPM5 as seed ortholog is 100%.

Group of orthologs #1912. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 S.stipitis:67

H3ANK0              	100.00%		A3LNV5              	100.00%
Bootstrap support for H3ANK0 as seed ortholog is 100%.
Bootstrap support for A3LNV5 as seed ortholog is 100%.

Group of orthologs #1913. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 S.stipitis:67

H3APL2              	100.00%		A3LNT0              	100.00%
Bootstrap support for H3APL2 as seed ortholog is 100%.
Bootstrap support for A3LNT0 as seed ortholog is 100%.

Group of orthologs #1914. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 S.stipitis:67

H3AV09              	100.00%		A3LTX1              	100.00%
Bootstrap support for H3AV09 as seed ortholog is 100%.
Bootstrap support for A3LTX1 as seed ortholog is 100%.

Group of orthologs #1915. Best score 67 bits
Score difference with first non-orthologous sequence - L.chalumnae:67 S.stipitis:67

H3BA32              	100.00%		A3LUD8              	100.00%
Bootstrap support for H3BA32 as seed ortholog is 100%.
Bootstrap support for A3LUD8 as seed ortholog is 100%.

Group of orthologs #1916. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 S.stipitis:66

H2ZZB8              	100.00%		A3LVP7              	100.00%
H3BBH1              	27.90%		
H3A5J3              	15.80%		
Bootstrap support for H2ZZB8 as seed ortholog is 100%.
Bootstrap support for A3LVP7 as seed ortholog is 100%.

Group of orthologs #1917. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 S.stipitis:66

H3AG90              	100.00%		A3LVC0              	100.00%
H3BI65              	41.71%		
H3B5Q9              	41.47%		
Bootstrap support for H3AG90 as seed ortholog is 100%.
Bootstrap support for A3LVC0 as seed ortholog is 100%.

Group of orthologs #1918. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 S.stipitis:66

H3AXG6              	100.00%		A3LYM5              	100.00%
H3AMI3              	18.40%		
Bootstrap support for H3AXG6 as seed ortholog is 100%.
Bootstrap support for A3LYM5 as seed ortholog is 100%.

Group of orthologs #1919. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:6 S.stipitis:66

H3B4H2              	100.00%		A3LWF7              	100.00%
H3BCI7              	49.55%		
Bootstrap support for H3B4H2 as seed ortholog is 51%.
Alternative seed ortholog is H3BCJ2 (6 bits away from this cluster)
Bootstrap support for A3LWF7 as seed ortholog is 100%.

Group of orthologs #1920. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 S.stipitis:66

H2ZUS9              	100.00%		A3LUL7              	100.00%
Bootstrap support for H2ZUS9 as seed ortholog is 100%.
Bootstrap support for A3LUL7 as seed ortholog is 100%.

Group of orthologs #1921. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 S.stipitis:66

H3AFW2              	100.00%		A3LPB7              	100.00%
Bootstrap support for H3AFW2 as seed ortholog is 100%.
Bootstrap support for A3LPB7 as seed ortholog is 100%.

Group of orthologs #1922. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 S.stipitis:66

H3AAS6              	100.00%		A3LY28              	100.00%
Bootstrap support for H3AAS6 as seed ortholog is 100%.
Bootstrap support for A3LY28 as seed ortholog is 100%.

Group of orthologs #1923. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 S.stipitis:66

H3AJ23              	100.00%		A3LU61              	100.00%
Bootstrap support for H3AJ23 as seed ortholog is 100%.
Bootstrap support for A3LU61 as seed ortholog is 100%.

Group of orthologs #1924. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 S.stipitis:66

H3ATI4              	100.00%		A3LPQ8              	100.00%
Bootstrap support for H3ATI4 as seed ortholog is 100%.
Bootstrap support for A3LPQ8 as seed ortholog is 100%.

Group of orthologs #1925. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 S.stipitis:66

H3ALH2              	100.00%		A3LX28              	100.00%
Bootstrap support for H3ALH2 as seed ortholog is 100%.
Bootstrap support for A3LX28 as seed ortholog is 100%.

Group of orthologs #1926. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 S.stipitis:66

H3B0G2              	100.00%		A3LNY0              	100.00%
Bootstrap support for H3B0G2 as seed ortholog is 100%.
Bootstrap support for A3LNY0 as seed ortholog is 100%.

Group of orthologs #1927. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 S.stipitis:66

H3BA70              	100.00%		A3GFU0              	100.00%
Bootstrap support for H3BA70 as seed ortholog is 100%.
Bootstrap support for A3GFU0 as seed ortholog is 100%.

Group of orthologs #1928. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 S.stipitis:66

H3B7E9              	100.00%		A3LN98              	100.00%
Bootstrap support for H3B7E9 as seed ortholog is 100%.
Bootstrap support for A3LN98 as seed ortholog is 100%.

Group of orthologs #1929. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 S.stipitis:66

H3AZ54              	100.00%		A3LZ85              	100.00%
Bootstrap support for H3AZ54 as seed ortholog is 100%.
Bootstrap support for A3LZ85 as seed ortholog is 100%.

Group of orthologs #1930. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 S.stipitis:66

H3B2U5              	100.00%		A3LZW1              	100.00%
Bootstrap support for H3B2U5 as seed ortholog is 100%.
Bootstrap support for A3LZW1 as seed ortholog is 100%.

Group of orthologs #1931. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 S.stipitis:66

H3BB15              	100.00%		A3M0J1              	100.00%
Bootstrap support for H3BB15 as seed ortholog is 100%.
Bootstrap support for A3M0J1 as seed ortholog is 100%.

Group of orthologs #1932. Best score 66 bits
Score difference with first non-orthologous sequence - L.chalumnae:66 S.stipitis:66

H3BHV5              	100.00%		A3LY65              	100.00%
Bootstrap support for H3BHV5 as seed ortholog is 100%.
Bootstrap support for A3LY65 as seed ortholog is 100%.

Group of orthologs #1933. Best score 65 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 S.stipitis:65

H3B7K8              	100.00%		A3LR88              	100.00%
                    	       		A3GHX7              	6.15%
Bootstrap support for H3B7K8 as seed ortholog is 100%.
Bootstrap support for A3LR88 as seed ortholog is 100%.

Group of orthologs #1934. Best score 65 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 S.stipitis:65

H2ZRR9              	100.00%		A3LNN1              	100.00%
Bootstrap support for H2ZRR9 as seed ortholog is 100%.
Bootstrap support for A3LNN1 as seed ortholog is 100%.

Group of orthologs #1935. Best score 65 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 S.stipitis:65

H3A182              	100.00%		A3LQM6              	100.00%
Bootstrap support for H3A182 as seed ortholog is 100%.
Bootstrap support for A3LQM6 as seed ortholog is 100%.

Group of orthologs #1936. Best score 65 bits
Score difference with first non-orthologous sequence - L.chalumnae:65 S.stipitis:65

H3AFS0              	100.00%		A3LWV2              	100.00%
Bootstrap support for H3AFS0 as seed ortholog is 100%.
Bootstrap support for A3LWV2 as seed ortholog is 100%.

Group of orthologs #1937. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 S.stipitis:64

H3A2N7              	100.00%		A3LZX0              	100.00%
                    	       		A3LWH0              	48.23%
Bootstrap support for H3A2N7 as seed ortholog is 100%.
Bootstrap support for A3LZX0 as seed ortholog is 100%.

Group of orthologs #1938. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 S.stipitis:64

H3APZ5              	100.00%		A3LP94              	100.00%
H3AEJ8              	5.88%		
Bootstrap support for H3APZ5 as seed ortholog is 100%.
Bootstrap support for A3LP94 as seed ortholog is 100%.

Group of orthologs #1939. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 S.stipitis:64

H3ASQ5              	100.00%		A3LW61              	100.00%
                    	       		A3LYX9              	60.51%
Bootstrap support for H3ASQ5 as seed ortholog is 100%.
Bootstrap support for A3LW61 as seed ortholog is 100%.

Group of orthologs #1940. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 S.stipitis:64

H3B755              	100.00%		A3GHT4              	100.00%
H3AM83              	58.51%		
Bootstrap support for H3B755 as seed ortholog is 100%.
Bootstrap support for A3GHT4 as seed ortholog is 100%.

Group of orthologs #1941. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 S.stipitis:64

H2ZXL4              	100.00%		A3GEW3              	100.00%
Bootstrap support for H2ZXL4 as seed ortholog is 100%.
Bootstrap support for A3GEW3 as seed ortholog is 100%.

Group of orthologs #1942. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 S.stipitis:64

H3A3J2              	100.00%		A3LUY1              	100.00%
Bootstrap support for H3A3J2 as seed ortholog is 100%.
Bootstrap support for A3LUY1 as seed ortholog is 100%.

Group of orthologs #1943. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 S.stipitis:64

H3AMA2              	100.00%		A3LSH6              	100.00%
Bootstrap support for H3AMA2 as seed ortholog is 100%.
Bootstrap support for A3LSH6 as seed ortholog is 100%.

Group of orthologs #1944. Best score 64 bits
Score difference with first non-orthologous sequence - L.chalumnae:64 S.stipitis:64

H3BBQ7              	100.00%		A3LWW2              	100.00%
Bootstrap support for H3BBQ7 as seed ortholog is 100%.
Bootstrap support for A3LWW2 as seed ortholog is 100%.

Group of orthologs #1945. Best score 63 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 S.stipitis:63

H3B5E4              	100.00%		A3LN03              	100.00%
H3BDA4              	100.00%		A3LWM2              	100.00%
H3AF65              	63.91%		A3GG30              	29.81%
H3B8V3              	47.16%		
H3ASN8              	41.60%		
Bootstrap support for H3B5E4 as seed ortholog is 100%.
Bootstrap support for H3BDA4 as seed ortholog is 100%.
Bootstrap support for A3LN03 as seed ortholog is 100%.
Bootstrap support for A3LWM2 as seed ortholog is 100%.

Group of orthologs #1946. Best score 63 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 S.stipitis:63

H2ZYJ9              	100.00%		A3LUM3              	100.00%
H3AYM7              	20.60%		A3LU47              	34.38%
H3AKC0              	19.77%		A3LZN4              	11.84%
H3AAT6              	19.77%		
Bootstrap support for H2ZYJ9 as seed ortholog is 100%.
Bootstrap support for A3LUM3 as seed ortholog is 100%.

Group of orthologs #1947. Best score 63 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 S.stipitis:63

M3XJM6              	100.00%		A3LSN2              	100.00%
H3ASY6              	71.09%		
H3AWM4              	39.40%		
Bootstrap support for M3XJM6 as seed ortholog is 100%.
Bootstrap support for A3LSN2 as seed ortholog is 100%.

Group of orthologs #1948. Best score 63 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 S.stipitis:63

H3A3Z3              	100.00%		A3LXJ3              	100.00%
                    	       		A3LND9              	43.04%
Bootstrap support for H3A3Z3 as seed ortholog is 100%.
Bootstrap support for A3LXJ3 as seed ortholog is 100%.

Group of orthologs #1949. Best score 63 bits
Score difference with first non-orthologous sequence - L.chalumnae:63 S.stipitis:63

H3A6F9              	100.00%		A3LY50              	100.00%
Bootstrap support for H3A6F9 as seed ortholog is 100%.
Bootstrap support for A3LY50 as seed ortholog is 100%.

Group of orthologs #1950. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 S.stipitis:62

H3AST7              	100.00%		A3LWZ6              	100.00%
H3B4T4              	10.07%		
H3APX8              	6.96%		
H3AEA0              	6.74%		
H3B0U0              	6.66%		
H3A3V8              	6.66%		
H3AKJ5              	6.00%		
H3A3N8              	5.92%		
H3ARZ3              	5.77%		
H3AYE4              	5.55%		
H3AK18              	5.33%		
H3BAV4              	5.03%		
Bootstrap support for H3AST7 as seed ortholog is 100%.
Bootstrap support for A3LWZ6 as seed ortholog is 100%.

Group of orthologs #1951. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 S.stipitis:62

H3AIK3              	100.00%		A3GFW6              	100.00%
Bootstrap support for H3AIK3 as seed ortholog is 100%.
Bootstrap support for A3GFW6 as seed ortholog is 100%.

Group of orthologs #1952. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 S.stipitis:62

H3AAG9              	100.00%		A3LU66              	100.00%
Bootstrap support for H3AAG9 as seed ortholog is 100%.
Bootstrap support for A3LU66 as seed ortholog is 100%.

Group of orthologs #1953. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 S.stipitis:62

H3AJZ9              	100.00%		A3GI44              	100.00%
Bootstrap support for H3AJZ9 as seed ortholog is 100%.
Bootstrap support for A3GI44 as seed ortholog is 100%.

Group of orthologs #1954. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 S.stipitis:62

H3APP2              	100.00%		A3GFP8              	100.00%
Bootstrap support for H3APP2 as seed ortholog is 100%.
Bootstrap support for A3GFP8 as seed ortholog is 100%.

Group of orthologs #1955. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 S.stipitis:62

H3ANQ3              	100.00%		A3LNC7              	100.00%
Bootstrap support for H3ANQ3 as seed ortholog is 100%.
Bootstrap support for A3LNC7 as seed ortholog is 100%.

Group of orthologs #1956. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 S.stipitis:62

H3B160              	100.00%		A3GF31              	100.00%
Bootstrap support for H3B160 as seed ortholog is 100%.
Bootstrap support for A3GF31 as seed ortholog is 100%.

Group of orthologs #1957. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 S.stipitis:62

H3ALB2              	100.00%		A3LX64              	100.00%
Bootstrap support for H3ALB2 as seed ortholog is 100%.
Bootstrap support for A3LX64 as seed ortholog is 100%.

Group of orthologs #1958. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 S.stipitis:62

H3ASD7              	100.00%		A3M0K8              	100.00%
Bootstrap support for H3ASD7 as seed ortholog is 100%.
Bootstrap support for A3M0K8 as seed ortholog is 100%.

Group of orthologs #1959. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 S.stipitis:62

H3B068              	100.00%		A3LU01              	100.00%
Bootstrap support for H3B068 as seed ortholog is 100%.
Bootstrap support for A3LU01 as seed ortholog is 100%.

Group of orthologs #1960. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 S.stipitis:62

H3B7Z0              	100.00%		A3LPW6              	100.00%
Bootstrap support for H3B7Z0 as seed ortholog is 100%.
Bootstrap support for A3LPW6 as seed ortholog is 100%.

Group of orthologs #1961. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 S.stipitis:62

H3BI02              	100.00%		A3GFE0              	100.00%
Bootstrap support for H3BI02 as seed ortholog is 100%.
Bootstrap support for A3GFE0 as seed ortholog is 100%.

Group of orthologs #1962. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 S.stipitis:62

M3XK51              	100.00%		A3LSY0              	100.00%
Bootstrap support for M3XK51 as seed ortholog is 100%.
Bootstrap support for A3LSY0 as seed ortholog is 100%.

Group of orthologs #1963. Best score 62 bits
Score difference with first non-orthologous sequence - L.chalumnae:62 S.stipitis:62

H3BDB2              	100.00%		A3M0J2              	100.00%
Bootstrap support for H3BDB2 as seed ortholog is 100%.
Bootstrap support for A3M0J2 as seed ortholog is 100%.

Group of orthologs #1964. Best score 61 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 S.stipitis:61

H2ZZQ3              	100.00%		A3LYJ9              	100.00%
H3ACE1              	100.00%		A3LXT5              	100.00%
Bootstrap support for H2ZZQ3 as seed ortholog is 100%.
Bootstrap support for H3ACE1 as seed ortholog is 100%.
Bootstrap support for A3LYJ9 as seed ortholog is 100%.
Bootstrap support for A3LXT5 as seed ortholog is 100%.

Group of orthologs #1965. Best score 61 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 S.stipitis:61

H3AZZ9              	100.00%		A3LQG8              	100.00%
H3B7H7              	36.94%		
H3AX93              	31.34%		
Bootstrap support for H3AZZ9 as seed ortholog is 100%.
Bootstrap support for A3LQG8 as seed ortholog is 100%.

Group of orthologs #1966. Best score 61 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 S.stipitis:61

H3AAH2              	100.00%		A3LT04              	100.00%
H3ASK1              	26.24%		
Bootstrap support for H3AAH2 as seed ortholog is 100%.
Bootstrap support for A3LT04 as seed ortholog is 100%.

Group of orthologs #1967. Best score 61 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 S.stipitis:61

M3XIX3              	100.00%		A3LU35              	100.00%
                    	       		A3LU36              	27.31%
Bootstrap support for M3XIX3 as seed ortholog is 100%.
Bootstrap support for A3LU35 as seed ortholog is 100%.

Group of orthologs #1968. Best score 61 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 S.stipitis:61

H3ABS3              	100.00%		A3GEY8              	100.00%
Bootstrap support for H3ABS3 as seed ortholog is 100%.
Bootstrap support for A3GEY8 as seed ortholog is 100%.

Group of orthologs #1969. Best score 61 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 S.stipitis:61

H3A6D5              	100.00%		A3LTY2              	100.00%
Bootstrap support for H3A6D5 as seed ortholog is 100%.
Bootstrap support for A3LTY2 as seed ortholog is 100%.

Group of orthologs #1970. Best score 61 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 S.stipitis:61

H3APL1              	100.00%		A3GFD2              	100.00%
Bootstrap support for H3APL1 as seed ortholog is 100%.
Bootstrap support for A3GFD2 as seed ortholog is 100%.

Group of orthologs #1971. Best score 61 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 S.stipitis:61

H3AF53              	100.00%		A3LTP6              	100.00%
Bootstrap support for H3AF53 as seed ortholog is 100%.
Bootstrap support for A3LTP6 as seed ortholog is 100%.

Group of orthologs #1972. Best score 61 bits
Score difference with first non-orthologous sequence - L.chalumnae:61 S.stipitis:61

H3BAI4              	100.00%		A3LMV9              	100.00%
Bootstrap support for H3BAI4 as seed ortholog is 100%.
Bootstrap support for A3LMV9 as seed ortholog is 100%.

Group of orthologs #1973. Best score 60 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 S.stipitis:60

H3A0I6              	100.00%		A3LQU8              	100.00%
H3AAC6              	68.57%		A3LPJ3              	14.86%
Bootstrap support for H3A0I6 as seed ortholog is 100%.
Bootstrap support for A3LQU8 as seed ortholog is 100%.

Group of orthologs #1974. Best score 60 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 S.stipitis:13

H3BC91              	100.00%		A3GET6              	100.00%
H3B836              	20.00%		
Bootstrap support for H3BC91 as seed ortholog is 100%.
Bootstrap support for A3GET6 as seed ortholog is 75%.

Group of orthologs #1975. Best score 60 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 S.stipitis:60

H3BER5              	100.00%		A3LTB9              	100.00%
H3BFH3              	44.34%		
Bootstrap support for H3BER5 as seed ortholog is 100%.
Bootstrap support for A3LTB9 as seed ortholog is 100%.

Group of orthologs #1976. Best score 60 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 S.stipitis:60

H3AWK8              	100.00%		A3GGI7              	100.00%
Bootstrap support for H3AWK8 as seed ortholog is 100%.
Bootstrap support for A3GGI7 as seed ortholog is 100%.

Group of orthologs #1977. Best score 60 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 S.stipitis:60

H3B3C7              	100.00%		A3GHX3              	100.00%
Bootstrap support for H3B3C7 as seed ortholog is 100%.
Bootstrap support for A3GHX3 as seed ortholog is 100%.

Group of orthologs #1978. Best score 60 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 S.stipitis:60

H3BFU9              	100.00%		A3GG82              	100.00%
Bootstrap support for H3BFU9 as seed ortholog is 100%.
Bootstrap support for A3GG82 as seed ortholog is 100%.

Group of orthologs #1979. Best score 60 bits
Score difference with first non-orthologous sequence - L.chalumnae:60 S.stipitis:60

H3BFM9              	100.00%		A3LUC3              	100.00%
Bootstrap support for H3BFM9 as seed ortholog is 100%.
Bootstrap support for A3LUC3 as seed ortholog is 100%.

Group of orthologs #1980. Best score 59 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 S.stipitis:59

H3B2G4              	100.00%		A3LU09              	100.00%
H3BEC2              	35.68%		
H2ZWK1              	18.31%		
H3B4Q8              	7.62%		
Bootstrap support for H3B2G4 as seed ortholog is 100%.
Bootstrap support for A3LU09 as seed ortholog is 100%.

Group of orthologs #1981. Best score 59 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 S.stipitis:59

H3AV87              	100.00%		A3LV80              	100.00%
                    	       		A3LUP9              	53.49%
                    	       		A3LV81              	47.18%
Bootstrap support for H3AV87 as seed ortholog is 100%.
Bootstrap support for A3LV80 as seed ortholog is 100%.

Group of orthologs #1982. Best score 59 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 S.stipitis:59

H3BI54              	100.00%		A3LQQ2              	100.00%
H3B0N2              	22.46%		A3LPP0              	8.63%
Bootstrap support for H3BI54 as seed ortholog is 100%.
Bootstrap support for A3LQQ2 as seed ortholog is 100%.

Group of orthologs #1983. Best score 59 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 S.stipitis:59

H3AF77              	100.00%		A3LRF4              	100.00%
Bootstrap support for H3AF77 as seed ortholog is 100%.
Bootstrap support for A3LRF4 as seed ortholog is 100%.

Group of orthologs #1984. Best score 59 bits
Score difference with first non-orthologous sequence - L.chalumnae:59 S.stipitis:59

H3BDW8              	100.00%		A3GG61              	100.00%
Bootstrap support for H3BDW8 as seed ortholog is 100%.
Bootstrap support for A3GG61 as seed ortholog is 100%.

Group of orthologs #1985. Best score 58 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 S.stipitis:58

H3BHB6              	100.00%		A3LWT4              	100.00%
M3XI41              	29.62%		
H3B4T6              	23.32%		
Bootstrap support for H3BHB6 as seed ortholog is 100%.
Bootstrap support for A3LWT4 as seed ortholog is 100%.

Group of orthologs #1986. Best score 58 bits
Score difference with first non-orthologous sequence - L.chalumnae:58 S.stipitis:58

H2ZRM0              	100.00%		A3GEX2              	100.00%
Bootstrap support for H2ZRM0 as seed ortholog is 100%.
Bootstrap support for A3GEX2 as seed ortholog is 100%.

Group of orthologs #1987. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:1 S.stipitis:57

H3B631              	100.00%		A3LQZ7              	100.00%
H3A7T7              	30.91%		
H3AG48              	28.71%		
H3A5R9              	13.46%		
H3AVL8              	8.93%		
Bootstrap support for H3B631 as seed ortholog is 67%.
Alternative seed ortholog is H2ZY83 (1 bits away from this cluster)
Bootstrap support for A3LQZ7 as seed ortholog is 100%.

Group of orthologs #1988. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 S.stipitis:4

H3A226              	100.00%		A3LP91              	100.00%
H3B5J1              	100.00%		A3LQE2              	100.00%
H3AD42              	63.57%		
Bootstrap support for H3A226 as seed ortholog is 100%.
Bootstrap support for H3B5J1 as seed ortholog is 100%.
Bootstrap support for A3LP91 as seed ortholog is 57%.
Alternative seed ortholog is A3LZY5 (4 bits away from this cluster)
Bootstrap support for A3LQE2 as seed ortholog is 100%.

Group of orthologs #1989. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 S.stipitis:57

H3AUK0              	100.00%		A3LVQ7              	100.00%
H2ZT12              	39.61%		
H2ZS00              	29.62%		
Bootstrap support for H3AUK0 as seed ortholog is 100%.
Bootstrap support for A3LVQ7 as seed ortholog is 100%.

Group of orthologs #1990. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 S.stipitis:57

H3AIU6              	100.00%		A3LRP0              	100.00%
H3BBG7              	60.59%		
Bootstrap support for H3AIU6 as seed ortholog is 100%.
Bootstrap support for A3LRP0 as seed ortholog is 100%.

Group of orthologs #1991. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 S.stipitis:57

H3AVA3              	100.00%		A3LUZ1              	100.00%
H3BII4              	72.29%		
Bootstrap support for H3AVA3 as seed ortholog is 100%.
Bootstrap support for A3LUZ1 as seed ortholog is 100%.

Group of orthologs #1992. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 S.stipitis:57

H2ZTX4              	100.00%		A3LU32              	100.00%
Bootstrap support for H2ZTX4 as seed ortholog is 100%.
Bootstrap support for A3LU32 as seed ortholog is 100%.

Group of orthologs #1993. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 S.stipitis:57

H3A8M9              	100.00%		A3LPS2              	100.00%
Bootstrap support for H3A8M9 as seed ortholog is 100%.
Bootstrap support for A3LPS2 as seed ortholog is 100%.

Group of orthologs #1994. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 S.stipitis:57

H3A797              	100.00%		A3LVH3              	100.00%
Bootstrap support for H3A797 as seed ortholog is 100%.
Bootstrap support for A3LVH3 as seed ortholog is 100%.

Group of orthologs #1995. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 S.stipitis:57

H3AMN9              	100.00%		A3GGE1              	100.00%
Bootstrap support for H3AMN9 as seed ortholog is 100%.
Bootstrap support for A3GGE1 as seed ortholog is 100%.

Group of orthologs #1996. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 S.stipitis:57

H3AGY1              	100.00%		A3LSV6              	100.00%
Bootstrap support for H3AGY1 as seed ortholog is 100%.
Bootstrap support for A3LSV6 as seed ortholog is 100%.

Group of orthologs #1997. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 S.stipitis:57

H3ATL7              	100.00%		A3LXC0              	100.00%
Bootstrap support for H3ATL7 as seed ortholog is 100%.
Bootstrap support for A3LXC0 as seed ortholog is 100%.

Group of orthologs #1998. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 S.stipitis:57

H3BB34              	100.00%		A3GI86              	100.00%
Bootstrap support for H3BB34 as seed ortholog is 100%.
Bootstrap support for A3GI86 as seed ortholog is 100%.

Group of orthologs #1999. Best score 57 bits
Score difference with first non-orthologous sequence - L.chalumnae:57 S.stipitis:57

H3B9C5              	100.00%		A3LZM5              	100.00%
Bootstrap support for H3B9C5 as seed ortholog is 100%.
Bootstrap support for A3LZM5 as seed ortholog is 100%.

Group of orthologs #2000. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 S.stipitis:56

H3ACP1              	100.00%		A3LUK6              	100.00%
H2ZU99              	25.12%		A3LSR2              	10.59%
Bootstrap support for H3ACP1 as seed ortholog is 100%.
Bootstrap support for A3LUK6 as seed ortholog is 100%.

Group of orthologs #2001. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 S.stipitis:56

H3AQ52              	100.00%		A3LUA5              	100.00%
H3AGM9              	47.72%		A3GGR1              	83.25%
Bootstrap support for H3AQ52 as seed ortholog is 100%.
Bootstrap support for A3LUA5 as seed ortholog is 100%.

Group of orthologs #2002. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:2 S.stipitis:56

H3B1G4              	100.00%		A3GGI2              	100.00%
                    	       		A3LW46              	11.76%
Bootstrap support for H3B1G4 as seed ortholog is 44%.
Alternative seed ortholog is H3AT62 (2 bits away from this cluster)
Bootstrap support for A3GGI2 as seed ortholog is 100%.

Group of orthologs #2003. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 S.stipitis:56

H2ZVJ6              	100.00%		A3LPU8              	100.00%
Bootstrap support for H2ZVJ6 as seed ortholog is 100%.
Bootstrap support for A3LPU8 as seed ortholog is 100%.

Group of orthologs #2004. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 S.stipitis:56

H2ZW86              	100.00%		A3LUS2              	100.00%
Bootstrap support for H2ZW86 as seed ortholog is 100%.
Bootstrap support for A3LUS2 as seed ortholog is 100%.

Group of orthologs #2005. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 S.stipitis:56

H3A345              	100.00%		A3LWB8              	100.00%
Bootstrap support for H3A345 as seed ortholog is 100%.
Bootstrap support for A3LWB8 as seed ortholog is 100%.

Group of orthologs #2006. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 S.stipitis:56

H3AMF2              	100.00%		A3LQN0              	100.00%
Bootstrap support for H3AMF2 as seed ortholog is 100%.
Bootstrap support for A3LQN0 as seed ortholog is 100%.

Group of orthologs #2007. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 S.stipitis:56

H3AUF1              	100.00%		A3LRT0              	100.00%
Bootstrap support for H3AUF1 as seed ortholog is 100%.
Bootstrap support for A3LRT0 as seed ortholog is 100%.

Group of orthologs #2008. Best score 56 bits
Score difference with first non-orthologous sequence - L.chalumnae:56 S.stipitis:56

H3B004              	100.00%		A3LSH9              	100.00%
Bootstrap support for H3B004 as seed ortholog is 100%.
Bootstrap support for A3LSH9 as seed ortholog is 100%.

Group of orthologs #2009. Best score 55 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 S.stipitis:55

H3A5V2              	100.00%		A3LXQ3              	100.00%
Bootstrap support for H3A5V2 as seed ortholog is 100%.
Bootstrap support for A3LXQ3 as seed ortholog is 100%.

Group of orthologs #2010. Best score 55 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 S.stipitis:55

H3B6V2              	100.00%		A3GGJ8              	100.00%
Bootstrap support for H3B6V2 as seed ortholog is 100%.
Bootstrap support for A3GGJ8 as seed ortholog is 100%.

Group of orthologs #2011. Best score 55 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 S.stipitis:55

H3B3N4              	100.00%		A3LRA9              	100.00%
Bootstrap support for H3B3N4 as seed ortholog is 100%.
Bootstrap support for A3LRA9 as seed ortholog is 100%.

Group of orthologs #2012. Best score 55 bits
Score difference with first non-orthologous sequence - L.chalumnae:55 S.stipitis:55

H3BIT2              	100.00%		A3LWG1              	100.00%
Bootstrap support for H3BIT2 as seed ortholog is 100%.
Bootstrap support for A3LWG1 as seed ortholog is 100%.

Group of orthologs #2013. Best score 54 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 S.stipitis:54

H3BAK9              	100.00%		A3GGF0              	100.00%
Bootstrap support for H3BAK9 as seed ortholog is 100%.
Bootstrap support for A3GGF0 as seed ortholog is 100%.

Group of orthologs #2014. Best score 54 bits
Score difference with first non-orthologous sequence - L.chalumnae:54 S.stipitis:54

M3XKC9              	100.00%		A3LMX9              	100.00%
Bootstrap support for M3XKC9 as seed ortholog is 100%.
Bootstrap support for A3LMX9 as seed ortholog is 100%.

Group of orthologs #2015. Best score 53 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 S.stipitis:53

H3AX01              	100.00%		A3LZJ3              	100.00%
H3A544              	57.78%		A3LUU9              	28.86%
H3A9P7              	57.78%		
Bootstrap support for H3AX01 as seed ortholog is 100%.
Bootstrap support for A3LZJ3 as seed ortholog is 100%.

Group of orthologs #2016. Best score 53 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 S.stipitis:53

H3A792              	100.00%		A3LVS1              	100.00%
Bootstrap support for H3A792 as seed ortholog is 100%.
Bootstrap support for A3LVS1 as seed ortholog is 100%.

Group of orthologs #2017. Best score 53 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 S.stipitis:53

H3AYL3              	100.00%		A3GI04              	100.00%
Bootstrap support for H3AYL3 as seed ortholog is 100%.
Bootstrap support for A3GI04 as seed ortholog is 100%.

Group of orthologs #2018. Best score 53 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 S.stipitis:53

H3AXE9              	100.00%		A3LR74              	100.00%
Bootstrap support for H3AXE9 as seed ortholog is 100%.
Bootstrap support for A3LR74 as seed ortholog is 100%.

Group of orthologs #2019. Best score 53 bits
Score difference with first non-orthologous sequence - L.chalumnae:53 S.stipitis:53

H3B7L1              	100.00%		A3GGV5              	100.00%
Bootstrap support for H3B7L1 as seed ortholog is 100%.
Bootstrap support for A3GGV5 as seed ortholog is 100%.

Group of orthologs #2020. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 S.stipitis:52

H3B640              	100.00%		A3LZY2              	100.00%
                    	       		A3LPM9              	14.57%
                    	       		A3LXL4              	8.18%
Bootstrap support for H3B640 as seed ortholog is 100%.
Bootstrap support for A3LZY2 as seed ortholog is 100%.

Group of orthologs #2021. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 S.stipitis:52

H3BDX1              	100.00%		A3LPC7              	100.00%
H3A7P0              	6.41%		
Bootstrap support for H3BDX1 as seed ortholog is 100%.
Bootstrap support for A3LPC7 as seed ortholog is 100%.

Group of orthologs #2022. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 S.stipitis:52

H3A4S3              	100.00%		A3GI77              	100.00%
Bootstrap support for H3A4S3 as seed ortholog is 100%.
Bootstrap support for A3GI77 as seed ortholog is 100%.

Group of orthologs #2023. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 S.stipitis:52

H3A9U6              	100.00%		A3GHI5              	100.00%
Bootstrap support for H3A9U6 as seed ortholog is 100%.
Bootstrap support for A3GHI5 as seed ortholog is 100%.

Group of orthologs #2024. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 S.stipitis:52

H3AG46              	100.00%		A3LWS5              	100.00%
Bootstrap support for H3AG46 as seed ortholog is 100%.
Bootstrap support for A3LWS5 as seed ortholog is 100%.

Group of orthologs #2025. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 S.stipitis:52

H3AM00              	100.00%		A3LS66              	100.00%
Bootstrap support for H3AM00 as seed ortholog is 100%.
Bootstrap support for A3LS66 as seed ortholog is 100%.

Group of orthologs #2026. Best score 52 bits
Score difference with first non-orthologous sequence - L.chalumnae:52 S.stipitis:52

H3BC99              	100.00%		A3LQD5              	100.00%
Bootstrap support for H3BC99 as seed ortholog is 100%.
Bootstrap support for A3LQD5 as seed ortholog is 100%.

Group of orthologs #2027. Best score 51 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 S.stipitis:51

H3ATF2              	100.00%		A3M0C6              	100.00%
H3AUV8              	36.43%		
H2ZRY0              	7.01%		
H3BFF2              	7.01%		
Bootstrap support for H3ATF2 as seed ortholog is 100%.
Bootstrap support for A3M0C6 as seed ortholog is 100%.

Group of orthologs #2028. Best score 51 bits
Score difference with first non-orthologous sequence - L.chalumnae:4 S.stipitis:51

H3AD63              	100.00%		A3LT88              	100.00%
H3A5H5              	39.63%		
Bootstrap support for H3AD63 as seed ortholog is 53%.
Alternative seed ortholog is H3B264 (4 bits away from this cluster)
Bootstrap support for A3LT88 as seed ortholog is 100%.

Group of orthologs #2029. Best score 51 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 S.stipitis:51

H3B9Y5              	100.00%		A3LZC0              	100.00%
H3A456              	26.34%		
Bootstrap support for H3B9Y5 as seed ortholog is 100%.
Bootstrap support for A3LZC0 as seed ortholog is 100%.

Group of orthologs #2030. Best score 51 bits
Score difference with first non-orthologous sequence - L.chalumnae:51 S.stipitis:51

H3A9I8              	100.00%		A3M0H7              	100.00%
Bootstrap support for H3A9I8 as seed ortholog is 100%.
Bootstrap support for A3M0H7 as seed ortholog is 100%.

Group of orthologs #2031. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 S.stipitis:50

H3AZ74              	100.00%		A3LPD2              	100.00%
H3B361              	18.56%		
Bootstrap support for H3AZ74 as seed ortholog is 100%.
Bootstrap support for A3LPD2 as seed ortholog is 100%.

Group of orthologs #2032. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 S.stipitis:50

H3B3E6              	100.00%		A3LTJ1              	100.00%
                    	       		A3LNT9              	19.10%
Bootstrap support for H3B3E6 as seed ortholog is 100%.
Bootstrap support for A3LTJ1 as seed ortholog is 100%.

Group of orthologs #2033. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 S.stipitis:50

H3AJB1              	100.00%		A3LTC7              	100.00%
Bootstrap support for H3AJB1 as seed ortholog is 100%.
Bootstrap support for A3LTC7 as seed ortholog is 100%.

Group of orthologs #2034. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 S.stipitis:50

H3ASP6              	100.00%		A3GHD4              	100.00%
Bootstrap support for H3ASP6 as seed ortholog is 100%.
Bootstrap support for A3GHD4 as seed ortholog is 100%.

Group of orthologs #2035. Best score 50 bits
Score difference with first non-orthologous sequence - L.chalumnae:50 S.stipitis:50

H3B0R1              	100.00%		A3M054              	100.00%
Bootstrap support for H3B0R1 as seed ortholog is 100%.
Bootstrap support for A3M054 as seed ortholog is 100%.

Group of orthologs #2036. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 S.stipitis:49

M3XHC3              	100.00%		A3GF40              	100.00%
H3B5V4              	51.23%		A3GIC2              	46.60%
H3AW83              	31.76%		A3GIC3              	13.58%
H3BDJ0              	26.02%		A3LT71              	12.55%
H2ZRU4              	23.46%		A3GG68              	11.93%
                    	       		A3LWY6              	9.67%
Bootstrap support for M3XHC3 as seed ortholog is 100%.
Bootstrap support for A3GF40 as seed ortholog is 100%.

Group of orthologs #2037. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 S.stipitis:49

H3A9X4              	100.00%		A3LPD6              	100.00%
H2ZVG1              	24.05%		
H3B1A5              	22.34%		
H3AY74              	11.68%		
Bootstrap support for H3A9X4 as seed ortholog is 100%.
Bootstrap support for A3LPD6 as seed ortholog is 100%.

Group of orthologs #2038. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 S.stipitis:49

H3AD77              	100.00%		A3LYL5              	100.00%
H3A7H5              	38.63%		
H3B6Z8              	38.63%		
H2ZWD3              	34.36%		
Bootstrap support for H3AD77 as seed ortholog is 100%.
Bootstrap support for A3LYL5 as seed ortholog is 100%.

Group of orthologs #2039. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:5 S.stipitis:49

H3AWW3              	100.00%		A3LUV9              	100.00%
H2ZXI6              	12.72%		
H3AKE9              	11.66%		
H3BHB3              	8.30%		
Bootstrap support for H3AWW3 as seed ortholog is 46%.
Alternative seed ortholog is H2ZXZ2 (5 bits away from this cluster)
Bootstrap support for A3LUV9 as seed ortholog is 100%.

Group of orthologs #2040. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 S.stipitis:49

H2ZYD1              	100.00%		A3LX77              	100.00%
H2ZXN5              	25.34%		
Bootstrap support for H2ZYD1 as seed ortholog is 100%.
Bootstrap support for A3LX77 as seed ortholog is 100%.

Group of orthologs #2041. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 S.stipitis:49

H2ZWN6              	100.00%		A3LWU5              	100.00%
Bootstrap support for H2ZWN6 as seed ortholog is 100%.
Bootstrap support for A3LWU5 as seed ortholog is 100%.

Group of orthologs #2042. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 S.stipitis:49

H3AZJ9              	100.00%		A3GG85              	100.00%
Bootstrap support for H3AZJ9 as seed ortholog is 100%.
Bootstrap support for A3GG85 as seed ortholog is 100%.

Group of orthologs #2043. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 S.stipitis:49

H3B787              	100.00%		A3GHT8              	100.00%
Bootstrap support for H3B787 as seed ortholog is 100%.
Bootstrap support for A3GHT8 as seed ortholog is 100%.

Group of orthologs #2044. Best score 49 bits
Score difference with first non-orthologous sequence - L.chalumnae:49 S.stipitis:49

H3B4X7              	100.00%		A3LR77              	100.00%
Bootstrap support for H3B4X7 as seed ortholog is 100%.
Bootstrap support for A3LR77 as seed ortholog is 100%.

Group of orthologs #2045. Best score 48 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 S.stipitis:48

H3A959              	100.00%		A3LTU7              	100.00%
Bootstrap support for H3A959 as seed ortholog is 100%.
Bootstrap support for A3LTU7 as seed ortholog is 100%.

Group of orthologs #2046. Best score 48 bits
Score difference with first non-orthologous sequence - L.chalumnae:48 S.stipitis:48

H3ADU3              	100.00%		A3LV09              	100.00%
Bootstrap support for H3ADU3 as seed ortholog is 100%.
Bootstrap support for A3LV09 as seed ortholog is 100%.

Group of orthologs #2047. Best score 47 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 S.stipitis:47

H3BFW4              	100.00%		A3LRP3              	100.00%
H3AIK8              	45.50%		
H2ZVR2              	39.15%		
H2ZTX9              	32.80%		
Bootstrap support for H3BFW4 as seed ortholog is 100%.
Bootstrap support for A3LRP3 as seed ortholog is 100%.

Group of orthologs #2048. Best score 47 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 S.stipitis:47

H3AVQ3              	100.00%		A3LMW2              	100.00%
H3AAL5              	54.97%		
Bootstrap support for H3AVQ3 as seed ortholog is 100%.
Bootstrap support for A3LMW2 as seed ortholog is 100%.

Group of orthologs #2049. Best score 47 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 S.stipitis:47

H3A641              	100.00%		A3LN96              	100.00%
Bootstrap support for H3A641 as seed ortholog is 100%.
Bootstrap support for A3LN96 as seed ortholog is 100%.

Group of orthologs #2050. Best score 47 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 S.stipitis:47

H3ALI4              	100.00%		A3LWF5              	100.00%
Bootstrap support for H3ALI4 as seed ortholog is 100%.
Bootstrap support for A3LWF5 as seed ortholog is 100%.

Group of orthologs #2051. Best score 47 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 S.stipitis:47

H3B866              	100.00%		A3GH42              	100.00%
Bootstrap support for H3B866 as seed ortholog is 100%.
Bootstrap support for A3GH42 as seed ortholog is 100%.

Group of orthologs #2052. Best score 47 bits
Score difference with first non-orthologous sequence - L.chalumnae:47 S.stipitis:47

H3BBW9              	100.00%		A3LP92              	100.00%
Bootstrap support for H3BBW9 as seed ortholog is 100%.
Bootstrap support for A3LP92 as seed ortholog is 100%.

Group of orthologs #2053. Best score 46 bits
Score difference with first non-orthologous sequence - L.chalumnae:3 S.stipitis:46

H3AGA0              	100.00%		A3LYB7              	100.00%
Bootstrap support for H3AGA0 as seed ortholog is 57%.
Alternative seed ortholog is H3AVU1 (3 bits away from this cluster)
Bootstrap support for A3LYB7 as seed ortholog is 100%.

Group of orthologs #2054. Best score 45 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 S.stipitis:45

H3AVQ7              	100.00%		A3LX58              	100.00%
H3A6N3              	31.39%		
Bootstrap support for H3AVQ7 as seed ortholog is 100%.
Bootstrap support for A3LX58 as seed ortholog is 100%.

Group of orthologs #2055. Best score 45 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 S.stipitis:45

H2ZUT8              	100.00%		A3LS20              	100.00%
Bootstrap support for H2ZUT8 as seed ortholog is 100%.
Bootstrap support for A3LS20 as seed ortholog is 100%.

Group of orthologs #2056. Best score 45 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 S.stipitis:45

H3AH57              	100.00%		A3GFN1              	100.00%
Bootstrap support for H3AH57 as seed ortholog is 100%.
Bootstrap support for A3GFN1 as seed ortholog is 100%.

Group of orthologs #2057. Best score 45 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 S.stipitis:45

H3BD02              	100.00%		A3LNE9              	100.00%
Bootstrap support for H3BD02 as seed ortholog is 100%.
Bootstrap support for A3LNE9 as seed ortholog is 100%.

Group of orthologs #2058. Best score 45 bits
Score difference with first non-orthologous sequence - L.chalumnae:45 S.stipitis:45

H3BEE6              	100.00%		A3LQF3              	100.00%
Bootstrap support for H3BEE6 as seed ortholog is 100%.
Bootstrap support for A3LQF3 as seed ortholog is 100%.

Group of orthologs #2059. Best score 44 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 S.stipitis:44

H3A601              	100.00%		A3GFC6              	100.00%
H3A9T1              	43.74%		
Bootstrap support for H3A601 as seed ortholog is 100%.
Bootstrap support for A3GFC6 as seed ortholog is 100%.

Group of orthologs #2060. Best score 44 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 S.stipitis:44

H3ADC9              	100.00%		A3M004              	100.00%
H3BEH4              	100.00%		
Bootstrap support for H3ADC9 as seed ortholog is 100%.
Bootstrap support for H3BEH4 as seed ortholog is 100%.
Bootstrap support for A3M004 as seed ortholog is 100%.

Group of orthologs #2061. Best score 44 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 S.stipitis:44

H3B851              	100.00%		A3LXI3              	100.00%
                    	       		A3LQM9              	34.86%
Bootstrap support for H3B851 as seed ortholog is 100%.
Bootstrap support for A3LXI3 as seed ortholog is 100%.

Group of orthologs #2062. Best score 44 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 S.stipitis:44

H3A1C0              	100.00%		A3LR98              	100.00%
Bootstrap support for H3A1C0 as seed ortholog is 100%.
Bootstrap support for A3LR98 as seed ortholog is 100%.

Group of orthologs #2063. Best score 44 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 S.stipitis:44

H3AHD6              	100.00%		A3LQ94              	100.00%
Bootstrap support for H3AHD6 as seed ortholog is 100%.
Bootstrap support for A3LQ94 as seed ortholog is 100%.

Group of orthologs #2064. Best score 44 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 S.stipitis:44

H3AJF1              	100.00%		A3LZP9              	100.00%
Bootstrap support for H3AJF1 as seed ortholog is 100%.
Bootstrap support for A3LZP9 as seed ortholog is 100%.

Group of orthologs #2065. Best score 44 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 S.stipitis:44

H3BEU6              	100.00%		A3LPB2              	100.00%
Bootstrap support for H3BEU6 as seed ortholog is 100%.
Bootstrap support for A3LPB2 as seed ortholog is 100%.

Group of orthologs #2066. Best score 44 bits
Score difference with first non-orthologous sequence - L.chalumnae:44 S.stipitis:44

H3BEZ7              	100.00%		A3LSE7              	100.00%
Bootstrap support for H3BEZ7 as seed ortholog is 100%.
Bootstrap support for A3LSE7 as seed ortholog is 100%.

Group of orthologs #2067. Best score 43 bits
Score difference with first non-orthologous sequence - L.chalumnae:43 S.stipitis:43

H3AAY6              	100.00%		A3M0L8              	100.00%
H3ASU5              	9.48%		
H3A1T2              	6.86%		
H3B7D3              	5.88%		
Bootstrap support for H3AAY6 as seed ortholog is 100%.
Bootstrap support for A3M0L8 as seed ortholog is 100%.

Group of orthologs #2068. Best score 42 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 S.stipitis:42

H2ZS72              	100.00%		A3GF00              	100.00%
Bootstrap support for H2ZS72 as seed ortholog is 100%.
Bootstrap support for A3GF00 as seed ortholog is 100%.

Group of orthologs #2069. Best score 42 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 S.stipitis:42

H3AVZ7              	100.00%		A3GGD1              	100.00%
Bootstrap support for H3AVZ7 as seed ortholog is 100%.
Bootstrap support for A3GGD1 as seed ortholog is 100%.

Group of orthologs #2070. Best score 42 bits
Score difference with first non-orthologous sequence - L.chalumnae:42 S.stipitis:42

H3AUI1              	100.00%		A3LZF0              	100.00%
Bootstrap support for H3AUI1 as seed ortholog is 100%.
Bootstrap support for A3LZF0 as seed ortholog is 100%.